The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP035054	Lactobacillus fermentum strain SRCM103285 chromosome, complete genome	2146888	61842	177428	2146888	transposase,tRNA	Streptococcus_phage(17.86%)	104	NA	NA
QAR21087.1|61842_62130_+|transposase	transposase	transposase	NA	NA	NA	NA
QAR21088.1|62153_63032_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	36.4	2.6e-42
QAR21089.1|63622_64669_+	ABC transporter permease	NA	NA	NA	NA	NA
QAR21090.1|64673_65345_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.4	5.0e-30
QAR21091.1|65673_66255_-	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	34.9	1.7e-21
QAR21092.1|66839_67271_+	CopY/TcrY family copper transport repressor	NA	NA	NA	NA	NA
QAR21093.1|67521_69717_+	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	30.3	1.1e-60
QAR21094.1|69769_69934_+	DUF2933 domain-containing protein	NA	NA	NA	NA	NA
QAR21095.1|69952_70249_+	lysophospholipase	NA	NA	NA	NA	NA
QAR21096.1|70511_71732_+|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.0	1.8e-94
QAR21097.1|72336_73716_+	MFS transporter	NA	NA	NA	NA	NA
QAR21098.1|73712_74636_+	ferrochelatase	NA	NA	NA	NA	NA
QAR21099.1|74705_75194_+	histidine kinase	NA	NA	NA	NA	NA
QAR21100.1|76254_76881_+	recombinase family protein	NA	K7PJT4	Enterobacteria_phage	35.3	1.3e-11
QAR21101.1|76850_77474_+	cation transporter	NA	NA	NA	NA	NA
QAR22942.1|77601_77814_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QAR21102.1|77872_78796_-|transposase	IS30 family transposase	transposase	H7BVY4	unidentified_phage	30.3	2.2e-28
QAR21103.1|79115_79826_+	VIT family protein	NA	NA	NA	NA	NA
QAR22943.1|81628_81718_+	PbsX family transcriptional regulator	NA	NA	NA	NA	NA
QAR21104.1|81724_82159_+	dihydrodipicolinate synthase	NA	NA	NA	NA	NA
QAR21105.1|82229_82364_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21106.1|82441_82987_-|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	43.5	9.7e-32
QAR21107.1|84679_85339_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	43.3	8.1e-41
QAR21108.1|85921_87601_-	D-lactate dehydrogenase	NA	NA	NA	NA	NA
QAR21109.1|89243_89915_-	hypothetical protein	NA	NA	NA	NA	NA
QAR21110.1|90162_91455_+	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA	NA
QAR21111.1|91457_93266_+	oligoendopeptidase F	NA	NA	NA	NA	NA
QAR21112.1|93537_94539_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
QAR21113.1|94555_95302_-	SDR family NAD(P)-dependent oxidoreductase	NA	A0A0M4JSW6	Mollivirus	28.0	1.4e-17
QAR21114.1|95460_95916_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
QAR21115.1|96077_96551_+	universal stress protein	NA	NA	NA	NA	NA
QAR21116.1|96917_98357_-	NADP-dependent phosphogluconate dehydrogenase	NA	E3SPS4	Prochlorococcus_phage	30.2	1.1e-29
QAR21117.1|98541_100023_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	36.9	4.0e-72
QAR21118.1|100513_101683_-	MFS transporter	NA	NA	NA	NA	NA
QAR21119.1|101875_102307_+	VOC family protein	NA	NA	NA	NA	NA
QAR21120.1|102551_103016_-	ribonucleotide reductase assembly protein NrdI	NA	NA	NA	NA	NA
QAR21121.1|103102_104488_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
QAR21122.1|104636_105164_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21123.1|105173_105689_+	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
QAR21124.1|105954_106767_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA	NA
QAR21125.1|107121_108558_-	C69 family dipeptidase	NA	NA	NA	NA	NA
QAR21126.1|108617_109361_-	hypothetical protein	NA	NA	NA	NA	NA
QAR21127.1|109364_109865_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
QAR21128.1|110008_110737_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
QAR21129.1|110743_111541_+	HAD family hydrolase	NA	NA	NA	NA	NA
QAR21130.1|111746_114146_+	phosphoketolase family protein	NA	NA	NA	NA	NA
QAR21131.1|114425_114860_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21132.1|115198_116704_+	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA	NA
QAR21133.1|117719_118661_-|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	42.3	6.2e-34
QAR21134.1|118603_119140_-|transposase	transposase	transposase	NA	NA	NA	NA
QAR21135.1|119959_121384_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA	NA
QAR21136.1|121443_122391_-	ribokinase	NA	NA	NA	NA	NA
QAR21137.1|122424_123441_-	DUF4432 family protein	NA	NA	NA	NA	NA
QAR21138.1|123454_124108_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
QAR21139.1|124211_125171_+	sugar-binding transcriptional regulator	NA	NA	NA	NA	NA
QAR21140.1|125415_126333_+	ribokinase	NA	NA	NA	NA	NA
QAR21141.1|126356_126752_+	D-ribose pyranase	NA	NA	NA	NA	NA
QAR21142.1|126766_128095_+	L-fucose:H+ symporter permease	NA	NA	NA	NA	NA
QAR21143.1|128282_130004_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
QAR21144.1|130268_131456_+|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	29.1	7.5e-37
QAR21145.1|131468_131669_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21146.1|132183_132855_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
QAR21147.1|133095_134379_+	nickel-dependent lactate racemase	NA	NA	NA	NA	NA
QAR21148.1|134386_135145_+	nickel pincer cofactor biosynthesis protein LarB	NA	A0A288TYA6	Enterococcus_phage	47.2	3.7e-21
QAR21149.1|135144_136509_+	nickel pincer cofactor biosynthesis protein LarC	NA	NA	NA	NA	NA
QAR21150.1|136510_137221_+	aquaporin family protein	NA	NA	NA	NA	NA
QAR21151.1|137245_138073_+	ATP-dependent sacrificial sulfur transferase LarE	NA	NA	NA	NA	NA
QAR21152.1|138101_139112_+	HoxN/HupN/NixA family nickel/cobalt transporter	NA	NA	NA	NA	NA
QAR21153.1|139411_140320_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	29.6	1.4e-11
QAR21154.1|140256_140955_-|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	31.2	1.7e-20
QAR21155.1|142370_143294_-|transposase	IS30 family transposase	transposase	H7BVY4	unidentified_phage	31.9	5.1e-33
QAR21156.1|143428_144109_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
QAR21157.1|144500_145247_+	transaldolase	NA	A0A222YW60	Synechococcus_phage	29.2	1.1e-09
QAR21158.1|145259_147263_+	transketolase	NA	NA	NA	NA	NA
QAR21159.1|147473_148835_+	MFS transporter	NA	NA	NA	NA	NA
QAR22944.1|148930_149749_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA	NA
QAR21160.1|149928_150279_-	ANTAR domain-containing protein	NA	NA	NA	NA	NA
QAR21161.1|150305_150776_-	universal stress protein	NA	NA	NA	NA	NA
QAR21162.1|150875_151274_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21163.1|151280_151757_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21164.1|152210_153062_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
QAR21165.1|153058_153484_-	XRE family transcriptional regulator	NA	A0A1S5SDR1	Streptococcus_phage	34.4	3.8e-07
QAR21166.1|153613_154576_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
QAR21167.1|154792_155314_+|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	36.0	5.6e-21
QAR21168.1|157041_158055_+	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	30.4	5.6e-17
QAR21169.1|158472_160434_-	sodium:proton antiporter	NA	NA	NA	NA	NA
QAR21170.1|160524_160884_-	hypothetical protein	NA	NA	NA	NA	NA
QAR21171.1|160928_161582_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
QAR21172.1|161571_162954_-	ABC transporter ATP-binding protein	NA	A0A1V0SI78	Klosneuvirus	21.2	9.1e-10
QAR21173.1|162957_163527_-	ABC transporter permease	NA	NA	NA	NA	NA
QAR21174.1|164063_165023_-	nucleoside hydrolase	NA	NA	NA	NA	NA
QAR21175.1|165195_166188_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	41.1	1.0e-18
QAR21176.1|166381_168235_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	34.7	1.2e-84
QAR21177.1|168296_168527_+	copper-binding protein	NA	NA	NA	NA	NA
QAR21178.1|168526_169075_+	DNA-binding protein	NA	NA	NA	NA	NA
QAR21179.1|169052_169700_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
QAR21180.1|169800_170280_-	hypothetical protein	NA	NA	NA	NA	NA
QAR21181.1|170671_172801_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	49.8	4.6e-170
QAR21182.1|173024_173678_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
QAR21183.1|174076_174934_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
QAR22945.1|174987_175566_-|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	43.9	1.9e-33
QAR22946.1|175486_175705_-|transposase	transposase	transposase	NA	NA	NA	NA
QAR21184.1|175979_176903_-|transposase	IS30 family transposase	transposase	H7BVY4	unidentified_phage	31.9	5.1e-33
QAR21185.1|176984_177428_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
CP035054	Lactobacillus fermentum strain SRCM103285 chromosome, complete genome	2146888	220078	292335	2146888	transposase,tRNA,integrase	Streptococcus_phage(35.71%)	56	224752:224776	301462:301486
QAR22949.1|220078_220477_+|transposase	IS200/IS605 family transposase	transposase	A0A286QN76	Streptococcus_phage	62.9	1.1e-45
QAR21220.1|220476_221652_+|transposase	transposase	transposase	A0A0P0ICY9	Lactobacillus_phage	54.9	2.6e-114
QAR21221.1|222265_222763_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QAR21222.1|222921_224535_+	APC family permease	NA	NA	NA	NA	NA
224752:224776	attL	GGCCCGTGGTTGGGGAGCACGTTAT	NA	NA	NA	NA
QAR21223.1|224883_225606_+	nicotinamide mononucleotide transporter	NA	G3BLP7	Salmonella_phage	24.3	1.5e-11
QAR21224.1|226998_228276_-	GTPase HflX	NA	NA	NA	NA	NA
QAR21225.1|228297_228942_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
QAR21226.1|229066_229723_-	cytochrome O ubiquinol oxidase	NA	NA	NA	NA	NA
QAR21227.1|229905_232200_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
QAR21228.1|232292_233198_-	DMT family transporter	NA	NA	NA	NA	NA
QAR21229.1|233431_235525_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	45.3	5.2e-150
QAR21230.1|235813_236563_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
QAR21231.1|236785_237337_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QAR21232.1|237447_238371_+	type I pantothenate kinase	NA	NA	NA	NA	NA
QAR21233.1|238564_239818_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
QAR21234.1|239830_240502_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	29.1	8.9e-19
QAR21235.1|240515_241127_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
QAR21236.1|241441_242995_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	28.0	3.0e-17
QAR21237.1|243217_244153_+	ParA family protein	NA	E9LUK9	Lactobacillus_phage	34.5	7.2e-35
QAR21238.1|244157_244505_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21239.1|244491_245142_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21240.1|245141_249548_+	restriction endonuclease	NA	A0A1V0SII8	Klosneuvirus	20.9	5.1e-22
QAR21241.1|249544_250255_+	DNA methyltransferase	NA	NA	NA	NA	NA
QAR21242.1|250258_251152_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21243.1|251212_252007_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21244.1|251993_253106_+	AAA family ATPase	NA	NA	NA	NA	NA
QAR21245.1|253574_254855_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	36.2	2.4e-73
QAR21246.1|254932_255139_+	DUF3173 domain-containing protein	NA	NA	NA	NA	NA
QAR21247.1|255131_256406_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	24.4	6.9e-20
QAR21248.1|256954_258313_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
QAR21249.1|258691_261034_+	nitric-oxide reductase large subunit	NA	NA	NA	NA	NA
QAR21250.1|264355_264562_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21251.1|264501_265263_+	DUF4767 domain-containing protein	NA	NA	NA	NA	NA
QAR21252.1|265473_266046_+	DUF4767 domain-containing protein	NA	NA	NA	NA	NA
QAR21253.1|266093_266414_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
QAR21254.1|266482_267433_+	nitronate monooxygenase	NA	NA	NA	NA	NA
QAR21255.1|267596_268253_+	arginase family protein	NA	NA	NA	NA	NA
QAR21256.1|268368_268689_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA	NA
QAR21257.1|268862_269519_+	1-deoxy-d-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
QAR21258.1|269886_270555_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QAR21259.1|270641_272627_+	ABC transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	38.3	7.1e-32
QAR21260.1|272844_273318_+	FMN-binding protein	NA	NA	NA	NA	NA
QAR21261.1|273321_274098_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
QAR21262.1|274081_275356_+	iron reductase	NA	NA	NA	NA	NA
QAR22950.1|275696_276164_-|tRNA	prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
QAR21263.1|276210_277362_-	M20 family peptidase	NA	NA	NA	NA	NA
QAR21264.1|277374_278550_-	hypothetical protein	NA	NA	NA	NA	NA
QAR21265.1|279216_281787_-	ABC transporter permease	NA	NA	NA	NA	NA
QAR21266.1|281787_282489_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.6	3.7e-36
QAR21267.1|282606_283179_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
QAR21268.1|283171_285046_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21269.1|286434_287222_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QAR21270.1|287484_287799_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
QAR21271.1|288097_290041_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	35.7	5.2e-96
QAR21272.1|290286_290841_+	recombinase family protein	NA	A0A219Y9V9	Aeromonas_phage	45.6	3.5e-37
QAR21273.1|290886_292335_+|transposase	transposase	transposase	NA	NA	NA	NA
301462:301486	attR	ATAACGTGCTCCCCAACCACGGGCC	NA	NA	NA	NA
>prophage 3
CP035054	Lactobacillus fermentum strain SRCM103285 chromosome, complete genome	2146888	444152	533484	2146888	protease,terminase,tRNA,portal,head,tail,transposase,capsid,holin	Erysipelothrix_phage(62.16%)	84	NA	NA
QAR21416.1|444152_444929_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
QAR21417.1|445035_445479_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
QAR21418.1|445492_445888_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
QAR21419.1|445983_447087_-	endonuclease	NA	NA	NA	NA	NA
QAR21420.1|447370_448144_+	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA	NA
QAR21421.1|448418_449033_+	N-acetylmuramidase	NA	S5M633	Brevibacillus_phage	51.7	2.9e-32
QAR21422.1|449048_449636_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
QAR21423.1|449637_450810_+	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
QAR21424.1|450987_453258_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.8	2.2e-133
QAR21425.1|453259_455299_+	NAD-dependent DNA ligase LigA	NA	A0A1W6DX16	Sphingobium_phage	36.3	3.1e-99
QAR21426.1|455301_456414_+	CamS family sex pheromone protein	NA	NA	NA	NA	NA
QAR21427.1|456588_456909_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
QAR21428.1|456908_458372_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
QAR21429.1|458385_459810_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
QAR21430.1|459822_460830_+	diacylglycerol kinase	NA	NA	NA	NA	NA
QAR21431.1|460944_462324_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	52.2	7.9e-131
QAR21432.1|462509_463403_+	ATP-binding protein	NA	NA	NA	NA	NA
QAR21433.1|463414_463744_+	DUF4325 domain-containing protein	NA	NA	NA	NA	NA
QAR21434.1|463740_464283_+	PIN domain-containing protein	NA	NA	NA	NA	NA
QAR22955.1|464345_465911_-	recombinase family protein	NA	A0A2K5B2B4	Erysipelothrix_phage	49.5	4.5e-130
QAR21435.1|465926_466340_-	hypothetical protein	NA	NA	NA	NA	NA
QAR21436.1|466346_467864_-	recombinase family protein	NA	A0A2K5B2B2	Erysipelothrix_phage	40.6	2.0e-106
QAR21437.1|468203_469109_-	1,4-beta-N-acetylmuramidase	NA	A0A2K5B2A3	Erysipelothrix_phage	40.9	1.9e-48
QAR21438.1|469113_469521_-|holin	holin	holin	A0A2K5B2A2	Erysipelothrix_phage	64.2	9.4e-40
QAR21439.1|469517_469934_-|head,tail	head-tail adaptor protein	head,tail	A0A0A7RUH8	Clostridium_phage	38.6	4.8e-07
QAR21440.1|469933_470326_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
QAR21441.1|470325_470622_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
QAR21442.1|470632_471823_-|capsid	phage major capsid protein	capsid	A0A2I4R671	Erysipelothrix_phage	60.9	3.4e-138
QAR21443.1|471842_472517_-|protease	Clp protease ClpP	protease	A0A2K5B288	Erysipelothrix_phage	58.5	2.8e-57
QAR21444.1|472513_473782_-|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	63.3	5.5e-155
QAR22956.1|473778_475344_-|terminase	terminase large subunit	terminase	A0A2K5B285	Erysipelothrix_phage	78.2	2.8e-249
QAR21445.1|475446_475653_-	DUF5049 domain-containing protein	NA	NA	NA	NA	NA
QAR21446.1|475628_475868_-	DUF4314 domain-containing protein	NA	NA	NA	NA	NA
QAR21447.1|475833_476505_-	hypothetical protein	NA	A0A2K5B280	Erysipelothrix_phage	42.0	4.8e-41
QAR21448.1|476567_477797_-	DNA modification methylase	NA	A0A2I4R670	Erysipelothrix_phage	63.6	1.0e-153
QAR21449.1|477796_478339_-|terminase	terminase	terminase	A0A2K5B277	Erysipelothrix_phage	62.1	9.2e-59
QAR21450.1|478475_478853_-	HNH endonuclease	NA	A0A2K5B276	Erysipelothrix_phage	56.4	1.7e-35
QAR21451.1|478995_479466_-	restriction endonuclease	NA	NA	NA	NA	NA
QAR21452.1|479465_480821_-	DEAD/DEAH box helicase	NA	A0A2K5B273	Erysipelothrix_phage	69.3	2.1e-160
QAR21453.1|480801_481083_-	VRR-NUC domain-containing protein	NA	A0A2K5B272	Erysipelothrix_phage	58.9	7.2e-23
QAR21454.1|481327_483586_-	DNA primase	NA	E4ZFK6	Streptococcus_phage	49.1	1.4e-212
QAR21455.1|483582_483996_-	hypothetical protein	NA	A0A2K5B270	Erysipelothrix_phage	36.6	5.5e-19
QAR21456.1|483982_484672_-	transcriptional regulator	NA	A0A2K5B268	Erysipelothrix_phage	59.7	9.0e-75
QAR21457.1|484773_486708_-	hypothetical protein	NA	A0A2K5B2B0	Erysipelothrix_phage	61.1	8.3e-235
QAR22957.1|486762_487347_-	DUF2815 family protein	NA	A0A2K5B2A9	Erysipelothrix_phage	63.4	3.1e-60
QAR21458.1|487327_488467_-	DUF2800 domain-containing protein	NA	A0A2K5B2A8	Erysipelothrix_phage	53.6	1.4e-109
QAR21459.1|488466_488775_-	hypothetical protein	NA	NA	NA	NA	NA
QAR21460.1|488761_488962_-	hypothetical protein	NA	A0A2I4R673	Erysipelothrix_phage	47.1	2.7e-08
QAR21461.1|489038_489569_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22958.1|489968_491270_+	DUF1837 domain-containing protein	NA	NA	NA	NA	NA
QAR21462.1|491272_493906_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
QAR21463.1|493916_494147_+	XRE family transcriptional regulator	NA	A0A2K5B263	Erysipelothrix_phage	64.5	4.8e-17
QAR21464.1|494222_497288_+	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
QAR21465.1|497291_498914_+	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
QAR21466.1|498900_500097_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
QAR21467.1|500148_501351_+	ATP-binding protein	NA	NA	NA	NA	NA
QAR21468.1|502053_502557_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QAR21469.1|503659_504538_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	36.4	3.4e-42
QAR21470.1|504561_504849_-|transposase	transposase	transposase	NA	NA	NA	NA
QAR21471.1|505587_506958_+	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	1.1e-10
QAR21472.1|508199_508814_-|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	38.0	7.3e-28
QAR21473.1|509459_510581_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
QAR22959.1|512761_515632_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
QAR21474.1|515850_516729_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	35.7	1.7e-41
QAR21475.1|516752_517040_-|transposase	transposase	transposase	NA	NA	NA	NA
QAR21476.1|517478_518093_-|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	37.5	3.1e-26
QAR21477.1|518480_519878_-	Na+/H+ antiporter NhaC	NA	NA	NA	NA	NA
QAR21478.1|520265_521048_-	dimethylargininase	NA	NA	NA	NA	NA
QAR21479.1|521123_521630_+|tRNA	prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
QAR21480.1|521693_523232_+	copper oxidase	NA	NA	NA	NA	NA
QAR21481.1|523373_523817_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
QAR21482.1|523819_524392_+	diguanylate cyclase	NA	NA	NA	NA	NA
QAR21483.1|524554_525244_+	class I SAM-dependent methyltransferase	NA	A0A097BYE1	Leuconostoc_phage	41.1	1.0e-33
QAR21484.1|525281_525503_-	hypothetical protein	NA	NA	NA	NA	NA
QAR21485.1|525519_526113_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QAR21486.1|526203_526722_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	46.8	9.2e-32
QAR21487.1|526753_527404_-	MFS transporter	NA	NA	NA	NA	NA
QAR21488.1|527367_527553_-	hypothetical protein	NA	NA	NA	NA	NA
QAR21489.1|527506_527917_-	MFS transporter	NA	NA	NA	NA	NA
QAR21490.1|528124_528673_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
QAR21491.1|530620_531181_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21492.1|531261_531729_+	DNA starvation/stationary phase protection protein	NA	A0A291I9P0	Lactobacillus_phage	31.5	7.1e-15
QAR22960.1|531910_532309_+|transposase	IS200/IS605 family transposase	transposase	A0A286QN76	Streptococcus_phage	62.9	1.1e-45
QAR21493.1|532308_533484_+|transposase	transposase	transposase	A0A0P0ICY9	Lactobacillus_phage	55.2	6.8e-115
>prophage 4
CP035054	Lactobacillus fermentum strain SRCM103285 chromosome, complete genome	2146888	753398	873863	2146888	transposase,portal,tRNA	Bacillus_phage(20.83%)	102	NA	NA
QAR21708.1|753398_754157_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
QAR21709.1|754167_755595_+	amino acid permease	NA	NA	NA	NA	NA
QAR21710.1|755715_756075_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
QAR21711.1|756502_761335_+	dextransucrase	NA	NA	NA	NA	NA
QAR21712.1|761455_761908_+	DUF1445 domain-containing protein	NA	NA	NA	NA	NA
QAR21713.1|762243_763209_+	aspartate carbamoyltransferase catalytic subunit	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	29.4	5.9e-24
QAR21714.1|763208_764498_+	dihydroorotase	NA	NA	NA	NA	NA
QAR21715.1|764499_765582_+	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.6	7.3e-55
QAR21716.1|765581_768761_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
QAR21717.1|768773_769691_+	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
QAR21718.1|769922_770729_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
QAR21719.1|770821_772231_+	RNA methyltransferase	NA	NA	NA	NA	NA
QAR21720.1|772806_774057_+|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	37.8	7.3e-59
QAR21721.1|774252_775011_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	31.4	8.2e-13
QAR21722.1|775167_776253_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
QAR21723.1|776308_777418_-	phosphomevalonate kinase	NA	NA	NA	NA	NA
QAR21724.1|777437_778427_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
QAR21725.1|778428_779364_-	mevalonate kinase	NA	NA	NA	NA	NA
QAR21726.1|779592_782433_+	ATP-dependent DNA helicase	NA	A0A1X9I5C8	Streptococcus_phage	34.8	9.5e-62
QAR21727.1|782483_783002_+	peptidase	NA	NA	NA	NA	NA
QAR21728.1|783028_784324_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	29.2	7.4e-54
QAR21729.1|784415_785144_+	DnaD domain protein	NA	A0A0N7AE27	Bacillus_phage	37.1	3.5e-13
QAR21730.1|785243_786251_+	DUF1002 domain-containing protein	NA	NA	NA	NA	NA
QAR21731.1|786567_787587_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA	NA
QAR21732.1|787709_788621_+	EamA family transporter	NA	NA	NA	NA	NA
QAR21733.1|788727_790992_-	carboxypeptidase	NA	NA	NA	NA	NA
QAR21734.1|790984_791620_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	36.0	1.9e-23
QAR21735.1|791711_792308_+	DUF1273 domain-containing protein	NA	NA	NA	NA	NA
QAR21736.1|792406_792775_+	cell division regulator GpsB	NA	NA	NA	NA	NA
QAR21737.1|793427_795362_+	GTP-binding protein	NA	D0R0F5	Streptococcus_phage	28.5	3.1e-64
QAR21738.1|795469_796651_+	ATP-binding protein	NA	NA	NA	NA	NA
QAR21739.1|796654_797104_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
QAR21740.1|797146_798280_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
QAR21741.1|799498_800977_-	amidase	NA	NA	NA	NA	NA
QAR21742.1|801774_802653_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21743.1|802638_803517_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	36.1	1.7e-41
QAR21744.1|803540_803828_-|transposase	transposase	transposase	NA	NA	NA	NA
QAR21745.1|803949_804648_+	glycosyltransferase	NA	NA	NA	NA	NA
QAR21746.1|804734_805424_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
QAR21747.1|805637_806501_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
QAR21748.1|806724_807327_+	nitroreductase family protein	NA	NA	NA	NA	NA
QAR21749.1|807482_807884_-	ribonuclease HI family protein	NA	NA	NA	NA	NA
QAR21750.1|807896_808331_+	VPDSG-CTERM exosortase interaction domain protein	NA	NA	NA	NA	NA
QAR21751.1|808330_808768_+	signal peptidase II	NA	NA	NA	NA	NA
QAR22965.1|808808_809684_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
QAR21752.1|809713_810796_+	carbamoyl phosphate synthase small subunit	NA	NA	NA	NA	NA
QAR21753.1|810797_813302_+	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
QAR21754.1|813494_814130_-	carbonic anhydrase family protein	NA	NA	NA	NA	NA
QAR21755.1|814256_815159_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAR21756.1|815365_815710_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
QAR21757.1|815810_816950_-|transposase	IS30 family transposase	transposase	H7BUM7	unidentified_phage	32.5	2.2e-41
QAR21758.1|817439_817757_+	ArsR family transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	51.1	4.0e-22
QAR21759.1|817807_818845_+	ACR3 family arsenite efflux transporter	NA	NA	NA	NA	NA
QAR21760.1|818856_819273_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	46.8	1.0e-25
QAR21761.1|819461_820682_-|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.0	2.6e-93
QAR21762.1|821778_822687_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.3	4.0e-22
QAR22966.1|822748_823915_+	ABC transporter permease	NA	NA	NA	NA	NA
QAR21763.1|824516_825395_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	36.4	2.0e-42
QAR21764.1|825418_825706_-|transposase	transposase	transposase	NA	NA	NA	NA
QAR21765.1|825667_826276_+|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	34.2	1.9e-15
QAR21766.1|827232_828465_-	hypothetical protein	NA	NA	NA	NA	NA
QAR21767.1|828956_829193_-	hypothetical protein	NA	NA	NA	NA	NA
QAR21768.1|829279_829534_-	RepB family plasmid replication initiator protein	NA	NA	NA	NA	NA
QAR21769.1|829627_830506_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	35.7	1.3e-41
QAR21770.1|830529_830817_-|transposase	transposase	transposase	NA	NA	NA	NA
QAR21771.1|830989_831883_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
QAR21772.1|831902_832277_-	hypothetical protein	NA	NA	NA	NA	NA
QAR21773.1|833295_834219_+|transposase	IS30 family transposase	transposase	H7BVY4	unidentified_phage	31.9	5.1e-33
QAR21774.1|836024_837716_-	fibronectin/fibrinogen-binding protein	NA	M1I5P2	Paramecium_bursaria_Chlorella_virus	36.2	1.5e-09
QAR21775.1|837906_838785_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	38.9	1.9e-16
QAR21776.1|838781_839393_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21777.1|839666_840410_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
QAR21778.1|840406_841063_-	HD domain-containing protein	NA	A0A2P1EMT6	Moumouvirus	27.8	4.9e-06
QAR21779.1|841185_841827_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
QAR21780.1|841927_842452_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QAR21781.1|842683_843544_-	homoserine kinase	NA	NA	NA	NA	NA
QAR21782.1|843553_844831_-	homoserine dehydrogenase	NA	NA	NA	NA	NA
QAR21783.1|846460_847162_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
QAR21784.1|847158_847485_+	branched-chain amino acid transporter AzlD	NA	NA	NA	NA	NA
QAR21785.1|847766_848087_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
QAR21786.1|848426_849518_+	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA	NA
QAR21787.1|849520_850498_+	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
QAR21788.1|850513_851803_+	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
QAR21789.1|851809_853216_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.8	9.5e-47
QAR21790.1|853244_854264_+	lipoate--protein ligase	NA	NA	NA	NA	NA
QAR21791.1|854318_855440_+	lipolytic protein G-D-S-L family protein	NA	NA	NA	NA	NA
QAR22967.1|855567_855726_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAR21792.1|855774_856083_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21793.1|856055_856268_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAR21794.1|856474_857701_-	MFS transporter	NA	NA	NA	NA	NA
QAR21795.1|857887_859276_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
QAR21796.1|859439_860681_-	MFS transporter	NA	NA	NA	NA	NA
QAR21797.1|862343_863207_+	metallophosphoesterase	NA	NA	NA	NA	NA
QAR21798.1|863309_863579_+	30S ribosomal protein S14	NA	NA	NA	NA	NA
QAR21799.1|863747_865058_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
QAR21800.1|865050_865950_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
QAR21801.1|865970_867383_+	C69 family dipeptidase	NA	NA	NA	NA	NA
QAR21802.1|867491_869363_+	potassium transporter	NA	NA	NA	NA	NA
QAR21803.1|869388_869613_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
QAR21804.1|869680_871192_+	glycerol kinase	NA	NA	NA	NA	NA
QAR21805.1|871188_871635_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21806.1|871853_873863_-|portal	portal protein	portal	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	35.7	2.0e-66
>prophage 5
CP035054	Lactobacillus fermentum strain SRCM103285 chromosome, complete genome	2146888	954448	971308	2146888	transposase	Paenibacillus_phage(33.33%)	15	NA	NA
QAR21886.1|954448_955354_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
QAR21887.1|955290_955905_-|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	38.0	7.3e-28
QAR21888.1|957146_957899_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21889.1|957984_959709_+	DUF2075 domain-containing protein	NA	NA	NA	NA	NA
QAR21890.1|960193_961876_+	acetolactate synthase AlsS	NA	NA	NA	NA	NA
QAR21891.1|962061_962499_+|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	69.6	1.2e-48
QAR21892.1|962495_963659_+|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	71.1	5.8e-159
QAR21893.1|963777_964545_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
QAR21894.1|964537_965179_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	30.6	1.6e-17
QAR21895.1|965280_965397_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
QAR21896.1|965884_967105_+|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	45.7	9.0e-94
QAR21897.1|967661_968636_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
QAR21898.1|968971_970321_+	NADH oxidase	NA	NA	NA	NA	NA
QAR22971.1|970447_970654_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QAR21899.1|970735_971308_+|transposase	IS30 family transposase	transposase	H7BW61	unidentified_phage	30.7	5.4e-17
>prophage 6
CP035054	Lactobacillus fermentum strain SRCM103285 chromosome, complete genome	2146888	1003008	1062465	2146888	transposase	Lactobacillus_phage(28.57%)	53	NA	NA
QAR21915.1|1003008_1004172_-|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	71.4	6.9e-160
QAR21916.1|1004945_1006058_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21917.1|1006198_1006471_+	hypothetical protein	NA	NA	NA	NA	NA
QAR22973.1|1006605_1007139_+	phenolic acid decarboxylase	NA	NA	NA	NA	NA
QAR21918.1|1007230_1007773_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
QAR21919.1|1007778_1008216_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	42.2	1.6e-24
QAR21920.1|1008993_1010229_-	DUF2075 domain-containing protein	NA	NA	NA	NA	NA
QAR21921.1|1010388_1012167_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
QAR21922.1|1012483_1013446_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
QAR21923.1|1013720_1015106_+	amino acid permease	NA	NA	NA	NA	NA
QAR21924.1|1015225_1015957_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21925.1|1015956_1017327_+	C69 family dipeptidase	NA	NA	NA	NA	NA
QAR21926.1|1017401_1018289_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA	NA
QAR21927.1|1018379_1019267_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
QAR21928.1|1019653_1022002_+	ATP-binding protein	NA	NA	NA	NA	NA
QAR21929.1|1022140_1022998_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
QAR21930.1|1023197_1024397_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21931.1|1024393_1025446_+	class A beta-lactamase-related serine hydrolase	NA	NA	NA	NA	NA
QAR21932.1|1025458_1025956_+	phosphatidylglycerophosphatase A	NA	A0A291I9Q0	Lactobacillus_phage	54.3	3.1e-45
QAR21933.1|1026149_1026890_-	sulfite exporter TauE/SafE family protein	NA	Q6EVM7	Oenoccocus_phage	39.8	2.5e-46
QAR21934.1|1026969_1028070_-	AI-2E family transporter	NA	NA	NA	NA	NA
QAR21935.1|1028079_1029252_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
QAR21936.1|1029346_1030204_-	patatin family protein	NA	NA	NA	NA	NA
QAR21937.1|1030300_1031236_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	42.6	6.3e-63
QAR21938.1|1031352_1033206_+	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	62.2	5.7e-217
QAR21939.1|1033312_1033897_-	DUF4352 domain-containing protein	NA	A0A0P0IXE0	Lactobacillus_phage	63.2	1.1e-41
QAR21940.1|1034139_1035069_+	EamA family transporter	NA	NA	NA	NA	NA
QAR21941.1|1035129_1035492_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21942.1|1035802_1035985_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21943.1|1037619_1038012_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
QAR21944.1|1038068_1039025_+	WYL domain-containing protein	NA	NA	NA	NA	NA
QAR21945.1|1039215_1040559_-	PFL family protein	NA	NA	NA	NA	NA
QAR21946.1|1040568_1040835_-	ACT domain-containing protein	NA	NA	NA	NA	NA
QAR21947.1|1041176_1042088_+	PLP-dependent cysteine synthase family protein	NA	A0A1X9I5K7	Streptococcus_phage	40.8	7.0e-59
QAR21948.1|1042100_1043243_+	PLP-dependent transferase	NA	NA	NA	NA	NA
QAR21949.1|1043364_1044528_-|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	71.7	1.4e-160
QAR21950.1|1044524_1044962_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	70.3	7.0e-49
QAR22974.1|1045858_1046473_-|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	37.5	5.6e-28
QAR21951.1|1046885_1048079_-	MFS transporter	NA	NA	NA	NA	NA
QAR21952.1|1048126_1049551_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	32.7	3.6e-70
QAR21953.1|1049560_1050382_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
QAR21954.1|1050416_1050797_+	PaaI family thioesterase	NA	NA	NA	NA	NA
QAR21955.1|1050843_1051071_+	triphosphoribosyl-dephospho-CoA synthase	NA	NA	NA	NA	NA
QAR22975.1|1051145_1051394_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21956.1|1052039_1053380_+	MFS transporter	NA	NA	NA	NA	NA
QAR21957.1|1053392_1054439_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
QAR21958.1|1054438_1055836_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
QAR21959.1|1055840_1056425_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
QAR21960.1|1056445_1057219_+	translation factor (SUA5)	NA	NA	NA	NA	NA
QAR21961.1|1058208_1058382_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21962.1|1058400_1058625_+	hypothetical protein	NA	NA	NA	NA	NA
QAR21963.1|1060613_1061537_+|transposase	IS30 family transposase	transposase	H7BVY4	unidentified_phage	31.0	4.8e-31
QAR21964.1|1061586_1062465_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	36.4	2.0e-42
>prophage 7
CP035054	Lactobacillus fermentum strain SRCM103285 chromosome, complete genome	2146888	1246536	1376855	2146888	transposase,tRNA,protease	Streptococcus_phage(18.52%)	117	NA	NA
QAR22129.1|1246536_1246845_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QAR22130.1|1247045_1247567_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA	NA
QAR22131.1|1247579_1248428_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QAR22132.1|1248961_1249501_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA	NA
QAR22133.1|1249675_1250356_+	DUF554 domain-containing protein	NA	NA	NA	NA	NA
QAR22134.1|1250356_1250968_+	cadmium transporter	NA	NA	NA	NA	NA
QAR22135.1|1251305_1252556_-|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	37.0	3.4e-56
QAR22136.1|1252634_1253087_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	51.5	4.7e-32
QAR22137.1|1253376_1254549_-	cysteine desulfurase	NA	NA	NA	NA	NA
QAR22138.1|1255491_1256055_+	response regulator transcription factor	NA	NA	NA	NA	NA
QAR22139.1|1256047_1257082_+	HAMP domain-containing histidine kinase	NA	A0A1B0VMK3	Pseudomonas_phage	26.0	4.1e-07
QAR22140.1|1257142_1257628_+	flavodoxin	NA	NA	NA	NA	NA
QAR22141.1|1258037_1259096_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.9	4.5e-41
QAR22142.1|1259095_1259704_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	39.1	4.7e-27
QAR22143.1|1259690_1260884_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	48.6	5.0e-97
QAR22144.1|1260876_1261347_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	43.4	2.0e-25
QAR22145.1|1261507_1261963_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
QAR22146.1|1262000_1263752_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22147.1|1263891_1265067_-	3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	41.2	1.1e-88
QAR22148.1|1265078_1266152_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	48.2	5.3e-90
QAR22149.1|1266410_1267430_-	aldo/keto reductase	NA	NA	NA	NA	NA
QAR22150.1|1267524_1268148_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
QAR22151.1|1268183_1268687_+	hypothetical protein	NA	NA	NA	NA	NA
QAR22152.1|1269199_1271032_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	26.1	2.5e-23
QAR22153.1|1271099_1272185_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	23.5	7.6e-12
QAR22154.1|1272197_1272518_-	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA	NA
QAR22155.1|1272519_1272837_-	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA	NA
QAR22156.1|1272806_1273592_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA	NA
QAR22157.1|1273581_1274307_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA	NA
QAR22158.1|1274303_1274912_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
QAR22159.1|1274911_1275496_-	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA	NA
QAR22160.1|1275497_1276781_-	histidinol dehydrogenase	NA	NA	NA	NA	NA
QAR22161.1|1276782_1277397_-	ATP phosphoribosyltransferase	NA	NA	NA	NA	NA
QAR22162.1|1277389_1278550_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
QAR22163.1|1278872_1279712_-	histidinol-phosphatase HisJ	NA	NA	NA	NA	NA
QAR22164.1|1280699_1281248_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
QAR22165.1|1281653_1282814_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	27.0	4.8e-20
QAR22166.1|1282925_1284782_-	molecular chaperone DnaK	NA	A0A2P1EIW2	Megavirus	45.4	3.2e-135
QAR22167.1|1284819_1285407_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
QAR22168.1|1285417_1286464_-	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
QAR22169.1|1286589_1286955_+	hypothetical protein	NA	NA	NA	NA	NA
QAR22170.1|1287740_1290008_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	30.7	1.4e-124
QAR22981.1|1290070_1290190_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22171.1|1290246_1291125_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	36.4	9.8e-42
QAR22172.1|1291148_1291436_-|transposase	transposase	transposase	NA	NA	NA	NA
QAR22173.1|1291701_1293102_+	amino acid permease	NA	NA	NA	NA	NA
QAR22174.1|1293391_1294720_+	D-serine ammonia-lyase	NA	NA	NA	NA	NA
QAR22175.1|1294894_1295506_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
QAR22176.1|1295518_1295872_+	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
QAR22177.1|1296262_1297228_-	ketopantoate reductase family protein	NA	NA	NA	NA	NA
QAR22178.1|1298878_1300051_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
QAR22179.1|1300203_1300521_-	acetyl-CoA carboxylase	NA	NA	NA	NA	NA
QAR22180.1|1300501_1301146_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22181.1|1301949_1302936_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
QAR22182.1|1303093_1304788_+	alpha-glucosidase	NA	NA	NA	NA	NA
QAR22183.1|1304814_1306152_+	MFS transporter	NA	NA	NA	NA	NA
QAR22982.1|1307384_1308071_-|transposase	transposase	transposase	NA	NA	NA	NA
QAR22184.1|1308189_1309578_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
QAR22185.1|1309692_1310658_-	riboflavin biosynthesis protein RibF	NA	NA	NA	NA	NA
QAR22186.1|1310668_1311565_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
QAR22187.1|1311634_1311997_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
QAR22188.1|1312009_1314337_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.6	4.3e-20
QAR22189.1|1314341_1314665_-	YlxQ-related RNA-binding protein	NA	NA	NA	NA	NA
QAR22190.1|1314657_1314960_-	YlxR family protein	NA	NA	NA	NA	NA
QAR22191.1|1314996_1316223_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
QAR22192.1|1316242_1316722_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
QAR22193.1|1316874_1317054_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22194.1|1317136_1319962_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
QAR22195.1|1319954_1321025_-	carbamoyl phosphate synthase small subunit	NA	NA	NA	NA	NA
QAR22196.1|1321269_1322295_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
QAR22197.1|1322321_1323524_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
QAR22198.1|1323533_1324280_+	acetylglutamate kinase	NA	NA	NA	NA	NA
QAR22199.1|1324292_1325444_+	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.0	5.6e-21
QAR22200.1|1325566_1329910_-	PolC-type DNA polymerase III	NA	A0A0K2SUJ2	Clostridium_phage	35.3	1.7e-14
QAR22201.1|1330049_1331771_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	25.3	1.8e-07
QAR22202.1|1331804_1333076_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
QAR22203.1|1333097_1333886_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
QAR22204.1|1333902_1334676_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	34.6	8.7e-18
QAR22205.1|1334802_1335366_-	ribosome recycling factor	NA	NA	NA	NA	NA
QAR22206.1|1335362_1336088_-	UMP kinase	NA	NA	NA	NA	NA
QAR22207.1|1336168_1337047_-	elongation factor Ts	NA	NA	NA	NA	NA
QAR22208.1|1337137_1337917_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
QAR22209.1|1338070_1338361_-	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
QAR22210.1|1338353_1339106_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
QAR22211.1|1339201_1339834_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
QAR22212.1|1339901_1340129_-	YneF family protein	NA	NA	NA	NA	NA
QAR22213.1|1340205_1340457_-	DUF896 domain-containing protein	NA	NA	NA	NA	NA
QAR22214.1|1340612_1341239_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	52.9	6.6e-16
QAR22215.1|1341468_1342638_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
QAR22216.1|1342890_1343697_+	(Fe-S)-binding protein	NA	NA	NA	NA	NA
QAR22217.1|1343697_1345215_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
QAR22218.1|1345207_1345942_+	lactate utilization protein C	NA	NA	NA	NA	NA
QAR22219.1|1346309_1347320_-	mucin-binding protein	NA	NA	NA	NA	NA
QAR22220.1|1348492_1349041_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22221.1|1349181_1350261_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22222.1|1350232_1350670_-	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
QAR22223.1|1351141_1351456_-	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
QAR22224.1|1351452_1352340_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA	NA
QAR22225.1|1352340_1353021_-	serine dehydratase	NA	NA	NA	NA	NA
QAR22226.1|1353245_1353503_+	hypothetical protein	NA	NA	NA	NA	NA
QAR22227.1|1355570_1356185_+|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	38.0	1.2e-27
QAR22228.1|1357230_1358154_-|transposase	IS30 family transposase	transposase	H7BVY4	unidentified_phage	31.6	7.4e-32
QAR22229.1|1358226_1359531_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
QAR22230.1|1359704_1361471_-	alpha-glycosidase	NA	NA	NA	NA	NA
QAR22231.1|1361470_1362817_-	MFS transporter	NA	NA	NA	NA	NA
QAR22232.1|1363192_1363882_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	50.9	1.8e-59
QAR22233.1|1363971_1365306_+	APC family permease	NA	NA	NA	NA	NA
QAR22234.1|1365327_1366551_-	DUF389 domain-containing protein	NA	NA	NA	NA	NA
QAR22235.1|1366679_1367000_+	hypothetical protein	NA	NA	NA	NA	NA
QAR22236.1|1367174_1367537_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22237.1|1368059_1368635_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QAR22238.1|1368757_1369681_-|transposase	IS30 family transposase	transposase	H7BVY4	unidentified_phage	31.6	7.4e-32
QAR22239.1|1369698_1369896_+	hypothetical protein	NA	NA	NA	NA	NA
QAR22240.1|1369910_1371131_-|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.2	6.2e-95
QAR22241.1|1371227_1372826_-	APC family permease	NA	NA	NA	NA	NA
QAR22242.1|1374996_1375284_-|transposase	transposase	transposase	NA	NA	NA	NA
QAR22243.1|1375931_1376855_+|transposase	IS30 family transposase	transposase	H7BVY4	unidentified_phage	32.1	1.4e-30
>prophage 8
CP035054	Lactobacillus fermentum strain SRCM103285 chromosome, complete genome	2146888	1468835	1531638	2146888	terminase,tRNA,portal,tail,capsid	Lactobacillus_phage(78.95%)	69	NA	NA
QAR22333.1|1468835_1469342_-|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
QAR22334.1|1469513_1470368_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
QAR22335.1|1470479_1471508_+	lactonase family protein	NA	NA	NA	NA	NA
QAR22336.1|1471564_1472455_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
QAR22337.1|1472454_1473264_-	NAD kinase	NA	NA	NA	NA	NA
QAR22338.1|1473278_1473959_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
QAR22339.1|1474121_1474748_+	dithiol-disulfide isomerase	NA	NA	NA	NA	NA
QAR22340.1|1475078_1476101_-	competence protein	NA	NA	NA	NA	NA
QAR22341.1|1476153_1476867_-	competence protein	NA	NA	NA	NA	NA
QAR22342.1|1477003_1477408_-	transcriptional regulator Spx	NA	NA	NA	NA	NA
QAR22343.1|1477734_1478229_+	hypothetical protein	NA	NA	NA	NA	NA
QAR22344.1|1485536_1486187_+	cytochrome O ubiquinol oxidase	NA	NA	NA	NA	NA
QAR22345.1|1486127_1486808_-	TIGR01906 family membrane protein	NA	NA	NA	NA	NA
QAR22346.1|1486788_1487571_-	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA	NA
QAR22347.1|1487570_1488107_-	DUF1027 domain-containing protein	NA	NA	NA	NA	NA
QAR22348.1|1488812_1490009_-	acetate kinase	NA	NA	NA	NA	NA
QAR22349.1|1491317_1491761_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22350.1|1491757_1492054_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22351.1|1492013_1492499_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
QAR22352.1|1492476_1492755_-	competence protein ComGC	NA	NA	NA	NA	NA
QAR22353.1|1492832_1493369_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22354.1|1493405_1493594_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22355.1|1493614_1493908_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22356.1|1494071_1494491_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22357.1|1494504_1495113_-	hypothetical protein	NA	U3PFR8	Lactobacillus_phage	40.5	1.3e-21
QAR22358.1|1495131_1495530_-	hypothetical protein	NA	B4XYR0	Lactobacillus_phage	41.0	4.2e-16
QAR22359.1|1495671_1496925_-	LysM peptidoglycan-binding domain-containing protein	NA	A5A5E0	Lactobacillus_phage	89.2	2.5e-208
QAR22360.1|1496927_1497392_-	oxidoreductase	NA	A6N8M1	Lactobacillus_phage	87.7	1.6e-64
QAR22361.1|1497445_1497766_-	hypothetical protein	NA	D2KRC5	Lactobacillus_phage	78.3	2.8e-39
QAR22362.1|1497784_1498489_-	hypothetical protein	NA	E9LUK0	Lactobacillus_phage	69.0	9.2e-75
QAR22363.1|1498500_1499625_-	DUF2479 domain-containing protein	NA	D2KRC4	Lactobacillus_phage	77.5	1.4e-146
QAR22364.1|1499637_1500006_-	hypothetical protein	NA	E9LUJ8	Lactobacillus_phage	79.7	1.0e-48
QAR22365.1|1499984_1500704_-	SGNH/GDSL hydrolase family protein	NA	D2KRC2	Lactobacillus_phage	92.0	1.9e-107
QAR22366.1|1500716_1500968_-	hypothetical protein	NA	E9LUJ7	Lactobacillus_phage	89.2	4.4e-32
QAR22367.1|1500970_1501162_-	hypothetical protein	NA	E9LUJ6	Lactobacillus_phage	82.0	3.2e-14
QAR22368.1|1504803_1506393_-	hypothetical protein	NA	D2KRB9	Lactobacillus_phage	86.6	9.1e-272
QAR22369.1|1506404_1507220_-|tail	phage tail family protein	tail	D2KRB8	Lactobacillus_phage	89.7	4.8e-136
QAR22370.1|1507219_1510825_-	hypothetical protein	NA	D2KRB7	Lactobacillus_phage	77.5	1.5e-242
QAR22371.1|1510839_1511436_-	hypothetical protein	NA	O03936	Lactobacillus_phage	49.0	3.5e-43
QAR22372.1|1511440_1511878_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22373.1|1511952_1512549_-|capsid	capsid protein	capsid	NA	NA	NA	NA
QAR22374.1|1512564_1512960_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22375.1|1512946_1513312_-|capsid	capsid protein	capsid	O03933	Lactobacillus_phage	47.4	2.6e-20
QAR22376.1|1513311_1513659_-|capsid	capsid protein	capsid	O03932	Lactobacillus_phage	50.4	3.9e-26
QAR22377.1|1513660_1514041_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22378.1|1514054_1514897_-|capsid	N4-gp56 family major capsid protein	capsid	A8ASJ6	Listeria_phage	57.0	9.6e-79
QAR22379.1|1514909_1515536_-	scaffolding protein	NA	I1TLE1	Bacillus_phage	35.0	1.2e-14
QAR22380.1|1515636_1516794_-|capsid	capsid protein	capsid	O03929	Lactobacillus_phage	46.7	4.1e-80
QAR22381.1|1516796_1518290_-|portal	phage portal protein	portal	Q38341	Lactococcus_phage	57.9	9.7e-159
QAR22985.1|1518351_1519647_-|terminase	PBSX family phage terminase large subunit	terminase	A4L7R3	Lactococcus_phage	66.2	1.2e-173
QAR22382.1|1519648_1520149_-|terminase	terminase small subunit	terminase	D2KRB6	Lactobacillus_phage	87.0	2.7e-73
QAR22383.1|1520688_1521156_-	hypothetical protein	NA	D2KRB5	Lactobacillus_phage	96.6	8.5e-61
QAR22384.1|1521271_1521724_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22385.1|1521817_1522207_-	hypothetical protein	NA	A0A0Y0AFD7	Bacillus_phage	39.8	2.4e-16
QAR22386.1|1522203_1522626_-	RusA family crossover junction endodeoxyribonuclease	NA	E9LUN0	Lactobacillus_phage	82.7	1.0e-41
QAR22387.1|1522636_1523068_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22388.1|1523125_1523395_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22389.1|1523678_1524482_-	ATP-binding protein	NA	D2KRE5	Lactobacillus_phage	95.5	9.0e-143
QAR22390.1|1524491_1524827_-	hypothetical protein	NA	D2KRE4	Lactobacillus_phage	85.9	7.7e-40
QAR22391.1|1524781_1525270_-	hypothetical protein	NA	Q8SDH3	Lactococcus_phage	57.9	4.8e-30
QAR22392.1|1525283_1525886_-	DUF669 domain-containing protein	NA	D2KRE3	Lactobacillus_phage	36.9	6.3e-24
QAR22393.1|1525888_1526533_-	nucleotide-binding protein	NA	D2KRE2	Lactobacillus_phage	77.6	4.7e-94
QAR22394.1|1526532_1527096_-	hypothetical protein	NA	D2KRE1	Lactobacillus_phage	92.5	2.3e-92
QAR22395.1|1527098_1527341_-	hypothetical protein	NA	D2KRE0	Lactobacillus_phage	65.6	1.6e-15
QAR22396.1|1527656_1528412_-	phage regulatory protein	NA	D2KRD8	Lactobacillus_phage	88.0	7.4e-123
QAR22397.1|1528423_1528660_-	XRE family transcriptional regulator	NA	O21995	Streptococcus_virus	48.5	2.6e-10
QAR22398.1|1528823_1529441_+	XRE family transcriptional regulator	NA	A0A1B2APZ3	Phage_Wrath	46.8	2.2e-40
QAR22399.1|1529572_1530100_+	hypothetical protein	NA	E9LUL0	Lactobacillus_phage	98.4	1.5e-29
QAR22400.1|1530210_1531638_+	recombinase family protein	NA	D2KRD2	Lactobacillus_phage	95.5	2.0e-222
>prophage 9
CP035054	Lactobacillus fermentum strain SRCM103285 chromosome, complete genome	2146888	1554063	1639679	2146888	integrase,terminase,tRNA,portal,head,capsid,tail,protease	Lactobacillus_phage(70.21%)	82	1599492:1599526	1639749:1639783
QAR22423.1|1554063_1556712_-|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	31.5	3.2e-64
QAR22424.1|1556964_1558347_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	31.1	1.1e-47
QAR22425.1|1558346_1559306_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
QAR22426.1|1559531_1559954_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
QAR22427.1|1560024_1560954_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22428.1|1560955_1561975_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	29.9	5.3e-07
QAR22429.1|1561985_1562588_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
QAR22430.1|1562641_1564585_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.5	3.4e-63
QAR22431.1|1564601_1567244_-	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	25.0	1.4e-35
QAR22432.1|1567337_1568897_-	ribonuclease Y	NA	NA	NA	NA	NA
QAR22433.1|1569291_1570353_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	63.4	8.0e-123
QAR22434.1|1570446_1571691_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
QAR22435.1|1571767_1572352_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
QAR22436.1|1572367_1573372_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QAR22437.1|1573468_1574770_-	insulinase family protein	NA	NA	NA	NA	NA
QAR22438.1|1574756_1576031_-	insulinase family protein	NA	NA	NA	NA	NA
QAR22439.1|1576286_1577144_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QAR22440.1|1577159_1577804_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.8	6.7e-32
QAR22441.1|1577818_1578466_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
QAR22442.1|1578942_1579476_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
QAR22443.1|1579491_1580343_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
QAR22444.1|1580461_1581472_-	rod shape-determining protein	NA	NA	NA	NA	NA
QAR22445.1|1581634_1582261_-	DNA repair protein RadC	NA	NA	NA	NA	NA
QAR22446.1|1582313_1583636_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
QAR22447.1|1583744_1586399_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	42.4	1.3e-158
QAR22448.1|1586705_1587200_-	thiol peroxidase	NA	NA	NA	NA	NA
QAR22449.1|1587351_1587963_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22450.1|1588641_1589250_-	DUF2892 domain-containing protein	NA	NA	NA	NA	NA
QAR22451.1|1589285_1589717_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22452.1|1591461_1592604_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	37.1	1.3e-38
QAR22453.1|1592616_1593912_-	GntP family permease	NA	NA	NA	NA	NA
QAR22454.1|1594300_1595521_-|tRNA	tRNA 4-thiouridine(8) synthase ThiI	tRNA	NA	NA	NA	NA
QAR22455.1|1595533_1596682_-	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	30.3	2.0e-31
QAR22456.1|1596862_1598572_-	septation ring formation regulator EzrA	NA	NA	NA	NA	NA
QAR22457.1|1598901_1599507_+	30S ribosomal protein S4	NA	NA	NA	NA	NA
1599492:1599526	attL	ATTCTACAACAAGTAATCTCGGTTACTTGTTAAAA	NA	NA	NA	NA
QAR22458.1|1600018_1600525_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22459.1|1600511_1600703_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22460.1|1601321_1602563_-	LysM peptidoglycan-binding domain-containing protein	NA	A5A5E0	Lactobacillus_phage	60.1	2.6e-109
QAR22461.1|1602799_1603123_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22462.1|1603255_1605616_-	DUF2479 domain-containing protein	NA	O03968	Lactobacillus_phage	64.2	1.2e-54
QAR22463.1|1605615_1605978_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22464.1|1605940_1606453_-	hypothetical protein	NA	E9LUJ5	Lactobacillus_phage	64.3	9.8e-18
QAR22465.1|1606457_1608542_-	hypothetical protein	NA	E9LUJ4	Lactobacillus_phage	84.0	0.0e+00
QAR22466.1|1608554_1609406_-|tail	phage tail family protein	tail	E9LUJ3	Lactobacillus_phage	81.9	7.1e-130
QAR22467.1|1609413_1613706_-|tail	phage tail tape measure protein	tail	E9LUJ2	Lactobacillus_phage	97.1	0.0e+00
QAR22468.1|1613904_1614249_-	hypothetical protein	NA	E9LUJ0	Lactobacillus_phage	94.7	9.4e-57
QAR22469.1|1614313_1614925_-|tail	phage tail protein	tail	E9LUI9	Lactobacillus_phage	95.6	1.3e-106
QAR22470.1|1614930_1615344_-	hypothetical protein	NA	D2KRB3	Lactobacillus_phage	99.3	3.8e-73
QAR22471.1|1615340_1615724_-	HK97 gp10 family phage protein	NA	D2KRB2	Lactobacillus_phage	100.0	2.1e-65
QAR22472.1|1615707_1616055_-|head,tail	head-tail adaptor protein	head,tail	E9LUI6	Lactobacillus_phage	97.4	7.0e-60
QAR22473.1|1616041_1616350_-|head,tail	phage gp6-like head-tail connector protein	head,tail	D2KRB0	Lactobacillus_phage	96.1	6.9e-51
QAR22987.1|1616360_1616501_-	hypothetical protein	NA	L0P8M2	Lactobacillus_phage	60.5	4.4e-05
QAR22474.1|1616497_1617619_-|capsid	phage major capsid protein	capsid	D2KRA9	Lactobacillus_phage	99.5	4.0e-205
QAR22475.1|1617636_1618275_-|head,protease	HK97 family phage prohead protease	head,protease	D2KRA8	Lactobacillus_phage	98.8	1.0e-88
QAR22476.1|1618207_1619473_-|portal	phage portal protein	portal	D2KRA7	Lactobacillus_phage	99.5	9.5e-240
QAR22477.1|1619652_1621362_-|terminase	terminase large subunit	terminase	E9LUI0	Lactobacillus_phage	98.6	0.0e+00
QAR22478.1|1621358_1621814_-|terminase	terminase	terminase	E9LUH9	Lactobacillus_phage	96.7	1.7e-77
QAR22479.1|1621985_1622771_-	HNH endonuclease	NA	E9LUN5	Lactobacillus_phage	95.0	1.3e-149
QAR22480.1|1623033_1623606_-	hypothetical protein	NA	D2IYV7	Enterococcus_phage	31.4	1.5e-22
QAR22481.1|1623791_1624232_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22482.1|1624215_1624692_-	DUF4065 domain-containing protein	NA	Q9AZG0	Lactococcus_phage	42.8	3.7e-27
QAR22483.1|1625204_1625663_-	hypothetical protein	NA	A0A0A1EL23	Lactobacillus_phage	69.1	2.8e-56
QAR22484.1|1625668_1626118_-	hypothetical protein	NA	A0A0A1ERD2	Lactobacillus_phage	61.1	6.3e-45
QAR22485.1|1626195_1626456_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22486.1|1626486_1626924_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22487.1|1627059_1627404_-	VRR-NUC domain-containing protein	NA	A0A0A1ENT6	Lactobacillus_phage	67.9	2.5e-41
QAR22488.1|1627686_1629996_-	DNA primase	NA	A0A0P0IX98	Lactobacillus_phage	55.9	2.7e-256
QAR22489.1|1630061_1630622_-	DUF669 domain-containing protein	NA	Q9T0Y2	Lactobacillus_phage	50.0	1.1e-46
QAR22988.1|1630641_1631988_-	DEAD/DEAH box helicase	NA	Q9T0Y3	Lactobacillus_phage	59.3	2.4e-148
QAR22490.1|1631980_1632661_-	DNA-binding protein	NA	A0A286QSE8	Streptococcus_phage	57.6	5.4e-72
QAR22491.1|1632685_1633171_-	siphovirus Gp157 family protein	NA	A0A0A1EL06	Lactobacillus_phage	43.3	1.1e-26
QAR22492.1|1633173_1633374_-	hypothetical protein	NA	D2KRE0	Lactobacillus_phage	78.8	1.8e-20
QAR22493.1|1633586_1633907_-	hypothetical protein	NA	B8R678	Lactobacillus_phage	38.5	4.8e-07
QAR22494.1|1633919_1634156_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QAR22495.1|1634286_1634628_+	XRE family transcriptional regulator	NA	B8R672	Lactobacillus_phage	49.3	2.9e-10
QAR22496.1|1634620_1635007_+	ImmA/IrrE family metallo-endopeptidase	NA	D6PSS8	Lactobacillus_phage	36.5	1.5e-15
QAR22497.1|1635059_1635704_+	hypothetical protein	NA	NA	NA	NA	NA
QAR22498.1|1635733_1636015_+	hypothetical protein	NA	D2KRD5	Lactobacillus_phage	72.7	2.9e-32
QAR22499.1|1636011_1636746_+	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	47.6	7.7e-32
QAR22500.1|1636850_1637378_+	hypothetical protein	NA	NA	NA	NA	NA
QAR22501.1|1637411_1638332_+	hypothetical protein	NA	A1KWY5	Staphylococcus_virus	28.3	9.0e-30
QAR22502.1|1638557_1639679_+|integrase	site-specific integrase	integrase	E9LUK6	Lactobacillus_phage	45.6	4.1e-85
1639749:1639783	attR	ATTCTACAACAAGTAATCTCGGTTACTTGTTAAAA	NA	NA	NA	NA
>prophage 10
CP035054	Lactobacillus fermentum strain SRCM103285 chromosome, complete genome	2146888	1684521	1740579	2146888	transposase,tRNA,protease	Streptococcus_phage(28.57%)	52	NA	NA
QAR22550.1|1684521_1685223_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
QAR22551.1|1685240_1685723_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QAR22990.1|1685883_1686081_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22552.1|1686087_1687440_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
QAR22553.1|1687577_1689242_-	thioredoxin reductase	NA	A0A2I2L5E1	Orpheovirus	37.8	1.9e-46
QAR22554.1|1689257_1689821_-	peroxiredoxin	NA	NA	NA	NA	NA
QAR22555.1|1690230_1691172_-|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	42.3	1.4e-33
QAR22556.1|1691725_1692586_-	sugar transporter	NA	NA	NA	NA	NA
QAR22557.1|1692788_1694291_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	34.6	5.2e-35
QAR22991.1|1694290_1695013_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.4	1.5e-35
QAR22558.1|1695629_1695980_-	DUF956 family protein	NA	NA	NA	NA	NA
QAR22559.1|1695980_1696901_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
QAR22560.1|1696929_1697733_-	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA	NA
QAR22561.1|1697752_1698736_-	PTS mannose transporter subunit IIAB	NA	NA	NA	NA	NA
QAR22562.1|1699210_1700152_+	Dyp-type peroxidase	NA	NA	NA	NA	NA
QAR22563.1|1700386_1700902_-	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
QAR22564.1|1701064_1701904_+	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	40.1	1.8e-48
QAR22565.1|1701990_1702953_+	mannose-6-phosphate isomerase, class I	NA	NA	NA	NA	NA
QAR22566.1|1703049_1703955_-	LysR family transcriptional regulator	NA	A0A2H4J8I9	uncultured_Caudovirales_phage	41.2	7.5e-05
QAR22567.1|1704075_1705104_+	putative sulfate exporter family transporter	NA	NA	NA	NA	NA
QAR22568.1|1705500_1706130_-	LysM domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	52.3	7.3e-23
QAR22569.1|1706435_1707263_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
QAR22570.1|1707284_1709135_-	acetyltransferase	NA	C6ZR20	Salmonella_phage	25.5	4.6e-25
QAR22571.1|1709144_1709456_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22572.1|1709736_1711557_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1HVL7	Paramecium_bursaria_Chlorella_virus	35.5	2.6e-89
QAR22573.1|1711770_1713129_-	phosphoglucosamine mutase	NA	A0A127AWJ1	Bacillus_phage	26.9	3.6e-19
QAR22574.1|1713168_1714047_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22992.1|1714036_1714879_-	TIGR00159 family protein	NA	NA	NA	NA	NA
QAR22575.1|1714893_1715790_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
QAR22576.1|1715917_1716457_+	exonuclease	NA	M1PFD8	Streptococcus_phage	35.6	2.0e-21
QAR22577.1|1716586_1717102_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QAR22578.1|1717101_1717554_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
QAR22579.1|1717562_1718537_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
QAR22580.1|1718570_1719260_-	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	45.1	6.7e-46
QAR22581.1|1719397_1719982_+	hypothetical protein	NA	NA	NA	NA	NA
QAR22582.1|1720009_1720483_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	56.8	4.0e-42
QAR22583.1|1720503_1722897_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.1	2.2e-88
QAR22993.1|1722949_1723174_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
QAR22584.1|1723251_1724802_-	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA	NA
QAR22585.1|1724892_1726287_-	amino acid permease	NA	NA	NA	NA	NA
QAR22586.1|1726480_1727803_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	70.3	2.0e-171
QAR22587.1|1727919_1728687_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
QAR22588.1|1728792_1729998_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
QAR22589.1|1730079_1731093_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
QAR22590.1|1732798_1733389_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	56.8	3.6e-56
QAR22591.1|1733454_1734741_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
QAR22592.1|1735014_1735467_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	51.5	2.8e-32
QAR22593.1|1735545_1736796_+|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	37.0	2.0e-56
QAR22594.1|1736986_1737634_+	thiaminase II	NA	NA	NA	NA	NA
QAR22595.1|1737754_1738693_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	36.8	2.3e-49
QAR22596.1|1738710_1739688_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	54.0	2.7e-93
QAR22597.1|1739709_1740579_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	30.8	8.3e-09
>prophage 11
CP035054	Lactobacillus fermentum strain SRCM103285 chromosome, complete genome	2146888	1877665	1942954	2146888	transposase,tRNA,protease	Lactobacillus_phage(15.79%)	58	NA	NA
QAR22715.1|1877665_1879159_-|tRNA	lysine--tRNA ligase	tRNA	A0A2K9L3L6	Tupanvirus	41.4	1.6e-89
QAR22716.1|1879174_1880176_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
QAR22717.1|1880264_1881146_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
QAR22718.1|1881222_1883391_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	A0A0P0CCN8	Ostreococcus_mediterraneus_virus	48.8	5.6e-107
QAR22719.1|1883474_1884023_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	31.1	8.0e-10
QAR22720.1|1884039_1885389_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A0N7G7K4	Chrysochromulina_ericina_virus	24.4	8.9e-10
QAR22721.1|1885388_1885895_-	RNA-binding protein S1	NA	NA	NA	NA	NA
QAR22722.1|1886023_1886380_-	septum formation initiator family protein	NA	NA	NA	NA	NA
QAR22723.1|1886468_1886741_-	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
QAR22724.1|1886737_1890280_-	transcription-repair coupling factor	NA	NA	NA	NA	NA
QAR22725.1|1890297_1890858_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
QAR22726.1|1891045_1891681_+	CBS domain-containing protein	NA	NA	NA	NA	NA
QAR22727.1|1891813_1892167_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A2K9VCH5	Lactobacillus_phage	38.5	2.3e-10
QAR22728.1|1892178_1893300_-	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	28.9	3.2e-29
QAR22729.1|1893302_1893662_-	holo-ACP synthase	NA	NA	NA	NA	NA
QAR22730.1|1893665_1895144_-	DEAD/DEAH box helicase	NA	A0A1V0SBR7	Catovirus	37.8	9.6e-66
QAR22731.1|1895314_1896694_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
QAR22732.1|1896868_1897768_-|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
QAR22733.1|1897778_1898336_-	LemA family protein	NA	NA	NA	NA	NA
QAR22734.1|1898472_1898937_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
QAR22735.1|1899019_1899724_-	class A sortase	NA	NA	NA	NA	NA
QAR22736.1|1900454_1900700_-	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
QAR22737.1|1900794_1902063_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
QAR22738.1|1902273_1903875_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.3	4.6e-146
QAR22739.1|1904041_1904629_-	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
QAR22740.1|1904674_1905100_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
QAR22741.1|1905214_1906570_+	HD domain-containing protein	NA	A0A291ATA1	Pandoravirus	32.1	1.4e-26
QAR22742.1|1906581_1907403_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
QAR22743.1|1907579_1908308_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22744.1|1908417_1909404_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	33.6	8.4e-42
QAR22745.1|1909479_1910847_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0N7G7P8	Chrysochromulina_ericina_virus	34.4	3.4e-33
QAR22746.1|1910862_1911699_-	pur operon repressor	NA	NA	NA	NA	NA
QAR22747.1|1911923_1912718_-	metal ABC transporter permease	NA	NA	NA	NA	NA
QAR22748.1|1912717_1913329_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	28.3	1.3e-13
QAR22749.1|1913385_1914291_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QAR22750.1|1914468_1915320_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
QAR22751.1|1915599_1916487_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
QAR22752.1|1916479_1917049_-	ribonuclease M5	NA	NA	NA	NA	NA
QAR22753.1|1917035_1917824_-	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
QAR22754.1|1917827_1919906_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	36.2	3.3e-88
QAR22755.1|1919928_1920771_-	DUF72 domain-containing protein	NA	NA	NA	NA	NA
QAR22756.1|1920826_1922002_-	MFS transporter	NA	NA	NA	NA	NA
QAR22757.1|1922167_1922866_-	NAD-dependent protein deacylase	NA	A0A068EPD4	Bacillus_phage	31.7	1.4e-19
QAR22758.1|1922868_1923852_-	IpaB/EvcA family protein	NA	NA	NA	NA	NA
QAR22759.1|1923832_1925110_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA	NA
QAR22760.1|1925102_1926041_-	Ppx/GppA family phosphatase	NA	NA	NA	NA	NA
QAR22761.1|1926241_1928563_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
QAR22762.1|1928605_1929769_-	cation:proton antiporter	NA	NA	NA	NA	NA
QAR22763.1|1929911_1930760_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QAR22764.1|1931436_1932201_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
QAR22765.1|1932268_1932814_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22766.1|1933290_1933755_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAR22767.1|1935199_1936450_-|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	37.3	6.9e-57
QAR22768.1|1936523_1936979_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	50.7	1.2e-32
QAR22769.1|1937153_1939679_+	M1 family peptidase	NA	A0A0P0IY26	Acinetobacter_phage	26.7	2.4e-69
QAR22770.1|1939890_1940931_-	Zn-dependent alcohol dehydrogenase	NA	NA	NA	NA	NA
QAR22771.1|1941174_1942425_-|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	36.8	7.6e-56
QAR22772.1|1942498_1942954_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	54.3	4.3e-33
>prophage 12
CP035054	Lactobacillus fermentum strain SRCM103285 chromosome, complete genome	2146888	1974736	2036273	2146888	transposase	Lactobacillus_phage(15.79%)	52	NA	NA
QAR22801.1|1974736_1975987_-|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	37.3	1.4e-57
QAR22802.1|1976060_1976516_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	50.0	2.8e-32
QAR22803.1|1982182_1982659_+	nucleoside 2-deoxyribosyltransferase	NA	A0A2P0ZL88	Lactobacillus_phage	35.2	7.7e-17
QAR22804.1|1982703_1983138_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22805.1|1983249_1985181_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	37.6	4.6e-92
QAR22806.1|1985180_1985489_-	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
QAR22807.1|1985502_1985874_-	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
QAR22808.1|1986119_1987124_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22809.1|1987236_1988415_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
QAR22810.1|1988539_1989235_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
QAR22811.1|1989474_1990728_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
QAR22812.1|1991001_1992537_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	46.2	5.8e-74
QAR22813.1|1992538_1993120_-	phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
QAR22814.1|1993128_1994166_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	M4QRQ6	Synechococcus_phage	39.8	9.4e-60
QAR22815.1|1994165_1995629_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.9e-61
QAR22816.1|1995604_1997830_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.5	1.8e-145
QAR22817.1|1997833_1998514_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
QAR22818.1|1998514_1998757_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
QAR22819.1|1998759_1999482_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D7SPE1	Cyanophage	36.4	1.2e-34
QAR22820.1|1999855_2000095_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22821.1|2000376_2001087_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
QAR22822.1|2001262_2002813_-	zinc-ribbon domain-containing protein	NA	NA	NA	NA	NA
QAR22823.1|2002824_2003841_-	zinc-ribbon domain-containing protein	NA	NA	NA	NA	NA
QAR22824.1|2004204_2005500_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.1	2.2e-21
QAR22825.1|2005518_2006658_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
QAR22826.1|2006641_2007127_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.2	2.4e-21
QAR22827.1|2007413_2009075_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
QAR22828.1|2009162_2010203_-	AI-2E family transporter	NA	NA	NA	NA	NA
QAR22829.1|2010231_2010411_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22830.1|2010531_2010987_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	50.0	2.8e-32
QAR22831.1|2011060_2012311_+|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	37.3	1.4e-57
QAR22832.1|2012550_2013738_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
QAR22833.1|2014012_2014558_-	serine hydrolase family protein	NA	NA	NA	NA	NA
QAR22834.1|2014755_2015175_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
QAR22835.1|2015184_2016045_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
QAR22836.1|2016260_2017556_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
QAR22837.1|2017555_2018698_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	29.7	2.5e-29
QAR22995.1|2018895_2019585_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.6	1.8e-35
QAR22838.1|2019781_2020288_+	cupin domain-containing protein	NA	NA	NA	NA	NA
QAR22839.1|2020494_2021715_+|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.2	1.1e-94
QAR22840.1|2022007_2023579_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22841.1|2023605_2025813_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22842.1|2025809_2026748_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22843.1|2026917_2027976_-	NAD(P)-dependent oxidoreductase	NA	D1LW79	Prochlorococcus_phage	25.0	1.4e-05
QAR22844.1|2027977_2028706_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
QAR22845.1|2028702_2029698_-	acyltransferase	NA	NA	NA	NA	NA
QAR22846.1|2029713_2030526_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22847.1|2030575_2032066_-	virulence factor MviN	NA	NA	NA	NA	NA
QAR22848.1|2032055_2032877_-	hypothetical protein	NA	A0A1V0SD50	Indivirus	38.9	1.3e-08
QAR22849.1|2032916_2033870_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	40.0	2.2e-10
QAR22850.1|2034194_2034758_-	hypothetical protein	NA	NA	NA	NA	NA
QAR22851.1|2034914_2036273_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
