The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP035131	Lactobacillus plantarum strain SRCM103311 chromosome, complete genome	3192137	799050	807564	3192137		Synechococcus_phage(33.33%)	9	NA	NA
QAR75276.1|799050_799536_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	41.0	2.3e-16
QAR75277.1|799519_800650_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
QAR75278.1|800652_801384_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4SM18	Cyanophage	37.3	1.6e-37
QAR75279.1|801385_801640_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
QAR75280.1|801639_802320_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
QAR75281.1|802312_804532_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.3	4.5e-144
QAR75282.1|804516_805971_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.0	2.5e-50
QAR75283.1|805967_806993_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	41.0	3.2e-60
QAR75284.1|806985_807564_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.9	1.3e-21
>prophage 2
CP035131	Lactobacillus plantarum strain SRCM103311 chromosome, complete genome	3192137	973941	1062997	3192137	capsid,head,integrase,holin,tail,terminase,portal	Lactobacillus_phage(43.9%)	101	966990:967004	1063727:1063747
966990:967004	attL	GGATTAATGATTAAT	NA	NA	NA	NA
QAR75422.1|973941_975108_-|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	38.0	3.2e-64
966990:967004	attL	GGATTAATGATTAAT	NA	NA	NA	NA
QAR77419.1|975163_975712_-	helix-turn-helix domain-containing protein	NA	A0A0A8WFG2	Clostridium_phage	35.9	2.1e-10
QAR77419.1|975163_975712_-	helix-turn-helix domain-containing protein	NA	A0A0A8WFG2	Clostridium_phage	35.9	2.1e-10
975154:975168	attR	GGATTAATGATTAAT	NA	NA	NA	NA
QAR75423.1|975856_976045_+	hypothetical protein	NA	NA	NA	NA	NA
975154:975168	attR	GGATTAATGATTAAT	NA	NA	NA	NA
QAR75424.1|976056_976746_+	phage regulatory protein	NA	A0A192Y918	Salmonella_phage	30.9	9.1e-11
QAR77420.1|976799_977066_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75425.1|977378_977801_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75426.1|977793_978015_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75427.1|978027_978807_+	DNA replication protein	NA	A0A060ADS5	Enterococcus_phage	30.3	8.4e-21
QAR75428.1|980611_981070_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75429.1|981096_981273_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75430.1|981729_982143_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75431.1|983267_983594_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75432.1|984425_985364_-	EamA family transporter	NA	NA	NA	NA	NA
QAR75433.1|985428_985830_+	ACT domain-containing protein	NA	NA	NA	NA	NA
QAR75434.1|985839_987183_+	PFL family protein	NA	NA	NA	NA	NA
QAR75435.1|987555_988284_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.1	2.1e-34
QAR75436.1|988280_989804_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
QAR75437.1|990099_991281_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	29.9	1.8e-46
QAR75438.1|991515_992373_+	glucose transporter GlcU	NA	NA	NA	NA	NA
QAR75439.1|992593_993946_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
QAR75440.1|994371_994563_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75441.1|996980_998558_+	glycosyltransferase	NA	NA	NA	NA	NA
QAR75442.1|998529_1000293_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	40.7	5.3e-95
QAR75443.1|1000930_1001062_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75444.1|1001233_1001377_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75445.1|1001407_1001539_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75446.1|1001571_1001703_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75447.1|1001899_1002043_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75448.1|1002074_1002206_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75449.1|1002284_1002416_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75450.1|1002445_1002577_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75451.1|1007645_1008131_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
QAR75452.1|1008179_1008452_-	hypothetical protein	NA	NA	NA	NA	NA
QAR75453.1|1008476_1008710_-	hypothetical protein	NA	NA	NA	NA	NA
QAR75454.1|1010426_1011140_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QAR75455.1|1011286_1011466_+	DNA-binding protein	NA	NA	NA	NA	NA
QAR75456.1|1011509_1011617_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75457.1|1011735_1011963_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75458.1|1011976_1012777_+	DNA replication protein	NA	NA	NA	NA	NA
QAR75459.1|1012776_1014171_+	virulence protein	NA	Q4ZD27	Staphylococcus_phage	35.2	1.3e-69
QAR75460.1|1014315_1014735_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75461.1|1014758_1014941_+	sporulation protein Cse60	NA	NA	NA	NA	NA
QAR75462.1|1014950_1015289_+|head,tail	head-tail adaptor protein	head,tail	A0A2P0ZLF0	Lactobacillus_phage	33.6	1.0e-07
QAR75463.1|1015281_1015671_+	HNH endonuclease	NA	A0A1J0MFT4	Staphylococcus_phage	45.6	8.8e-19
QAR75464.1|1016286_1016760_+|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
QAR75465.1|1016756_1018460_+|terminase	terminase large subunit	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	40.1	9.2e-121
QAR75466.1|1018413_1018614_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75467.1|1018614_1019715_+|portal	phage portal protein	portal	A0A2H4J9Q5	uncultured_Caudovirales_phage	34.3	7.9e-49
QAR75468.1|1019711_1021253_+|capsid	phage major capsid protein	capsid	B8R651	Lactobacillus_phage	25.8	3.3e-45
QAR75469.1|1021662_1021932_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
QAR75470.1|1022080_1022461_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75471.1|1022543_1022849_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75472.1|1023266_1023473_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75473.1|1023824_1024946_-|integrase	site-specific integrase	integrase	D6PSS4	Lactobacillus_phage	31.5	1.2e-44
QAR75474.1|1025210_1026830_-	hypothetical protein	NA	A0A1S5SA14	Streptococcus_phage	48.2	3.1e-94
QAR75475.1|1027440_1027776_-	hypothetical protein	NA	A0A1B0Y4P2	Lactobacillus_phage	52.2	4.1e-25
QAR75476.1|1028298_1029795_-	hypothetical protein	NA	NA	NA	NA	NA
QAR75477.1|1029825_1030239_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0M4RD70	Bacillus_phage	31.3	4.5e-05
QAR75478.1|1030250_1030613_-	helix-turn-helix domain-containing protein	NA	A0A0U4KKM4	Exiguobacterium_phage	32.0	2.6e-09
QAR75479.1|1030785_1031016_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QAR75480.1|1031210_1031516_+	DUF771 domain-containing protein	NA	NA	NA	NA	NA
QAR75481.1|1031583_1032096_+	transcriptional regulator	NA	D6PST4	Lactobacillus_phage	44.7	3.2e-29
QAR75482.1|1032163_1032334_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75483.1|1032466_1032580_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75484.1|1032600_1033131_+	hypothetical protein	NA	E9LUU0	Lactobacillus_phage	59.2	4.6e-55
QAR75485.1|1033142_1034108_+	hypothetical protein	NA	A6M982	Geobacillus_virus	54.5	5.3e-65
QAR75486.1|1034187_1035096_+	DnaD domain protein	NA	NA	NA	NA	NA
QAR75487.1|1035092_1035380_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75488.1|1035376_1035895_+	hypothetical protein	NA	O03915	Lactobacillus_phage	68.4	1.7e-54
QAR75489.1|1035891_1036272_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75490.1|1036574_1036976_+	hypothetical protein	NA	A0A2K9VC36	Lactobacillus_phage	35.2	1.2e-10
QAR75491.1|1036972_1037263_+	hypothetical protein	NA	A0A2K9VCZ2	Lactobacillus_phage	69.7	1.7e-27
QAR75492.1|1037228_1037657_+	hypothetical protein	NA	K4I239	Lactobacillus_phage	56.6	3.1e-33
QAR75493.1|1037729_1038182_+	DUF1642 domain-containing protein	NA	A0A2K9VCG9	Lactobacillus_phage	50.0	3.5e-35
QAR75494.1|1038178_1038346_+	hypothetical protein	NA	E9LUP4	Lactobacillus_phage	82.6	2.6e-12
QAR75495.1|1038473_1038935_+	transcriptional regulator	NA	D6PSV8	Lactobacillus_phage	57.0	1.1e-39
QAR75496.1|1039951_1040710_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75497.1|1040749_1040929_+	hypothetical protein	NA	E9LUP6	Lactobacillus_phage	50.9	1.0e-06
QAR75498.1|1040897_1041161_+	hypothetical protein	NA	A0A1S5SBT9	Streptococcus_phage	58.6	2.6e-22
QAR75499.1|1041384_1041705_+	hypothetical protein	NA	A0A1J1J9Q7	Escherichia_phage	47.1	1.2e-18
QAR75500.1|1041763_1042624_+|terminase	terminase	terminase	V5URT8	Oenococcus_phage	48.9	1.5e-55
QAR75501.1|1042828_1044127_+|terminase	PBSX family phage terminase large subunit	terminase	B7T0C6	Staphylococcus_virus	50.4	1.3e-114
QAR75502.1|1044116_1045793_+|portal	phage portal protein	portal	D2IYW2	Enterococcus_phage	32.4	7.8e-64
QAR75503.1|1045806_1046751_+|head	phage head morphogenesis protein	head	NA	NA	NA	NA
QAR75504.1|1046859_1047507_+	DUF4355 domain-containing protein	NA	NA	NA	NA	NA
QAR75505.1|1047520_1048603_+|capsid	phage capsid protein	capsid	A0A0P0HSG2	Acinetobacter_phage	33.2	2.3e-40
QAR75506.1|1048617_1048968_+|head,tail	phage head-tail connector protein	head,tail	NA	NA	NA	NA
QAR77421.1|1048972_1049296_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75507.1|1049285_1049837_+|tail	phage tail protein	tail	NA	NA	NA	NA
QAR75508.1|1049842_1050229_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
QAR75509.1|1050240_1050816_+|tail	phage tail protein	tail	NA	NA	NA	NA
QAR75510.1|1050833_1051346_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75511.1|1051414_1051651_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75512.1|1051650_1055727_+	tape measure protein	NA	E9LUR1	Lactobacillus_phage	43.9	2.6e-81
QAR75513.1|1055736_1056633_+|tail	phage tail family protein	tail	A8ATA8	Listeria_phage	28.5	2.4e-19
QAR75514.1|1056629_1057811_+	hypothetical protein	NA	Q9T1A5	Listeria_phage	24.4	7.8e-18
QAR75515.1|1057807_1058074_+	hypothetical protein	NA	NA	NA	NA	NA
QAR75516.1|1058063_1060250_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
QAR75517.1|1061164_1062343_+	LysM peptidoglycan-binding domain-containing protein	NA	E9LUR8	Lactobacillus_phage	87.5	1.9e-194
QAR75518.1|1062342_1062606_+|holin	holin	holin	E9LUR9	Lactobacillus_phage	94.3	6.9e-36
QAR77422.1|1062619_1062997_+|holin	holin	holin	A0A2K9VCG4	Lactobacillus_phage	67.5	6.7e-16
1063727:1063747	attR	CCGTGCGGGTGATAAGTCGAC	NA	NA	NA	NA
>prophage 3
CP035131	Lactobacillus plantarum strain SRCM103311 chromosome, complete genome	3192137	1892308	1901001	3192137	transposase	Staphylococcus_phage(50.0%)	10	NA	NA
QAR76269.1|1892308_1893625_-	NADH peroxidase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.0	6.6e-10
QAR76270.1|1893778_1894405_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QAR76271.1|1894540_1895182_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
QAR76272.1|1895270_1895834_+	hypothetical protein	NA	NA	NA	NA	NA
QAR76273.1|1896137_1897058_+|transposase	IS30-like element ISLsa1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	37.9	1.2e-50
QAR76274.1|1897098_1897608_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
QAR76275.1|1897638_1898118_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	46.7	1.0e-32
QAR76276.1|1898114_1899329_-	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	46.9	3.1e-86
QAR76277.1|1899330_1899933_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.9	3.1e-23
QAR76278.1|1899933_1901001_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	33.9	1.6e-38
>prophage 4
CP035131	Lactobacillus plantarum strain SRCM103311 chromosome, complete genome	3192137	1906706	2017048	3192137	capsid,tRNA,head,holin,transposase,integrase,tail,terminase,portal,protease	Lactobacillus_phage(84.21%)	101	1980358:1980373	2014773:2014788
QAR76279.1|1906706_1907702_-	glycosyltransferase	NA	S5FKN0	Shigella_phage	38.8	3.1e-52
QAR76280.1|1908328_1910248_-	hypothetical protein	NA	A0A2P0ZL91	Lactobacillus_phage	72.2	1.7e-54
QAR76281.1|1910638_1911079_+	nucleoside 2-deoxyribosyltransferase	NA	A0A2P0ZL88	Lactobacillus_phage	95.9	4.4e-75
QAR76282.1|1911250_1912025_+|transposase	IS5-like element ISLpl3 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	53.2	2.1e-27
QAR76283.1|1911997_1912966_+|transposase	IS30-like element ISLpl1 family transposase	transposase	H7BW61	unidentified_phage	29.9	6.8e-20
QAR76284.1|1913051_1913612_-	hypothetical protein	NA	A0A2P0ZL75	Lactobacillus_phage	98.9	2.2e-100
QAR76285.1|1913699_1916138_-	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	99.3	0.0e+00
QAR76286.1|1916140_1916755_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	99.0	3.1e-111
QAR76287.1|1917098_1918046_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	99.4	2.9e-177
QAR76288.1|1918231_1919203_+	peptidase S41	NA	A0A2P0ZL68	Lactobacillus_phage	97.5	1.9e-179
QAR76289.1|1919293_1920523_-	hypothetical protein	NA	A0A2P0ZL72	Lactobacillus_phage	97.2	1.5e-213
QAR76290.1|1920840_1921821_-	HD domain-containing protein	NA	NA	NA	NA	NA
QAR76291.1|1921831_1924309_-	hypothetical protein	NA	NA	NA	NA	NA
QAR76292.1|1924298_1925519_-	DNA repair exonuclease	NA	NA	NA	NA	NA
QAR76293.1|1925588_1925933_-	YlbF family regulator	NA	NA	NA	NA	NA
QAR76294.1|1926023_1928153_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
QAR76295.1|1928446_1928569_-	hypothetical protein	NA	NA	NA	NA	NA
QAR76296.1|1928646_1929108_-	arginine repressor	NA	NA	NA	NA	NA
QAR76297.1|1929285_1930407_-	aminotransferase	NA	NA	NA	NA	NA
QAR76298.1|1930472_1931081_-	amino acid transporter	NA	NA	NA	NA	NA
QAR76299.1|1931314_1932766_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
QAR76300.1|1932868_1933111_+	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA	NA
QAR76301.1|1933381_1933993_+	L,D-transpeptidase	NA	NA	NA	NA	NA
QAR76302.1|1935189_1936662_-	glycosyl hydrolase family protein	NA	NA	NA	NA	NA
QAR76303.1|1936664_1938020_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
QAR76304.1|1938053_1938353_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
QAR76305.1|1938349_1938688_-	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
QAR76306.1|1938972_1939443_+	DUF3284 domain-containing protein	NA	NA	NA	NA	NA
QAR76307.1|1942342_1942999_-	hypothetical protein	NA	NA	NA	NA	NA
QAR76308.1|1943683_1945678_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	40.4	3.1e-35
QAR76309.1|1945947_1946424_+	hypothetical protein	NA	NA	NA	NA	NA
QAR76310.1|1946629_1948318_-|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	32.9	1.2e-75
QAR76311.1|1948589_1949036_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QAR76312.1|1949424_1949670_-	DUF2187 domain-containing protein	NA	NA	NA	NA	NA
QAR76313.1|1949796_1951188_-	MATE family efflux transporter	NA	NA	NA	NA	NA
QAR76314.1|1951463_1953239_-	SLC13 family permease	NA	NA	NA	NA	NA
QAR76315.1|1953671_1955411_-	aryl-sulfate sulfotransferase	NA	NA	NA	NA	NA
QAR76316.1|1955632_1956589_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
QAR76317.1|1956578_1957202_-	adenylyl-sulfate kinase	NA	A0A2K9L4R9	Tupanvirus	40.6	4.8e-27
QAR76318.1|1957204_1958380_-	sulfate adenylyltransferase	NA	A0A2P1ELS9	Moumouvirus	31.9	2.9e-49
QAR76319.1|1958357_1959995_-	hypothetical protein	NA	NA	NA	NA	NA
QAR76320.1|1960883_1963190_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
QAR76321.1|1963203_1965060_+	bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
QAR76322.1|1965132_1965492_+	DUF1516 family protein	NA	NA	NA	NA	NA
QAR77449.1|1965591_1966107_-	GtrA family protein	NA	NA	NA	NA	NA
QAR76323.1|1966161_1967232_+	hypothetical protein	NA	NA	NA	NA	NA
QAR76324.1|1967264_1967384_+	hypothetical protein	NA	NA	NA	NA	NA
QAR76325.1|1967396_1967822_+	hypothetical protein	NA	NA	NA	NA	NA
QAR77450.1|1968396_1968771_-|holin	holin	holin	A0A2K9VCG4	Lactobacillus_phage	71.2	2.4e-18
QAR76326.1|1968784_1969048_-|holin	holin	holin	E9LUR9	Lactobacillus_phage	93.1	2.0e-35
QAR76327.1|1969047_1970220_-	LysM peptidoglycan-binding domain-containing protein	NA	E9LUR8	Lactobacillus_phage	89.2	6.6e-195
QAR76328.1|1970231_1970477_-	hypothetical protein	NA	A0A0A1ENR9	Lactobacillus_phage	80.0	3.6e-18
QAR76329.1|1970473_1971595_-	collagen-like protein	NA	E9LUR7	Lactobacillus_phage	93.4	1.7e-54
QAR76330.1|1971743_1971992_-	hypothetical protein	NA	A0A2K9VDF6	Lactobacillus_phage	95.9	2.4e-30
QAR76331.1|1971984_1974837_-|tail	phage tail protein	tail	E9LUR4	Lactobacillus_phage	53.7	1.6e-138
QAR76332.1|1974854_1977212_-	hypothetical protein	NA	E9LUR3	Lactobacillus_phage	91.5	0.0e+00
1980358:1980373	attL	GTTGACCACCACGTCT	NA	NA	NA	NA
QAR76333.1|1984077_1984263_-	hypothetical protein	NA	NA	NA	NA	NA
QAR76334.1|1984307_1984682_-	hypothetical protein	NA	A0A2P0ZLH4	Lactobacillus_phage	94.4	4.6e-57
QAR76335.1|1984756_1985422_-|tail	phage tail protein	tail	A0A2P0ZLH1	Lactobacillus_phage	90.4	9.5e-106
QAR76336.1|1985437_1985818_-	DUF806 family protein	NA	A0A2P0ZLF4	Lactobacillus_phage	88.9	1.2e-57
QAR76337.1|1985817_1986225_-	HK97 gp10 family phage protein	NA	A0A2P0ZLE6	Lactobacillus_phage	89.4	1.8e-62
QAR76338.1|1986227_1986575_-|head,tail	head-tail adaptor protein	head,tail	A0A2P0ZLF0	Lactobacillus_phage	73.9	7.0e-44
QAR76339.1|1986564_1986897_-|head,tail	phage gp6-like head-tail connector protein	head,tail	E9LUQ4	Lactobacillus_phage	80.0	7.4e-43
QAR76340.1|1986969_1988202_-|capsid	phage major capsid protein	capsid	E9LUQ3	Lactobacillus_phage	93.4	3.7e-212
QAR76341.1|1988201_1988957_-|protease	Clp protease ClpP	protease	E9LUQ2	Lactobacillus_phage	92.4	1.3e-122
QAR76342.1|1988934_1990128_-|portal	phage portal protein	portal	E9LUQ1	Lactobacillus_phage	98.5	4.5e-223
QAR76343.1|1990130_1990325_-	DUF1056 family protein	NA	E9LUQ0	Lactobacillus_phage	95.3	1.8e-25
QAR76344.1|1992255_1992711_-|terminase	phage terminase small subunit P27 family	terminase	E9LUP8	Lactobacillus_phage	96.0	1.0e-79
QAR76345.1|1992842_1993373_-	endonuclease	NA	U5U4N5	Lactobacillus_phage	43.7	4.2e-32
QAR76346.1|1993350_1993878_-	HNH endonuclease	NA	E9LUP7	Lactobacillus_phage	89.7	9.6e-77
QAR76347.1|1993943_1994609_-	hypothetical protein	NA	NA	NA	NA	NA
QAR76348.1|1994676_1995006_-	hypothetical protein	NA	NA	NA	NA	NA
QAR76349.1|1995073_1995949_-	hypothetical protein	NA	NA	NA	NA	NA
QAR76350.1|1996790_1996961_-	hypothetical protein	NA	E9LUP4	Lactobacillus_phage	91.1	2.9e-19
QAR77451.1|1997472_1997853_-	hypothetical protein	NA	K4I239	Lactobacillus_phage	53.4	1.8e-32
QAR76351.1|1998094_1998586_-	methyltransferase domain-containing protein	NA	O03918	Lactobacillus_phage	91.8	1.0e-85
QAR76352.1|1998670_1998979_-	hypothetical protein	NA	E9LUN7	Lactobacillus_phage	93.1	3.5e-47
QAR76353.1|1999056_1999734_-	AP2 domain-containing protein	NA	A0A060QSU6	Streptococcus_phage	49.3	5.3e-11
QAR76354.1|1999905_2000691_-	ATP-binding protein	NA	E9LUN6	Lactobacillus_phage	90.8	3.1e-132
QAR76355.1|2001516_2002209_-	hypothetical protein	NA	E9LUU3	Lactobacillus_phage	98.7	4.7e-132
QAR76356.1|2002255_2002915_-	DUF669 domain-containing protein	NA	E9LUU2	Lactobacillus_phage	95.4	4.5e-92
QAR76357.1|2002916_2003579_-	nucleotide-binding protein	NA	E9LUU1	Lactobacillus_phage	99.1	1.0e-120
QAR76358.1|2003579_2004440_-	DUF1351 domain-containing protein	NA	A0A0P0IV40	Lactobacillus_phage	34.0	1.2e-36
QAR76359.1|2004634_2004859_-	hypothetical protein	NA	E9LUT8	Lactobacillus_phage	82.4	2.2e-27
QAR76360.1|2004861_2005116_-	hypothetical protein	NA	NA	NA	NA	NA
QAR76361.1|2005205_2005535_-	DUF771 domain-containing protein	NA	E9LUT3	Lactobacillus_phage	82.6	5.8e-48
QAR76362.1|2005627_2005819_+	hypothetical protein	NA	NA	NA	NA	NA
QAR76363.1|2006003_2006756_-	phage repressor protein/antirepressor Ant	NA	E9LUT0	Lactobacillus_phage	96.5	2.2e-58
QAR76364.1|2006768_2006984_-	hypothetical protein	NA	NA	NA	NA	NA
QAR76365.1|2007240_2007567_+	XRE family transcriptional regulator	NA	A0A1B0Y2R0	Lactobacillus_phage	44.1	6.9e-17
QAR76366.1|2007597_2007987_+	ImmA/IrrE family metallo-endopeptidase	NA	D6PSS8	Lactobacillus_phage	54.3	4.6e-36
QAR76367.1|2008051_2008252_+	hypothetical protein	NA	E9LUS6	Lactobacillus_phage	97.0	3.2e-25
QAR76368.1|2008582_2008996_+	hypothetical protein	NA	E9LUS4	Lactobacillus_phage	98.5	2.8e-71
QAR76369.1|2008988_2009303_+	hypothetical protein	NA	E9LUS3	Lactobacillus_phage	100.0	7.7e-50
QAR76370.1|2009445_2009628_+	hypothetical protein	NA	A0A2P0ZL93	Lactobacillus_phage	64.9	1.5e-13
QAR76371.1|2010072_2011209_+|integrase	site-specific integrase	integrase	E9LUS1	Lactobacillus_phage	98.9	1.5e-212
QAR76372.1|2011850_2014121_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	31.5	8.8e-119
QAR76373.1|2014182_2014470_-	hypothetical protein	NA	NA	NA	NA	NA
QAR76374.1|2014584_2015097_+	hypothetical protein	NA	NA	NA	NA	NA
2014773:2014788	attR	GTTGACCACCACGTCT	NA	NA	NA	NA
QAR76375.1|2015210_2015690_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
QAR77452.1|2016382_2017048_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 5
CP035131	Lactobacillus plantarum strain SRCM103311 chromosome, complete genome	3192137	2168309	2175376	3192137	transposase,integrase	Escherichia_phage(50.0%)	7	2159393:2159405	2170388:2170400
2159393:2159405	attL	GAGTCATCCAATG	NA	NA	NA	NA
QAR76488.1|2168309_2168897_+|integrase	integrase	integrase	D2XR58	Bacillus_phage	42.5	3.6e-32
QAR76489.1|2168959_2169454_+|transposase	transposase	transposase	NA	NA	NA	NA
QAR76490.1|2170609_2171452_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	37.2	1.9e-34
2170388:2170400	attR	GAGTCATCCAATG	NA	NA	NA	NA
QAR76491.1|2171521_2172550_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	42.4	2.2e-69
QAR76492.1|2172559_2173141_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	45.1	3.3e-38
QAR76493.1|2173200_2174490_-	hypothetical protein	NA	A0A2K9VCN9	Lactobacillus_phage	24.1	4.5e-27
QAR76494.1|2174512_2175376_-	glucose-1-phosphate thymidylyltransferase	NA	K7QKA7	Escherichia_phage	62.1	4.2e-98
>prophage 6
CP035131	Lactobacillus plantarum strain SRCM103311 chromosome, complete genome	3192137	2770890	2824270	3192137	tRNA,bacteriocin,protease	uncultured_Mediterranean_phage(28.57%)	49	NA	NA
QAR76997.1|2770890_2772162_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	43.7	4.5e-96
QAR76998.1|2772628_2774242_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.9	1.2e-143
QAR76999.1|2774414_2775023_-	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
QAR77000.1|2775067_2775508_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
QAR77001.1|2775870_2776803_+	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
QAR77002.1|2776817_2778170_+	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	32.9	5.2e-26
QAR77003.1|2778189_2778999_+	sugar-phosphatase	NA	NA	NA	NA	NA
QAR77004.1|2779168_2780155_-	lipoprotein	NA	NA	NA	NA	NA
QAR77005.1|2780237_2781260_-	YdcF family protein	NA	NA	NA	NA	NA
QAR77006.1|2781548_2782529_-	ribose-phosphate diphosphokinase	NA	A0A2K9L8D8	Tupanvirus	36.3	4.9e-42
QAR77007.1|2782894_2783719_-	serine hydrolase	NA	NA	NA	NA	NA
QAR77008.1|2783954_2785337_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L140	Tupanvirus	33.2	5.7e-28
QAR77009.1|2785405_2786242_-	pur operon repressor	NA	NA	NA	NA	NA
QAR77010.1|2786598_2787402_-	metal ABC transporter permease	NA	NA	NA	NA	NA
QAR77011.1|2787388_2788087_-	ABC transporter ATP-binding protein	NA	A0A1V0SGN0	Hokovirus	27.8	1.2e-15
QAR77012.1|2788355_2789300_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
QAR77013.1|2789345_2789528_+	hypothetical protein	NA	NA	NA	NA	NA
QAR77014.1|2789609_2790476_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
QAR77015.1|2790608_2790860_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77016.1|2790964_2791855_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
QAR77017.1|2791851_2792415_-	ribonuclease M5	NA	NA	NA	NA	NA
QAR77018.1|2792401_2793178_-	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
QAR77019.1|2793429_2793918_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77020.1|2794480_2795371_+	transcriptional regulator	NA	NA	NA	NA	NA
QAR77021.1|2795404_2796589_-	Bcr/CflA family efflux MFS transporter	NA	NA	NA	NA	NA
QAR77022.1|2796869_2797244_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77023.1|2797730_2799782_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	35.6	2.3e-89
QAR77024.1|2800103_2800493_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
QAR77025.1|2801087_2801930_-	DUF72 domain-containing protein	NA	NA	NA	NA	NA
QAR77026.1|2801929_2802634_-	NAD-dependent protein deacylase	NA	NA	NA	NA	NA
QAR77027.1|2802655_2803615_-	IpaB/EvcA family protein	NA	NA	NA	NA	NA
QAR77028.1|2803607_2804882_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA	NA
QAR77029.1|2804927_2805845_-	Ppx/GppA family phosphatase	NA	NA	NA	NA	NA
QAR77030.1|2806244_2807258_-|tRNA	tRNA-dihydrouridine synthase family protein	tRNA	NA	NA	NA	NA
QAR77031.1|2807816_2808239_-	DUF3284 domain-containing protein	NA	NA	NA	NA	NA
QAR77032.1|2808228_2808417_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77033.1|2808423_2809785_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
QAR77034.1|2809857_2810568_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
QAR77035.1|2810975_2811992_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
QAR77036.1|2812431_2813208_-	carbon-nitrogen family hydrolase	NA	NA	NA	NA	NA
QAR77037.1|2813466_2815776_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
QAR77038.1|2815870_2816074_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77039.1|2816953_2817634_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QAR77040.1|2817720_2818389_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QAR77041.1|2818456_2819146_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QAR77042.1|2819235_2820612_-	HlyD family secretion protein	NA	NA	NA	NA	NA
QAR77043.1|2823044_2823215_+|bacteriocin	two-peptide bacteriocin plantaricin EF subunit PlnE	bacteriocin	NA	NA	NA	NA
QAR77044.1|2823239_2823398_+|bacteriocin	two-peptide bacteriocin plantaricin EF subunit PlnF	bacteriocin	NA	NA	NA	NA
QAR77045.1|2823496_2824270_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 7
CP035131	Lactobacillus plantarum strain SRCM103311 chromosome, complete genome	3192137	3137363	3148573	3192137	capsid,head,tail,terminase,portal	Bacillus_phage(25.0%)	13	NA	NA
QAR77326.1|3137363_3139238_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.8	5.5e-34
QAR77327.1|3139251_3139959_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	40.1	1.3e-44
QAR77328.1|3140561_3140792_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77329.1|3140878_3141079_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	71.4	1.4e-20
QAR77330.1|3141202_3141580_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77331.1|3141729_3141999_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
QAR77332.1|3142114_3143644_-|capsid	phage major capsid protein	capsid	B8R651	Lactobacillus_phage	26.0	2.1e-44
QAR77333.1|3143640_3144741_-|portal	phage portal protein	portal	A0A2H4J9Q5	uncultured_Caudovirales_phage	34.6	4.6e-49
QAR77334.1|3144741_3144942_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77335.1|3144895_3146599_-|terminase	terminase large subunit	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	40.5	2.4e-121
QAR77336.1|3146595_3147069_-|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
QAR77337.1|3147852_3148242_-	HNH endonuclease	NA	A0A1J0MFT4	Staphylococcus_phage	45.6	1.0e-19
QAR77479.1|3148234_3148573_-|head,tail	head-tail adaptor protein	head,tail	A0A2P0ZLF0	Lactobacillus_phage	36.6	3.2e-09
>prophage 1
CP035135	Lactobacillus plantarum strain SRCM103311 plasmid unnamed4	106680	5078	59997	106680	transposase,protease,holin	unidentified_phage(21.43%)	57	NA	NA
QAR77588.1|5078_5183_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
QAR77589.1|5463_5835_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QAR77590.1|5858_6098_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77591.1|6099_8277_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77592.1|8260_8728_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77593.1|8745_9246_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77594.1|9247_9538_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77595.1|9863_10772_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77596.1|10790_11216_-	thioredoxin	NA	NA	NA	NA	NA
QAR77597.1|11212_11512_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77598.1|11508_11727_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77681.1|11728_11941_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77599.1|11940_12900_-	DUF3102 domain-containing protein	NA	A0A2H4JAH5	uncultured_Caudovirales_phage	48.2	1.7e-34
QAR77600.1|13716_14346_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77601.1|14358_15522_-	CHAP domain-containing protein	NA	A0A0A0RSI6	Bacillus_phage	35.5	4.5e-10
QAR77602.1|15522_15729_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77603.1|15731_17684_-	ATPase	NA	NA	NA	NA	NA
QAR77604.1|17699_18359_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77605.1|18330_18714_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77606.1|21864_23397_-	plasmid replication protein	NA	NA	NA	NA	NA
QAR77607.1|24333_25101_+	ParA family protein	NA	F0PIG8	Enterococcus_phage	30.7	6.2e-16
QAR77682.1|25250_25460_+	hypothetical protein	NA	NA	NA	NA	NA
QAR77608.1|25894_26203_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77609.1|26316_27618_+	Y-family DNA polymerase	NA	M1Q231	Streptococcus_phage	40.0	7.6e-83
QAR77610.1|27610_27931_+	acetyl-CoA carboxylase	NA	NA	NA	NA	NA
QAR77611.1|27923_28322_+	hypothetical protein	NA	NA	NA	NA	NA
QAR77683.1|28384_28723_-	ribonuclease G	NA	NA	NA	NA	NA
QAR77612.1|28789_30601_-	LtrC	NA	NA	NA	NA	NA
QAR77613.1|30601_30820_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77614.1|30944_33659_-	conjugal transfer protein TraG	NA	NA	NA	NA	NA
QAR77615.1|33841_34126_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77616.1|34597_35773_+|transposase	IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	29.2	1.8e-27
QAR77617.1|37106_38498_-	MATE family efflux transporter	NA	NA	NA	NA	NA
QAR77618.1|38514_38655_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
QAR77619.1|38681_39611_+|transposase	IS30 family transposase	transposase	H7BW47	unidentified_phage	34.1	5.2e-25
QAR77620.1|39627_40320_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77621.1|41159_41714_-	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	44.6	2.0e-32
QAR77684.1|42717_42942_-	hypothetical protein	NA	NA	NA	NA	NA
QAR77622.1|43007_43886_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	36.8	1.2e-42
QAR77623.1|43909_44197_-|transposase	transposase	transposase	NA	NA	NA	NA
QAR77624.1|44750_45302_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QAR77625.1|45473_47309_+	DHA2 family efflux MFS transporter permease subunit	NA	A0A0M3UL24	Mycobacterium_phage	25.6	1.4e-26
QAR77626.1|47314_47641_+	DUF4828 domain-containing protein	NA	NA	NA	NA	NA
QAR77627.1|47733_48249_+	HXXEE domain-containing protein	NA	NA	NA	NA	NA
QAR77628.1|48527_48644_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
QAR77629.1|48670_49600_+|transposase	IS30 family transposase	transposase	H7BW47	unidentified_phage	33.3	1.3e-23
QAR77630.1|49765_51145_-	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.7	5.0e-08
QAR77631.1|51213_53025_-	pyruvate oxidase	NA	NA	NA	NA	NA
QAR77632.1|53144_54065_-|transposase	IS30-like element ISLsa1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	37.9	6.0e-50
QAR77633.1|54257_54818_+	hypothetical protein	NA	NA	NA	NA	NA
QAR77634.1|55087_55351_-	aldo/keto reductase	NA	NA	NA	NA	NA
QAR77635.1|55717_56161_+	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
QAR77636.1|56157_56610_+	DUF3021 domain-containing protein	NA	NA	NA	NA	NA
QAR77637.1|56745_57544_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QAR77638.1|57963_58650_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	52.2	2.1e-63
QAR77685.1|58954_59041_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
QAR77639.1|59067_59997_+|transposase	IS30-like element ISLpl1 family transposase	transposase	H7BW47	unidentified_phage	34.4	2.3e-25
