The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	0	66153	4106930	transposase,tRNA,protease	Natrialba_phage(12.5%)	57	NA	NA
AZX52547.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AZX52548.1|1916_2609_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA	NA
AZX52549.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
AZX52550.1|3409_4171_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX52551.1|4214_5132_+	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
AZX52552.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
AZX52553.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AZX52554.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
AZX52555.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AZX52556.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AZX52557.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
AZX52558.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AZX52559.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
AZX52560.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
AZX55937.1|20126_20531_-	lipoprotein	NA	NA	NA	NA	NA
AZX52561.1|20771_21947_+	hypothetical protein	NA	NA	NA	NA	NA
AZX52562.1|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
AZX52563.1|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX52564.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52565.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
AZX52566.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
AZX52567.1|29141_30368_-	thiolase family protein	NA	NA	NA	NA	NA
AZX52568.1|30364_30862_-	dehydratase	NA	NA	NA	NA	NA
AZX55938.1|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX52569.1|32163_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX52570.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX52571.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52572.1|35674_36625_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52573.1|36621_37812_-	MFS transporter	NA	NA	NA	NA	NA
AZX52574.1|37998_38973_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AZX52575.1|38974_41113_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZX52576.1|41109_41649_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AZX52577.1|41652_42381_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZX52578.1|42367_43261_+	M48 family peptidase	NA	NA	NA	NA	NA
AZX52579.1|43331_43727_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
AZX52580.1|43736_44267_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
AZX52581.1|44395_44695_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
AZX52582.1|44712_45663_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52583.1|45761_46712_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52584.1|47211_47847_+	hypothetical protein	NA	NA	NA	NA	NA
AZX52585.1|47818_48055_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZX52586.1|48182_49076_+	hypothetical protein	NA	NA	NA	NA	NA
AZX52587.1|50245_51493_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AZX52588.1|51489_52104_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
AZX52589.1|52239_53190_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52590.1|53232_54489_+	MFS transporter	NA	NA	NA	NA	NA
AZX52591.1|55720_56455_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
AZX52592.1|56460_57051_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
AZX52593.1|57075_57765_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX52594.1|57761_58523_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX52595.1|58602_59502_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX52596.1|59595_60546_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52597.1|61346_62573_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AZX52598.1|62572_62992_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX52599.1|63175_64117_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55939.1|64540_65377_-	hypothetical protein	NA	NA	NA	NA	NA
AZX52600.1|65571_66153_-|protease	protease	protease	NA	NA	NA	NA
>prophage 2
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	71183	124171	4106930	transposase,tRNA	Planktothrix_phage(20.0%)	51	NA	NA
AZX52605.1|71183_72134_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52606.1|72227_72542_+|transposase	transposase	transposase	NA	NA	NA	NA
AZX52607.1|73734_75642_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
AZX52608.1|75803_76424_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX52609.1|76455_77037_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
AZX52610.1|77125_77377_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55940.1|77378_78128_-	hypothetical protein	NA	NA	NA	NA	NA
AZX52611.1|78326_79736_+	signal recognition particle protein	NA	NA	NA	NA	NA
AZX52612.1|79732_80683_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55941.1|80757_81702_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52613.1|81698_83573_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
AZX52614.1|84920_85625_-	DUF2837 domain-containing protein	NA	NA	NA	NA	NA
AZX52615.1|85621_86728_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AZX52616.1|86989_87583_-	sugar transferase	NA	NA	NA	NA	NA
AZX52617.1|87579_88812_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA	NA
AZX52618.1|88829_90089_-	glycosyltransferase WbuB	NA	NA	NA	NA	NA
AZX52619.1|90112_91201_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
AZX52620.1|91208_92309_-	aminotransferase DegT	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
AZX52621.1|92312_92888_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX52622.1|92891_93944_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
AZX52623.1|94074_95082_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
AZX52624.1|95083_96370_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AZX52625.1|96386_96542_-	hypothetical protein	NA	NA	NA	NA	NA
AZX52626.1|96566_97370_-	type III pantothenate kinase	NA	NA	NA	NA	NA
AZX52627.1|97366_98233_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AZX52628.1|98301_99438_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX52629.1|99437_100277_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
AZX52630.1|101209_101812_+	hypothetical protein	NA	NA	NA	NA	NA
AZX52631.1|101841_102495_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX52632.1|102627_103884_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
AZX52633.1|103886_104831_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
AZX52634.1|104906_105182_+	DUF493 domain-containing protein	NA	NA	NA	NA	NA
AZX52635.1|105189_105852_+	octanoyltransferase	NA	NA	NA	NA	NA
AZX52636.1|105913_106915_+	lipoyl synthase	NA	NA	NA	NA	NA
AZX52637.1|106929_107478_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
AZX52638.1|107535_108432_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
AZX52639.1|108428_109490_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
AZX52640.1|109525_110476_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52641.1|111375_112569_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZX52642.1|112650_113280_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA	NA
AZX52643.1|113341_114025_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
AZX52644.1|114034_115717_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AZX55942.1|116004_116352_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
AZX52645.1|116442_116760_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55943.1|117042_118059_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX52646.1|118134_118935_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZX52647.1|118931_119807_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZX52648.1|119817_121110_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX52649.1|121152_122193_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
AZX52650.1|122298_123120_-	phosphodiesterase	NA	NA	NA	NA	NA
AZX52651.1|123220_124171_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	137255	209734	4106930	transposase,tRNA	Bacillus_phage(16.67%)	60	NA	NA
AZX52660.1|137255_138206_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52661.1|138624_140133_-	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA	NA
AZX52662.1|140879_144842_+	FAD-linked oxidase	NA	NA	NA	NA	NA
AZX52663.1|144894_145677_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX52664.1|145764_146988_-	CoA transferase	NA	NA	NA	NA	NA
AZX55946.1|146971_147904_-	lipase	NA	NA	NA	NA	NA
AZX52665.1|147909_148722_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX52666.1|148742_149186_-	hypothetical protein	NA	NA	NA	NA	NA
AZX52667.1|149204_149963_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55947.1|150035_150959_-	hypothetical protein	NA	NA	NA	NA	NA
AZX52668.1|151125_151908_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX52669.1|152674_153655_-	carboxylase	NA	NA	NA	NA	NA
AZX52670.1|153651_154380_-	allophanate hydrolase subunit 1	NA	NA	NA	NA	NA
AZX52671.1|154404_154836_-	glyoxalase	NA	NA	NA	NA	NA
AZX52672.1|154937_155813_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX52673.1|155864_157085_-	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	42.6	3.2e-91
AZX52674.1|157168_157630_-	metal-binding protein	NA	NA	NA	NA	NA
AZX52675.1|157735_159133_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AZX52676.1|159129_159807_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	35.2	1.5e-29
AZX52677.1|159862_161173_-	phosphate regulon sensor histidine kinase PhoR	NA	A0A1V0SGX0	Hokovirus	25.5	6.2e-16
AZX52678.1|161184_161883_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	37.1	8.6e-33
AZX52679.1|162046_162823_+	ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE	NA	NA	NA	NA	NA
AZX52680.1|162988_164011_+	Tim44 domain-containing protein	NA	NA	NA	NA	NA
AZX52681.1|164239_164875_+	hypothetical protein	NA	NA	NA	NA	NA
AZX52682.1|164871_166434_+	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	A0A2N9QVT9	Dishui_lake_phycodnavirus	28.7	1.0e-33
AZX52683.1|166992_167943_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52684.1|169386_170289_-	hypothetical protein	NA	NA	NA	NA	NA
AZX52685.1|170266_170896_-	LemA family protein	NA	NA	NA	NA	NA
AZX52686.1|171226_172609_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
AZX52687.1|172642_173272_+	threonine transporter RhtB	NA	NA	NA	NA	NA
AZX52688.1|173320_174928_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
AZX52689.1|174952_175636_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55948.1|175717_176194_-	bacterioferritin	NA	NA	NA	NA	NA
AZX52690.1|176400_177351_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52691.1|178466_178994_+	lipoprotein	NA	NA	NA	NA	NA
AZX52692.1|179085_179901_+	lipoprotein	NA	NA	NA	NA	NA
AZX52693.1|179961_180696_+	sulfurtransferase	NA	NA	NA	NA	NA
AZX52694.1|180733_182812_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
AZX52695.1|183061_183334_-	hypothetical protein	NA	NA	NA	NA	NA
AZX52696.1|183432_184521_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AZX52697.1|184524_186429_+	outer membrane protein assembly factor	NA	NA	NA	NA	NA
AZX52698.1|186425_190100_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
AZX52699.1|190160_190724_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
AZX52700.1|190731_191154_-	glyoxalase	NA	NA	NA	NA	NA
AZX52701.1|191181_191601_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
AZX55949.1|191629_192076_-	N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
AZX52702.1|192202_192700_+	hypothetical protein	NA	NA	NA	NA	NA
AZX52703.1|192854_195125_+	lysine decarboxylase	NA	NA	NA	NA	NA
AZX52704.1|195173_196406_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX52705.1|196504_197455_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52706.1|197553_198504_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52707.1|198549_199242_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
AZX52708.1|199238_200132_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AZX52709.1|200526_201627_+	aminomethyltransferase	NA	NA	NA	NA	NA
AZX52710.1|201708_202083_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
AZX52711.1|202142_205007_+	glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
AZX52712.1|205151_205892_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX52713.1|205961_207173_+	CoA transferase	NA	NA	NA	NA	NA
AZX52714.1|207201_208170_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX52715.1|208783_209734_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	218813	281239	4106930	transposase,tRNA,protease	uncultured_Caudovirales_phage(22.22%)	49	NA	NA
AZX52726.1|218813_221609_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
AZX52727.1|222202_225145_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AZX52728.1|225216_225936_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
AZX52729.1|225974_226523_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
AZX52730.1|226677_227577_+	virginiamycin B lyase	NA	NA	NA	NA	NA
AZX52731.1|227601_228552_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52732.1|228538_228718_-	hypothetical protein	NA	NA	NA	NA	NA
AZX52733.1|228770_229466_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX52734.1|229482_230895_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AZX52735.1|231007_232438_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AZX52736.1|232479_234393_-	phosphomethylpyrimidine synthase	NA	NA	NA	NA	NA
AZX52737.1|234711_235278_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
AZX52738.1|235368_236370_+	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
AZX52739.1|236484_237435_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52740.1|237521_238472_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52741.1|238468_239419_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52742.1|239517_240315_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX52743.1|241264_241675_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
AZX52744.1|242696_243440_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX52745.1|243483_244527_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX52746.1|244697_246800_+	hypothetical protein	NA	NA	NA	NA	NA
AZX52747.1|248210_249167_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX52748.1|249185_249677_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AZX52749.1|249673_251029_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
AZX52750.1|251029_251728_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AZX52751.1|251724_252426_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
AZX52752.1|252678_253728_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
AZX52753.1|253833_254775_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AZX52754.1|254771_256661_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
AZX52755.1|256747_257386_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55951.1|257528_258773_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.1e-17
AZX52756.1|258844_259381_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AZX52757.1|259532_260924_+	class II fumarate hydratase	NA	NA	NA	NA	NA
AZX52758.1|260940_261921_-	AEC family transporter	NA	NA	NA	NA	NA
AZX52759.1|262056_263040_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
AZX52760.1|263104_264004_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX52761.1|264110_265865_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZX52762.1|265872_266997_-	CoA transferase	NA	NA	NA	NA	NA
AZX52763.1|267010_267991_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX52764.1|268721_269672_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX52765.1|270231_270777_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX52766.1|270860_272480_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX52767.1|272495_273650_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AZX52768.1|273663_273789_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
AZX52769.1|273785_275537_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
AZX52770.1|275533_277213_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
AZX52771.1|277248_277824_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
AZX52772.1|278966_279245_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX52773.1|280288_281239_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	558457	617757	4106930	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
AZX53006.1|558457_559408_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53007.1|560731_561508_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX53008.1|561542_563315_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
AZX53009.1|563316_564219_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
AZX53010.1|564343_564703_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AZX53011.1|564734_565697_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
AZX53012.1|565795_566746_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53013.1|566758_567694_-	hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
AZX53014.1|567753_568593_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
AZX53015.1|568589_569759_-	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA	NA
AZX53016.1|569755_571045_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53017.1|571087_571462_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AZX53018.1|571567_572305_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AZX53019.1|572312_573017_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZX53020.1|573280_574801_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
AZX53021.1|574856_575420_+	type 1 glutamine amidotransferase	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
AZX53022.1|575438_576470_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
AZX53023.1|576466_577255_+	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
AZX53024.1|577430_578420_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53025.1|580176_581127_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53026.1|582349_583252_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53027.1|583253_584108_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AZX53028.1|584154_585264_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX53029.1|585274_585793_-	flavin reductase	NA	NA	NA	NA	NA
AZX53030.1|585822_586455_-	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AZX53031.1|586526_587186_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZX53032.1|587182_588403_-	MFS transporter	NA	NA	NA	NA	NA
AZX53033.1|588671_589544_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AZX53034.1|589699_590437_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53035.1|590439_592035_-	acyl-CoA synthetase	NA	NA	NA	NA	NA
AZX55973.1|592166_593156_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX53036.1|593152_593863_+	oxidoreductase	NA	NA	NA	NA	NA
AZX55974.1|593958_594975_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX53037.1|595246_595873_-	aminotransferase	NA	NA	NA	NA	NA
AZX53038.1|595928_597056_-	aminodeoxychorismate synthase, component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
AZX53039.1|597061_602779_-	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
AZX53040.1|603062_603278_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53041.1|603346_604291_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
AZX53042.1|604479_605415_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AZX53043.1|605532_607104_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53044.1|607183_608392_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX53045.1|608889_609807_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX53046.1|612167_612389_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55975.1|612719_613736_+|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX53047.1|613820_614072_-	cell division topological specificity factor	NA	NA	NA	NA	NA
AZX53048.1|614075_614891_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
AZX53049.1|615003_615882_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
AZX53050.1|615993_617757_-|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
>prophage 7
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	623912	677653	4106930	transposase	Salmonella_phage(33.33%)	48	NA	NA
AZX53054.1|623912_624863_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53055.1|624931_625930_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX53056.1|625934_626615_-	DUF533 domain-containing protein	NA	NA	NA	NA	NA
AZX53057.1|626752_627145_+	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AZX55976.1|627252_628269_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX53058.1|628508_629294_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZX53059.1|629388_630798_-	lytic transglycosylase	NA	NA	NA	NA	NA
AZX53060.1|630808_631609_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AZX53061.1|631629_632400_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX53062.1|632442_632910_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
AZX53063.1|632906_633857_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53064.1|635805_636684_-	fatty acid desaturase	NA	NA	NA	NA	NA
AZX53065.1|637610_640589_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53066.1|640587_640956_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53067.1|640942_641893_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53068.1|641889_642978_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53069.1|643013_643877_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX53070.1|645016_645406_-	DNA-binding protein	NA	NA	NA	NA	NA
AZX53071.1|645409_646192_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX53072.1|646225_646978_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX53073.1|647286_648426_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53074.1|648422_649214_+	ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
AZX53075.1|649210_649960_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
AZX53076.1|649956_650829_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX53077.1|650828_651830_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX53078.1|651826_652990_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX53079.1|653015_653699_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53080.1|653652_654987_+	CoA ligase	NA	NA	NA	NA	NA
AZX53081.1|654979_656074_+	CoA transferase	NA	NA	NA	NA	NA
AZX55977.1|656840_657791_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53082.1|659731_660991_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53083.1|660987_662526_+	SpoVR family protein	NA	NA	NA	NA	NA
AZX53084.1|662522_663719_-	MFS transporter	NA	NA	NA	NA	NA
AZX53085.1|663715_665107_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX53086.1|665103_666120_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX53087.1|666188_667424_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZX53088.1|667524_668319_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53089.1|668688_669096_+	GFA family protein	NA	NA	NA	NA	NA
AZX53090.1|669513_669786_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AZX53091.1|670367_671222_+	urease accessory protein UreD	NA	NA	NA	NA	NA
AZX53092.1|671322_671625_+	urease subunit gamma	NA	NA	NA	NA	NA
AZX53093.1|671651_672287_+	urease accessory protein UreJ	NA	NA	NA	NA	NA
AZX53094.1|672303_672612_+	urease subunit beta	NA	NA	NA	NA	NA
AZX53095.1|672608_674324_+	urease subunit alpha	NA	NA	NA	NA	NA
AZX53096.1|674326_674944_+	urease accessory protein UreE	NA	NA	NA	NA	NA
AZX53097.1|675044_675629_+	urease accessory protein UreF	NA	NA	NA	NA	NA
AZX53098.1|675653_676298_+	urease accessory protein UreG	NA	NA	NA	NA	NA
AZX53099.1|676702_677653_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	726540	766540	4106930	transposase,tRNA,integrase,protease	Pseudomonas_phage(33.33%)	31	723839:723857	743727:743745
723839:723857	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
AZX53136.1|726540_727188_+|tRNA	peptidyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AZX53137.1|727184_727967_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AZX53138.1|728039_729131_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
AZX53139.1|729410_730538_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
AZX53140.1|730879_731926_+	Fic family protein	NA	NA	NA	NA	NA
AZX55980.1|731936_732077_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
AZX53141.1|732073_735193_+	restriction endonuclease	NA	NA	NA	NA	NA
AZX53142.1|735194_738146_+	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
AZX53143.1|738161_739373_+	chromosome segregation protein SMC	NA	NA	NA	NA	NA
AZX53144.1|739369_739570_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53145.1|739556_740507_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53146.1|740523_741018_+	DUF4276 domain-containing protein	NA	NA	NA	NA	NA
AZX53147.1|741021_741279_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53148.1|741303_742734_+	ATP-dependent helicase	NA	NA	NA	NA	NA
AZX53149.1|742815_743100_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
AZX53150.1|743883_744834_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
743727:743745	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
AZX53151.1|745252_747817_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZX53152.1|747861_749715_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53153.1|750047_751619_+	winged helix family transcriptional regulator	NA	NA	NA	NA	NA
AZX53154.1|753060_754011_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53155.1|754096_754837_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53156.1|755063_756011_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53157.1|758334_758523_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53158.1|758541_759357_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53159.1|759489_760929_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX53160.1|760942_761284_+	cupin domain-containing protein	NA	NA	NA	NA	NA
AZX53161.1|761338_762994_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZX53162.1|763145_764156_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX53163.1|764288_765062_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53164.1|765405_765603_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53165.1|765589_766540_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	776467	823036	4106930	transposase,holin	Bovine_alphaherpesvirus(10.0%)	45	NA	NA
AZX53173.1|776467_777418_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53174.1|777556_778309_+	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
AZX53175.1|778547_780272_+	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	9.5e-49
AZX53176.1|780291_781551_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX53177.1|781565_782660_-	CCA-adding enzyme	NA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
AZX53178.1|782656_784783_-	lytic transglycosylase	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.5e-14
AZX53179.1|784795_785476_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
AZX55984.1|785753_787127_+	MFS transporter	NA	NA	NA	NA	NA
AZX53180.1|787128_788148_+	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
AZX53181.1|788211_789183_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53182.1|789247_790198_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53183.1|790296_791139_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
AZX53184.1|791138_791474_-|holin	phage holin family protein	holin	NA	NA	NA	NA
AZX53185.1|791544_792963_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	29.4	8.7e-40
AZX53186.1|793242_794283_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AZX53187.1|794362_794614_-	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
AZX53188.1|794724_796023_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.9	1.6e-125
AZX53189.1|796171_797026_+	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA	NA
AZX53190.1|797022_797913_+	acyltransferase	NA	NA	NA	NA	NA
AZX53191.1|797955_798867_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
AZX53192.1|798893_799586_+	DUF484 domain-containing protein	NA	NA	NA	NA	NA
AZX53193.1|799600_800581_+	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	30.5	3.3e-14
AZX53194.1|800593_802735_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AZX53195.1|802783_803752_-	nickel transporter	NA	NA	NA	NA	NA
AZX55985.1|803742_804366_-	DUF1007 domain-containing protein	NA	NA	NA	NA	NA
AZX53196.1|804371_805307_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53197.1|805303_806200_-	metal ABC transporter permease	NA	NA	NA	NA	NA
AZX53198.1|806196_806919_-	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.0	1.1e-11
AZX53199.1|806909_807110_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53200.1|807247_807751_+	transcriptional repressor	NA	NA	NA	NA	NA
AZX53201.1|808027_809143_+	GTP-binding protein	NA	NA	NA	NA	NA
AZX53202.1|809285_809750_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
AZX53203.1|809897_810437_+	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
AZX53204.1|810458_811793_+	HslU--HslV peptidase ATPase subunit	NA	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
AZX55986.1|811806_812112_-	RND transporter	NA	NA	NA	NA	NA
AZX53205.1|812536_813118_+	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA	NA
AZX53206.1|813199_814150_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53207.1|814590_815496_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX53208.1|815551_817159_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZX53209.1|817412_818918_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
AZX53210.1|818932_819397_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
AZX53211.1|819686_820637_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53212.1|820799_821330_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53213.1|821329_821641_+	cell division protein ZapA	NA	NA	NA	NA	NA
AZX53214.1|822085_823036_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	1007251	1102337	4106930	transposase	Bacillus_virus(27.27%)	88	NA	NA
AZX53355.1|1007251_1008202_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53356.1|1008304_1008967_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53357.1|1009069_1009480_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53358.1|1009584_1010586_+	amidase	NA	NA	NA	NA	NA
AZX53359.1|1010588_1011785_+	CoA transferase	NA	NA	NA	NA	NA
AZX53360.1|1011805_1012609_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX53361.1|1012689_1012986_+	histidine kinase	NA	NA	NA	NA	NA
AZX53362.1|1013016_1013580_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX55999.1|1013620_1014478_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX53363.1|1014485_1015235_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
AZX53364.1|1015256_1016129_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53365.1|1016157_1016937_+	KR domain-containing protein	NA	NA	NA	NA	NA
AZX53366.1|1016970_1017768_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53367.1|1019219_1020392_+	hypothetical protein	NA	A0A2H4PQU7	Staphylococcus_phage	39.6	1.1e-59
AZX53368.1|1020422_1020815_+	RidA family protein	NA	NA	NA	NA	NA
AZX53369.1|1020808_1021669_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX53370.1|1021672_1022635_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX56000.1|1023411_1024101_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
AZX53371.1|1024961_1025912_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53372.1|1026261_1027131_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53373.1|1027201_1027897_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
AZX53374.1|1027886_1028396_+	nucleoside deaminase	NA	NA	NA	NA	NA
AZX53375.1|1028392_1029613_+	MFS transporter	NA	NA	NA	NA	NA
AZX53376.1|1029560_1030463_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53377.1|1031349_1032636_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53378.1|1032674_1034048_+	amidase	NA	NA	NA	NA	NA
AZX53379.1|1034086_1034788_-	riboflavin synthase	NA	NA	NA	NA	NA
AZX53380.1|1035086_1036076_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX53381.1|1036176_1036638_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX53382.1|1036653_1037202_-	cysteine dioxygenase	NA	NA	NA	NA	NA
AZX53383.1|1037343_1038819_-	long-chain fatty acid--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
AZX53384.1|1038924_1040016_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
AZX53385.1|1040019_1040802_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX53386.1|1040811_1041600_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
AZX53387.1|1042725_1043160_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX53388.1|1043156_1044167_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZX53389.1|1044210_1045137_-	VOC family protein	NA	NA	NA	NA	NA
AZX53390.1|1045423_1045792_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
AZX56001.1|1046008_1046959_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX56002.1|1046940_1049430_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.3e-86
AZX53391.1|1049478_1050171_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
AZX53392.1|1050243_1051443_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AZX53393.1|1051460_1052366_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53394.1|1052481_1053411_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX53395.1|1053436_1054783_+	MFS transporter	NA	NA	NA	NA	NA
AZX56003.1|1054810_1055560_+	NAD(P)-dependent oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
AZX53396.1|1055573_1056356_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX53397.1|1056548_1057499_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53398.1|1057560_1058706_-	porin	NA	NA	NA	NA	NA
AZX53399.1|1059182_1060019_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
AZX53400.1|1060088_1061054_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53401.1|1061050_1062001_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53402.1|1061987_1062182_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53403.1|1062386_1062929_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53404.1|1063964_1064915_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53405.1|1065156_1065525_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53406.1|1065570_1066695_+	hypothetical protein	NA	NA	NA	NA	NA
AZX56004.1|1067829_1068570_-	oxidoreductase	NA	NA	NA	NA	NA
AZX53407.1|1068673_1069294_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53408.1|1069397_1070348_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53409.1|1070344_1072453_-	AsmA family protein	NA	NA	NA	NA	NA
AZX53410.1|1072597_1073257_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AZX53411.1|1073288_1073753_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
AZX53412.1|1074028_1074214_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53413.1|1074265_1075018_-	DNA-binding protein	NA	NA	NA	NA	NA
AZX53414.1|1075024_1076287_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53415.1|1076328_1077567_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53416.1|1078644_1079772_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
AZX53417.1|1079782_1080610_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZX53418.1|1080596_1081463_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZX53419.1|1082829_1083234_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53420.1|1083325_1084276_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX56005.1|1084645_1085557_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX53421.1|1085571_1086282_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53422.1|1086278_1087523_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZX53423.1|1087524_1087959_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZX53424.1|1087987_1088293_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZX53425.1|1088391_1089342_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53426.1|1089440_1090391_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53427.1|1090447_1091596_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZX53428.1|1091676_1092627_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53429.1|1093158_1093956_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53430.1|1094003_1094657_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX53431.1|1094613_1095702_-	methionine import ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
AZX53432.1|1095866_1098092_-	glycosyl hydrolase	NA	NA	NA	NA	NA
AZX53433.1|1100369_1101266_+	inositol monophosphatase	NA	NA	NA	NA	NA
AZX53434.1|1101154_1101400_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53435.1|1101386_1102337_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	1132723	1203694	4106930	transposase,protease	uncultured_Mediterranean_phage(25.0%)	52	NA	NA
AZX53465.1|1132723_1133674_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53466.1|1133730_1134843_+	malate dehydrogenase	NA	NA	NA	NA	NA
AZX53467.1|1137226_1138177_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53468.1|1138767_1139544_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
AZX53469.1|1139661_1139925_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
AZX53470.1|1140025_1141030_-	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
AZX53471.1|1141230_1142832_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
AZX53472.1|1142857_1143616_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX53473.1|1143707_1144364_-	adenylate kinase	NA	NA	NA	NA	NA
AZX53474.1|1144454_1145219_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AZX53475.1|1145228_1145417_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53476.1|1145472_1146516_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AZX53477.1|1146512_1146926_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AZX53478.1|1146922_1147543_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AZX53479.1|1147823_1148774_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53480.1|1148941_1150333_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
AZX53481.1|1150405_1150984_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
AZX53482.1|1151100_1152498_+	chloride channel protein EriC	NA	NA	NA	NA	NA
AZX53483.1|1152613_1153819_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
AZX53484.1|1153918_1154437_-	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
AZX53485.1|1154531_1154777_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
AZX53486.1|1155004_1155319_+|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
AZX53487.1|1155408_1160598_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
AZX56006.1|1160594_1162763_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
AZX53488.1|1162782_1165134_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
AZX53489.1|1165138_1166458_+	paraquat-inducible membrane protein A	NA	NA	NA	NA	NA
AZX53490.1|1166476_1168150_+	MCE family protein	NA	NA	NA	NA	NA
AZX53491.1|1168154_1168823_+	lipoprotein	NA	NA	NA	NA	NA
AZX53492.1|1168979_1172801_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZX53493.1|1173131_1174082_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53494.1|1174103_1175249_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53495.1|1175397_1176327_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX53496.1|1176323_1177412_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX53497.1|1177408_1178212_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
AZX53498.1|1178208_1178940_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
AZX53499.1|1178997_1180287_-	MFS transporter	NA	NA	NA	NA	NA
AZX53500.1|1180383_1180986_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53501.1|1185539_1185878_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX53502.1|1186546_1186852_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53503.1|1188558_1189509_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53504.1|1189505_1190837_-	MFS transporter	NA	NA	NA	NA	NA
AZX53505.1|1192076_1194098_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX53506.1|1194090_1194732_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AZX53507.1|1194728_1195136_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
AZX53508.1|1195132_1195933_+	SURF1 family protein	NA	NA	NA	NA	NA
AZX53509.1|1196007_1196712_+	oxidoreductase	NA	NA	NA	NA	NA
AZX53510.1|1196743_1197538_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
AZX53511.1|1197534_1198485_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53512.1|1198583_1199534_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53513.1|1199632_1200067_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AZX53514.1|1200149_1202486_+	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
AZX56007.1|1202677_1203694_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 12
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	1303914	1361125	4106930	transposase	Klosneuvirus(16.67%)	50	NA	NA
AZX53592.1|1303914_1304865_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53593.1|1308611_1309223_-	DUF2239 domain-containing protein	NA	NA	NA	NA	NA
AZX53594.1|1309445_1310906_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
AZX53595.1|1311002_1312595_+	GMP synthase (glutamine-hydrolyzing)	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
AZX53596.1|1312581_1312860_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53597.1|1312918_1313206_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZX53598.1|1313207_1314548_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AZX53599.1|1314643_1315333_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53600.1|1315345_1316776_+	MFS transporter	NA	NA	NA	NA	NA
AZX53601.1|1318500_1319322_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53602.1|1319332_1320904_+	amidohydrolase	NA	NA	NA	NA	NA
AZX53603.1|1320932_1321910_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53604.1|1321936_1322740_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
AZX53605.1|1322736_1323531_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX53606.1|1323538_1324774_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZX53607.1|1324766_1325201_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZX53608.1|1325950_1326901_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53609.1|1327522_1329250_-	sodium-independent anion transporter	NA	NA	NA	NA	NA
AZX53610.1|1329361_1330720_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZX53611.1|1330840_1331026_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53612.1|1331012_1331963_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53613.1|1332003_1333074_+	FUSC family protein	NA	NA	NA	NA	NA
AZX56013.1|1333096_1333975_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZX53614.1|1334146_1335118_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX53615.1|1335280_1336123_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53616.1|1336284_1336965_+	anti-sigma factor	NA	NA	NA	NA	NA
AZX53617.1|1336958_1338128_+	amine oxidase	NA	NA	NA	NA	NA
AZX53618.1|1338124_1339156_+	alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
AZX53619.1|1339199_1340441_+	MFS transporter	NA	NA	NA	NA	NA
AZX53620.1|1340475_1342008_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX53621.1|1342088_1342712_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
AZX53622.1|1342742_1343354_+	LysE family translocator	NA	NA	NA	NA	NA
AZX53623.1|1343389_1343860_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
AZX53624.1|1344291_1345296_+	peptidase M20	NA	NA	NA	NA	NA
AZX53625.1|1345332_1346847_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53626.1|1346850_1347810_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX53627.1|1347838_1348642_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX53628.1|1348643_1350278_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
AZX53629.1|1350361_1351423_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZX53630.1|1351621_1351891_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53631.1|1351894_1352419_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
AZX53632.1|1352834_1353785_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53633.1|1353781_1354852_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
AZX53634.1|1354924_1355563_+	DedA family protein	NA	NA	NA	NA	NA
AZX53635.1|1355857_1356085_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX53636.1|1356207_1356921_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX53637.1|1357165_1358116_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53638.1|1358219_1358501_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53639.1|1358615_1360064_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX53640.1|1360174_1361125_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	1416619	1473025	4106930	transposase	Enterococcus_phage(16.67%)	50	NA	NA
AZX53693.1|1416619_1417570_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53694.1|1417668_1418619_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53695.1|1418621_1419575_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX53696.1|1419578_1420454_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	37.6	2.2e-33
AZX53697.1|1420459_1421488_-	dehydrogenase	NA	NA	NA	NA	NA
AZX53698.1|1421484_1422528_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53699.1|1422595_1423621_-	dipeptidase	NA	NA	NA	NA	NA
AZX53700.1|1423902_1425156_+	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA	NA
AZX53701.1|1425166_1425439_+	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
AZX53702.1|1425435_1428375_+	sarcosine oxidase subunit alpha family protein	NA	NA	NA	NA	NA
AZX53703.1|1428382_1428982_+	sarcosine oxidase subunit gamma	NA	NA	NA	NA	NA
AZX53704.1|1428982_1429831_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AZX53705.1|1429868_1430855_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX53706.1|1430870_1432307_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX53707.1|1432319_1433111_+	hydrolase	NA	NA	NA	NA	NA
AZX53708.1|1433423_1434485_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
AZX53709.1|1434521_1435331_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
AZX53710.1|1435331_1435880_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
AZX56018.1|1436030_1436450_+	transcriptional repressor	NA	NA	NA	NA	NA
AZX53711.1|1436524_1438186_-	DNA repair protein RecN	NA	NA	NA	NA	NA
AZX53712.1|1438201_1439101_-	NAD kinase	NA	NA	NA	NA	NA
AZX53713.1|1439215_1440220_+	HrcA family transcriptional regulator	NA	NA	NA	NA	NA
AZX53714.1|1440277_1441366_+	ferrochelatase	NA	NA	NA	NA	NA
AZX56019.1|1441447_1441690_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53715.1|1441831_1442386_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AZX53716.1|1442393_1442774_+	thioredoxin	NA	NA	NA	NA	NA
AZX53717.1|1442864_1444790_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	50.3	1.1e-146
AZX53718.1|1444890_1446024_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	60.8	3.9e-19
AZX53719.1|1446192_1448943_-	insulinase family protein	NA	A0A2K9LA15	Tupanvirus	28.1	1.5e-19
AZX53720.1|1449275_1449650_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53721.1|1449687_1450230_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX53722.1|1450233_1451406_-	VWA domain-containing protein	NA	NA	NA	NA	NA
AZX56020.1|1451427_1452315_-	MoxR family ATPase	NA	NA	NA	NA	NA
AZX53723.1|1452407_1453358_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53724.1|1453524_1453878_+	cytochrome C	NA	NA	NA	NA	NA
AZX53725.1|1453890_1454253_+	cytochrome	NA	NA	NA	NA	NA
AZX53726.1|1454294_1454720_-	DUF1841 domain-containing protein	NA	NA	NA	NA	NA
AZX53727.1|1454922_1456179_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
AZX53728.1|1456377_1457358_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53729.1|1457507_1458749_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53730.1|1458847_1459798_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53731.1|1459806_1460502_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
AZX53732.1|1463323_1463923_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
AZX53733.1|1463933_1466099_-	K(+)-transporting ATPase subunit B	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
AZX53734.1|1466122_1467907_-	potassium-transporting ATPase A chain	NA	NA	NA	NA	NA
AZX53735.1|1467906_1467996_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
AZX53736.1|1468690_1468963_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
AZX53737.1|1468962_1471029_+	cation acetate symporter	NA	NA	NA	NA	NA
AZX53738.1|1471025_1471976_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53739.1|1472074_1473025_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	1498824	1551193	4106930	transposase,tRNA,protease	Planktothrix_phage(15.38%)	55	NA	NA
AZX53763.1|1498824_1499775_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53764.1|1499801_1500575_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AZX53765.1|1500586_1501828_+	MFS transporter	NA	NA	NA	NA	NA
AZX53766.1|1503609_1504560_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53767.1|1504591_1505689_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
AZX53768.1|1505685_1506636_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53769.1|1507057_1507450_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53770.1|1507455_1508232_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX53771.1|1508619_1510569_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
AZX53772.1|1510589_1511135_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
AZX53773.1|1511271_1512228_+	glutathione synthetase	NA	NA	NA	NA	NA
AZX53774.1|1512238_1512637_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
AZX53775.1|1512752_1513022_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
AZX53776.1|1513143_1514838_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
AZX53777.1|1515002_1515227_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53778.1|1515825_1516776_+	ornithine cyclodeaminase	NA	NA	NA	NA	NA
AZX53779.1|1516817_1517978_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53780.1|1518138_1519059_+	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
AZX53781.1|1519071_1519713_+	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
AZX53782.1|1519709_1520381_+	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
AZX53783.1|1520377_1521148_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
AZX53784.1|1521246_1522197_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53785.1|1522413_1522818_-	GFA family protein	NA	NA	NA	NA	NA
AZX53786.1|1522891_1524082_-	formate dehydrogenase	NA	NA	NA	NA	NA
AZX53787.1|1524115_1524442_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
AZX53788.1|1524464_1524980_-	transporter	NA	NA	NA	NA	NA
AZX53789.1|1525038_1526265_-	acetamidase/formamidase family protein	NA	A0A1V0S8X7	Catovirus	58.8	5.2e-134
AZX53790.1|1526442_1527573_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZX53791.1|1527807_1528389_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
AZX53792.1|1528525_1529590_+	fructose-bisphosphate aldolase class II	NA	NA	NA	NA	NA
AZX53793.1|1529674_1530121_-	GFA family protein	NA	NA	NA	NA	NA
AZX53794.1|1530345_1531227_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	36.1	1.8e-51
AZX53795.1|1531281_1531533_+	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA	NA
AZX53796.1|1531535_1531937_+	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA	NA
AZX53797.1|1531956_1532193_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53798.1|1532200_1532680_+	disulfide bond formation protein B	NA	NA	NA	NA	NA
AZX53799.1|1532865_1533345_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.5	6.5e-16
AZX53800.1|1533347_1534538_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AZX53801.1|1534542_1535595_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	37.8	4.8e-35
AZX53802.1|1535731_1536754_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	40.7	1.6e-67
AZX53803.1|1536845_1537682_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53804.1|1537874_1538780_+	agmatinase	NA	NA	NA	NA	NA
AZX53805.1|1538806_1539598_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53806.1|1539620_1540313_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX53807.1|1540334_1541087_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	2.8e-29
AZX53808.1|1541215_1542775_+	acetolactate synthase large subunit	NA	NA	NA	NA	NA
AZX53809.1|1542806_1543352_+	acyl dehydratase	NA	NA	NA	NA	NA
AZX53810.1|1543489_1544746_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX53811.1|1544762_1546457_-	thiamine pyrophosphate-binding protein	NA	E5ERI2	Ostreococcus_lucimarinus_virus	24.5	3.8e-26
AZX53812.1|1546614_1547502_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	28.7	3.4e-18
AZX53813.1|1547539_1548472_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	29.5	2.3e-25
AZX56022.1|1548485_1548974_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
AZX53814.1|1549091_1549670_+|protease	protease	protease	NA	NA	NA	NA
AZX53815.1|1549742_1550144_+	aryl-sulfate sulfotransferase	NA	NA	NA	NA	NA
AZX53816.1|1550242_1551193_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	1606396	1677550	4106930	transposase	Ectocarpus_siliculosus_virus(10.0%)	54	NA	NA
AZX53863.1|1606396_1607347_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53864.1|1607368_1608589_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
AZX53865.1|1608774_1610187_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AZX53866.1|1610250_1611318_+	PAS domain-containing sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
AZX53867.1|1611314_1612805_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
AZX56025.1|1612814_1613759_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53868.1|1613918_1614617_+	pirin family protein	NA	NA	NA	NA	NA
AZX53869.1|1614694_1615600_+	pirin family protein	NA	NA	NA	NA	NA
AZX53870.1|1615619_1616570_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53871.1|1616668_1617463_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
AZX53872.1|1617467_1619138_-	iron ABC transporter permease	NA	NA	NA	NA	NA
AZX53873.1|1619261_1620311_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53874.1|1620632_1621409_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
AZX53875.1|1621473_1622376_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53876.1|1623669_1624473_+	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
AZX53877.1|1627166_1627553_+	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
AZX53878.1|1627568_1629659_+	DNA helicase RecG	NA	NA	NA	NA	NA
AZX53879.1|1629710_1630664_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
AZX56026.1|1630678_1631566_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53880.1|1631703_1633230_+	methylmalonate-semialdehyde dehydrogenase (CoA acylating)	NA	NA	NA	NA	NA
AZX56027.1|1633328_1633829_+	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
AZX53881.1|1634152_1636108_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
AZX53882.1|1636275_1638360_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53883.1|1638386_1639172_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
AZX53884.1|1640027_1640798_+	polyhydroxyalkanoate biosynthesis repressor PhaR	NA	NA	NA	NA	NA
AZX53885.1|1640797_1641538_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX53886.1|1641579_1642749_+	capsule biosynthesis protein	NA	NA	NA	NA	NA
AZX53887.1|1642780_1644865_+	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA	NA
AZX53888.1|1644861_1645752_+	capsular biosynthesis protein	NA	NA	NA	NA	NA
AZX53889.1|1645748_1646846_+	capsular polysaccharide export protein	NA	NA	NA	NA	NA
AZX53890.1|1646868_1648158_+	nucleotide sugar dehydrogenase	NA	NA	NA	NA	NA
AZX53891.1|1648169_1649195_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
AZX53892.1|1649191_1651249_+	capsular polysaccharide export protein	NA	NA	NA	NA	NA
AZX53893.1|1651262_1652438_+	capsule biosynthesis protein CapA	NA	NA	NA	NA	NA
AZX53894.1|1652519_1653470_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53895.1|1653528_1654302_+	oxidoreductase	NA	NA	NA	NA	NA
AZX53896.1|1654294_1655851_+	LTA synthase family protein	NA	NA	NA	NA	NA
AZX53897.1|1655847_1656798_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53898.1|1658124_1658727_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53899.1|1658966_1659668_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX53900.1|1659661_1660444_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
AZX53901.1|1660628_1661579_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53902.1|1661677_1662415_-	hypothetical protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
AZX53903.1|1662604_1663363_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX53904.1|1663409_1664399_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX53905.1|1664576_1665545_-	transporter	NA	NA	NA	NA	NA
AZX53906.1|1667084_1668053_+	AAA family ATPase	NA	NA	NA	NA	NA
AZX53907.1|1668061_1669003_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AZX53908.1|1669476_1670487_+	hypothetical protein	NA	NA	NA	NA	NA
AZX56028.1|1670477_1671992_+	VWA domain-containing protein	NA	NA	NA	NA	NA
AZX53909.1|1671988_1673335_+	hypothetical protein	NA	NA	NA	NA	NA
AZX56029.1|1673337_1674372_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
AZX53910.1|1674421_1676047_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
AZX53911.1|1676599_1677550_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	1698341	1759689	4106930	transposase,tRNA	uncultured_Caudovirales_phage(12.5%)	52	NA	NA
AZX53925.1|1698341_1699292_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX56035.1|1699585_1700308_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
AZX53926.1|1700746_1701934_-	MFS transporter	NA	NA	NA	NA	NA
AZX53927.1|1701937_1702318_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53928.1|1704037_1705009_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX53929.1|1705022_1705736_+	NAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX53930.1|1705740_1706658_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53931.1|1706764_1707061_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53932.1|1707159_1708110_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53933.1|1709268_1712202_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
AZX53934.1|1712201_1712546_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
AZX53935.1|1712542_1714171_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
AZX53936.1|1714167_1714647_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
AZX53937.1|1714643_1714928_+	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
AZX53938.1|1714924_1715251_+	cation:proton antiporter	NA	NA	NA	NA	NA
AZX53939.1|1715406_1716357_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53940.1|1716400_1716943_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53941.1|1717040_1717889_+	hydrolase	NA	NA	NA	NA	NA
AZX53942.1|1717881_1718388_+|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
AZX53943.1|1718384_1719386_+	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
AZX53944.1|1719398_1720193_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX53945.1|1720241_1722143_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZX53946.1|1722139_1722763_-	hypothetical protein	NA	NA	NA	NA	NA
AZX53947.1|1722889_1724014_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53948.1|1724331_1725999_+	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.6e-53
AZX53949.1|1726154_1726931_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
AZX53950.1|1727015_1728014_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53951.1|1728010_1728784_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX53952.1|1729768_1730719_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53953.1|1730742_1731207_-	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
AZX53954.1|1731353_1732562_+	flavohemoprotein	NA	NA	NA	NA	NA
AZX53955.1|1732572_1733043_+	DNA-binding protein	NA	NA	NA	NA	NA
AZX53956.1|1733161_1734451_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
AZX53957.1|1737191_1738142_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX53958.1|1738240_1739257_-	folate-binding protein	NA	NA	NA	NA	NA
AZX53959.1|1739423_1740470_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
AZX53960.1|1740466_1741093_+	thymidylate kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
AZX53961.1|1741089_1742142_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
AZX53962.1|1742191_1742962_+	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
AZX53963.1|1743012_1743849_+	hypothetical protein	NA	NA	NA	NA	NA
AZX53964.1|1744044_1744785_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53965.1|1744859_1745603_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53966.1|1746264_1747038_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
AZX53967.1|1748175_1749465_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
AZX53968.1|1751075_1752323_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
AZX53969.1|1752332_1754042_-	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
AZX53970.1|1754038_1754977_-	CoA ester lyase	NA	NA	NA	NA	NA
AZX53971.1|1754973_1756257_-	TRAP transporter large permease	NA	NA	NA	NA	NA
AZX53972.1|1756260_1756743_-	TRAP transporter small permease	NA	NA	NA	NA	NA
AZX53973.1|1756743_1757730_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX53974.1|1757902_1758622_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX53975.1|1758738_1759689_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	1940874	2010526	4106930	transposase,tRNA	Staphylococcus_phage(16.67%)	57	NA	NA
AZX54107.1|1940874_1943532_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
AZX54108.1|1943609_1944812_-	MFS transporter	NA	NA	NA	NA	NA
AZX54109.1|1944808_1945321_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX56044.1|1945443_1945782_-	DNA-binding protein	NA	NA	NA	NA	NA
AZX54110.1|1946157_1947108_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54111.1|1947206_1948157_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54112.1|1948320_1950216_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
AZX54113.1|1950329_1950497_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
AZX54114.1|1950560_1950797_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
AZX54115.1|1951165_1952365_-	Bcr/CflA family drug resistance efflux transporter	NA	NA	NA	NA	NA
AZX54116.1|1953880_1954831_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54117.1|1955282_1956284_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX54118.1|1956456_1957314_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX54119.1|1957310_1958573_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
AZX54120.1|1958673_1959048_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
AZX54121.1|1959096_1960308_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZX54122.1|1960392_1961163_+	spermidine synthase	NA	NA	NA	NA	NA
AZX54123.1|1961276_1962041_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX56045.1|1962156_1963293_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
AZX54124.1|1963289_1964096_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX54125.1|1965840_1966812_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX54126.1|1966968_1967481_+	superoxide dismutase [Cu-Zn] SodC1	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
AZX54127.1|1967639_1968614_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX54128.1|1969614_1970409_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
AZX56046.1|1970434_1971241_-	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA	NA
AZX54129.1|1971351_1971942_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AZX54130.1|1971952_1973131_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54131.1|1973233_1973608_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX54132.1|1973860_1975192_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZX54133.1|1975258_1978489_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZX54134.1|1979979_1980726_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AZX54135.1|1980810_1981272_+	holo-ACP synthase	NA	NA	NA	NA	NA
AZX54136.1|1981309_1982368_+	beta-hexosaminidase	NA	NA	NA	NA	NA
AZX54137.1|1982330_1984160_+	UvrABC system protein C	NA	NA	NA	NA	NA
AZX54138.1|1984199_1984772_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
AZX54139.1|1986196_1987108_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	5.9e-42
AZX54140.1|1987336_1988659_+	isocitrate lyase	NA	NA	NA	NA	NA
AZX54141.1|1988704_1989088_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54142.1|1989018_1989654_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54143.1|1989613_1990564_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54144.1|1991434_1992307_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX54145.1|1992384_1993524_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX54146.1|1993873_1995139_+	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA	NA
AZX54147.1|1995144_1995672_+	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
AZX54148.1|1995676_1996495_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX54149.1|1996494_1997217_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX54150.1|1997238_1997553_+	ferredoxin	NA	NA	NA	NA	NA
AZX54151.1|1997549_1998719_+	CoA transferase	NA	NA	NA	NA	NA
AZX54152.1|1998749_1999625_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX54153.1|1999621_2000941_-	phenylacetate--CoA ligase family protein	NA	NA	NA	NA	NA
AZX54154.1|2001013_2002210_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
AZX54155.1|2002220_2003708_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54156.1|2006302_2007202_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54157.1|2007339_2008305_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX54158.1|2008403_2009354_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54159.1|2009397_2009589_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54160.1|2009575_2010526_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	2022022	2071970	4106930	transposase	Salmonella_phage(14.29%)	47	NA	NA
AZX54172.1|2022022_2022973_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54173.1|2022959_2023148_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54174.1|2023167_2023617_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
AZX54175.1|2023613_2024564_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54176.1|2024662_2024959_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54177.1|2025133_2026486_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
AZX56048.1|2026628_2027645_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX56049.1|2029624_2030638_-	flavin-nucleotide-binding protein	NA	NA	NA	NA	NA
AZX54178.1|2030724_2031630_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54179.1|2031786_2032131_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54180.1|2032288_2032747_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
AZX54181.1|2032760_2034977_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
AZX54182.1|2034973_2036035_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54183.1|2036063_2037038_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX54184.1|2036989_2037808_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
AZX54185.1|2037820_2038429_-	peptidase S16	NA	NA	NA	NA	NA
AZX54186.1|2038603_2038999_+	VOC family protein	NA	NA	NA	NA	NA
AZX54187.1|2039017_2040457_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
AZX54188.1|2040485_2040833_+	GFA family protein	NA	NA	NA	NA	NA
AZX54189.1|2040851_2041802_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54190.1|2042454_2043405_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54191.1|2043488_2045306_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
AZX54192.1|2045379_2046027_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54193.1|2046039_2046969_-	ZIP family metal transporter	NA	NA	NA	NA	NA
AZX54194.1|2047138_2047603_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54195.1|2047850_2048531_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54196.1|2048579_2050271_+	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
AZX54197.1|2050286_2050838_-	ATPase	NA	NA	NA	NA	NA
AZX54198.1|2050834_2051206_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX54199.1|2051318_2052155_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX54200.1|2052165_2052690_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
AZX54201.1|2052787_2052967_+	DUF3008 domain-containing protein	NA	NA	NA	NA	NA
AZX54202.1|2053096_2054128_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX54203.1|2054201_2054558_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
AZX56050.1|2054547_2055423_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AZX54204.1|2055521_2056406_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54205.1|2056427_2057723_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
AZX54206.1|2058671_2059322_+	flavodoxin family protein	NA	NA	NA	NA	NA
AZX56051.1|2059409_2060930_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AZX54207.1|2061187_2063053_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZX54208.1|2064098_2065049_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54209.1|2066021_2066381_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
AZX54210.1|2066368_2067805_-	dethiobiotin synthase	NA	NA	NA	NA	NA
AZX54211.1|2067801_2068455_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX54212.1|2068451_2069651_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
AZX54213.1|2069748_2071023_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
AZX54214.1|2071019_2071970_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	2083174	2123865	4106930	transposase,tRNA,protease	Klosneuvirus(25.0%)	36	NA	NA
AZX54228.1|2083174_2084125_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54229.1|2084223_2085174_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54230.1|2085133_2085547_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
AZX54231.1|2085831_2086131_+	hypothetical protein	NA	NA	NA	NA	NA
AZX56053.1|2086540_2088709_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.1e-36
AZX54232.1|2089508_2091539_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
AZX54233.1|2091558_2091771_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AZX54234.1|2092048_2092588_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
AZX54235.1|2092701_2094009_-	adenylosuccinate synthetase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
AZX54236.1|2094073_2095231_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
AZX54237.1|2095414_2096314_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
AZX54238.1|2096332_2097637_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AZX54239.1|2097602_2098709_-	GTPase HflX	NA	NA	NA	NA	NA
AZX54240.1|2098796_2099033_-	RNA-binding protein Hfq	NA	NA	NA	NA	NA
AZX54241.1|2099171_2100242_-	histidinol-phosphate aminotransferase 1	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
AZX54242.1|2100245_2101601_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
AZX54243.1|2101627_2102788_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
AZX54244.1|2102790_2103429_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54245.1|2103430_2104735_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
AZX54246.1|2104775_2106071_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA	NA
AZX54247.1|2106077_2106584_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX54248.1|2106580_2107729_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
AZX54249.1|2107756_2108182_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
AZX54250.1|2108504_2111387_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
AZX54251.1|2111479_2112235_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
AZX54252.1|2113000_2114350_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AZX54253.1|2114448_2115399_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54254.1|2115497_2116448_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54255.1|2116521_2116995_+	RidA family protein	NA	NA	NA	NA	NA
AZX54256.1|2117020_2118229_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
AZX54257.1|2118225_2118999_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AZX54258.1|2118998_2119622_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AZX54259.1|2119787_2120048_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
AZX54260.1|2120351_2120933_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54261.1|2120999_2121254_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
AZX54262.1|2121240_2123865_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
>prophage 20
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	2151648	2206884	4106930	transposase,protease	Lake_Baikal_phage(25.0%)	50	NA	NA
AZX54282.1|2151648_2152599_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54283.1|2152799_2153609_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX54284.1|2153733_2154684_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54285.1|2154680_2155574_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AZX54286.1|2155698_2155893_-	Fe-S assembly protein IscX	NA	NA	NA	NA	NA
AZX54287.1|2155892_2156234_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
AZX54288.1|2156243_2158106_-	chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
AZX54289.1|2158235_2158748_-	co-chaperone protein HscB	NA	NA	NA	NA	NA
AZX54290.1|2158750_2159074_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
AZX54291.1|2159075_2159486_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
AZX54292.1|2159523_2160735_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
AZX54293.1|2160752_2161265_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
AZX54294.1|2161480_2161972_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
AZX54295.1|2162224_2164261_-	UvrABC system protein B	NA	NA	NA	NA	NA
AZX54296.1|2164338_2165541_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AZX54297.1|2165591_2166320_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	2.8e-10
AZX54298.1|2167877_2168828_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54299.1|2169398_2169611_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54300.1|2169628_2170360_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54301.1|2170394_2171036_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AZX54302.1|2171028_2171745_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZX54303.1|2173909_2174686_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZX54304.1|2174707_2175865_-	thiolase	NA	NA	NA	NA	NA
AZX54305.1|2175861_2176293_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54306.1|2176289_2177093_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX54307.1|2177106_2177562_-	MaoC family dehydratase	NA	NA	NA	NA	NA
AZX54308.1|2177574_2178546_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX54309.1|2178611_2179835_-	CoA transferase	NA	NA	NA	NA	NA
AZX54310.1|2180062_2181013_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54311.1|2181136_2183590_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
AZX54312.1|2183778_2185083_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
AZX54313.1|2185187_2185841_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
AZX54314.1|2185843_2187154_-	trigger factor	NA	NA	NA	NA	NA
AZX54315.1|2187332_2187911_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
AZX54316.1|2188022_2188223_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
AZX54317.1|2188568_2189135_-	DUF924 domain-containing protein	NA	NA	NA	NA	NA
AZX54318.1|2189218_2189422_-	cold-shock protein CspA	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
AZX54319.1|2189728_2190049_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54320.1|2190090_2190372_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54321.1|2190446_2191703_-	autotransporter Phg	NA	NA	NA	NA	NA
AZX54322.1|2192085_2192415_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX54323.1|2193985_2194807_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AZX54324.1|2194806_2195946_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AZX54325.1|2195952_2196849_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AZX54326.1|2196845_2198771_+	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
AZX54327.1|2199130_2201743_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZX54328.1|2201795_2204096_-	DNA helicase II	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
AZX54329.1|2204092_2205301_-	acyl-CoA desaturase	NA	NA	NA	NA	NA
AZX54330.1|2205562_2205937_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54331.1|2205933_2206884_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	2509794	2568038	4106930	transposase,tRNA	Planktothrix_phage(28.57%)	53	NA	NA
AZX54582.1|2509794_2510745_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54583.1|2511224_2511881_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
AZX54584.1|2511895_2513563_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZX54585.1|2513565_2514195_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX54586.1|2514406_2515501_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX54587.1|2515645_2516458_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AZX54588.1|2516461_2518165_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA	NA
AZX54589.1|2518215_2519346_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZX54590.1|2519532_2520609_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
AZX56070.1|2520690_2521341_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
AZX54591.1|2521355_2522789_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
AZX54592.1|2523042_2523861_-	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX54593.1|2523857_2524562_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
AZX54594.1|2525461_2526577_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54595.1|2526610_2526985_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54596.1|2527007_2528165_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
AZX54597.1|2528177_2528411_-	lipoprotein	NA	NA	NA	NA	NA
AZX54598.1|2529045_2532015_-	formate dehydrogenase	NA	NA	NA	NA	NA
AZX54599.1|2532029_2532239_-	formate dehydrogenase	NA	NA	NA	NA	NA
AZX54600.1|2532390_2533020_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54601.1|2533016_2535134_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
AZX54602.1|2535130_2535811_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
AZX54603.1|2535807_2536368_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
AZX54604.1|2536374_2537472_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AZX54605.1|2537609_2538218_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
AZX54606.1|2538214_2539507_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZX54607.1|2539520_2540063_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
AZX54608.1|2540072_2540909_-	M48 family peptidase	NA	NA	NA	NA	NA
AZX54609.1|2540942_2542004_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
AZX54610.1|2542045_2543098_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZX54611.1|2543113_2543416_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54612.1|2543557_2544508_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54613.1|2544686_2546381_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AZX54614.1|2546377_2547463_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
AZX54615.1|2547510_2548410_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54616.1|2548420_2549065_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
AZX54617.1|2550086_2553329_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
AZX54618.1|2553339_2554437_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	5.3e-53
AZX54619.1|2554699_2555683_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	5.9e-11
AZX54620.1|2555781_2556732_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54621.1|2556830_2557781_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54622.1|2557790_2558480_-	VIT family protein	NA	NA	NA	NA	NA
AZX54623.1|2558539_2558977_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX54624.1|2559022_2559916_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX54625.1|2559963_2561136_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX54626.1|2561132_2562287_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX54627.1|2562483_2562834_-	RnfH family protein	NA	NA	NA	NA	NA
AZX54628.1|2562823_2563258_-	ubiquinone-binding protein	NA	NA	NA	NA	NA
AZX54629.1|2563274_2564225_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54630.1|2564372_2564840_+	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
AZX54631.1|2564820_2565978_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
AZX54632.1|2566043_2566970_-	paraslipin	NA	NA	NA	NA	NA
AZX54633.1|2567087_2568038_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	2610318	2676818	4106930	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
AZX54672.1|2610318_2611269_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54673.1|2611638_2612211_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
AZX54674.1|2612213_2613224_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
AZX54675.1|2613216_2613717_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
AZX54676.1|2613727_2614069_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
AZX54677.1|2614080_2614872_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA	NA
AZX54678.1|2614888_2615158_+	flagellar biosynthetic protein FliQ	NA	NA	NA	NA	NA
AZX54679.1|2615180_2615969_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
AZX56074.1|2616015_2617032_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX54680.1|2617248_2618691_-	PAS domain S-box protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
AZX54681.1|2618869_2620489_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
AZX54682.1|2620609_2622430_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
AZX54683.1|2622508_2624041_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
AZX54684.1|2624074_2625721_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
AZX54685.1|2625790_2626813_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
AZX54686.1|2626830_2627964_-	flagellar biosynthesis protein FlgI	NA	NA	NA	NA	NA
AZX54687.1|2627966_2628656_-	flagellar L-ring protein	NA	NA	NA	NA	NA
AZX54688.1|2628655_2629441_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
AZX54689.1|2629484_2630249_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
AZX54690.1|2630287_2631709_-	flagellar hook protein FlgE	NA	NA	NA	NA	NA
AZX54691.1|2631774_2632479_-	flagellar basal body rod modification protein	NA	NA	NA	NA	NA
AZX54692.1|2632526_2632946_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
AZX54693.1|2632958_2633366_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
AZX56075.1|2633549_2634260_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
AZX54694.1|2634386_2634677_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
AZX54695.1|2634694_2635177_+	flagellar protein FlgN	NA	NA	NA	NA	NA
AZX54696.1|2639682_2640837_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
AZX56076.1|2641142_2642159_+|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX54697.1|2642405_2643194_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX54698.1|2643260_2643941_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX54699.1|2643937_2644708_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
AZX54700.1|2644806_2645757_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54701.1|2645812_2646730_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
AZX54702.1|2646740_2647919_-	mandelate racemase	NA	NA	NA	NA	NA
AZX54703.1|2647938_2648934_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX54704.1|2650522_2651131_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
AZX54705.1|2651118_2652159_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZX54706.1|2652176_2653139_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX54707.1|2653135_2654329_-	CoA transferase	NA	NA	NA	NA	NA
AZX54708.1|2654325_2655123_-	citryl-CoA lyase	NA	NA	NA	NA	NA
AZX54709.1|2655148_2656135_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX54710.1|2656153_2658193_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
AZX56077.1|2658394_2659075_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54711.1|2659088_2660000_-	CoA ester lyase	NA	NA	NA	NA	NA
AZX54712.1|2659996_2660575_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX54713.1|2660713_2661619_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54714.1|2661626_2665046_+	nuclease	NA	NA	NA	NA	NA
AZX54715.1|2665033_2667634_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
AZX54716.1|2668589_2669222_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54717.1|2669615_2670374_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54718.1|2670370_2671573_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
AZX54719.1|2671760_2672711_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54720.1|2673618_2674764_+	DUF3182 domain-containing protein	NA	NA	NA	NA	NA
AZX56078.1|2674783_2675506_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX54721.1|2675622_2675802_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54722.1|2675867_2676818_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	2879881	2961158	4106930	transposase,tRNA	Planktothrix_phage(16.67%)	59	NA	NA
AZX54885.1|2879881_2880832_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54886.1|2880828_2881731_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54887.1|2881818_2882577_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX54888.1|2882589_2883738_-	cell division protein ZapE	NA	NA	NA	NA	NA
AZX54889.1|2883778_2885206_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
AZX54890.1|2885435_2886650_-	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
AZX54891.1|2886695_2889566_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
AZX54892.1|2891976_2892465_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX54893.1|2892590_2895287_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
AZX54894.1|2895441_2897724_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
AZX54895.1|2897888_2898521_+	fimbrial protein	NA	NA	NA	NA	NA
AZX54896.1|2898619_2899570_+|transposase	IS481 family transposase IS481v2	transposase	NA	NA	NA	NA
AZX54897.1|2899616_2900171_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
AZX54898.1|2900238_2901084_-	PHP domain-containing protein	NA	NA	NA	NA	NA
AZX54899.1|2901153_2902122_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX54900.1|2902121_2903918_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54901.1|2905817_2909744_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZX54902.1|2910034_2910211_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54903.1|2910479_2913710_-	autotransporter SphB3	NA	NA	NA	NA	NA
AZX54904.1|2913991_2914819_-	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
AZX54905.1|2914852_2915548_-	lipoprotein-releasing system ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
AZX54906.1|2915540_2916821_-	lipoprotein-releasing system transmembrane subunit LolC	NA	NA	NA	NA	NA
AZX54907.1|2916830_2917808_+	hypothetical protein	NA	NA	NA	NA	NA
AZX56094.1|2917789_2919490_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
AZX54908.1|2919592_2920696_+	peptide chain release factor 2	NA	NA	NA	NA	NA
AZX54909.1|2920726_2921482_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX54910.1|2921488_2923009_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
AZX54911.1|2923051_2923354_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54912.1|2923350_2923983_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54913.1|2924061_2925927_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
AZX54914.1|2925923_2926739_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
AZX54915.1|2926746_2927862_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX54916.1|2928766_2929645_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX54917.1|2929644_2930469_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
AZX54918.1|2930636_2931587_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54919.1|2931769_2934649_+	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AZX54920.1|2934630_2935407_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX54921.1|2935499_2936963_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
AZX54922.1|2936959_2937331_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
AZX54923.1|2937348_2938662_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54924.1|2938698_2939157_+	CBS domain-containing protein	NA	NA	NA	NA	NA
AZX54925.1|2939269_2940220_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54926.1|2940216_2941230_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AZX54927.1|2941369_2942356_+	homoserine kinase	NA	NA	NA	NA	NA
AZX54928.1|2942399_2943200_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54929.1|2944002_2944953_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54930.1|2945104_2945707_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54931.1|2945725_2946358_+	ribosomal RNA large subunit methyltransferase E	NA	NA	NA	NA	NA
AZX54932.1|2946595_2948482_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
AZX54933.1|2948500_2949343_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
AZX54934.1|2949339_2950698_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AZX54935.1|2950918_2951713_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX54936.1|2951943_2953437_-	exopolyphosphatase	NA	NA	NA	NA	NA
AZX54937.1|2953672_2955754_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
AZX54938.1|2955948_2956989_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
AZX54939.1|2957123_2958140_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AZX54940.1|2958161_2959019_+	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AZX56095.1|2959063_2959840_+	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
AZX54941.1|2960207_2961158_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	2970226	3019149	4106930	transposase,tRNA,holin	uncultured_Mediterranean_phage(37.5%)	45	NA	NA
AZX54949.1|2970226_2970640_-|holin	phage holin family protein	holin	NA	NA	NA	NA
AZX54950.1|2970680_2970998_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
AZX54951.1|2971082_2971799_-	hypothetical protein	NA	NA	NA	NA	NA
AZX56096.1|2972062_2973484_+	siroheme synthase	NA	NA	NA	NA	NA
AZX54952.1|2973550_2976283_-	pertactin autotransporter	NA	NA	NA	NA	NA
AZX56097.1|2976615_2977632_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX56098.1|2977967_2978609_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AZX54953.1|2978699_2980136_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AZX54954.1|2980293_2981367_+|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AZX54955.1|2981363_2982500_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
AZX54956.1|2982644_2982989_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
AZX54957.1|2983055_2984936_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
AZX54958.1|2984985_2985921_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
AZX56099.1|2986253_2987270_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX54959.1|2988207_2989635_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AZX54960.1|2989631_2990654_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
AZX54961.1|2990643_2991117_+	endoribonuclease YbeY	NA	NA	NA	NA	NA
AZX54962.1|2991242_2992145_+	magnesium/cobalt efflux protein	NA	NA	NA	NA	NA
AZX54963.1|2992141_2993785_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
AZX56100.1|2993781_2994789_-	aldo/keto reductase	NA	NA	NA	NA	NA
AZX56101.1|2995619_2996636_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX54964.1|2996735_2997368_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
AZX54965.1|2997376_2997766_-	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
AZX54966.1|2997818_2998871_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AZX54967.1|2999734_3001441_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
AZX54968.1|3001514_3002015_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
AZX54969.1|3002029_3004087_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
AZX54970.1|3004113_3004407_-	response regulator	NA	NA	NA	NA	NA
AZX54971.1|3004508_3005456_-	motility protein MotB	NA	NA	NA	NA	NA
AZX54972.1|3005468_3006344_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
AZX54973.1|3006464_3007025_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
AZX54974.1|3007059_3007383_-	flagellar transcriptional activator FlhD	NA	NA	NA	NA	NA
AZX54975.1|3007818_3008556_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
AZX54976.1|3008854_3009805_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54977.1|3010048_3010312_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
AZX54978.1|3010385_3010667_+	hypothetical protein	NA	NA	NA	NA	NA
AZX54979.1|3010683_3011544_-	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
AZX54980.1|3011540_3011876_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54981.1|3011929_3012580_-	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
AZX54982.1|3014260_3015205_-	hypothetical protein	NA	NA	NA	NA	NA
AZX54983.1|3015250_3015568_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX54984.1|3015570_3016509_-	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
AZX54985.1|3016686_3017172_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX54986.1|3017190_3017739_+	damage-inducible protein DinB	NA	NA	NA	NA	NA
AZX54987.1|3018015_3019149_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	3030756	3103250	4106930	transposase	Bacillus_virus(16.67%)	59	NA	NA
AZX54996.1|3030756_3031707_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX54997.1|3031749_3032925_+	flagellin FliC	NA	NA	NA	NA	NA
AZX54998.1|3033146_3034937_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
AZX54999.1|3034949_3036611_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
AZX55000.1|3036623_3039329_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AZX55001.1|3039621_3041376_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
AZX55002.1|3041372_3041999_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX55003.1|3041995_3042847_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
AZX55004.1|3042922_3045037_+	M3 family peptidase	NA	NA	NA	NA	NA
AZX55005.1|3045187_3045838_+	SCO family protein	NA	NA	NA	NA	NA
AZX55006.1|3045983_3046235_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AZX55007.1|3046304_3047687_-	multidrug transporter	NA	NA	NA	NA	NA
AZX55008.1|3047683_3050863_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZX56103.1|3051670_3052588_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55009.1|3052639_3053371_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AZX55010.1|3053430_3054003_+	chorismate--pyruvate lyase	NA	NA	NA	NA	NA
AZX56104.1|3055511_3056528_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX55011.1|3056665_3057715_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
AZX55012.1|3057819_3058770_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55013.1|3058865_3059591_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
AZX55014.1|3059801_3060182_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
AZX55015.1|3060487_3061360_+	multidrug DMT transporter permease	NA	NA	NA	NA	NA
AZX55016.1|3061367_3061748_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55017.1|3061901_3063176_-	radical SAM protein	NA	NA	NA	NA	NA
AZX56105.1|3064663_3065572_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
AZX55018.1|3066369_3067434_-	sulfate/thiosulfate import ATP-binding protein CysA	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
AZX55019.1|3069270_3070305_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX55020.1|3070494_3071136_-	peroxiredoxin	NA	NA	NA	NA	NA
AZX55021.1|3071218_3073045_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX55022.1|3073288_3074218_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
AZX55023.1|3074217_3074967_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
AZX55024.1|3075038_3075953_-	deacetylase	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
AZX55025.1|3075972_3077118_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
AZX55026.1|3077178_3078090_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
AZX55027.1|3078170_3079121_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55028.1|3079219_3079804_-	DUF655 domain-containing protein	NA	NA	NA	NA	NA
AZX55029.1|3079838_3080828_-	ADP-L-glycero-D-mannoheptose-6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
AZX55030.1|3080824_3081766_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
AZX55031.1|3081762_3082983_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
AZX55032.1|3083025_3083340_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
AZX55033.1|3083531_3083891_-	integration host factor subunit beta	NA	NA	NA	NA	NA
AZX55034.1|3083892_3085623_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
AZX55035.1|3085795_3086467_-	cytidylate kinase	NA	NA	NA	NA	NA
AZX55036.1|3086481_3087810_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AZX55037.1|3087806_3088706_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
AZX55038.1|3088792_3089878_-	prephenate dehydratase	NA	NA	NA	NA	NA
AZX55039.1|3089870_3091004_-	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
AZX55040.1|3091003_3093685_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
AZX55041.1|3094055_3094637_+	OmpA family protein	NA	NA	NA	NA	NA
AZX55042.1|3094714_3095488_+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
AZX55043.1|3095484_3096162_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZX55044.1|3096377_3097559_+	MFS transporter	NA	NA	NA	NA	NA
AZX55045.1|3098035_3098293_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55046.1|3098331_3098514_+	addiction module toxin, HicA family	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
AZX55047.1|3098543_3099494_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX56106.1|3099623_3100016_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
AZX55048.1|3100292_3101204_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
AZX55049.1|3101328_3102303_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX55050.1|3102299_3103250_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	3116757	3170275	4106930	transposase,holin	Bacillus_phage(33.33%)	46	NA	NA
AZX55061.1|3116757_3117708_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55062.1|3117820_3118072_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55063.1|3118265_3118481_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55064.1|3118577_3119696_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AZX55065.1|3119815_3120028_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55066.1|3120187_3120409_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55067.1|3120461_3121412_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55068.1|3122588_3123959_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AZX55069.1|3123991_3124783_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55070.1|3124795_3125851_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55071.1|3125876_3126752_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55072.1|3126857_3127106_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55073.1|3127140_3128595_-	carboxylase	NA	NA	NA	NA	NA
AZX55074.1|3128591_3129113_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AZX55075.1|3129141_3130494_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX55076.1|3130717_3133606_-	metal-dependent phosphohydrolase	NA	NA	NA	NA	NA
AZX55077.1|3135750_3137052_+	phospholipase	NA	NA	NA	NA	NA
AZX55078.1|3137066_3137783_-	flagellar brake protein	NA	NA	NA	NA	NA
AZX55079.1|3138064_3138745_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
AZX55080.1|3138756_3138924_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55081.1|3139032_3139185_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55082.1|3139272_3139932_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
AZX55083.1|3140312_3142163_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
AZX55084.1|3142159_3143110_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55085.1|3144273_3145989_+	acetolactate synthase, large subunit, biosynthetic type	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
AZX55086.1|3145999_3146491_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
AZX55087.1|3146563_3147580_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
AZX55088.1|3147747_3148527_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
AZX55089.1|3148545_3149073_-	lipoprotein	NA	NA	NA	NA	NA
AZX55090.1|3149071_3149278_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55091.1|3149366_3149636_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
AZX55092.1|3149726_3151886_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
AZX55093.1|3152006_3152726_+	lipoprotein	NA	NA	NA	NA	NA
AZX55094.1|3152722_3153673_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55095.1|3153813_3155031_+	threonine ammonia-lyase	NA	NA	NA	NA	NA
AZX55096.1|3155024_3155636_-	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
AZX55097.1|3156269_3157247_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
AZX55098.1|3157390_3158137_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
AZX55099.1|3158158_3158605_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AZX55100.1|3159392_3161624_+|holin	high-affinity choline transporter BetT	holin	NA	NA	NA	NA
AZX55101.1|3161646_3162447_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55102.1|3162728_3163961_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZX55103.1|3164071_3165061_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX55104.1|3165091_3166480_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX55105.1|3168078_3169062_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX56108.1|3169258_3170275_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 27
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	3193298	3242320	4106930	transposase,holin	Vibrio_phage(25.0%)	44	NA	NA
AZX55121.1|3193298_3194249_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55122.1|3194331_3196290_+|holin	choline transporter	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
AZX55123.1|3196317_3197019_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55124.1|3197165_3197981_+	diacylglycerol kinase	NA	NA	NA	NA	NA
AZX55125.1|3197977_3198793_+	DNA repair exonuclease	NA	NA	NA	NA	NA
AZX55126.1|3198809_3199613_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AZX55127.1|3199596_3200031_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55128.1|3200027_3200462_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX56111.1|3200463_3201063_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55129.1|3201035_3201986_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55130.1|3201972_3202176_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55131.1|3202298_3203456_+	porin	NA	NA	NA	NA	NA
AZX55132.1|3203644_3204004_+	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA	NA
AZX55133.1|3204040_3204517_+	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA	NA
AZX55134.1|3204567_3205215_+	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA	NA
AZX55135.1|3205217_3206474_+	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA	NA
AZX55136.1|3206519_3207014_+	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA	NA
AZX55137.1|3207010_3208378_+	NADH oxidoreductase (quinone) subunit F	NA	NA	NA	NA	NA
AZX55138.1|3208393_3210721_+	NADH-quinone oxidoreductase subunit G	NA	NA	NA	NA	NA
AZX55139.1|3210720_3211794_+	NADH-quinone oxidoreductase subunit H	NA	NA	NA	NA	NA
AZX55140.1|3211815_3212304_+	NADH-quinone oxidoreductase subunit I	NA	NA	NA	NA	NA
AZX55141.1|3212321_3212969_+	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA	NA
AZX55142.1|3212965_3213274_+	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA	NA
AZX55143.1|3213291_3215304_+	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA	NA
AZX55144.1|3215300_3216803_+	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA	NA
AZX55145.1|3216813_3218298_+	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA	NA
AZX55146.1|3218314_3218644_+	DUF2818 domain-containing protein	NA	NA	NA	NA	NA
AZX55147.1|3218944_3221176_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX55148.1|3221387_3223658_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX55149.1|3223770_3224289_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX55150.1|3224298_3225075_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX55151.1|3225071_3226862_-	acetolactate synthase catalytic subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	26.1	2.0e-25
AZX55152.1|3226921_3227902_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX55153.1|3228039_3228957_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55154.1|3229085_3229946_-	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
AZX55155.1|3229981_3233437_-	transcription-repair coupling factor	NA	NA	NA	NA	NA
AZX55156.1|3233466_3234150_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AZX55157.1|3234146_3234635_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
AZX55158.1|3234733_3235684_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55159.1|3235782_3236733_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55160.1|3236729_3237749_-	fructose 1,6-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
AZX55161.1|3237758_3240467_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
AZX55162.1|3240614_3241271_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AZX55163.1|3241369_3242320_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	3293913	3336820	4106930	transposase	Planktothrix_phage(50.0%)	35	NA	NA
AZX55203.1|3293913_3294864_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55204.1|3294850_3295039_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55205.1|3294986_3295394_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZX55206.1|3295466_3297662_+	DNA methylase	NA	NA	NA	NA	NA
AZX55207.1|3297883_3298834_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55208.1|3298793_3299318_-	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AZX55209.1|3299449_3300421_+	hypothetical protein	NA	NA	NA	NA	NA
AZX56114.1|3300540_3302985_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX55210.1|3303000_3303591_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AZX55211.1|3303834_3304785_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55212.1|3304942_3306208_-	saccharopine dehydrogenase	NA	NA	NA	NA	NA
AZX55213.1|3306241_3307339_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
AZX55214.1|3307993_3308944_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55215.1|3308944_3309514_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55216.1|3309581_3310397_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55217.1|3310563_3312183_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX55218.1|3312261_3313203_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX55219.1|3313202_3314087_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX55220.1|3314090_3315743_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
AZX55221.1|3315782_3317180_+	amidase	NA	NA	NA	NA	NA
AZX55222.1|3317221_3318601_+	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
AZX55223.1|3318640_3318859_-	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
AZX55224.1|3319199_3320072_+	carboxyvinyl-carboxyphosphonate phosphorylmutase	NA	NA	NA	NA	NA
AZX55225.1|3320231_3321182_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55226.1|3321913_3322291_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
AZX55227.1|3322275_3322977_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55228.1|3323120_3323813_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
AZX55229.1|3323812_3324916_-	aminoglycoside phosphotransferase	NA	NA	NA	NA	NA
AZX55230.1|3325025_3327398_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
AZX55231.1|3327394_3328954_+	chaperone SurA	NA	NA	NA	NA	NA
AZX55232.1|3328978_3329776_+	ribosomal RNA small subunit methyltransferase A	NA	NA	NA	NA	NA
AZX55233.1|3329807_3330953_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
AZX55234.1|3331057_3332500_+	pyruvate kinase	NA	NA	NA	NA	NA
AZX56115.1|3332502_3333591_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55235.1|3335869_3336820_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	3346112	3378795	4106930	transposase,tRNA,tail,terminase	uncultured_Caudovirales_phage(20.0%)	42	NA	NA
AZX55248.1|3346112_3347843_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
AZX55249.1|3347908_3348481_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
AZX55250.1|3348461_3349148_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX55251.1|3349503_3350175_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
AZX55252.1|3350181_3350382_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55253.1|3350724_3351006_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55254.1|3351002_3351536_-	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
AZX55255.1|3351517_3352069_-	lysozyme	NA	NA	NA	NA	NA
AZX55256.1|3352047_3352290_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55257.1|3352294_3353107_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55258.1|3353106_3353370_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55259.1|3353588_3354005_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55260.1|3354009_3357966_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
AZX55261.1|3357958_3358348_-	hypothetical protein	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
AZX55262.1|3358344_3358878_-	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
AZX55263.1|3358945_3359305_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55264.1|3359314_3361927_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
AZX55265.1|3361952_3362243_-	hypothetical protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
AZX55266.1|3362260_3362590_-	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
AZX55267.1|3362599_3363118_-|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
AZX55268.1|3363372_3363873_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
AZX55269.1|3363880_3364303_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55270.1|3364299_3364698_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
AZX55271.1|3364694_3365090_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
AZX55272.1|3365089_3365290_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55273.1|3365291_3365774_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
AZX55274.1|3365836_3366088_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55275.1|3366097_3366745_-	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
AZX55276.1|3366762_3367713_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55277.1|3368141_3368744_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
AZX55278.1|3368866_3369109_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
AZX56116.1|3369114_3370170_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
AZX55279.1|3370198_3371617_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
AZX55280.1|3371619_3372897_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
AZX55281.1|3372883_3373333_-|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
AZX55282.1|3374008_3374959_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55283.1|3374976_3375198_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55284.1|3375212_3375911_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55285.1|3375903_3376224_+	hypothetical protein	NA	NA	NA	NA	NA
AZX56117.1|3376703_3377315_+	LexA family transcriptional repressor	NA	NA	NA	NA	NA
AZX55286.1|3377380_3377593_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55287.1|3377844_3378795_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	3706960	3839886	4106930	transposase,tRNA,integrase	uncultured_Mediterranean_phage(10.34%)	118	3751603:3751620	3796243:3796260
AZX55575.1|3706960_3707911_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55576.1|3707907_3708543_-	transporter	NA	NA	NA	NA	NA
AZX55577.1|3708672_3709572_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
AZX55578.1|3709667_3710159_+	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
AZX55579.1|3710205_3711171_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX55580.1|3712304_3713546_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.9	1.9e-14
AZX55581.1|3713659_3714676_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	43.8	3.5e-75
AZX55582.1|3714710_3715187_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55583.1|3715329_3716238_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
AZX55584.1|3716351_3717464_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	35.0	1.9e-21
AZX55585.1|3717564_3718098_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX55586.1|3718186_3719437_+	kynureninase	NA	NA	NA	NA	NA
AZX55587.1|3719538_3720051_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.3	8.5e-22
AZX55588.1|3719956_3720163_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55589.1|3720149_3721100_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55590.1|3721165_3722104_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.7	1.4e-09
AZX55591.1|3722126_3722753_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
AZX55592.1|3722749_3723406_-	HAD family hydrolase	NA	NA	NA	NA	NA
AZX55593.1|3723402_3724005_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55594.1|3724011_3724638_-	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	23.3	1.5e-07
AZX55595.1|3724779_3725349_+	bacterioferritin	NA	NA	NA	NA	NA
AZX55596.1|3725419_3726739_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
AZX55597.1|3726845_3727037_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
AZX55598.1|3727288_3728578_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX55599.1|3728732_3729728_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX55600.1|3729812_3730487_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55601.1|3730483_3731434_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55602.1|3731420_3731603_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55603.1|3731595_3732837_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.2	4.0e-25
AZX55604.1|3732833_3733778_+	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	33.3	9.5e-27
AZX55605.1|3733896_3734847_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55606.1|3734806_3735736_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX55607.1|3735789_3736125_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
AZX55608.1|3736169_3736934_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX55609.1|3736957_3737698_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55610.1|3737705_3739280_-	long-chain fatty acid--CoA ligase	NA	A0A2K9L3I8	Tupanvirus	22.6	2.0e-13
AZX55611.1|3739293_3740271_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX55612.1|3740543_3741143_-	ureidoglycolate hydrolase	NA	NA	NA	NA	NA
AZX55613.1|3741176_3748079_-	autotransporter BatB	NA	NA	NA	NA	NA
AZX55614.1|3748525_3748657_-	entericidin	NA	NA	NA	NA	NA
AZX55615.1|3748688_3748850_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55616.1|3748922_3749129_-	DUF3596 domain-containing protein	NA	NA	NA	NA	NA
AZX55617.1|3750133_3750793_+	haloacid dehalogenase	NA	NA	NA	NA	NA
AZX55618.1|3750820_3751966_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
3751603:3751620	attL	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
AZX55619.1|3752106_3752442_+	DUF1508 domain-containing protein	NA	NA	NA	NA	NA
AZX55620.1|3752516_3753377_-	Band 7 protein	NA	A0A2C9D0H9	Yersinia_phage	53.6	1.7e-51
AZX55621.1|3753640_3754342_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX55622.1|3754511_3754907_+	RidA family protein	NA	NA	NA	NA	NA
AZX55623.1|3755016_3755967_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55624.1|3755977_3756619_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55625.1|3756785_3757028_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55626.1|3757126_3758077_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55627.1|3758112_3758580_+	hypothetical protein	NA	Q3HQX1	Burkholderia_phage	71.3	2.1e-43
AZX55628.1|3758813_3759191_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55629.1|3759187_3759370_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55630.1|3759373_3760360_+	DNA recombinase	NA	H9C0R8	Aeromonas_phage	57.3	2.0e-67
AZX55631.1|3760356_3761004_+	exonuclease	NA	A0A0U2BXF3	Paracoccus_phage	41.4	2.0e-31
AZX55632.1|3761061_3761589_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55633.1|3761622_3762810_+	hypothetical protein	NA	A0A291L9X3	Bordetella_phage	37.8	1.5e-24
AZX55634.1|3762799_3763162_+	hypothetical protein	NA	A0A0H5ARN8	Pseudomonas_phage	47.9	1.8e-13
AZX55635.1|3763154_3763274_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55636.1|3763274_3763475_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX55637.1|3763471_3764461_-|integrase	site-specific integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.4	4.4e-75
AZX55638.1|3765947_3767918_-	DUF3120 domain-containing protein	NA	NA	NA	NA	NA
AZX55639.1|3768159_3768558_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55640.1|3768566_3769490_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55641.1|3769947_3770898_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55642.1|3771128_3772820_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
AZX55643.1|3772868_3773141_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
AZX55644.1|3773137_3773509_-	ribonuclease P protein component	NA	NA	NA	NA	NA
AZX55645.1|3773604_3773739_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
AZX55646.1|3774144_3775554_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
AZX55647.1|3775550_3776666_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.6e-41
AZX55648.1|3776760_3779214_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
AZX55649.1|3779332_3780124_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55650.1|3780243_3781671_+	amidase	NA	NA	NA	NA	NA
AZX56131.1|3781709_3782681_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX55651.1|3783099_3784263_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AZX55652.1|3784350_3785196_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX55653.1|3786752_3787703_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55654.1|3788257_3788632_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55655.1|3788706_3789765_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
AZX55656.1|3789788_3790739_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55657.1|3793620_3794790_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZX56132.1|3794890_3796498_+	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
3796243:3796260	attR	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
AZX55658.1|3796544_3798566_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
AZX55659.1|3798594_3798840_-	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
AZX55660.1|3798853_3800044_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
AZX55661.1|3800239_3801205_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX55662.1|3801227_3802367_-	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
AZX55663.1|3802578_3803541_+	immunogenic protein	NA	NA	NA	NA	NA
AZX55664.1|3803664_3805689_+	C4-dicarboxylate ABC transporter permease	NA	NA	NA	NA	NA
AZX55665.1|3805885_3808129_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZX55666.1|3808407_3808866_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55667.1|3809793_3812415_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55668.1|3812478_3815106_+	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
AZX55669.1|3815257_3816322_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX55670.1|3816318_3817092_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
AZX55671.1|3817100_3817934_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX55672.1|3817946_3818726_+	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
AZX56133.1|3818760_3820233_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AZX55673.1|3820260_3821019_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX55674.1|3821074_3822925_-	acetolactate synthase, large subunit, biosynthetic type	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
AZX55675.1|3823018_3823495_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX55676.1|3823511_3824432_-	bestrophin	NA	NA	NA	NA	NA
AZX55677.1|3824538_3825039_+	SET domain-containing protein	NA	NA	NA	NA	NA
AZX55678.1|3825412_3826105_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
AZX55679.1|3826413_3827364_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55680.1|3827360_3831134_-	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
AZX55681.1|3831470_3833360_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
AZX55682.1|3833371_3834265_+	cobalamin-binding protein	NA	NA	NA	NA	NA
AZX55683.1|3834290_3835166_+	thiazole synthase	NA	NA	NA	NA	NA
AZX55684.1|3835162_3836014_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
AZX55685.1|3836075_3836756_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
AZX55686.1|3836759_3837119_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55687.1|3837119_3838079_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55688.1|3838099_3838588_-	D-beta-D-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
AZX56134.1|3838869_3839886_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 31
CP025367	Bordetella pertussis strain H677 chromosome, complete genome	4106930	4005999	4070911	4106930	transposase	Planktothrix_phage(40.0%)	58	NA	NA
AZX55853.1|4005999_4006485_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55854.1|4006703_4007684_+	protein BugT	NA	NA	NA	NA	NA
AZX55855.1|4007950_4008760_+	Pertussis toxin subunit 1	NA	NA	NA	NA	NA
AZX55856.1|4008799_4009480_+	Pertussis toxin subunit 2	NA	NA	NA	NA	NA
AZX55857.1|4009473_4009932_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
AZX55858.1|4009943_4010306_+	Pertussis toxin subunit 5	NA	NA	NA	NA	NA
AZX55859.1|4010388_4011072_+	Pertussis toxin subunit 3	NA	NA	NA	NA	NA
AZX55860.1|4011127_4011436_+	type IV secretion protein A	NA	NA	NA	NA	NA
AZX55861.1|4011454_4011769_+	type IV secretion protein B	NA	NA	NA	NA	NA
AZX55862.1|4011765_4014240_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
AZX55863.1|4014247_4015639_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
AZX55864.1|4015635_4015821_+	type IV secretion protein I	NA	NA	NA	NA	NA
AZX55865.1|4015799_4016501_+	type IV secretion protein E	NA	NA	NA	NA	NA
AZX55866.1|4016497_4017319_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
AZX56143.1|4017299_4018424_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
AZX55867.1|4018416_4019436_+	type IV secretion protein H	NA	NA	NA	NA	NA
AZX55868.1|4019641_4020676_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX56144.1|4020776_4021568_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX55869.1|4021650_4022025_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
AZX55870.1|4022002_4023412_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
AZX55871.1|4023404_4024787_+	DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
AZX55872.1|4025121_4026726_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX55873.1|4026761_4027775_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX55874.1|4027785_4028712_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX55875.1|4029102_4030053_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55876.1|4030222_4031449_+	bifunctional glutamate N-acetyltransferase/amino-acid N-acetyltransferase	NA	NA	NA	NA	NA
AZX55877.1|4031648_4032515_+	DUF815 domain-containing protein	NA	NA	NA	NA	NA
AZX55878.1|4032507_4033470_+	NUDIX domain-containing protein	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
AZX55879.1|4033570_4034521_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55880.1|4034619_4035570_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55881.1|4035668_4036619_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX55882.1|4036615_4038109_-	RND transporter	NA	NA	NA	NA	NA
AZX55883.1|4038105_4041213_-	multidrug transporter subunit MdtC	NA	NA	NA	NA	NA
AZX55884.1|4041209_4044278_-	multidrug transporter subunit MdtB	NA	NA	NA	NA	NA
AZX55885.1|4044274_4045525_-	multidrug transporter subunit MdtA	NA	NA	NA	NA	NA
AZX55886.1|4045705_4046467_-	cell division protein ZapD	NA	NA	NA	NA	NA
AZX55887.1|4046499_4047150_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
AZX55888.1|4047152_4047992_-	prepilin peptidase	NA	NA	NA	NA	NA
AZX55889.1|4048232_4048976_+	hypothetical protein	NA	NA	NA	NA	NA
AZX55890.1|4049058_4049406_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AZX55891.1|4049503_4050346_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AZX55892.1|4050390_4051278_-	segregation/condensation protein A	NA	NA	NA	NA	NA
AZX55893.1|4051304_4051493_-	DUF3460 domain-containing protein	NA	NA	NA	NA	NA
AZX55894.1|4051590_4053048_+	MFS transporter	NA	NA	NA	NA	NA
AZX55895.1|4053034_4054561_+	glycerol kinase	NA	NA	NA	NA	NA
AZX55896.1|4054579_4055047_-	hypothetical protein	NA	NA	NA	NA	NA
AZX55897.1|4055046_4056069_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX55898.1|4056189_4056930_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
AZX55899.1|4056984_4058085_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX55900.1|4058086_4059277_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX55901.1|4059396_4060413_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
AZX55902.1|4060731_4061403_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
AZX55903.1|4061399_4062308_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX55904.1|4062519_4063167_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
AZX55905.1|4067018_4068095_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AZX55906.1|4068105_4068915_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX55907.1|4069004_4069778_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX55908.1|4069960_4070911_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
