assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_004028355.1_ASM402835v1	CP028841	Streptococcus pyogenes strain CCUG 4207 chromosome, complete genome	2	1050901-1051002	2	CRISPRCasFinder	no		cas3,DinG,csm6,cas9,cas1,cas2,csn2,cas4,cas7,cas8c,cas5,DEDDh,csa3	Orphan	AATAATTGGTATAGTCTAATTATA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csm6,cas9,cas1,cas2,csn2,cas4,cas7,cas8c,cas5,DEDDh,csa3	NA,NA|262aa|down_6|CP028841.1_1058832_1059618_+,NA|63aa|down_8|CP028841.1_1060949_1061138_-	NA|83aa|up_9|CP028841.1_1038618_1038867_-	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|773aa|up_8|CP028841.1_1039230_1041549_-	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|441aa|up_7|CP028841.1_1042077_1043400_+	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism]	NA|412aa|up_6|CP028841.1_1043519_1044755_+	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|258aa|up_5|CP028841.1_1045123_1045897_-	pfam07373, CAMP_factor, CAMP factor (Cfa)	NA|279aa|up_4|CP028841.1_1046266_1047103_-	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily	NA|210aa|up_3|CP028841.1_1047118_1047748_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|214aa|up_2|CP028841.1_1047757_1048399_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|112aa|up_1|CP028841.1_1048504_1048840_-	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]	NA|605aa|up_0|CP028841.1_1049035_1050850_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|186aa|down_0|CP028841.1_1051025_1051583_-	TIGR02227, Inactive_signal_peptidase_IA	NA|501aa|down_1|CP028841.1_1051800_1053303_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|338aa|down_2|CP028841.1_1053365_1054379_-	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|1037aa|down_3|CP028841.1_1054458_1057569_-	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed	NA|124aa|down_4|CP028841.1_1057753_1058125_+	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|233aa|down_5|CP028841.1_1058124_1058823_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|262aa|down_6|CP028841.1_1058832_1059618_+	NA	NA|205aa|down_7|CP028841.1_1059744_1060359_-	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|63aa|down_8|CP028841.1_1060949_1061138_-	NA	NA|252aa|down_9|CP028841.1_1061358_1062114_+	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain
GCA_004028355.1_ASM402835v1	CP028841	Streptococcus pyogenes strain CCUG 4207 chromosome, complete genome	4	1317644-1317938	4,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5	cas3,DinG,csm6,cas9,cas1,cas2,csn2,cas4,cas7,cas8c,cas5,DEDDh,csa3	 Type I-U?,Type I-U,Type I-C	ATTTCAATCCACTCACCCATGAAGGGTGAGAC,ATTTCAATCCACTCACCCATGAAGGGTGAGAC,ATTTCAATCCACTCACCCATGAAGGGTGAGAC	32,32,32	6	6	1317676-1317708|1317741-1317774|1317807-1317839|1317677-1317709|1317742-1317775|1317808-1317840	CP028841.1_850316-850348|CP028841.1_1388239-1388206|CP028841.1_551171-551203|CP028841.1_850316-850348|CP028841.1_1388239-1388206|CP028841.1_551171-551203	I-C:I-C:I-C	4,4,4	4	TypeI-U,TypeI-U?,TypeI-C	cas3,DinG,csm6,cas9,cas1,cas2,csn2,cas4,cas7,cas8c,cas5,DEDDh,csa3	NA,NA	NA|412aa|up_9|CP028841.1_1307578_1308814_-	PRK01388, PRK01388, arginine deiminase; Provisional	NA|227aa|up_8|CP028841.1_1309087_1309768_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|158aa|up_7|CP028841.1_1309909_1310383_+	COG1438, ArgR, Arginine repressor [Transcription]	NA|239aa|up_6|CP028841.1_1310548_1311265_-	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|360aa|up_5|CP028841.1_1311278_1312358_-	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|578aa|up_4|CP028841.1_1312430_1314164_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|247aa|up_3|CP028841.1_1314160_1314901_-	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|369aa|up_2|CP028841.1_1314988_1316095_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|208aa|up_1|CP028841.1_1316137_1316761_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|237aa|up_0|CP028841.1_1316773_1317484_-	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	cas2|98aa|down_0|CP028841.1_1318086_1318380_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|342aa|down_1|CP028841.1_1318390_1319416_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|225aa|down_2|CP028841.1_1319412_1320087_-	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense    mechanisms]	cas7|283aa|down_3|CP028841.1_1320088_1320937_-	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas8c|632aa|down_4|CP028841.1_1320941_1322837_-	cd09642, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|243aa|down_5|CP028841.1_1322836_1323565_-	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	NA|883aa|down_6|CP028841.1_1326258_1328907_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|188aa|down_7|CP028841.1_1328908_1329472_-	pfam13238, AAA_18, AAA domain	NA|67aa|down_8|CP028841.1_1329468_1329669_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|132aa|down_9|CP028841.1_1330072_1330468_-	PRK07758, PRK07758, hypothetical protein; Provisional
