The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP035151	Pediococcus acidilactici strain SRCM103367 chromosome, complete genome	1852892	432559	440233	1852892		Bacillus_phage(33.33%)	8	NA	NA
QAR70605.1|432559_433675_+	peptide chain release factor 2	NA	B5LLF2	Mycobacterium_phage	51.6	1.4e-05
QAR70606.1|433687_434392_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.6	3.3e-40
QAR70607.1|434363_435752_+	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	30.5	1.7e-24
QAR70608.1|435979_436861_+	phosphate ABC transporter substrate-binding protein PstS family protein	NA	M4QRU1	Synechococcus_phage	27.7	3.2e-08
QAR70609.1|436853_437768_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
QAR70610.1|437764_438652_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
QAR70611.1|438655_439462_+	phosphate ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	43.2	1.5e-09
QAR70612.1|439474_440233_+	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.9	2.1e-16
>prophage 2
CP035151	Pediococcus acidilactici strain SRCM103367 chromosome, complete genome	1852892	510153	519637	1852892		Enterococcus_phage(33.33%)	8	NA	NA
QAR70671.1|510153_511581_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	26.7	1.7e-11
QAR70672.1|511591_512167_-	ABC transporter permease	NA	NA	NA	NA	NA
QAR70673.1|512615_513356_+	glucose 1-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.3	8.3e-18
QAR70674.1|513878_516029_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	59.9	1.5e-256
QAR70675.1|516039_516627_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	56.9	3.5e-51
QAR70676.1|516641_517418_+	Fe-S cluster assembly ATPase SufC	NA	W5SAS9	Pithovirus	25.4	5.6e-09
QAR71877.1|517398_518460_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
QAR70677.1|518407_519637_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	40.6	1.0e-81
>prophage 3
CP035151	Pediococcus acidilactici strain SRCM103367 chromosome, complete genome	1852892	965676	972998	1852892	tRNA	Staphylococcus_phage(28.57%)	8	NA	NA
QAR71075.1|965676_966522_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	35.6	2.1e-17
QAR71076.1|966695_966902_+	hypothetical protein	NA	NA	NA	NA	NA
QAR71077.1|966918_967401_-	dihydrofolate reductase	NA	A0A076GDN3	Bacillus_phage	39.1	3.6e-22
QAR71078.1|967418_968369_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	59.6	1.0e-113
QAR71079.1|968373_970269_-	ABC transporter ATP-binding protein	NA	A0A2H4UUX5	Bodo_saltans_virus	27.4	6.5e-51
QAR71080.1|970271_971480_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	34.5	1.4e-43
QAR71081.1|971595_972465_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	37.8	1.2e-55
QAR71082.1|972527_972998_-	nucleoside 2-deoxyribosyltransferase	NA	A0A1G5S9Z4	Enterococcus_phage	39.9	1.3e-16
>prophage 4
CP035151	Pediococcus acidilactici strain SRCM103367 chromosome, complete genome	1852892	996834	1110520	1852892	holin,integrase,transposase,protease,terminase,head,tRNA,tail,capsid,portal	Lactobacillus_phage(36.73%)	114	1041119:1041145	1078516:1078542
QAR71103.1|996834_997545_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
QAR71104.1|997640_998780_-	RNA polymerase sigma factor RpoD	NA	M4SMP8	Cyanophage	35.1	8.5e-38
QAR71105.1|998797_1000654_-	DNA primase	NA	A0A1S5RFR1	Helicobacter_phage	33.1	1.4e-50
QAR71106.1|1000999_1003072_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
QAR71107.1|1003071_1003971_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
QAR71108.1|1004256_1005018_-	DNA repair protein RecO	NA	NA	NA	NA	NA
QAR71109.1|1005020_1005935_-	GTPase Era	NA	NA	NA	NA	NA
QAR71110.1|1005959_1006343_-	diacylglycerol kinase family protein	NA	NA	NA	NA	NA
QAR71889.1|1006326_1006797_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
QAR71111.1|1006801_1007770_-	phosphate starvation-inducible protein PhoH	NA	L7TP00	Rhizobium_phage	47.6	1.8e-49
QAR71112.1|1007781_1008225_-	GatB/YqeY domain-containing protein	NA	A0A248SJP2	Salicola_phage	28.1	5.7e-06
QAR71113.1|1008283_1008469_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
QAR71114.1|1008668_1009478_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
QAR71115.1|1009500_1009905_+	hypothetical protein	NA	NA	NA	NA	NA
QAR71116.1|1010129_1011020_-	deoxyribonuclease IV	NA	A0A1V0SID1	Klosneuvirus	29.2	9.3e-24
QAR71117.1|1011022_1012228_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
QAR71118.1|1012220_1013378_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
QAR71119.1|1013390_1014269_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	26.2	5.8e-18
QAR71120.1|1014551_1016333_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SFI4	Hokovirus	32.6	8.7e-05
QAR71121.1|1016348_1017623_-|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L0H9	Tupanvirus	25.7	1.0e-23
QAR71122.1|1018038_1018908_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	38.2	8.5e-22
QAR71123.1|1018892_1019516_-	HAD family hydrolase	NA	NA	NA	NA	NA
QAR71124.1|1019606_1020056_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
QAR71125.1|1020065_1022297_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1V0SJX2	Klosneuvirus	35.2	3.3e-09
QAR71126.1|1022404_1022734_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71127.1|1022748_1023486_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
QAR71128.1|1023495_1024443_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
QAR71129.1|1024769_1026068_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	36.9	5.1e-63
QAR71890.1|1026291_1026522_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71130.1|1027339_1027540_-	transcriptional regulator	NA	NA	NA	NA	NA
QAR71131.1|1028076_1029261_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
QAR71132.1|1029494_1030490_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	44.4	6.4e-74
QAR71133.1|1030836_1031295_-	flavodoxin	NA	NA	NA	NA	NA
QAR71134.1|1031396_1031846_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QAR71135.1|1031948_1032380_-	ABC transporter ATP-binding protein	NA	A0A2H4UU96	Bodo_saltans_virus	31.5	1.7e-10
QAR71136.1|1032376_1033585_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	53.2	5.3e-06
QAR71137.1|1033928_1034603_+|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	36.3	8.3e-33
QAR71138.1|1034599_1035493_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	29.7	2.7e-15
QAR71139.1|1036558_1036939_-	glucose starvation-inducible protein B	NA	NA	NA	NA	NA
QAR71140.1|1037532_1038042_+	hypothetical protein	NA	NA	NA	NA	NA
QAR71141.1|1038159_1038426_+	hypothetical protein	NA	NA	NA	NA	NA
QAR71142.1|1038593_1039232_-	carbonic anhydrase family protein	NA	NA	NA	NA	NA
QAR71143.1|1039635_1040745_-	lactate oxidase	NA	NA	NA	NA	NA
1041119:1041145	attL	GGTACTAATAAGGAGAGTACAGGATTT	NA	NA	NA	NA
QAR71144.1|1041871_1042993_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N7IR99	Lactobacillus_phage	52.9	3.6e-97
QAR71145.1|1042976_1043222_-|holin	holin	holin	NA	NA	NA	NA
QAR71146.1|1043221_1043542_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71147.1|1043570_1044104_-	acyltransferase	NA	NA	NA	NA	NA
QAR71148.1|1044100_1046830_-	DUF2479 domain-containing protein	NA	F8J173	Lactobacillus_virus	29.5	3.4e-69
QAR71149.1|1046882_1047323_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71150.1|1047319_1047646_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71151.1|1047635_1048859_-	hypothetical protein	NA	A0A0M7RDS2	Lactobacillus_phage	46.1	5.7e-80
QAR71152.1|1048788_1049631_-|tail	phage tail family protein	tail	A0A0M7RF73	Lactobacillus_phage	36.8	1.8e-45
QAR71153.1|1049637_1054833_-	peptidase M23	NA	E9LUR1	Lactobacillus_phage	36.6	4.9e-24
QAR71154.1|1055041_1055455_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71155.1|1055561_1056206_-|tail	phage tail protein	tail	Q8LTK4	Lactococcus_phage	44.5	1.0e-35
QAR71156.1|1056205_1056592_-	DUF806 family protein	NA	B8R654	Lactobacillus_phage	33.3	3.2e-13
QAR71891.1|1056594_1056990_-|tail	phage tail protein	tail	A0A286QQY0	Streptococcus_phage	53.1	1.2e-28
QAR71892.1|1057009_1057357_-|head,tail	head-tail adaptor protein	head,tail	A0A2P0ZLF0	Lactobacillus_phage	41.8	2.5e-17
QAR71893.1|1057334_1057646_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
QAR71894.1|1057800_1059033_-|capsid	phage major capsid protein	capsid	D2KRA9	Lactobacillus_phage	58.9	5.5e-83
QAR71157.1|1059153_1059744_-|head,protease	HK97 family phage prohead protease	head,protease	B8R651	Lactobacillus_phage	47.6	2.3e-42
QAR71158.1|1059727_1060840_-|portal	phage portal protein	portal	Q9AZM4	Lactococcus_phage	37.1	8.8e-64
QAR71159.1|1061040_1062915_-|terminase	terminase large subunit	terminase	A0A0M7RDK9	Lactobacillus_phage	40.8	7.5e-140
QAR71160.1|1062914_1063379_-|terminase	phage terminase small subunit P27 family	terminase	E9LUP8	Lactobacillus_phage	57.3	1.6e-43
QAR71161.1|1063558_1063879_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71162.1|1063880_1064174_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71895.1|1064170_1064620_-	HNH endonuclease	NA	B8R694	Lactobacillus_phage	38.3	6.1e-24
QAR71163.1|1065107_1065551_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71164.1|1065869_1066067_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71165.1|1066267_1066639_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
QAR71166.1|1066771_1067218_-	RusA family crossover junction endodeoxyribonuclease	NA	A8YQM5	Lactobacillus_phage	46.3	1.2e-27
QAR71167.1|1067153_1067783_-	RNA polymerase subunit sigma-70	NA	NA	NA	NA	NA
QAR71168.1|1067900_1068716_-	ATP-binding protein	NA	O03914	Lactobacillus_phage	46.4	2.8e-59
QAR71169.1|1068696_1069419_-	hypothetical protein	NA	E9LUM6	Lactobacillus_phage	60.6	3.1e-78
QAR71170.1|1069423_1070098_-	hypothetical protein	NA	E9LUU3	Lactobacillus_phage	66.1	1.0e-83
QAR71171.1|1070109_1070535_-	single-stranded DNA-binding protein	NA	A0A2D1GPB7	Lactobacillus_phage	58.2	3.6e-42
QAR71172.1|1070527_1070734_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71173.1|1070726_1071452_-	Erf family protein	NA	H9A0Y7	Staphylococcus_phage	36.9	4.6e-21
QAR71896.1|1071452_1071908_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
QAR71174.1|1072063_1072378_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71175.1|1072477_1072807_-	DUF771 domain-containing protein	NA	NA	NA	NA	NA
QAR71176.1|1072820_1073546_-	phage regulatory protein	NA	D2IYT0	Enterococcus_phage	51.7	3.2e-54
QAR71177.1|1073605_1073914_+	hypothetical protein	NA	NA	NA	NA	NA
QAR71178.1|1073903_1074110_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71179.1|1074153_1074939_-	phage antirepressor	NA	A0A1Q1PVU2	Staphylococcus_phage	57.1	1.2e-80
QAR71180.1|1074954_1075143_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71181.1|1075408_1075747_+	XRE family transcriptional regulator	NA	A0A097QQ00	Enterococcus_phage	38.9	1.5e-14
QAR71182.1|1075750_1076161_+	hypothetical protein	NA	NA	NA	NA	NA
QAR71183.1|1076229_1076616_+	transporter	NA	A0A0P0I7G8	Lactobacillus_phage	64.7	4.0e-32
QAR71184.1|1076847_1077045_+	hypothetical protein	NA	NA	NA	NA	NA
QAR71185.1|1077267_1078383_+|integrase	site-specific integrase	integrase	A0A0M9JJ77	Lactobacillus_phage	51.9	7.6e-100
QAR71186.1|1080680_1081064_-	DUF1093 domain-containing protein	NA	NA	NA	NA	NA
1078516:1078542	attR	GGTACTAATAAGGAGAGTACAGGATTT	NA	NA	NA	NA
QAR71187.1|1081292_1081541_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
QAR71188.1|1081748_1082345_+	DUF1211 domain-containing protein	NA	NA	NA	NA	NA
QAR71189.1|1082662_1083988_-	Na+/H+ antiporter NhaC family protein	NA	NA	NA	NA	NA
QAR71190.1|1084394_1085570_-	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
QAR71191.1|1085675_1086092_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71192.1|1086088_1086532_-	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
QAR71193.1|1086744_1088205_-	catalase	NA	A0A2K9L572	Tupanvirus	49.7	3.6e-105
QAR71194.1|1088388_1089165_-	ABC transporter	NA	NA	NA	NA	NA
QAR71195.1|1089161_1090058_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	36.8	1.1e-24
QAR71897.1|1090602_1095429_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
QAR71196.1|1097284_1097803_-	adenine phosphoribosyltransferase	NA	A0A2K9L2N8	Tupanvirus	31.0	1.7e-09
QAR71197.1|1097803_1100125_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	33.1	3.2e-84
QAR71198.1|1100142_1100928_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
QAR71199.1|1100986_1101913_-	ribonuclease Z	NA	NA	NA	NA	NA
QAR71200.1|1102043_1102346_+	hypothetical protein	NA	NA	NA	NA	NA
QAR71201.1|1102413_1103709_-	GTPase ObgE	NA	NA	NA	NA	NA
QAR71202.1|1103748_1105533_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
QAR71203.1|1105697_1106441_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.4	1.5e-30
QAR71898.1|1106440_1107928_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
QAR71204.1|1108288_1108579_-	nucleotide pyrophosphohydrolase	NA	A0A1S7FYY8	Listeria_phage	47.9	7.7e-20
QAR71205.1|1108581_1109169_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
QAR71206.1|1109263_1110520_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	58.8	1.9e-139
>prophage 5
CP035151	Pediococcus acidilactici strain SRCM103367 chromosome, complete genome	1852892	1450765	1462679	1852892		Streptococcus_phage(25.0%)	14	NA	NA
QAR71520.1|1450765_1451776_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	36.9	5.1e-34
QAR71521.1|1451782_1452118_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71522.1|1452133_1452763_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	50.7	3.5e-49
QAR71523.1|1453188_1453788_-	recombination protein RecR	NA	NA	NA	NA	NA
QAR71524.1|1453811_1454126_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
QAR71525.1|1454141_1455878_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	40.0	6.2e-56
QAR71526.1|1456092_1456578_-	nucleoside deaminase	NA	A0A2H4PQS8	Staphylococcus_phage	32.6	1.4e-05
QAR71527.1|1456570_1457176_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
QAR71528.1|1457397_1457628_+	glutaredoxin-like protein NrdH	NA	A0A0M7REK7	Lactobacillus_phage	46.2	1.6e-12
QAR71529.1|1457720_1459886_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	60.7	4.3e-256
QAR71530.1|1459904_1460858_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	64.1	5.0e-116
QAR71531.1|1461026_1461251_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71532.1|1461510_1461786_-	hypothetical protein	NA	NA	NA	NA	NA
QAR71533.1|1461800_1462679_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	39.5	4.2e-37
