The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	0	65104	4110592	tRNA,protease,transposase	Natrialba_phage(12.5%)	56	NA	NA
AZX30985.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AZX30986.1|1916_2609_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA	NA
AZX30987.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
AZX30988.1|3409_4171_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX30989.1|4214_5132_+	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
AZX30990.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
AZX30991.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AZX30992.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
AZX30993.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AZX30994.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AZX30995.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
AZX30996.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AZX30997.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
AZX30998.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
AZX34377.1|20126_20531_-	lipoprotein	NA	NA	NA	NA	NA
AZX30999.1|20771_21947_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31000.1|21943_22894_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZX31001.1|25401_26508_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
AZX31002.1|27519_28335_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX31003.1|28331_29282_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31004.1|29363_29699_-	CoA transferase	NA	NA	NA	NA	NA
AZX31005.1|29723_30158_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31006.1|30190_31417_-	thiolase family protein	NA	NA	NA	NA	NA
AZX31007.1|31413_31911_-	dehydratase	NA	NA	NA	NA	NA
AZX34378.1|32118_33027_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31008.1|33212_34055_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX31009.1|34097_35519_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX31010.1|35674_36625_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31011.1|36621_37812_-	MFS transporter	NA	NA	NA	NA	NA
AZX31012.1|37998_38973_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AZX31013.1|38974_41113_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZX31014.1|41109_41649_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AZX31015.1|41652_42381_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZX31016.1|42367_43261_+	M48 family peptidase	NA	NA	NA	NA	NA
AZX31017.1|43331_43727_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
AZX31018.1|43736_44267_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
AZX31019.1|44395_44695_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
AZX31020.1|44712_45663_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31021.1|46162_46798_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31022.1|46769_47006_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZX31023.1|47133_48027_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31024.1|49196_50444_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AZX31025.1|50440_51055_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
AZX31026.1|51190_52141_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31027.1|52183_53440_+	MFS transporter	NA	NA	NA	NA	NA
AZX31028.1|54671_55406_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
AZX31029.1|55411_56002_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
AZX31030.1|56026_56716_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX31031.1|56712_57474_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX31032.1|57553_58453_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX31033.1|58546_59497_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31034.1|60297_61524_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AZX31035.1|61523_61943_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX31036.1|62126_63068_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31037.1|63491_64328_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31038.1|64522_65104_-|protease	protease	protease	NA	NA	NA	NA
>prophage 2
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	70134	123122	4110592	transposase,tRNA	Planktothrix_phage(20.0%)	51	NA	NA
AZX31043.1|70134_71085_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31044.1|71178_71493_+|transposase	transposase	transposase	NA	NA	NA	NA
AZX31045.1|72685_74593_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
AZX31046.1|74754_75375_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX31047.1|75406_75988_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
AZX31048.1|76076_76328_-	hypothetical protein	NA	NA	NA	NA	NA
AZX34379.1|76329_77079_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31049.1|77277_78687_+	signal recognition particle protein	NA	NA	NA	NA	NA
AZX31050.1|78683_79634_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34380.1|79708_80653_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31051.1|80649_82524_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
AZX31052.1|83871_84576_-	DUF2837 domain-containing protein	NA	NA	NA	NA	NA
AZX31053.1|84572_85679_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AZX31054.1|85940_86534_-	sugar transferase	NA	NA	NA	NA	NA
AZX31055.1|86530_87763_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA	NA
AZX31056.1|87780_89040_-	glycosyltransferase WbuB	NA	NA	NA	NA	NA
AZX31057.1|89063_90152_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
AZX31058.1|90159_91260_-	aminotransferase DegT	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
AZX31059.1|91263_91839_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX31060.1|91842_92895_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
AZX31061.1|93025_94033_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
AZX31062.1|94034_95321_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AZX31063.1|95337_95493_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31064.1|95517_96321_-	type III pantothenate kinase	NA	NA	NA	NA	NA
AZX31065.1|96317_97184_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AZX31066.1|97252_98389_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX31067.1|98388_99228_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
AZX31068.1|100160_100763_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31069.1|100792_101446_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX31070.1|101578_102835_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
AZX31071.1|102837_103782_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
AZX31072.1|103857_104133_+	DUF493 domain-containing protein	NA	NA	NA	NA	NA
AZX31073.1|104140_104803_+	octanoyltransferase	NA	NA	NA	NA	NA
AZX31074.1|104864_105866_+	lipoyl synthase	NA	NA	NA	NA	NA
AZX31075.1|105880_106429_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
AZX31076.1|106486_107383_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
AZX31077.1|107379_108441_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
AZX31078.1|108476_109427_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31079.1|110326_111520_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZX31080.1|111601_112231_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA	NA
AZX31081.1|112292_112976_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
AZX31082.1|112985_114668_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AZX34381.1|114955_115303_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
AZX31083.1|115393_115711_+	hypothetical protein	NA	NA	NA	NA	NA
AZX34382.1|115993_117010_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX31084.1|117085_117886_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZX31085.1|117882_118758_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZX31086.1|118768_120061_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX31087.1|120103_121144_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
AZX31088.1|121249_122071_-	phosphodiesterase	NA	NA	NA	NA	NA
AZX31089.1|122171_123122_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	165944	226455	4110592	transposase,protease,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
AZX31119.1|165944_166895_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31120.1|168338_169241_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31121.1|169218_169848_-	LemA family protein	NA	NA	NA	NA	NA
AZX31122.1|170178_171561_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
AZX31123.1|171594_172224_+	threonine transporter RhtB	NA	NA	NA	NA	NA
AZX31124.1|172272_173880_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
AZX31125.1|173904_174588_+	hypothetical protein	NA	NA	NA	NA	NA
AZX34389.1|174669_175146_-	bacterioferritin	NA	NA	NA	NA	NA
AZX31126.1|175352_176303_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31127.1|177418_177946_+	lipoprotein	NA	NA	NA	NA	NA
AZX31128.1|178037_178853_+	lipoprotein	NA	NA	NA	NA	NA
AZX31129.1|178913_179648_+	sulfurtransferase	NA	NA	NA	NA	NA
AZX31130.1|179685_181764_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
AZX31131.1|182013_182286_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31132.1|182384_183473_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AZX31133.1|183476_185381_+	outer membrane protein assembly factor	NA	NA	NA	NA	NA
AZX31134.1|185377_189052_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
AZX31135.1|189112_189676_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
AZX31136.1|189683_190106_-	glyoxalase	NA	NA	NA	NA	NA
AZX31137.1|190133_190553_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
AZX34390.1|190581_191028_-	N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
AZX31138.1|191154_191652_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31139.1|191806_194077_+	lysine decarboxylase	NA	NA	NA	NA	NA
AZX31140.1|194125_195358_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX31141.1|195456_196407_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31142.1|196452_197145_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
AZX31143.1|197141_198035_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AZX31144.1|198429_199530_+	aminomethyltransferase	NA	NA	NA	NA	NA
AZX31145.1|199611_199986_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
AZX31146.1|200045_202910_+	glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
AZX31147.1|203054_203795_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31148.1|203864_205076_+	CoA transferase	NA	NA	NA	NA	NA
AZX31149.1|205104_206073_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31150.1|206686_207637_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31151.1|207793_208117_+	PsiF repeat family protein	NA	NA	NA	NA	NA
AZX31152.1|208221_209271_-	cyclase	NA	NA	NA	NA	NA
AZX31153.1|209267_210092_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
AZX31154.1|210092_210389_-	YciI family protein	NA	NA	NA	NA	NA
AZX31155.1|210414_210690_-	muconolactone delta-isomerase	NA	NA	NA	NA	NA
AZX31156.1|210746_211391_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AZX31157.1|211390_212077_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZX34391.1|212206_213058_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31158.1|213108_213834_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX31159.1|213865_215215_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
AZX31160.1|215326_216259_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX31161.1|216716_219512_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
AZX31162.1|220105_223048_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AZX31163.1|223119_223839_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
AZX31164.1|223877_224426_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
AZX31165.1|224580_225480_+	virginiamycin B lyase	NA	NA	NA	NA	NA
AZX31166.1|225504_226455_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	234387	287975	4110592	transposase,protease,tRNA	Bacillus_phage(25.0%)	48	NA	NA
AZX31174.1|234387_235338_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31175.1|235424_236375_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31176.1|236371_237322_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31177.1|237420_238218_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX31178.1|239167_239578_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
AZX31179.1|240599_241343_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31180.1|241386_242430_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX31181.1|242600_244703_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31182.1|246113_247070_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31183.1|247088_247580_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AZX31184.1|247576_248932_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
AZX31185.1|248932_249631_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AZX31186.1|249627_250329_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
AZX31187.1|250581_251631_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
AZX31188.1|251736_252678_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AZX31189.1|252674_254564_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
AZX31190.1|254650_255289_+	hypothetical protein	NA	NA	NA	NA	NA
AZX34392.1|255431_256676_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.1e-17
AZX31191.1|256747_257284_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AZX31192.1|257435_258827_+	class II fumarate hydratase	NA	NA	NA	NA	NA
AZX31193.1|258843_259824_-	AEC family transporter	NA	NA	NA	NA	NA
AZX31194.1|259959_260943_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
AZX31195.1|261007_261907_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31196.1|262013_263768_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZX31197.1|263775_264900_-	CoA transferase	NA	NA	NA	NA	NA
AZX31198.1|264913_265894_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31199.1|266624_267575_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31200.1|268134_268680_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31201.1|268763_270383_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX31202.1|270398_271553_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AZX31203.1|271566_271692_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
AZX31204.1|271688_273440_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
AZX31205.1|273436_275116_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
AZX31206.1|275151_275727_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
AZX31207.1|276869_277148_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX31208.1|278191_279142_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31209.1|279128_279344_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31210.1|279419_279581_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AZX31211.1|279588_279729_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31212.1|280247_280697_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
AZX31213.1|280706_281318_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX31214.1|281476_282331_-	cytochrome c1	NA	NA	NA	NA	NA
AZX31215.1|282350_283733_-	cytochrome b	NA	NA	NA	NA	NA
AZX31216.1|283797_284439_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AZX31217.1|284578_285037_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
AZX31218.1|285061_285838_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
AZX34393.1|285891_287028_+	PDZ domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
AZX31219.1|287024_287975_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	391908	449417	4110592	transposase	Orpheovirus(14.29%)	50	NA	NA
AZX31318.1|391908_392859_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31319.1|392995_393913_+	reductase	NA	NA	NA	NA	NA
AZX31320.1|393909_394158_+	glutaredoxin family protein	NA	NA	NA	NA	NA
AZX31321.1|394154_395360_+	CoA transferase	NA	NA	NA	NA	NA
AZX31322.1|395432_396428_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31323.1|396450_397671_-	CoA transferase	NA	NA	NA	NA	NA
AZX31324.1|397667_398312_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31325.1|400042_400852_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX34399.1|401069_402110_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	6.1e-59
AZX31326.1|402208_403192_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31327.1|403118_403820_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31328.1|403868_404639_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX31329.1|404635_405877_-	CoA transferase	NA	NA	NA	NA	NA
AZX31330.1|405981_407688_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZX31331.1|407684_408581_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31332.1|408621_410211_-	sulfurtransferase	NA	NA	NA	NA	NA
AZX31333.1|410260_411253_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31334.1|411321_411921_-	hypothetical protein	NA	NA	NA	NA	NA
AZX34400.1|412381_413359_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31335.1|413437_414388_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31336.1|414476_415391_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX31337.1|415387_416047_+	LysE family translocator	NA	NA	NA	NA	NA
AZX31338.1|416136_417060_+	alpha/beta hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
AZX31339.1|417065_417521_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31340.1|417517_418621_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
AZX34401.1|418540_418849_+	GtrA family protein	NA	NA	NA	NA	NA
AZX31341.1|418808_420428_-	phospholipid carrier-dependent glycosyltransferase	NA	NA	NA	NA	NA
AZX31342.1|420424_421483_-	glycosyltransferase	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
AZX31343.1|421612_422107_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX31344.1|422199_423177_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31345.1|423372_424578_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
AZX31346.1|424574_426086_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX34402.1|426101_427415_-	short-chain fatty acids transporter	NA	NA	NA	NA	NA
AZX31347.1|427605_427785_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31348.1|428194_428929_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
AZX31349.1|431373_432324_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31350.1|432455_432854_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
AZX31351.1|433264_433735_-	universal stress protein	NA	NA	NA	NA	NA
AZX31352.1|433823_434168_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
AZX31353.1|434267_435668_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX31354.1|437456_437975_-	methyltransferase	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
AZX31355.1|438085_438841_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
AZX31356.1|439036_440269_+	CoA transferase	NA	NA	NA	NA	NA
AZX31357.1|440261_441047_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX31358.1|441113_442085_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31359.1|442095_443073_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31360.1|443198_444371_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX31361.1|444397_445426_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX31362.1|445491_446685_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZX31363.1|448466_449417_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	621853	722317	4110592	terminase,transposase,tail,tRNA	uncultured_Caudovirales_phage(13.79%)	111	NA	NA
AZX31515.1|621853_622804_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31516.1|623502_623886_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31517.1|623943_624546_+	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
AZX34408.1|624563_624965_-	DoxX family protein	NA	NA	NA	NA	NA
AZX31518.1|625098_625992_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31519.1|625988_626570_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AZX31520.1|627364_628099_+	arginyltransferase	NA	NA	NA	NA	NA
AZX31521.1|628139_629189_+	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA	NA
AZX31522.1|629336_629915_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA	NA
AZX31523.1|630301_631279_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
AZX31524.1|631372_635767_-	dermonecrotic toxin	NA	NA	NA	NA	NA
AZX31525.1|635967_636816_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31526.1|636974_637787_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
AZX31527.1|637842_638793_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31528.1|638891_639692_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31529.1|639753_640137_+	thioredoxin	NA	NA	NA	NA	NA
AZX31530.1|640148_641582_-	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
AZX31531.1|641788_642118_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
AZX34409.1|642120_642789_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX31532.1|643052_643973_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
AZX31533.1|644019_644232_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
AZX31534.1|644254_644677_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AZX31535.1|644693_645794_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX31536.1|645890_647408_-	peptidase	NA	NA	NA	NA	NA
AZX31537.1|647483_648323_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
AZX31538.1|648344_649226_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
AZX31539.1|649307_650402_-	porin	NA	NA	NA	NA	NA
AZX31540.1|650695_651646_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34410.1|651720_652662_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31541.1|652745_653105_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31542.1|653486_654524_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31543.1|654840_656181_+	peptidase M24 family protein	NA	NA	NA	NA	NA
AZX31544.1|656190_656643_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31545.1|656739_657921_+	monooxygenase	NA	NA	NA	NA	NA
AZX31546.1|657980_659012_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AZX31547.1|659052_659292_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZX31548.1|659361_660951_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
AZX31549.1|660950_661499_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AZX31550.1|661579_662152_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AZX31551.1|662170_663082_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
AZX31552.1|663155_664124_-	threonine/serine dehydratase	NA	NA	NA	NA	NA
AZX31553.1|664246_665320_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
AZX31554.1|665324_667145_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
AZX31555.1|667221_668172_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31556.1|668260_668596_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
AZX31557.1|668729_669380_+	carbonic anhydrase	NA	NA	NA	NA	NA
AZX31558.1|669401_670820_-	amidase	NA	NA	NA	NA	NA
AZX31559.1|670889_671645_-	hypothetical protein	NA	NA	NA	NA	NA
AZX34411.1|671613_672372_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX31560.1|672382_673264_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX31561.1|673280_673988_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
AZX31562.1|673990_674749_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
AZX31563.1|674958_676701_+	sulfite reductase	NA	NA	NA	NA	NA
AZX31564.1|676693_677218_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
AZX31565.1|677257_678052_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX31566.1|678219_679293_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31567.1|679391_680342_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31568.1|680593_680806_-	hypothetical protein	NA	NA	NA	NA	NA
AZX34412.1|680871_681483_-	LexA family transcriptional repressor	NA	NA	NA	NA	NA
AZX31569.1|681962_682283_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31570.1|682275_682974_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31571.1|682988_683210_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31572.1|683227_684178_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34413.1|684853_685303_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
AZX31573.1|685289_686567_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
AZX31574.1|686569_687988_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
AZX34414.1|688016_689072_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
AZX31575.1|689077_689320_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
AZX31576.1|689442_690045_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
AZX31577.1|690473_691424_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31578.1|691441_692089_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
AZX31579.1|692098_692350_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31580.1|692412_692895_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
AZX31581.1|692896_693097_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31582.1|693096_693492_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
AZX31583.1|693488_693887_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
AZX31584.1|693883_694306_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31585.1|694313_694814_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
AZX31586.1|695068_695587_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
AZX31587.1|695596_695926_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
AZX31588.1|695943_696234_+	hypothetical protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
AZX31589.1|696259_698872_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
AZX31590.1|698881_699241_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31591.1|699308_699842_+	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
AZX31592.1|699838_700228_+	hypothetical protein	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
AZX31593.1|700220_704177_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
AZX31594.1|704181_704598_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31595.1|704816_705080_+	hypothetical protein	NA	A0A1B0V3F2	Roseobacter_phage	41.8	7.2e-09
AZX31596.1|705079_705892_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31597.1|705896_706139_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31598.1|706117_706669_+	lysozyme	NA	NA	NA	NA	NA
AZX31599.1|706650_707184_+	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
AZX31600.1|707180_707462_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31601.1|707804_708005_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31602.1|708011_708683_-	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
AZX31603.1|709038_709725_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX31604.1|709705_710278_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
AZX31605.1|710343_712074_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
AZX31606.1|712126_712555_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AZX31607.1|712557_713238_+	protein TolQ	NA	NA	NA	NA	NA
AZX31608.1|713237_713696_+	protein TolR	NA	NA	NA	NA	NA
AZX31609.1|713732_714707_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
AZX31610.1|714723_716040_+	protein TolB	NA	NA	NA	NA	NA
AZX31611.1|716071_716569_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
AZX31612.1|716655_717345_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AZX31613.1|717344_718394_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AZX31614.1|718390_719185_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
AZX31615.1|719353_719704_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31616.1|719679_720237_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31617.1|721161_721380_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31618.1|721366_722317_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	749242	822404	4110592	transposase	Streptococcus_phage(16.67%)	58	NA	NA
AZX31639.1|749242_750193_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31640.1|750847_751945_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
AZX31641.1|751978_753244_+	saccharopine dehydrogenase	NA	NA	NA	NA	NA
AZX31642.1|753401_754352_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31643.1|754595_755186_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AZX34416.1|755201_757646_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX31644.1|757765_758737_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31645.1|758868_759393_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AZX31646.1|759352_760303_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31647.1|760524_762720_-	DNA methylase	NA	NA	NA	NA	NA
AZX31648.1|762792_763200_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZX31649.1|763322_764273_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31650.1|764388_764832_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX31651.1|764894_765689_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX31652.1|765854_766991_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
AZX31653.1|767061_768195_-	GTPase ObgE	NA	NA	NA	NA	NA
AZX31654.1|768344_768605_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
AZX31655.1|768638_768950_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
AZX31656.1|769374_770523_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
AZX31657.1|770637_771603_+	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
AZX31658.1|771871_772738_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31659.1|772868_774917_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AZX31660.1|774934_776932_+	hydantoin utilization protein B	NA	NA	NA	NA	NA
AZX31661.1|776966_778304_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AZX31662.1|778566_780420_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31663.1|780474_781956_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZX31664.1|781971_782559_-	cyclolysin-activating lysine-acyltransferase CyaC	NA	NA	NA	NA	NA
AZX34417.1|782641_782821_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31665.1|783007_788128_+	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
AZX31666.1|788205_790344_+	cyclolysin secretion/processing ATP-binding protein CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
AZX31667.1|790340_791663_+	protein CyaD	NA	NA	NA	NA	NA
AZX31668.1|791664_793089_+	protein CyaE	NA	NA	NA	NA	NA
AZX31669.1|793179_794088_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31670.1|794152_795067_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX31671.1|795904_796588_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX31672.1|796604_797348_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.5e-32
AZX31673.1|797377_798238_+	aminotransferase	NA	NA	NA	NA	NA
AZX31674.1|798245_798812_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31675.1|798900_799857_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31676.1|799901_800654_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX31677.1|800650_802396_-	acetolactate synthase catalytic subunit	NA	NA	NA	NA	NA
AZX31678.1|802480_803215_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31679.1|803531_804554_+	autotransporter domain-containing protein	NA	NA	NA	NA	NA
AZX31680.1|804569_805292_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31681.1|805436_806444_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
AZX31682.1|806484_808017_-	long-chain fatty acid--CoA ligase	NA	NA	NA	NA	NA
AZX31683.1|808013_809132_-	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
AZX31684.1|809128_809911_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX31685.1|809922_810786_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
AZX34418.1|810804_811902_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31686.1|811970_812897_-	VOC family protein	NA	NA	NA	NA	NA
AZX31687.1|812931_814626_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZX31688.1|814825_815761_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AZX31689.1|815866_816817_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31690.1|816915_817572_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AZX31691.1|817719_820428_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
AZX31692.1|820437_821457_+	fructose 1,6-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
AZX31693.1|821453_822404_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	855151	904415	4110592	holin,transposase	Vibrio_phage(33.33%)	40	NA	NA
AZX31722.1|855151_856102_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34419.1|856074_856674_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31723.1|856675_857110_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX31724.1|857106_857541_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31725.1|857524_858328_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AZX31726.1|858344_859160_-	DNA repair exonuclease	NA	NA	NA	NA	NA
AZX31727.1|859156_859972_-	diacylglycerol kinase	NA	NA	NA	NA	NA
AZX31728.1|860118_860820_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31729.1|860847_862806_-|holin	choline transporter	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
AZX31730.1|862888_863839_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31731.1|864059_864728_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX31732.1|864851_865958_+	MexH family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZX31733.1|865970_869084_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
AZX31734.1|869080_870574_+	RND transporter	NA	NA	NA	NA	NA
AZX31735.1|870588_871260_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX31736.1|871303_871798_-	azurin	NA	NA	NA	NA	NA
AZX31737.1|871938_872586_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX34420.1|872689_874738_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AZX31738.1|874734_876747_+	hydantoin utilization protein B	NA	NA	NA	NA	NA
AZX31739.1|876772_878107_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX31740.1|878215_879208_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31741.1|879274_881359_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
AZX31742.1|881383_882355_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31743.1|882483_883485_-	peptidase M14	NA	NA	NA	NA	NA
AZX31744.1|883518_884760_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZX31745.1|884840_885764_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
AZX31746.1|885841_886666_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZX34421.1|886862_887879_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX31747.1|888075_889059_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31748.1|890657_892046_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX31749.1|892076_893066_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31750.1|893176_894409_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZX31751.1|894690_895491_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31752.1|895513_897745_-|holin	high-affinity choline transporter BetT	holin	NA	NA	NA	NA
AZX31753.1|898532_898979_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AZX31754.1|899000_899747_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
AZX31755.1|899890_900868_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
AZX31756.1|901501_902113_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
AZX31757.1|902106_903324_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
AZX31758.1|903464_904415_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	914027	978967	4110592	transposase	Bacillus_phage(18.18%)	60	NA	NA
AZX31767.1|914027_914978_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31768.1|914974_916825_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
AZX31769.1|917205_917865_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
AZX31770.1|917952_918105_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31771.1|918213_918381_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31772.1|918392_919073_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
AZX31773.1|919354_920071_+	flagellar brake protein	NA	NA	NA	NA	NA
AZX31774.1|920085_921387_-	phospholipase	NA	NA	NA	NA	NA
AZX31775.1|923531_926420_+	metal-dependent phosphohydrolase	NA	NA	NA	NA	NA
AZX31776.1|926643_927996_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX31777.1|928024_928546_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AZX31778.1|928542_929997_+	carboxylase	NA	NA	NA	NA	NA
AZX31779.1|930031_930280_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31780.1|930385_931261_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31781.1|931286_932342_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31782.1|932354_933146_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31783.1|933178_934549_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AZX31784.1|935725_936676_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31785.1|936728_936950_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31786.1|937109_937322_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31787.1|937441_938560_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AZX31788.1|938656_938872_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31789.1|939065_939317_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31790.1|939429_940380_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31791.1|940376_940760_-	ferredoxin	NA	NA	NA	NA	NA
AZX31792.1|940814_942632_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
AZX34423.1|942778_943606_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
AZX31793.1|943651_944632_+	aldo/keto reductase	NA	NA	NA	NA	NA
AZX31794.1|944628_944841_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31795.1|944837_946019_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
AZX31796.1|946182_946917_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
AZX31797.1|946918_949531_-	penicillin-binding protein	NA	NA	NA	NA	NA
AZX31798.1|949666_951580_-	S9 family peptidase	NA	NA	NA	NA	NA
AZX31799.1|952195_952606_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX31800.1|952703_953789_+	DNA polymerase IV	NA	NA	NA	NA	NA
AZX31801.1|953887_954838_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31802.1|954834_955809_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX31803.1|955933_956845_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
AZX34424.1|957121_957514_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
AZX31804.1|957643_958594_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31805.1|958623_958806_-	addiction module toxin, HicA family	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
AZX31806.1|958844_959102_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31807.1|959578_960760_-	MFS transporter	NA	NA	NA	NA	NA
AZX31808.1|960975_961653_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZX31809.1|961649_962423_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
AZX31810.1|962500_963082_-	OmpA family protein	NA	NA	NA	NA	NA
AZX31811.1|963452_966134_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
AZX31812.1|966133_967267_+	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
AZX31813.1|967259_968345_+	prephenate dehydratase	NA	NA	NA	NA	NA
AZX31814.1|968431_969331_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
AZX31815.1|969327_970656_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AZX31816.1|970670_971342_+	cytidylate kinase	NA	NA	NA	NA	NA
AZX31817.1|971514_973245_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
AZX31818.1|973246_973606_+	integration host factor subunit beta	NA	NA	NA	NA	NA
AZX31819.1|973797_974112_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
AZX31820.1|974154_975375_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
AZX31821.1|975371_976313_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
AZX31822.1|976309_977299_+	ADP-L-glycero-D-mannoheptose-6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
AZX31823.1|977333_977918_+	DUF655 domain-containing protein	NA	NA	NA	NA	NA
AZX31824.1|978016_978967_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	1000608	1062566	4110592	transposase	Enterococcus_phage(16.67%)	52	NA	NA
AZX34426.1|1000608_1001625_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX31840.1|1003133_1003706_-	chorismate--pyruvate lyase	NA	NA	NA	NA	NA
AZX31841.1|1003765_1004497_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AZX34427.1|1004548_1005466_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31842.1|1006273_1009453_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZX31843.1|1009449_1010832_+	multidrug transporter	NA	NA	NA	NA	NA
AZX31844.1|1010901_1011153_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AZX31845.1|1011298_1011949_-	SCO family protein	NA	NA	NA	NA	NA
AZX31846.1|1012099_1014214_-	M3 family peptidase	NA	NA	NA	NA	NA
AZX31847.1|1014289_1015141_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
AZX31848.1|1015137_1015764_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX31849.1|1015760_1017515_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
AZX31850.1|1017807_1020513_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AZX31851.1|1020525_1022187_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
AZX31852.1|1022199_1023990_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
AZX31853.1|1024211_1025387_-	flagellin FliC	NA	NA	NA	NA	NA
AZX31854.1|1025429_1026380_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31855.1|1026478_1027429_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31856.1|1027527_1028268_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AZX31857.1|1028462_1030499_+	transketolase	NA	NA	NA	NA	NA
AZX31858.1|1030516_1031527_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AZX31859.1|1031644_1032838_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
AZX31860.1|1032867_1033641_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZX31861.1|1033637_1034828_-	acetate kinase	NA	NA	NA	NA	NA
AZX31862.1|1034853_1035792_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
AZX34428.1|1035788_1038137_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
AZX31863.1|1038291_1038999_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX31864.1|1039036_1040170_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31865.1|1040446_1040995_-	damage-inducible protein DinB	NA	NA	NA	NA	NA
AZX31866.1|1041013_1041499_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX31867.1|1041676_1042615_+	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
AZX31868.1|1042617_1042935_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31869.1|1042980_1043925_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31870.1|1045605_1046256_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
AZX31871.1|1046309_1046645_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31872.1|1046641_1047502_+	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
AZX31873.1|1047518_1047800_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31874.1|1047873_1048137_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
AZX31875.1|1048380_1049331_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31876.1|1049629_1050367_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
AZX31877.1|1050802_1051126_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA	NA
AZX31878.1|1051160_1051721_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
AZX31879.1|1051841_1052717_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
AZX31880.1|1052729_1053677_+	motility protein MotB	NA	NA	NA	NA	NA
AZX31881.1|1053778_1054072_+	response regulator	NA	NA	NA	NA	NA
AZX31882.1|1054098_1056156_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
AZX31883.1|1056170_1056671_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
AZX31884.1|1056744_1058451_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
AZX31885.1|1059314_1060367_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AZX31886.1|1060419_1060809_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
AZX31887.1|1060817_1061450_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
AZX34429.1|1061549_1062566_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 11
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	1068550	1137761	4110592	holin,tRNA,transposase	uncultured_Mediterranean_phage(25.0%)	55	NA	NA
AZX31892.1|1068550_1069978_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AZX34431.1|1070915_1071932_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX31893.1|1072264_1073200_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
AZX31894.1|1073249_1075130_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
AZX31895.1|1075196_1075541_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
AZX31896.1|1075685_1076822_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
AZX31897.1|1076818_1077892_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AZX31898.1|1078049_1079486_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AZX34432.1|1079576_1080218_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AZX34433.1|1080553_1081570_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX31899.1|1083510_1084461_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34434.1|1085765_1087187_-	siroheme synthase	NA	NA	NA	NA	NA
AZX31900.1|1087450_1088167_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31901.1|1088251_1088569_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
AZX31902.1|1088609_1089023_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZX31903.1|1089024_1089384_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31904.1|1089426_1090971_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
AZX31905.1|1091054_1091885_+	transglycosylase	NA	NA	NA	NA	NA
AZX31906.1|1091919_1093074_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AZX31907.1|1093116_1093989_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31908.1|1094105_1096394_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
AZX31909.1|1097600_1098065_+	barstar family protein 2	NA	NA	NA	NA	NA
AZX31910.1|1098091_1099042_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34435.1|1099409_1100186_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
AZX31911.1|1100230_1101088_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AZX31912.1|1101109_1102126_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AZX31913.1|1102260_1103301_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
AZX31914.1|1103495_1105577_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
AZX31915.1|1105812_1107306_+	exopolyphosphatase	NA	NA	NA	NA	NA
AZX31916.1|1107536_1108331_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX31917.1|1108551_1109910_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AZX31918.1|1109906_1110749_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
AZX31919.1|1110767_1112654_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
AZX31920.1|1112891_1113524_-	ribosomal RNA large subunit methyltransferase E	NA	NA	NA	NA	NA
AZX31921.1|1113542_1114145_+	hypothetical protein	NA	NA	NA	NA	NA
AZX31922.1|1114296_1115247_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31923.1|1116049_1116850_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31924.1|1116893_1117880_-	homoserine kinase	NA	NA	NA	NA	NA
AZX31925.1|1118019_1119033_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AZX31926.1|1119029_1119980_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31927.1|1120092_1120551_-	CBS domain-containing protein	NA	NA	NA	NA	NA
AZX31928.1|1120587_1121901_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31929.1|1121918_1122290_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
AZX31930.1|1122286_1123750_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
AZX31931.1|1123842_1124619_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX31932.1|1124600_1127480_-	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AZX31933.1|1127662_1128613_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX31934.1|1128780_1129605_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
AZX31935.1|1129604_1130483_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX31936.1|1131387_1132503_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX31937.1|1132510_1133326_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
AZX31938.1|1133322_1135188_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
AZX31939.1|1135266_1135899_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX31940.1|1135895_1136198_-	hypothetical protein	NA	NA	NA	NA	NA
AZX31941.1|1136240_1137761_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
>prophage 12
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	1319002	1387489	4110592	transposase	Planktothrix_phage(33.33%)	58	NA	NA
AZX32083.1|1319002_1319953_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32084.1|1320721_1321360_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX34445.1|1322249_1322696_+	glutamate racemase	NA	NA	NA	NA	NA
AZX32085.1|1322777_1323479_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
AZX32086.1|1323479_1324247_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
AZX32087.1|1324243_1325482_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
AZX32088.1|1325481_1326408_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
AZX32089.1|1326510_1327626_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32090.1|1327641_1328592_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32091.1|1328945_1329527_-	hypothetical protein	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
AZX32092.1|1329523_1330357_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AZX34446.1|1330567_1331881_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
AZX32093.1|1332057_1332939_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
AZX32094.1|1332958_1333810_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
AZX32095.1|1333862_1334951_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
AZX32096.1|1335061_1336189_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX34447.1|1336423_1337035_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX32097.1|1337133_1338084_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32098.1|1338305_1338683_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AZX34448.1|1338830_1339328_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
AZX32099.1|1339324_1339852_+	RES domain-containing protein	NA	NA	NA	NA	NA
AZX32100.1|1339985_1340801_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32101.1|1340813_1341995_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AZX32102.1|1342042_1342936_-	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA	NA
AZX34449.1|1343062_1343533_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32103.1|1343658_1344486_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
AZX32104.1|1344514_1345291_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
AZX32105.1|1345287_1345581_-	biotin--protein ligase	NA	NA	NA	NA	NA
AZX32106.1|1345577_1346042_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX32107.1|1346053_1346839_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
AZX32108.1|1346864_1347365_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
AZX32109.1|1347447_1348626_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
AZX32110.1|1350253_1350589_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AZX32111.1|1350776_1352225_+	CoA transferase	NA	NA	NA	NA	NA
AZX32112.1|1352282_1352627_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
AZX32113.1|1352733_1353273_-	peroxiredoxin	NA	NA	NA	NA	NA
AZX32114.1|1353365_1354316_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32115.1|1354302_1354785_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32116.1|1355054_1355486_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32117.1|1355667_1356072_-	DoxX family protein	NA	NA	NA	NA	NA
AZX32118.1|1357308_1357632_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32119.1|1357634_1358522_-	aldo/keto reductase	NA	NA	NA	NA	NA
AZX32120.1|1358554_1358980_-	universal stress protein	NA	NA	NA	NA	NA
AZX32121.1|1359051_1359405_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32122.1|1359644_1360151_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32123.1|1360189_1361521_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
AZX32124.1|1361580_1362396_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
AZX32125.1|1362392_1363247_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
AZX34450.1|1366309_1368853_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
AZX32126.1|1370219_1371974_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
AZX32127.1|1371970_1374091_-	glycogen debranching enzyme GlgX	NA	NA	NA	NA	NA
AZX32128.1|1374095_1376291_-	1,4-alpha-glucan-branching protein	NA	NA	NA	NA	NA
AZX34451.1|1376287_1379629_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
AZX32129.1|1382431_1383382_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32130.1|1383447_1383627_-	hypothetical protein	NA	NA	NA	NA	NA
AZX34452.1|1383743_1384466_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX32131.1|1384485_1385631_-	DUF3182 domain-containing protein	NA	NA	NA	NA	NA
AZX32132.1|1386538_1387489_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	1447980	1503468	4110592	transposase,protease	Mollivirus(16.67%)	56	NA	NA
AZX32179.1|1447980_1448931_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32180.1|1450132_1450579_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
AZX32181.1|1450571_1452047_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
AZX32182.1|1452043_1452799_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
AZX32183.1|1452791_1453802_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
AZX32184.1|1453791_1455468_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA	NA
AZX32185.1|1455780_1456113_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
AZX32186.1|1456126_1456522_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32187.1|1456531_1456858_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
AZX32188.1|1456854_1457181_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
AZX32189.1|1457107_1458130_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
AZX32190.1|1458126_1458507_-	flagellar protein FliT	NA	NA	NA	NA	NA
AZX32191.1|1458524_1458953_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
AZX32192.1|1458960_1460334_-	flagellar hook protein FliD	NA	NA	NA	NA	NA
AZX34457.1|1460474_1460852_-	flagellar protein	NA	NA	NA	NA	NA
AZX32193.1|1461114_1462422_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
AZX32194.1|1462482_1463313_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
AZX32195.1|1463309_1463798_+	colicin V synthesis protein	NA	NA	NA	NA	NA
AZX32196.1|1463839_1465360_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
AZX34458.1|1465403_1465880_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
AZX32197.1|1466683_1469281_-	bifunctional uridylyltransferase/uridylyl-removing protein	NA	NA	NA	NA	NA
AZX32198.1|1469310_1470132_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
AZX32199.1|1470858_1471608_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
AZX32200.1|1471740_1472670_+	elongation factor Ts	NA	NA	NA	NA	NA
AZX32201.1|1472767_1473484_+	UMP kinase	NA	NA	NA	NA	NA
AZX32202.1|1473498_1474059_+	ribosome-recycling factor	NA	NA	NA	NA	NA
AZX32203.1|1474096_1474990_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	2.0e-18
AZX32204.1|1475009_1475867_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
AZX32205.1|1475863_1477063_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
AZX32206.1|1477102_1478437_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
AZX32207.1|1478489_1480826_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
AZX34459.1|1480951_1481515_+	outer membrane protein chaperone	NA	NA	NA	NA	NA
AZX32208.1|1481523_1482615_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AZX32209.1|1482686_1483142_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AZX32210.1|1483142_1483937_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AZX32211.1|1483933_1485115_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AZX32212.1|1485101_1485707_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
AZX32213.1|1485703_1486477_+	RNA methyltransferase	NA	NA	NA	NA	NA
AZX32214.1|1486488_1487316_-	phosphoenolpyruvate synthase regulatory protein	NA	NA	NA	NA	NA
AZX32215.1|1487477_1489841_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
AZX32216.1|1489908_1490628_-	GMP synthase	NA	NA	NA	NA	NA
AZX32217.1|1490751_1491177_+	NfeD-like family protein 1	NA	NA	NA	NA	NA
AZX32218.1|1491211_1492162_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32219.1|1492279_1493206_+	paraslipin	NA	NA	NA	NA	NA
AZX32220.1|1493271_1494429_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
AZX32221.1|1494409_1494877_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
AZX32222.1|1495024_1495975_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32223.1|1495991_1496426_+	ubiquinone-binding protein	NA	NA	NA	NA	NA
AZX32224.1|1496415_1496766_+	RnfH family protein	NA	NA	NA	NA	NA
AZX32225.1|1496962_1498117_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX32226.1|1498113_1499286_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX32227.1|1499333_1500227_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX32228.1|1500272_1500710_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX32229.1|1500769_1501459_+	VIT family protein	NA	NA	NA	NA	NA
AZX32230.1|1501468_1502419_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32231.1|1502517_1503468_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	1542791	1600868	4110592	tRNA,protease,transposase	Planktothrix_phage(15.38%)	60	NA	NA
AZX32264.1|1542791_1543604_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AZX32265.1|1543748_1544843_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32266.1|1545054_1545684_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32267.1|1545686_1547354_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZX32268.1|1547368_1548025_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
AZX32269.1|1548504_1549455_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32270.1|1549481_1550255_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AZX32271.1|1550266_1551508_+	MFS transporter	NA	NA	NA	NA	NA
AZX32272.1|1553284_1554235_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32273.1|1554266_1555364_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
AZX32274.1|1555360_1556311_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32275.1|1556732_1557125_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32276.1|1557130_1557907_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX32277.1|1558294_1560244_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
AZX32278.1|1560264_1560810_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
AZX32279.1|1560946_1561903_+	glutathione synthetase	NA	NA	NA	NA	NA
AZX32280.1|1561913_1562312_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
AZX32281.1|1562427_1562697_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
AZX32282.1|1562818_1564513_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
AZX32283.1|1564677_1564902_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32284.1|1565500_1566451_+	ornithine cyclodeaminase	NA	NA	NA	NA	NA
AZX32285.1|1566492_1567653_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32286.1|1567813_1568734_+	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
AZX32287.1|1568746_1569388_+	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
AZX32288.1|1569384_1570056_+	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
AZX32289.1|1570052_1570823_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
AZX32290.1|1570921_1571872_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32291.1|1572088_1572493_-	GFA family protein	NA	NA	NA	NA	NA
AZX32292.1|1572566_1573757_-	formate dehydrogenase	NA	NA	NA	NA	NA
AZX32293.1|1573790_1574117_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
AZX32294.1|1574139_1574655_-	transporter	NA	NA	NA	NA	NA
AZX32295.1|1574713_1575940_-	acetamidase/formamidase family protein	NA	A0A1V0S8X7	Catovirus	58.8	5.2e-134
AZX32296.1|1576117_1577248_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZX32297.1|1577482_1578064_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
AZX32298.1|1578200_1579265_+	fructose-bisphosphate aldolase class II	NA	NA	NA	NA	NA
AZX32299.1|1579349_1579796_-	GFA family protein	NA	NA	NA	NA	NA
AZX32300.1|1580020_1580902_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	36.1	1.8e-51
AZX32301.1|1580956_1581208_+	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA	NA
AZX32302.1|1581210_1581612_+	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA	NA
AZX32303.1|1581631_1581868_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32304.1|1581875_1582355_+	disulfide bond formation protein B	NA	NA	NA	NA	NA
AZX32305.1|1582540_1583020_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.5	6.5e-16
AZX32306.1|1583022_1584213_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AZX32307.1|1584217_1585270_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	37.8	4.8e-35
AZX32308.1|1585406_1586429_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	40.7	1.6e-67
AZX32309.1|1586520_1587357_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32310.1|1587549_1588455_+	agmatinase	NA	NA	NA	NA	NA
AZX32311.1|1588481_1589273_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32312.1|1589295_1589988_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX32313.1|1590009_1590762_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	2.8e-29
AZX32314.1|1590890_1592450_+	acetolactate synthase large subunit	NA	NA	NA	NA	NA
AZX32315.1|1592481_1593027_+	acyl dehydratase	NA	NA	NA	NA	NA
AZX32316.1|1593164_1594421_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX32317.1|1594437_1596132_-	thiamine pyrophosphate-binding protein	NA	E5ERI2	Ostreococcus_lucimarinus_virus	24.5	3.8e-26
AZX32318.1|1596289_1597177_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	28.7	3.4e-18
AZX32319.1|1597214_1598147_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	29.5	2.3e-25
AZX34461.1|1598160_1598649_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
AZX32320.1|1598766_1599345_+|protease	protease	protease	NA	NA	NA	NA
AZX32321.1|1599417_1599819_+	aryl-sulfate sulfotransferase	NA	NA	NA	NA	NA
AZX32322.1|1599917_1600868_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	1614180	1667297	4110592	transposase	Rhodococcus_phage(11.11%)	51	NA	NA
AZX32330.1|1614180_1615131_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32331.1|1615229_1616180_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32332.1|1616249_1617014_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
AZX32333.1|1617010_1617610_-	hypothetical protein	NA	NA	NA	NA	NA
AZX34462.1|1617713_1618559_-	hypothetical protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
AZX32334.1|1618624_1619251_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
AZX32335.1|1619247_1620198_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32336.1|1620184_1620373_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32337.1|1620296_1621418_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
AZX32338.1|1621398_1622400_-	aminopeptidase	NA	NA	NA	NA	NA
AZX32339.1|1622505_1624017_-	thiol oxidoreductase	NA	NA	NA	NA	NA
AZX32340.1|1624013_1625318_-	peptidase	NA	NA	NA	NA	NA
AZX32341.1|1625429_1625990_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZX32342.1|1626257_1626812_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
AZX32343.1|1627267_1627483_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
AZX34463.1|1627737_1630335_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
AZX32344.1|1630331_1631519_+	cupin	NA	NA	NA	NA	NA
AZX32345.1|1632179_1632794_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
AZX32346.1|1632882_1634010_-	lipoprotein	NA	NA	NA	NA	NA
AZX32347.1|1634021_1634927_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
AZX32348.1|1635819_1636770_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32349.1|1636951_1637704_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
AZX32350.1|1637772_1638432_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
AZX32351.1|1638428_1639157_+	glutamine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
AZX32352.1|1639169_1641449_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
AZX32353.1|1641473_1641677_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
AZX32354.1|1641718_1642366_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	3.1e-13
AZX32355.1|1642486_1643404_-	cytochrome C	NA	NA	NA	NA	NA
AZX32356.1|1643400_1644114_-	cytochrome C	NA	NA	NA	NA	NA
AZX32357.1|1644351_1645122_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX32358.1|1645126_1645726_-	NlpC/P60 family protein	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
AZX32359.1|1645970_1647461_+	AMP nucleosidase	NA	NA	NA	NA	NA
AZX32360.1|1647519_1647804_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX32361.1|1647800_1647929_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32362.1|1647941_1648097_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32363.1|1648369_1649296_-	YicC family protein	NA	NA	NA	NA	NA
AZX32364.1|1649432_1650173_+	ribonuclease PH	NA	NA	NA	NA	NA
AZX32365.1|1650339_1651716_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX32366.1|1651897_1652803_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX32367.1|1652837_1654577_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	27.1	1.0e-10
AZX32368.1|1654454_1656257_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZX32369.1|1656374_1657025_+	non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family	NA	NA	NA	NA	NA
AZX32370.1|1657123_1658074_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32371.1|1658095_1659316_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
AZX32372.1|1659501_1660914_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AZX32373.1|1660977_1662045_+	PAS domain-containing sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
AZX32374.1|1662041_1663532_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
AZX34464.1|1663541_1664486_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32375.1|1664645_1665344_+	pirin family protein	NA	NA	NA	NA	NA
AZX32376.1|1665421_1666327_+	pirin family protein	NA	NA	NA	NA	NA
AZX32377.1|1666346_1667297_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	1703246	1758837	4110592	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
AZX32401.1|1703246_1704197_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32402.1|1704255_1705029_+	oxidoreductase	NA	NA	NA	NA	NA
AZX32403.1|1705021_1706578_+	LTA synthase family protein	NA	NA	NA	NA	NA
AZX32404.1|1706574_1707525_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32405.1|1708851_1709454_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32406.1|1709693_1710395_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX32407.1|1710388_1711171_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
AZX32408.1|1711355_1712306_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32409.1|1712404_1713142_-	hypothetical protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
AZX32410.1|1713331_1714090_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX32411.1|1714136_1715126_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX32412.1|1715303_1716272_-	transporter	NA	NA	NA	NA	NA
AZX32413.1|1717811_1718780_+	AAA family ATPase	NA	NA	NA	NA	NA
AZX32414.1|1718788_1719730_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AZX32415.1|1720203_1721214_+	hypothetical protein	NA	NA	NA	NA	NA
AZX34467.1|1721204_1722719_+	VWA domain-containing protein	NA	NA	NA	NA	NA
AZX32416.1|1722715_1724062_+	hypothetical protein	NA	NA	NA	NA	NA
AZX34468.1|1724064_1725099_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
AZX32417.1|1725148_1726774_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
AZX32418.1|1727326_1728277_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32419.1|1728381_1729329_+	hypothetical protein	NA	NA	NA	NA	NA
AZX34469.1|1729382_1731197_-	histidine kinase	NA	NA	NA	NA	NA
AZX32420.1|1731189_1731864_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX32421.1|1731993_1735068_+	autotransporter SphB2	NA	NA	NA	NA	NA
AZX32422.1|1735081_1735381_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX34470.1|1735695_1736319_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX32423.1|1736562_1737432_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
AZX32424.1|1737409_1738354_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX34471.1|1738439_1739411_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX34472.1|1739478_1740252_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX32425.1|1740248_1741445_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AZX32426.1|1741475_1742426_-	hydrolase	NA	NA	NA	NA	NA
AZX32427.1|1742647_1743337_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX32428.1|1743401_1744157_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX32429.1|1744208_1745201_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX32430.1|1745210_1746164_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32431.1|1746279_1747242_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX32432.1|1748643_1749072_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32433.1|1749068_1750019_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34473.1|1750312_1751035_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
AZX32434.1|1751473_1752661_-	MFS transporter	NA	NA	NA	NA	NA
AZX32435.1|1752664_1753045_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32436.1|1754764_1755736_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX32437.1|1755749_1756463_+	NAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX32438.1|1756467_1757385_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32439.1|1757491_1757788_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32440.1|1757886_1758837_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	1991601	2061253	4110592	tRNA,transposase	Staphylococcus_phage(16.67%)	56	NA	NA
AZX32613.1|1991601_1994259_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
AZX32614.1|1994336_1995539_-	MFS transporter	NA	NA	NA	NA	NA
AZX32615.1|1995535_1996048_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX34484.1|1996170_1996509_-	DNA-binding protein	NA	NA	NA	NA	NA
AZX32616.1|1996884_1997835_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32617.1|1997933_1998884_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32618.1|1999047_2000943_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
AZX32619.1|2001056_2001224_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
AZX32620.1|2001287_2001524_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
AZX32621.1|2001892_2003092_-	Bcr/CflA family drug resistance efflux transporter	NA	NA	NA	NA	NA
AZX32622.1|2004607_2005558_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32623.1|2006009_2007011_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32624.1|2007183_2008041_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX32625.1|2008037_2009300_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
AZX32626.1|2009400_2009775_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
AZX32627.1|2009823_2011035_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZX32628.1|2011119_2011890_+	spermidine synthase	NA	NA	NA	NA	NA
AZX32629.1|2012003_2012768_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX34485.1|2012883_2014020_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
AZX32630.1|2014016_2014823_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX32631.1|2016567_2017539_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX32632.1|2017695_2018208_+	superoxide dismutase [Cu-Zn] SodC1	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
AZX32633.1|2018366_2019341_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32634.1|2020341_2021136_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
AZX34486.1|2021161_2021968_-	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA	NA
AZX32635.1|2022078_2022669_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AZX32636.1|2022679_2023858_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32637.1|2023960_2024335_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX32638.1|2024587_2025919_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZX32639.1|2025985_2029216_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZX32640.1|2030706_2031453_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AZX32641.1|2031537_2031999_+	holo-ACP synthase	NA	NA	NA	NA	NA
AZX32642.1|2032036_2033095_+	beta-hexosaminidase	NA	NA	NA	NA	NA
AZX32643.1|2033057_2034887_+	UvrABC system protein C	NA	NA	NA	NA	NA
AZX32644.1|2034926_2035499_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
AZX32645.1|2036923_2037835_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	5.9e-42
AZX32646.1|2038063_2039386_+	isocitrate lyase	NA	NA	NA	NA	NA
AZX32647.1|2039745_2040381_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32648.1|2040340_2041291_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32649.1|2042161_2043034_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX32650.1|2043111_2044251_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32651.1|2044600_2045866_+	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA	NA
AZX32652.1|2045871_2046399_+	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
AZX32653.1|2046403_2047222_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX32654.1|2047221_2047944_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX32655.1|2047965_2048280_+	ferredoxin	NA	NA	NA	NA	NA
AZX32656.1|2048276_2049446_+	CoA transferase	NA	NA	NA	NA	NA
AZX32657.1|2049476_2050352_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX32658.1|2050348_2051668_-	phenylacetate--CoA ligase family protein	NA	NA	NA	NA	NA
AZX32659.1|2051740_2052937_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
AZX32660.1|2052947_2054435_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32661.1|2057029_2057929_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32662.1|2058066_2059032_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX32663.1|2059130_2060081_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32664.1|2060124_2060316_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32665.1|2060302_2061253_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	2072749	2122145	4110592	transposase	Erysipelothrix_phage(16.67%)	44	NA	NA
AZX32677.1|2072749_2073700_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32678.1|2074837_2075134_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32679.1|2075308_2076661_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
AZX34488.1|2076803_2077820_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX34489.1|2079799_2080813_-	flavin-nucleotide-binding protein	NA	NA	NA	NA	NA
AZX32680.1|2080899_2081805_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32681.1|2081961_2082306_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32682.1|2082463_2082922_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
AZX32683.1|2082935_2085152_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
AZX32684.1|2085148_2086210_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32685.1|2086238_2087213_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX32686.1|2087164_2087983_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
AZX32687.1|2087995_2088604_-	peptidase S16	NA	NA	NA	NA	NA
AZX32688.1|2088778_2089174_+	VOC family protein	NA	NA	NA	NA	NA
AZX32689.1|2089192_2090632_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
AZX32690.1|2090660_2091008_+	GFA family protein	NA	NA	NA	NA	NA
AZX32691.1|2091026_2091977_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32692.1|2092629_2093580_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32693.1|2093663_2095481_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
AZX32694.1|2095554_2096202_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32695.1|2096214_2097144_-	ZIP family metal transporter	NA	NA	NA	NA	NA
AZX32696.1|2097313_2097778_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32697.1|2098025_2098706_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32698.1|2098754_2100446_+	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
AZX32699.1|2100461_2101013_-	ATPase	NA	NA	NA	NA	NA
AZX32700.1|2101009_2101381_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX32701.1|2101493_2102330_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX32702.1|2102340_2102865_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
AZX32703.1|2102962_2103142_+	DUF3008 domain-containing protein	NA	NA	NA	NA	NA
AZX32704.1|2103271_2104303_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX32705.1|2104376_2104733_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
AZX34490.1|2104722_2105598_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AZX32706.1|2105696_2106581_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32707.1|2106602_2107898_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
AZX32708.1|2108846_2109497_+	flavodoxin family protein	NA	NA	NA	NA	NA
AZX34491.1|2109584_2111105_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AZX32709.1|2111362_2113228_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZX32710.1|2114273_2115224_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32711.1|2116196_2116556_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
AZX32712.1|2116543_2117980_-	dethiobiotin synthase	NA	NA	NA	NA	NA
AZX32713.1|2117976_2118630_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX32714.1|2118626_2119826_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
AZX32715.1|2119923_2121198_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
AZX32716.1|2121194_2122145_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	2133349	2174040	4110592	transposase,protease,tRNA	Klosneuvirus(25.0%)	36	NA	NA
AZX32730.1|2133349_2134300_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32731.1|2134398_2135349_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32732.1|2135308_2135722_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
AZX32733.1|2136006_2136306_+	hypothetical protein	NA	NA	NA	NA	NA
AZX34493.1|2136715_2138884_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.1e-36
AZX32734.1|2139683_2141714_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
AZX32735.1|2141733_2141946_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AZX32736.1|2142223_2142763_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
AZX32737.1|2142876_2144184_-	adenylosuccinate synthetase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
AZX32738.1|2144248_2145406_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
AZX32739.1|2145589_2146489_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
AZX32740.1|2146507_2147812_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AZX32741.1|2147777_2148884_-	GTPase HflX	NA	NA	NA	NA	NA
AZX32742.1|2148971_2149208_-	RNA-binding protein Hfq	NA	NA	NA	NA	NA
AZX32743.1|2149346_2150417_-	histidinol-phosphate aminotransferase 1	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
AZX32744.1|2150420_2151776_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
AZX32745.1|2151802_2152963_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
AZX32746.1|2152965_2153604_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32747.1|2153605_2154910_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
AZX32748.1|2154950_2156246_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA	NA
AZX32749.1|2156252_2156759_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX32750.1|2156755_2157904_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
AZX32751.1|2157931_2158357_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
AZX32752.1|2158679_2161562_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
AZX32753.1|2161654_2162410_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
AZX32754.1|2163175_2164525_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AZX32755.1|2164623_2165574_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32756.1|2165672_2166623_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32757.1|2166696_2167170_+	RidA family protein	NA	NA	NA	NA	NA
AZX32758.1|2167195_2168404_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
AZX32759.1|2168400_2169174_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AZX32760.1|2169173_2169797_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AZX32761.1|2169962_2170223_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
AZX32762.1|2170526_2171108_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32763.1|2171174_2171429_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
AZX32764.1|2171415_2174040_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
>prophage 20
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	2201823	2263028	4110592	transposase,protease,tRNA	Lake_Baikal_phage(21.43%)	53	NA	NA
AZX32784.1|2201823_2202774_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32785.1|2202974_2203784_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX32786.1|2203908_2204859_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32787.1|2204855_2205749_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AZX32788.1|2205873_2206068_-	Fe-S assembly protein IscX	NA	NA	NA	NA	NA
AZX32789.1|2206067_2206409_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
AZX32790.1|2206418_2208281_-	chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
AZX32791.1|2208410_2208923_-	co-chaperone protein HscB	NA	NA	NA	NA	NA
AZX32792.1|2208925_2209249_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
AZX32793.1|2209250_2209661_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
AZX32794.1|2209698_2210910_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
AZX32795.1|2210927_2211440_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
AZX32796.1|2211655_2212147_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
AZX32797.1|2212399_2214436_-	UvrABC system protein B	NA	NA	NA	NA	NA
AZX32798.1|2214513_2215716_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AZX32799.1|2215766_2216495_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	2.8e-10
AZX32800.1|2218052_2219003_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32801.1|2219573_2219786_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32802.1|2219803_2220535_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32803.1|2220569_2221211_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AZX32804.1|2221203_2221920_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZX32805.1|2224084_2224861_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZX32806.1|2224882_2226040_-	thiolase	NA	NA	NA	NA	NA
AZX32807.1|2226036_2226468_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32808.1|2226464_2227268_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX32809.1|2227281_2227737_-	MaoC family dehydratase	NA	NA	NA	NA	NA
AZX32810.1|2227749_2228721_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX32811.1|2228786_2230010_-	CoA transferase	NA	NA	NA	NA	NA
AZX32812.1|2230237_2231188_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32813.1|2231311_2233765_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
AZX32814.1|2233953_2235258_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
AZX32815.1|2235362_2236016_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
AZX32816.1|2236018_2237329_-	trigger factor	NA	NA	NA	NA	NA
AZX32817.1|2237507_2238086_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
AZX32818.1|2238197_2238398_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
AZX32819.1|2238743_2239310_-	DUF924 domain-containing protein	NA	NA	NA	NA	NA
AZX32820.1|2239393_2239597_-	cold-shock protein CspA	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
AZX32821.1|2239903_2240224_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32822.1|2240265_2240547_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32823.1|2240621_2241878_-	autotransporter Phg	NA	NA	NA	NA	NA
AZX32824.1|2242260_2242590_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX32825.1|2244160_2244982_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AZX32826.1|2244981_2246121_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AZX32827.1|2246127_2247024_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AZX32828.1|2247020_2248946_+	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
AZX32829.1|2249305_2251918_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZX32830.1|2251970_2254271_-	DNA helicase II	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
AZX32831.1|2254267_2255476_-	acyl-CoA desaturase	NA	NA	NA	NA	NA
AZX32832.1|2255737_2256112_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32833.1|2256108_2257059_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32834.1|2257157_2259152_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
AZX32835.1|2259211_2260177_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
AZX32836.1|2260166_2263028_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
>prophage 21
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	2266421	2314436	4110592	transposase,tRNA	uncultured_Mediterranean_phage(16.67%)	44	NA	NA
AZX32841.1|2266421_2267372_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32842.1|2267358_2267538_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32843.1|2267482_2267923_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
AZX32844.1|2268051_2269281_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
AZX32845.1|2269319_2270141_-	DUF455 domain-containing protein	NA	NA	NA	NA	NA
AZX32846.1|2270194_2271346_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX32847.1|2271437_2271926_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
AZX32848.1|2274452_2277026_+	cyanophycin synthetase	NA	NA	NA	NA	NA
AZX32849.1|2277096_2279670_+	cyanophycin synthetase	NA	NA	NA	NA	NA
AZX32850.1|2279935_2280136_+	CsbD family protein	NA	NA	NA	NA	NA
AZX32851.1|2280167_2280329_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
AZX32852.1|2280386_2280725_+	phospholipid-binding protein	NA	NA	NA	NA	NA
AZX32853.1|2280873_2281824_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32854.1|2281922_2282873_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32855.1|2282971_2283691_-	ABC transporter	NA	G9BWD6	Planktothrix_phage	36.6	1.4e-22
AZX34495.1|2283767_2284316_+	arylesterase	NA	NA	NA	NA	NA
AZX32856.1|2284297_2286313_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AZX32857.1|2286495_2287245_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
AZX32858.1|2287257_2288121_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
AZX32859.1|2288124_2289540_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
AZX32860.1|2289673_2290402_-	glutaredoxin	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
AZX32861.1|2290540_2290741_-	copper chaperone	NA	NA	NA	NA	NA
AZX32862.1|2290916_2291315_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AZX32863.1|2291338_2292739_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
AZX34496.1|2292857_2293610_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32864.1|2293898_2294576_-	hypothetical protein	NA	NA	NA	NA	NA
AZX32865.1|2294602_2295382_-	3'-5' exonuclease	NA	NA	NA	NA	NA
AZX32866.1|2295378_2296263_-	peptidase	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
AZX34497.1|2296280_2296970_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.2e-32
AZX32867.1|2297044_2297803_-	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
AZX32868.1|2297928_2298576_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZX34498.1|2298843_2299860_+|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX32869.1|2299957_2300998_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
AZX32870.1|2301132_2302425_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
AZX32871.1|2303784_2304168_+	thioredoxin	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
AZX32872.1|2304185_2304773_-	DUF1949 domain-containing protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
AZX32873.1|2304810_2305761_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32874.1|2305859_2306420_-	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
AZX32875.1|2306416_2306962_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32876.1|2307157_2308186_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32877.1|2308226_2309567_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
AZX32878.1|2309675_2310680_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32879.1|2310786_2313387_+	DUF3394 domain-containing protein	NA	NA	NA	NA	NA
AZX32880.1|2313485_2314436_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	2353549	2417127	4110592	transposase,protease	uncultured_Caudovirales_phage(11.11%)	49	NA	NA
AZX32919.1|2353549_2354500_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32920.1|2354801_2355278_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
AZX32921.1|2355901_2357539_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.2	8.8e-12
AZX32922.1|2357569_2358883_-	pyrimidine utilization transport protein G	NA	Q9KX94	Enterobacteria_phage	67.1	2.1e-149
AZX32923.1|2359016_2359334_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32924.1|2359434_2360757_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32925.1|2360753_2361704_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32926.1|2361802_2362753_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32927.1|2363282_2364305_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32928.1|2364333_2365164_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
AZX34503.1|2365180_2366878_-	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
AZX32929.1|2366942_2368019_-	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
AZX32930.1|2368178_2369042_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX32931.1|2369072_2369642_+	phosphohydrolase	NA	NA	NA	NA	NA
AZX32932.1|2369658_2370510_-	sulfurtransferase	NA	NA	NA	NA	NA
AZX32933.1|2371567_2372449_+|protease	protease HtpX	protease	NA	NA	NA	NA
AZX32934.1|2372523_2373513_-	quinone oxidoreductase	NA	NA	NA	NA	NA
AZX32935.1|2373575_2374526_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX32936.1|2374588_2375446_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX32937.1|2375505_2375994_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX32938.1|2377542_2378757_+	EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZX32939.1|2378753_2380340_+	multidrug resistance protein	NA	NA	NA	NA	NA
AZX32940.1|2380358_2381426_-	tartrate dehydrogenase	NA	NA	NA	NA	NA
AZX32941.1|2381530_2383075_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
AZX32942.1|2383494_2385069_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX32943.1|2385176_2386193_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX32944.1|2386189_2387029_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX32945.1|2387033_2388671_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
AZX32946.1|2388667_2389618_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX32947.1|2389760_2391035_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
AZX32948.1|2391031_2391355_+	cupin domain-containing protein	NA	NA	NA	NA	NA
AZX34504.1|2391427_2392441_+	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
AZX32949.1|2392460_2393723_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
AZX32950.1|2393725_2394649_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX32951.1|2394645_2396139_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AZX32952.1|2396149_2397082_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
AZX32953.1|2397263_2398589_+	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
AZX32954.1|2398623_2399979_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
AZX32955.1|2400039_2401638_-	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.8e-78
AZX32956.1|2401714_2402446_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AZX32957.1|2402480_2403854_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
AZX32958.1|2403869_2404781_+	coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
AZX32959.1|2404771_2405365_+	nicotinate-nicotinamide nucleotide adenylyltransferase	NA	NA	NA	NA	NA
AZX32960.1|2405426_2405813_+	ribosome silencing factor	NA	NA	NA	NA	NA
AZX32961.1|2405824_2406295_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
AZX32962.1|2406306_2406930_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AZX32963.1|2406950_2409698_-	autotransporter Vag8	NA	NA	NA	NA	NA
AZX32964.1|2415974_2416190_+	hypothetical protein	NA	NA	NA	NA	NA
AZX32965.1|2416176_2417127_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	2545220	2609436	4110592	protease,tRNA,transposase	Salmonella_phage(16.67%)	60	NA	NA
AZX33071.1|2545220_2546708_-|protease	serine protease	protease	W5SAB9	Pithovirus	31.5	1.2e-07
AZX33072.1|2546745_2547807_-	siderophore-interacting protein	NA	NA	NA	NA	NA
AZX33073.1|2547803_2548304_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33074.1|2548316_2548916_-	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	26.1	2.2e-05
AZX33075.1|2548912_2549413_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33076.1|2549414_2550644_-	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA	NA
AZX33077.1|2550833_2551073_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	46.6	5.4e-11
AZX33078.1|2551255_2552008_-	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.3	6.9e-12
AZX33079.1|2552009_2552945_-	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA	NA
AZX33080.1|2553026_2554013_-	3-oxoacyl-ACP synthase III	NA	NA	NA	NA	NA
AZX33081.1|2554012_2555071_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
AZX33082.1|2555127_2555310_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
AZX34508.1|2555361_2555955_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
AZX33083.1|2556063_2556663_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AZX33084.1|2556659_2557370_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX33085.1|2557371_2558199_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
AZX33086.1|2560015_2561257_-	MFS transporter	NA	NA	NA	NA	NA
AZX33087.1|2561268_2562042_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AZX33088.1|2562068_2563019_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33089.1|2563117_2563900_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX33090.1|2563988_2565215_-	transporter	NA	NA	NA	NA	NA
AZX33091.1|2565940_2567326_+	alcaligin biosynthesis enzyme	NA	NA	NA	NA	NA
AZX33092.1|2567344_2567950_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX33093.1|2567946_2569803_+	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
AZX33094.1|2569799_2570600_+	siderophore ferric iron reductase	NA	NA	NA	NA	NA
AZX33095.1|2570614_2571808_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
AZX33096.1|2571875_2572850_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX33097.1|2572972_2574196_+	MFS transporter	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
AZX33098.1|2574306_2576511_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX33099.1|2576805_2577465_+	antibiotic resistance protein	NA	NA	NA	NA	NA
AZX33100.1|2577472_2577679_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33101.1|2578017_2578773_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZX33102.1|2578788_2578950_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33103.1|2579043_2579559_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
AZX33104.1|2579831_2580149_+	virulence factor	NA	NA	NA	NA	NA
AZX33105.1|2580336_2580585_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33106.1|2580863_2582219_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
AZX33107.1|2582265_2583645_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
AZX33108.1|2583707_2584340_-	outer-membrane lipoprotein carrier protein LolA	NA	NA	NA	NA	NA
AZX34509.1|2584339_2586700_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
AZX33109.1|2586741_2587701_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
AZX33110.1|2587687_2588374_+	DNA mismatch repair protein MutS	NA	NA	NA	NA	NA
AZX33111.1|2588370_2588703_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AZX33112.1|2588818_2589769_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33113.1|2589867_2590818_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33114.1|2590814_2592881_-	cation acetate symporter	NA	NA	NA	NA	NA
AZX33115.1|2592880_2593153_-	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
AZX33116.1|2593847_2593937_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
AZX33117.1|2593936_2595721_+	potassium-transporting ATPase A chain	NA	NA	NA	NA	NA
AZX33118.1|2595744_2597910_+	K(+)-transporting ATPase subunit B	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
AZX33119.1|2597920_2598520_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
AZX33120.1|2601341_2602037_+	two-component system response regulator KdpE	NA	NA	NA	NA	NA
AZX33121.1|2602045_2602996_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33122.1|2603094_2604336_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33123.1|2604485_2605466_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33124.1|2605664_2606921_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
AZX33125.1|2607123_2607549_+	DUF1841 domain-containing protein	NA	NA	NA	NA	NA
AZX33126.1|2607590_2607953_-	cytochrome	NA	NA	NA	NA	NA
AZX33127.1|2607965_2608319_-	cytochrome C	NA	NA	NA	NA	NA
AZX33128.1|2608485_2609436_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	2689113	2729782	4110592	transposase,tRNA	Salmonella_phage(33.33%)	43	NA	NA
AZX33196.1|2689113_2690064_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33197.1|2690174_2690357_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33198.1|2690456_2691053_-	lipoprotein	NA	NA	NA	NA	NA
AZX33199.1|2691236_2692328_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33200.1|2692827_2693238_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33201.1|2693296_2693638_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
AZX33202.1|2693643_2696061_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZX33203.1|2696073_2697096_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
AZX33204.1|2697170_2697530_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AZX33205.1|2697545_2697743_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AZX33206.1|2698078_2699029_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33207.1|2699015_2699204_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33208.1|2699223_2699673_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
AZX33209.1|2699669_2700620_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33210.1|2700730_2702179_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX33211.1|2702293_2702575_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33212.1|2702678_2703629_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33213.1|2703873_2704587_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX33214.1|2704709_2704937_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX33215.1|2705231_2705870_-	DedA family protein	NA	NA	NA	NA	NA
AZX33216.1|2705942_2707013_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AZX33217.1|2707009_2707960_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33218.1|2708375_2708900_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
AZX33219.1|2708903_2709173_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33220.1|2709371_2710433_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZX33221.1|2710516_2712151_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
AZX33222.1|2712152_2712956_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX33223.1|2712984_2713944_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX33224.1|2713947_2715462_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX33225.1|2715498_2716503_-	peptidase M20	NA	NA	NA	NA	NA
AZX33226.1|2716934_2717405_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
AZX33227.1|2717440_2718052_-	LysE family translocator	NA	NA	NA	NA	NA
AZX33228.1|2718082_2718706_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
AZX33229.1|2718786_2720319_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX33230.1|2720353_2721595_-	MFS transporter	NA	NA	NA	NA	NA
AZX33231.1|2721638_2722670_-	alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
AZX33232.1|2722666_2723836_-	amine oxidase	NA	NA	NA	NA	NA
AZX33233.1|2723829_2724510_-	anti-sigma factor	NA	NA	NA	NA	NA
AZX33234.1|2724671_2725514_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33235.1|2725676_2726648_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX33236.1|2726819_2727698_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZX33237.1|2727720_2728791_-	FUSC family protein	NA	NA	NA	NA	NA
AZX33238.1|2728831_2729782_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	2785247	2858117	4110592	tRNA,transposase	Moraxella_phage(16.67%)	59	NA	NA
AZX33282.1|2785247_2785664_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AZX33283.1|2785774_2786407_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
AZX33284.1|2786435_2786879_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
AZX33285.1|2786900_2787992_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX33286.1|2788046_2788847_-	aldolase	NA	NA	NA	NA	NA
AZX33287.1|2788982_2789603_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZX33288.1|2789742_2790216_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33289.1|2791355_2792306_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33290.1|2792302_2799964_-	adhesin	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
AZX33291.1|2800204_2804251_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
AZX33292.1|2804563_2805145_+	TRAP transporter small permease	NA	NA	NA	NA	NA
AZX33293.1|2805141_2806440_+	TRAP transporter large permease	NA	NA	NA	NA	NA
AZX33294.1|2806519_2807548_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZX33295.1|2807471_2807822_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33296.1|2807808_2808759_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33297.1|2808755_2809706_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33298.1|2810022_2810628_+	fimbrial protein FimX	NA	NA	NA	NA	NA
AZX33299.1|2810681_2811995_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
AZX33300.1|2812069_2812540_-	phenylacetic acid degradation protein PaaD	NA	NA	NA	NA	NA
AZX33301.1|2812539_2813328_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
AZX33302.1|2813338_2814991_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
AZX33303.1|2815078_2816029_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34519.1|2817190_2817697_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
AZX33304.1|2817693_2818458_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA	NA
AZX33305.1|2818473_2818758_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
AZX33306.1|2818822_2819812_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
AZX33307.1|2819983_2820913_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
AZX33308.1|2820884_2821571_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
AZX33309.1|2821604_2822150_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
AZX33310.1|2822194_2823460_+	peptidase M48	NA	NA	NA	NA	NA
AZX33311.1|2823456_2824359_+	ribosome biogenesis GTPase	NA	NA	NA	NA	NA
AZX33312.1|2825540_2826485_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX33313.1|2826579_2828097_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX33314.1|2828138_2829767_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZX33315.1|2829874_2830756_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33316.1|2833868_2834243_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
AZX33317.1|2834267_2834606_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AZX33318.1|2834649_2836284_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
AZX33319.1|2836322_2837669_-	mechanosensitive ion channel protein MscS	NA	NA	NA	NA	NA
AZX34520.1|2837776_2839198_+	argininosuccinate lyase	NA	NA	NA	NA	NA
AZX33320.1|2839267_2839852_-	nitroreductase	NA	NA	NA	NA	NA
AZX33321.1|2839954_2840905_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33322.1|2841039_2842146_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33323.1|2842156_2843254_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
AZX33324.1|2843398_2844604_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZX33325.1|2844610_2845132_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
AZX33326.1|2845128_2845620_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
AZX33327.1|2845616_2845868_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
AZX33328.1|2845848_2846334_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
AZX33329.1|2846469_2849931_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33330.1|2849927_2850833_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
AZX33331.1|2850842_2851274_-	lipoprotein	NA	NA	NA	NA	NA
AZX34521.1|2851520_2852024_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
AZX33332.1|2852035_2853502_+	MFS transporter	NA	NA	NA	NA	NA
AZX33333.1|2853576_2854452_-	hypothetical protein	NA	NA	NA	NA	NA
AZX34522.1|2854448_2855456_-	biotin synthase	NA	NA	NA	NA	NA
AZX33334.1|2855923_2856229_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX33335.1|2856319_2856910_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX34523.1|2857100_2858117_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 26
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	2861260	2928071	4110592	transposase,protease	uncultured_Mediterranean_phage(28.57%)	49	NA	NA
AZX33338.1|2861260_2862211_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33339.1|2862309_2863260_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33340.1|2863256_2864051_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
AZX33341.1|2864082_2864787_-	oxidoreductase	NA	NA	NA	NA	NA
AZX33342.1|2864861_2865662_-	SURF1 family protein	NA	NA	NA	NA	NA
AZX33343.1|2865658_2866066_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
AZX33344.1|2866062_2866704_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AZX33345.1|2866696_2868718_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX33346.1|2869957_2871289_+	MFS transporter	NA	NA	NA	NA	NA
AZX33347.1|2871285_2872236_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33348.1|2873942_2874248_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33349.1|2874916_2875255_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX33350.1|2879808_2880411_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33351.1|2880507_2881797_+	MFS transporter	NA	NA	NA	NA	NA
AZX33352.1|2881854_2882586_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
AZX33353.1|2882582_2883386_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
AZX33354.1|2883382_2884471_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX33355.1|2884467_2885397_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX33356.1|2885545_2886691_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX33357.1|2886712_2887663_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33358.1|2887993_2891815_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZX33359.1|2891971_2892640_-	lipoprotein	NA	NA	NA	NA	NA
AZX33360.1|2892644_2894318_-	MCE family protein	NA	NA	NA	NA	NA
AZX33361.1|2894336_2895656_-	paraquat-inducible membrane protein A	NA	NA	NA	NA	NA
AZX33362.1|2895660_2898012_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
AZX34524.1|2898031_2900200_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
AZX33363.1|2900196_2905386_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
AZX33364.1|2905475_2905790_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
AZX33365.1|2906017_2906263_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
AZX33366.1|2906357_2906876_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
AZX33367.1|2906975_2908181_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
AZX33368.1|2908296_2909694_-	chloride channel protein EriC	NA	NA	NA	NA	NA
AZX33369.1|2909810_2910389_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
AZX33370.1|2910461_2911853_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
AZX33371.1|2912020_2912971_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33372.1|2913251_2913872_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AZX33373.1|2913868_2914282_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AZX33374.1|2914278_2915322_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AZX33375.1|2915377_2915566_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33376.1|2915575_2916340_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AZX33377.1|2916430_2917087_+	adenylate kinase	NA	NA	NA	NA	NA
AZX33378.1|2917178_2917937_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX33379.1|2917962_2919564_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
AZX33380.1|2919764_2920769_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
AZX33381.1|2920869_2921133_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
AZX33382.1|2921250_2922027_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
AZX33383.1|2922617_2923568_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33384.1|2925951_2927064_-	malate dehydrogenase	NA	NA	NA	NA	NA
AZX33385.1|2927120_2928071_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	2958457	2997646	4110592	transposase	Planktothrix_phage(50.0%)	38	NA	NA
AZX33414.1|2958457_2959408_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33415.1|2959394_2959640_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33416.1|2959528_2960425_-	inositol monophosphatase	NA	NA	NA	NA	NA
AZX33417.1|2962702_2964928_+	glycosyl hydrolase	NA	NA	NA	NA	NA
AZX33418.1|2965092_2966181_+	methionine import ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
AZX33419.1|2966137_2966791_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX33420.1|2966838_2967636_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX33421.1|2968167_2969118_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33422.1|2969198_2970347_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZX33423.1|2970403_2971354_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33424.1|2971340_2971559_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33425.1|2971452_2971758_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZX33426.1|2971786_2972221_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZX33427.1|2972222_2973467_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZX33428.1|2973463_2974174_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX34526.1|2974188_2975100_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX33429.1|2975462_2975867_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33430.1|2975863_2976322_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33431.1|2976328_2977237_+	hypothetical protein	NA	NA	NA	NA	NA
AZX34527.1|2977233_2978100_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZX33432.1|2978086_2978914_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZX33433.1|2978924_2980052_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
AZX33434.1|2981129_2982368_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33435.1|2982409_2983672_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX33436.1|2983678_2984431_+	DNA-binding protein	NA	NA	NA	NA	NA
AZX33437.1|2984482_2984668_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33438.1|2984943_2985408_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
AZX33439.1|2985439_2986099_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AZX33440.1|2986243_2988352_+	AsmA family protein	NA	NA	NA	NA	NA
AZX33441.1|2988348_2989299_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33442.1|2989402_2990023_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX34528.1|2990126_2990867_+	oxidoreductase	NA	NA	NA	NA	NA
AZX33443.1|2992001_2993126_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33444.1|2993171_2993540_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33445.1|2993781_2994732_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33446.1|2995767_2996310_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33447.1|2996514_2996709_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33448.1|2996695_2997646_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	3186566	3247596	4110592	transposase	Xanthomonas_phage(50.0%)	49	NA	NA
AZX33599.1|3186566_3187517_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33600.1|3187525_3188074_+	phospholipid:lipid A palmitoyltransferase	NA	NA	NA	NA	NA
AZX33601.1|3188070_3188679_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZX33602.1|3188861_3189332_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX33603.1|3189338_3190598_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
AZX33604.1|3190650_3191463_-	oxidoreductase	NA	NA	NA	NA	NA
AZX33605.1|3191577_3192132_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZX33606.1|3192141_3193131_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX33607.1|3193310_3194030_-	VOC family protein	NA	NA	NA	NA	NA
AZX33608.1|3194046_3196782_-	protein translocase subunit SecA	NA	NA	NA	NA	NA
AZX33609.1|3196961_3197948_-	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	51.8	3.4e-27
AZX33610.1|3197989_3198484_+	DUF721 domain-containing protein	NA	NA	NA	NA	NA
AZX33611.1|3198595_3199519_-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
AZX33612.1|3199747_3200932_-	cell division protein FtsZ	NA	NA	NA	NA	NA
AZX33613.1|3201120_3202347_-	cell division protein FtsA	NA	NA	NA	NA	NA
AZX33614.1|3202351_3203173_-	cell division protein FtsQ	NA	NA	NA	NA	NA
AZX33615.1|3203185_3204136_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
AZX33616.1|3204132_3205539_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
AZX33617.1|3205535_3206609_-	undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	NA	NA	NA	NA	NA
AZX33618.1|3206605_3207799_-	putative lipid II flippase FtsW	NA	NA	NA	NA	NA
AZX33619.1|3207795_3209328_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
AZX33620.1|3209324_3210494_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
AZX33621.1|3210483_3213321_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
AZX34544.1|3213317_3215018_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
AZX33622.1|3215044_3215323_-	cell division protein FtsL	NA	NA	NA	NA	NA
AZX33623.1|3215322_3216417_-	ribosomal RNA small subunit methyltransferase H	NA	NA	NA	NA	NA
AZX33624.1|3216425_3216917_-	transcriptional regulator MraZ	NA	NA	NA	NA	NA
AZX33625.1|3217656_3219465_+	ABC transporter ATP-binding protein	NA	A0A1B0RXA0	Streptococcus_phage	28.6	1.6e-43
AZX33626.1|3219504_3220584_-	dihydroorotase	NA	NA	NA	NA	NA
AZX33627.1|3220580_3221774_-	amidohydrolase	NA	NA	NA	NA	NA
AZX33628.1|3221923_3222202_+	DNA topoisomerase III	NA	NA	NA	NA	NA
AZX33629.1|3222531_3222924_-	hypothetical protein	NA	NA	NA	NA	NA
AZX34545.1|3229648_3230125_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX33630.1|3230277_3231390_+	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA	NA
AZX33631.1|3231457_3232018_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA	NA
AZX33632.1|3232041_3232374_-	cytochrome C	NA	NA	NA	NA	NA
AZX33633.1|3232357_3234046_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AZX33634.1|3234165_3234954_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
AZX33635.1|3235661_3236612_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33636.1|3237056_3237368_-	cell division protein ZapA	NA	NA	NA	NA	NA
AZX33637.1|3237367_3237898_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33638.1|3238060_3239011_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33639.1|3239109_3240060_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33640.1|3240349_3240814_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
AZX33641.1|3240828_3242334_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
AZX33642.1|3242587_3244195_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZX33643.1|3244250_3245156_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX33644.1|3245596_3246547_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33645.1|3246645_3247596_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	3269321	3307736	4110592	holin,transposase	Tupanvirus(16.67%)	36	NA	NA
AZX33667.1|3269321_3269657_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZX33668.1|3269656_3270499_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
AZX33669.1|3270597_3271548_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33670.1|3271612_3272584_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33671.1|3272647_3273667_-	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
AZX34548.1|3273668_3275042_-	MFS transporter	NA	NA	NA	NA	NA
AZX33672.1|3275319_3276000_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
AZX33673.1|3276012_3278139_+	lytic transglycosylase	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.5e-14
AZX33674.1|3278135_3279230_+	CCA-adding enzyme	NA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
AZX33675.1|3279244_3280504_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX33676.1|3280523_3282248_-	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	9.5e-49
AZX33677.1|3282486_3283239_-	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
AZX33678.1|3283377_3284328_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34549.1|3284640_3286119_+	phospholipase D family protein	NA	NA	NA	NA	NA
AZX33679.1|3286125_3287235_-	molybdenum import ATP-binding protein ModC	NA	G9BWD6	Planktothrix_phage	34.5	7.5e-23
AZX33680.1|3287246_3287927_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
AZX33681.1|3287948_3288704_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX34550.1|3288839_3289724_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX33682.1|3289811_3290393_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33683.1|3290485_3290608_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33684.1|3290653_3290953_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX34551.1|3291104_3291530_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33685.1|3293736_3294240_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX33686.1|3294255_3295206_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33687.1|3295192_3295390_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33688.1|3295733_3296507_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX33689.1|3296639_3297650_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX33690.1|3297801_3299457_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZX33691.1|3299511_3299853_-	cupin domain-containing protein	NA	NA	NA	NA	NA
AZX33692.1|3299866_3301306_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX33693.1|3301438_3302254_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33694.1|3302272_3302461_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33695.1|3302447_3303398_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33696.1|3304785_3305733_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33697.1|3305959_3306700_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33698.1|3306785_3307736_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	3383143	3503388	4110592	transposase,tRNA	Acinetobacter_phage(20.0%)	101	NA	NA
AZX33750.1|3383143_3384094_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33751.1|3384498_3385143_-	urease accessory protein UreG	NA	NA	NA	NA	NA
AZX33752.1|3385167_3385752_-	urease accessory protein UreF	NA	NA	NA	NA	NA
AZX33753.1|3385852_3386470_-	urease accessory protein UreE	NA	NA	NA	NA	NA
AZX33754.1|3386472_3388188_-	urease subunit alpha	NA	NA	NA	NA	NA
AZX33755.1|3388184_3388493_-	urease subunit beta	NA	NA	NA	NA	NA
AZX33756.1|3388509_3389145_-	urease accessory protein UreJ	NA	NA	NA	NA	NA
AZX33757.1|3389171_3389474_-	urease subunit gamma	NA	NA	NA	NA	NA
AZX33758.1|3389574_3390429_-	urease accessory protein UreD	NA	NA	NA	NA	NA
AZX33759.1|3391010_3391283_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AZX33760.1|3391700_3392108_-	GFA family protein	NA	NA	NA	NA	NA
AZX33761.1|3392477_3393272_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33762.1|3393372_3394608_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZX33763.1|3394676_3395693_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX33764.1|3395689_3397081_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX33765.1|3397077_3398274_+	MFS transporter	NA	NA	NA	NA	NA
AZX33766.1|3398270_3399809_-	SpoVR family protein	NA	NA	NA	NA	NA
AZX33767.1|3399805_3401065_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33768.1|3403005_3403956_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33769.1|3404722_3405817_-	CoA transferase	NA	NA	NA	NA	NA
AZX33770.1|3405809_3407144_-	CoA ligase	NA	NA	NA	NA	NA
AZX33771.1|3407097_3407781_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33772.1|3407806_3408970_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX33773.1|3408966_3409968_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX33774.1|3409967_3410840_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX33775.1|3410836_3411586_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
AZX33776.1|3411582_3412374_-	ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
AZX33777.1|3412370_3413510_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX33778.1|3413818_3414571_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX33779.1|3414604_3415387_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX33780.1|3415390_3415780_+	DNA-binding protein	NA	NA	NA	NA	NA
AZX33781.1|3416919_3417783_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX33782.1|3417818_3418907_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33783.1|3418903_3419854_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33784.1|3419840_3420209_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33785.1|3420207_3423186_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33786.1|3424112_3424991_+	fatty acid desaturase	NA	NA	NA	NA	NA
AZX33787.1|3425955_3426906_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33788.1|3426892_3427072_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33789.1|3427988_3428939_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33790.1|3428935_3429403_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
AZX33791.1|3429445_3430216_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX33792.1|3430236_3431037_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AZX33793.1|3431047_3432457_+	lytic transglycosylase	NA	NA	NA	NA	NA
AZX33794.1|3432551_3433337_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZX34555.1|3433576_3434593_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX33795.1|3434700_3435093_-	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AZX33796.1|3435230_3435911_+	DUF533 domain-containing protein	NA	NA	NA	NA	NA
AZX33797.1|3435915_3436914_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX33798.1|3436982_3437933_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33799.1|3439437_3440139_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
AZX33800.1|3440138_3441563_+	ATP-binding protein	NA	NA	NA	NA	NA
AZX33801.1|3442632_3443973_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX33802.1|3444088_3445852_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
AZX33803.1|3445963_3446842_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
AZX33804.1|3446954_3447770_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
AZX33805.1|3447773_3448025_+	cell division topological specificity factor	NA	NA	NA	NA	NA
AZX34556.1|3448109_3449126_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX33806.1|3449456_3449678_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33807.1|3452038_3452956_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX33808.1|3453453_3454662_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX33809.1|3454741_3456313_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX33810.1|3456430_3457366_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AZX33811.1|3457554_3458499_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
AZX33812.1|3458567_3458783_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33813.1|3459066_3464784_+	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
AZX33814.1|3464789_3465917_+	aminodeoxychorismate synthase, component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
AZX33815.1|3465972_3466599_+	aminotransferase	NA	NA	NA	NA	NA
AZX34557.1|3466870_3467887_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX33816.1|3467982_3468693_-	oxidoreductase	NA	NA	NA	NA	NA
AZX34558.1|3468689_3469679_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX33817.1|3469810_3471406_+	acyl-CoA synthetase	NA	NA	NA	NA	NA
AZX33818.1|3471408_3472146_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33819.1|3472301_3473174_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AZX33820.1|3473442_3474663_+	MFS transporter	NA	NA	NA	NA	NA
AZX33821.1|3474659_3475319_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZX33822.1|3475390_3476023_+	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AZX33823.1|3476052_3476571_+	flavin reductase	NA	NA	NA	NA	NA
AZX33824.1|3476581_3477691_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX33825.1|3477737_3478592_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AZX33826.1|3478593_3479496_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33827.1|3480718_3481669_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33828.1|3483425_3484415_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33829.1|3484590_3485379_-	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
AZX33830.1|3485375_3486407_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
AZX33831.1|3486425_3486989_-	type 1 glutamine amidotransferase	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
AZX33832.1|3487044_3488565_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
AZX33833.1|3488828_3489533_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZX33834.1|3489540_3490278_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AZX33835.1|3490383_3490758_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AZX33836.1|3490800_3492090_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33837.1|3492086_3493256_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA	NA
AZX33838.1|3493252_3494092_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
AZX33839.1|3494151_3495087_+	hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
AZX33840.1|3495099_3496050_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33841.1|3496148_3497111_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
AZX33842.1|3497142_3497502_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AZX33843.1|3497626_3498529_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
AZX33844.1|3498530_3500303_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
AZX33845.1|3500337_3501114_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX33846.1|3502437_3503388_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 31
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	3518326	3576399	4110592	transposase,tRNA	Planktothrix_phage(12.5%)	47	NA	NA
AZX33858.1|3518326_3519277_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33859.1|3519405_3520539_-	peptidase	NA	NA	NA	NA	NA
AZX33860.1|3520582_3521488_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX33861.1|3521490_3523191_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
AZX33862.1|3523187_3524108_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX33863.1|3524115_3525093_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX33864.1|3525151_3526186_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
AZX33865.1|3528160_3528397_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33866.1|3528523_3529387_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
AZX33867.1|3529475_3530297_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX33868.1|3530376_3531114_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX33869.1|3531110_3532103_-	nitronate monooxygenase	NA	NA	NA	NA	NA
AZX33870.1|3532216_3532879_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33871.1|3532923_3534072_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX33872.1|3536395_3537346_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33873.1|3537686_3538637_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33874.1|3538735_3539686_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33875.1|3539982_3540480_+	hypothetical protein	NA	NA	NA	NA	NA
AZX33876.1|3540522_3542298_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
AZX34561.1|3542344_3543172_+	copper resistance protein B	NA	NA	NA	NA	NA
AZX33877.1|3543178_3543913_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX33878.1|3545082_3545877_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX33879.1|3546166_3546757_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZX33880.1|3546790_3548119_-	amidase	NA	NA	NA	NA	NA
AZX33881.1|3548193_3549339_-	transporter	NA	NA	NA	NA	NA
AZX33882.1|3549450_3550449_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33883.1|3550411_3550846_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
AZX33884.1|3552362_3553247_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX33885.1|3553243_3554449_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
AZX33886.1|3554445_3555306_-	endonuclease	NA	NA	NA	NA	NA
AZX33887.1|3555418_3557209_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
AZX33888.1|3557249_3557915_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
AZX33889.1|3557915_3558224_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
AZX34562.1|3558389_3559676_-	hypothetical protein	NA	NA	NA	NA	NA
AZX33890.1|3561109_3562060_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX33891.1|3564011_3565226_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
AZX33892.1|3565331_3566321_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
AZX33893.1|3566317_3566926_+	hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
AZX33894.1|3566938_3567568_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AZX33895.1|3567564_3568185_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
AZX33896.1|3568216_3569008_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
AZX33897.1|3569850_3570315_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AZX33898.1|3570333_3571260_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AZX33899.1|3571313_3572600_-	cytochrome c	NA	NA	NA	NA	NA
AZX33900.1|3573530_3574403_+	RNase adaptor protein RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
AZX33901.1|3574399_3575350_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
AZX33902.1|3575448_3576399_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 33
CP025361	Bordetella pertussis strain H811 chromosome, complete genome	4110592	4009660	4074572	4110592	transposase	Planktothrix_phage(40.0%)	58	NA	NA
AZX34292.1|4009660_4010146_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34293.1|4010364_4011345_+	protein BugT	NA	NA	NA	NA	NA
AZX34294.1|4011611_4012421_+	Pertussis toxin subunit 1	NA	NA	NA	NA	NA
AZX34295.1|4012460_4013141_+	Pertussis toxin subunit 2	NA	NA	NA	NA	NA
AZX34296.1|4013134_4013593_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
AZX34297.1|4013604_4013967_+	Pertussis toxin subunit 5	NA	NA	NA	NA	NA
AZX34298.1|4014049_4014733_+	Pertussis toxin subunit 3	NA	NA	NA	NA	NA
AZX34299.1|4014788_4015097_+	type IV secretion protein A	NA	NA	NA	NA	NA
AZX34300.1|4015115_4015430_+	type IV secretion protein B	NA	NA	NA	NA	NA
AZX34301.1|4015426_4017901_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
AZX34302.1|4017908_4019300_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
AZX34303.1|4019296_4019482_+	type IV secretion protein I	NA	NA	NA	NA	NA
AZX34304.1|4019460_4020162_+	type IV secretion protein E	NA	NA	NA	NA	NA
AZX34305.1|4020158_4020980_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
AZX34583.1|4020960_4022085_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
AZX34306.1|4022077_4023097_+	type IV secretion protein H	NA	NA	NA	NA	NA
AZX34307.1|4023302_4024337_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX34584.1|4024437_4025229_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX34308.1|4025311_4025686_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
AZX34309.1|4025663_4027073_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
AZX34310.1|4027065_4028448_+	DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
AZX34311.1|4028782_4030387_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX34312.1|4030422_4031436_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX34313.1|4031446_4032373_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX34314.1|4032763_4033714_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34315.1|4033883_4035110_+	bifunctional glutamate N-acetyltransferase/amino-acid N-acetyltransferase	NA	NA	NA	NA	NA
AZX34316.1|4035309_4036176_+	DUF815 domain-containing protein	NA	NA	NA	NA	NA
AZX34317.1|4036168_4037131_+	NUDIX domain-containing protein	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
AZX34318.1|4037231_4038182_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34319.1|4038280_4039231_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34320.1|4039329_4040280_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX34321.1|4040276_4041770_-	RND transporter	NA	NA	NA	NA	NA
AZX34322.1|4041766_4044874_-	multidrug transporter subunit MdtC	NA	NA	NA	NA	NA
AZX34323.1|4044870_4047939_-	multidrug transporter subunit MdtB	NA	NA	NA	NA	NA
AZX34324.1|4047935_4049186_-	multidrug transporter subunit MdtA	NA	NA	NA	NA	NA
AZX34325.1|4049366_4050128_-	cell division protein ZapD	NA	NA	NA	NA	NA
AZX34326.1|4050160_4050811_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
AZX34327.1|4050813_4051653_-	prepilin peptidase	NA	NA	NA	NA	NA
AZX34328.1|4051893_4052637_+	hypothetical protein	NA	NA	NA	NA	NA
AZX34329.1|4052719_4053067_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AZX34330.1|4053164_4054007_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AZX34331.1|4054051_4054939_-	segregation/condensation protein A	NA	NA	NA	NA	NA
AZX34332.1|4054965_4055154_-	DUF3460 domain-containing protein	NA	NA	NA	NA	NA
AZX34333.1|4055251_4056709_+	MFS transporter	NA	NA	NA	NA	NA
AZX34334.1|4056695_4058222_+	glycerol kinase	NA	NA	NA	NA	NA
AZX34335.1|4058240_4058708_-	hypothetical protein	NA	NA	NA	NA	NA
AZX34336.1|4058707_4059730_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX34337.1|4059850_4060591_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
AZX34338.1|4060645_4061746_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX34339.1|4061747_4062938_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX34340.1|4063057_4064074_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
AZX34341.1|4064392_4065064_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
AZX34342.1|4065060_4065969_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX34343.1|4066180_4066828_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
AZX34344.1|4070679_4071756_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AZX34345.1|4071766_4072576_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX34346.1|4072665_4073439_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX34347.1|4073621_4074572_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
