assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_004103635.1_ASM410363v1	CP035266	Pediococcus acidilactici strain SRCM103444 chromosome, complete genome	1	1323837-1323940	1	CRISPRCasFinder	no		csa3,DinG,cas3,DEDDh,RT,csn2,cas2,cas1,cas9	Orphan	CAGATGCTCTACCAACTGAGCTAA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,cas3,DEDDh,RT,csn2,cas2,cas1,cas9	NA|244aa|up_1|CP035266.1_1319683_1320415_+,NA|63aa|down_6|CP035266.1_1335864_1336053_-,NA|85aa|down_9|CP035266.1_1340608_1340863_-	NA|424aa|up_9|CP035266.1_1308516_1309788_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|240aa|up_8|CP035266.1_1309913_1310633_-	cd02553, PseudoU_synth_RsuA, Pseudouridine synthase, Escherichia coli RsuA like	NA|561aa|up_7|CP035266.1_1310643_1312326_-	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|806aa|up_6|CP035266.1_1312581_1314999_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|212aa|up_5|CP035266.1_1315405_1316041_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|188aa|up_4|CP035266.1_1316033_1316597_+	pfam06962, rRNA_methylase, Putative rRNA methylase	NA|490aa|up_3|CP035266.1_1316676_1318146_-	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|397aa|up_2|CP035266.1_1318321_1319512_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|244aa|up_1|CP035266.1_1319683_1320415_+	NA	NA|424aa|up_0|CP035266.1_1320769_1322041_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|335aa|down_0|CP035266.1_1329515_1330520_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|339aa|down_1|CP035266.1_1330565_1331582_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|396aa|down_2|CP035266.1_1331612_1332800_-	cd03817, GT4_UGDG-like, UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins	NA|258aa|down_3|CP035266.1_1332885_1333659_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|575aa|down_4|CP035266.1_1333731_1335456_-	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|89aa|down_5|CP035266.1_1335455_1335722_-	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|63aa|down_6|CP035266.1_1335864_1336053_-	NA	NA|736aa|down_7|CP035266.1_1336268_1338476_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|326aa|down_8|CP035266.1_1339012_1339990_-	PRK05458, PRK05458, guanosine 5'-monophosphate oxidoreductase; Provisional	NA|85aa|down_9|CP035266.1_1340608_1340863_-	NA
GCA_004103635.1_ASM410363v1	CP035266	Pediococcus acidilactici strain SRCM103444 chromosome, complete genome	2	1524679-1524978	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	csa3,DinG,cas3,DEDDh,RT,csn2,cas2,cas1,cas9	Type II-B,Type II-A,Type II-C	GATCTTAACCTTATTGATTTAACATCCTTCTGAAAC,GATCTTAACCTTATTGATTTAACATCCTTCTGAAAC,GATCTTAACCTTATTGATTTAACATCCTTCTGAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	4,4,4	4	TypeII-B,TypeII-A,TypeII-C	csa3,DinG,cas3,DEDDh,RT,csn2,cas2,cas1,cas9	NA,NA	NA|788aa|up_9|CP035266.1_1511439_1513803_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|185aa|up_8|CP035266.1_1513951_1514506_-	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|129aa|up_7|CP035266.1_1514634_1515021_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|440aa|up_6|CP035266.1_1515305_1516625_-	COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]	NA|213aa|up_5|CP035266.1_1516656_1517295_+	COG1739, COG1739, Uncharacterized conserved protein [Function unknown]	NA|392aa|up_4|CP035266.1_1517362_1518538_-	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins	NA|611aa|up_3|CP035266.1_1518759_1520592_-	pfam13520, AA_permease_2, Amino acid permease	NA|541aa|up_2|CP035266.1_1520891_1522514_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|95aa|up_1|CP035266.1_1522536_1522821_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|216aa|up_0|CP035266.1_1523010_1523658_+	pfam02517, Abi, CAAX protease self-immunity	csn2|224aa|down_0|CP035266.1_1525006_1525678_-	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|102aa|down_1|CP035266.1_1525674_1525980_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|302aa|down_2|CP035266.1_1525957_1526863_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1365aa|down_3|CP035266.1_1527078_1531173_-	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|192aa|down_4|CP035266.1_1531356_1531932_+	PRK08581, PRK08581, amidase domain-containing protein	NA|845aa|down_5|CP035266.1_1532158_1534693_-	cd09601, M1_APN-Q_like, Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1)	NA|470aa|down_6|CP035266.1_1534719_1536129_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|215aa|down_7|CP035266.1_1536321_1536966_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|518aa|down_8|CP035266.1_1537259_1538813_-	PRK00074, guaA, GMP synthase; Reviewed	NA|641aa|down_9|CP035266.1_1538885_1540808_-	cd02079, P-type_ATPase_HM, P-type heavy metal-transporting ATPase
