The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP030051	Bradyrhizobium guangdongense strain CCBAU 51649 chromosome, complete genome	7456045	1019351	1086847	7456045	transposase	Pandoravirus(12.5%)	60	NA	NA
QAU37106.1|1019351_1020323_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
QAU37107.1|1020634_1021366_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
QAU37108.1|1021447_1021951_-	DNA-binding protein	NA	NA	NA	NA	NA
QAU37109.1|1022019_1022802_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
QAU37110.1|1022806_1024102_-	O-acetylhomoserine aminocarboxypropyltransferase	NA	A0A0B5JD48	Pandoravirus	25.3	2.9e-10
QAU37111.1|1024198_1025020_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
QAU37112.1|1025122_1026088_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
QAU37113.1|1026091_1026709_+	flavin reductase family protein	NA	NA	NA	NA	NA
QAU37114.1|1026754_1027615_+	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase	NA	NA	NA	NA	NA
QAU42521.1|1027691_1028420_+	2-oxo-hepta-3-ene-1,7-dioic acid hydratase	NA	NA	NA	NA	NA
QAU37115.1|1028445_1028841_+	RidA family protein	NA	NA	NA	NA	NA
QAU37116.1|1028854_1029730_+	2-pyrone-4,6-dicarboxylate hydrolase	NA	NA	NA	NA	NA
QAU37117.1|1029719_1029923_+	hypothetical protein	NA	NA	NA	NA	NA
QAU37118.1|1029847_1030855_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
QAU37119.1|1030992_1031481_+	cyclic nucleotide-binding protein	NA	NA	NA	NA	NA
QAU37120.1|1033530_1033719_+	hypothetical protein	NA	NA	NA	NA	NA
QAU37121.1|1033687_1035451_+	thioredoxin reductase	NA	NA	NA	NA	NA
QAU37122.1|1035571_1035880_+	EthD family reductase	NA	NA	NA	NA	NA
QAU42522.1|1036016_1036604_+	hypothetical protein	NA	NA	NA	NA	NA
QAU37123.1|1036751_1037576_+	alpha/beta hydrolase	NA	A0A2R4AQZ9	Mycobacterium_phage	25.8	1.7e-11
QAU37124.1|1037585_1038227_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
QAU37125.1|1038309_1039248_+	short chain dehydrogenase	NA	NA	NA	NA	NA
QAU42523.1|1039187_1039934_+	epimerase	NA	NA	NA	NA	NA
QAU37126.1|1040014_1040473_+	DUF2948 domain-containing protein	NA	NA	NA	NA	NA
QAU37127.1|1040631_1041927_+	histidinol dehydrogenase	NA	NA	NA	NA	NA
QAU37128.1|1041923_1042421_+	UPF0262 family protein	NA	NA	NA	NA	NA
QAU37129.1|1042427_1042895_+	low molecular weight phosphatase family protein	NA	NA	NA	NA	NA
QAU37130.1|1043051_1043681_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
QAU37131.1|1043807_1043990_+	DNA gyrase inhibitor YacG	NA	NA	NA	NA	NA
QAU37132.1|1044302_1044596_-	hypothetical protein	NA	NA	NA	NA	NA
QAU37133.1|1045189_1046038_-	hypothetical protein	NA	U5N3V8	Enterobacteria_phage	35.4	2.9e-35
QAU37134.1|1045998_1047471_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
QAU42524.1|1047752_1048781_-|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	30.4	1.9e-20
QAU37135.1|1049106_1049949_+	hypothetical protein	NA	NA	NA	NA	NA
QAU37136.1|1050314_1052378_+	ATP-binding protein	NA	NA	NA	NA	NA
QAU37137.1|1052374_1052968_+	hypothetical protein	NA	NA	NA	NA	NA
QAU37138.1|1053025_1054525_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	28.1	6.0e-15
QAU37139.1|1054524_1055388_+|transposase	transposase	transposase	A0A059NT77	Lactococcus_phage	36.2	3.1e-32
QAU42525.1|1055850_1056579_+	SOS response-associated peptidase	NA	A0A291AUP1	Sinorhizobium_phage	39.1	4.0e-41
QAU37140.1|1056743_1057016_+	hypothetical protein	NA	NA	NA	NA	NA
QAU37141.1|1057052_1057316_+	hypothetical protein	NA	NA	NA	NA	NA
QAU37142.1|1057399_1057909_-	hypothetical protein	NA	NA	NA	NA	NA
QAU37143.1|1057911_1058334_-	hypothetical protein	NA	NA	NA	NA	NA
QAU37144.1|1058480_1058705_+	hypothetical protein	NA	NA	NA	NA	NA
QAU37145.1|1059379_1060591_-	hypothetical protein	NA	NA	NA	NA	NA
QAU37146.1|1061171_1062539_-	hypothetical protein	NA	NA	NA	NA	NA
QAU37147.1|1063513_1064767_+	hypothetical protein	NA	NA	NA	NA	NA
QAU37148.1|1064744_1065719_+	MoxR family ATPase	NA	NA	NA	NA	NA
QAU37149.1|1065715_1066693_+	hypothetical protein	NA	NA	NA	NA	NA
QAU37150.1|1066689_1069506_+	hypothetical protein	NA	NA	NA	NA	NA
QAU37151.1|1069889_1071485_-	hypothetical protein	NA	NA	NA	NA	NA
QAU37152.1|1071664_1076077_-	hypothetical protein	NA	NA	NA	NA	NA
QAU37153.1|1076196_1077783_-	hypothetical protein	NA	NA	NA	NA	NA
QAU37154.1|1078319_1079879_-	hypothetical protein	NA	NA	NA	NA	NA
QAU37155.1|1080350_1081646_+	DUF4071 domain-containing protein	NA	NA	NA	NA	NA
QAU37156.1|1081680_1082853_+	patatin	NA	NA	NA	NA	NA
QAU37157.1|1082882_1083461_-	hypothetical protein	NA	NA	NA	NA	NA
QAU37158.1|1083636_1083804_-	hypothetical protein	NA	NA	NA	NA	NA
QAU37159.1|1084129_1085182_+	hypothetical protein	NA	NA	NA	NA	NA
QAU37160.1|1085660_1086847_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.2	5.2e-46
>prophage 2
CP030051	Bradyrhizobium guangdongense strain CCBAU 51649 chromosome, complete genome	7456045	4224278	4233300	7456045	tRNA	uncultured_Mediterranean_phage(87.5%)	11	NA	NA
QAU39740.1|4224278_4225643_-	peptidoglycan-binding LysM	NA	Q8SBN9	Clostridium_phage	40.9	4.0e-18
QAU39741.1|4225752_4226403_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	48.8	2.3e-27
QAU42820.1|4226609_4226981_+	response regulator	NA	NA	NA	NA	NA
QAU39742.1|4226984_4227752_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	38.4	3.7e-37
QAU39743.1|4227886_4228249_-	hypothetical protein	NA	NA	NA	NA	NA
QAU39744.1|4228340_4229672_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.2	1.7e-98
QAU39745.1|4229876_4230689_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	48.8	9.3e-55
QAU39746.1|4230685_4231210_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
QAU39747.1|4231298_4231532_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	63.6	7.1e-08
QAU39748.1|4231698_4232460_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	49.7	4.1e-44
QAU39749.1|4232460_4233300_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	37.1	2.0e-31
>prophage 3
CP030051	Bradyrhizobium guangdongense strain CCBAU 51649 chromosome, complete genome	7456045	5476133	5485294	7456045		Escherichia_phage(42.86%)	8	NA	NA
QAU40800.1|5476133_5477828_-	chemotaxis protein	NA	A0A1B0V854	Salmonella_phage	41.9	5.9e-35
QAU40801.1|5478063_5479755_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	53.1	3.0e-15
QAU40802.1|5479924_5481202_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	41.6	4.5e-72
QAU40803.1|5481198_5481981_-	hydroxypyruvate isomerase	NA	NA	NA	NA	NA
QAU40804.1|5481994_5482912_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	48.6	3.7e-68
QAU42926.1|5483002_5483704_+	aldolase	NA	A0A077SK32	Escherichia_phage	48.8	1.8e-46
QAU40805.1|5483874_5484579_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.2	3.4e-13
QAU40806.1|5484562_5485294_-	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	29.1	3.0e-12
>prophage 1
CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	981946	140563	173703	981946	integrase,transposase	Enterobacteria_phage(22.22%)	21	134725:134752	146869:146896
134725:134752	attL	CTGAGCTGCTGCCGGTTTGATGGACACC	NA	NA	NA	NA
QAU43210.1|140563_141757_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
QAU43211.1|141766_142669_-|integrase	integrase	integrase	S5W9T9	Leptospira_phage	35.1	2.9e-33
QAU43212.1|148396_149641_+|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	33.9	4.5e-40
146869:146896	attR	GGTGTCCATCAAACCGGCAGCAGCTCAG	NA	NA	NA	NA
QAU43213.1|149640_150438_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	48.0	5.3e-63
QAU43214.1|151177_151999_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
QAU43215.1|152199_153738_+	malonyl-CoA synthase	NA	A0A2H4PQM9	Staphylococcus_phage	26.3	9.1e-27
QAU43216.1|153771_155160_+	amidase	NA	NA	NA	NA	NA
QAU43217.1|155459_156134_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
QAU43218.1|157011_157629_+	cysteine hydrolase	NA	NA	NA	NA	NA
QAU43219.1|157889_159212_+	CapA family protein	NA	NA	NA	NA	NA
QAU43220.1|159384_160487_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	26.8	3.6e-09
QAU43823.1|160967_161567_-	YecA family protein	NA	NA	NA	NA	NA
QAU43221.1|161614_162160_-	hypothetical protein	NA	A0A218MNE7	uncultured_virus	37.4	6.3e-23
QAU43222.1|162162_162762_-	hypothetical protein	NA	NA	NA	NA	NA
QAU43223.1|163287_164913_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QAU43224.1|164909_165887_+	ABC transporter permease	NA	NA	NA	NA	NA
QAU43225.1|165883_166804_+	ABC transporter permease	NA	NA	NA	NA	NA
QAU43226.1|166803_168546_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.7	2.2e-21
QAU43227.1|170114_170927_-	hypothetical protein	NA	A0A059NT77	Lactococcus_phage	35.1	8.5e-32
QAU43228.1|170923_172393_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
QAU43824.1|172674_173703_-|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	30.4	1.9e-20
>prophage 2
CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	981946	188534	267975	981946	integrase,transposase	Acidithiobacillus_phage(18.75%)	50	172388:172447	252899:254303
172388:172447	attL	CTTCATGTAGAGCCTTCTGTGGTTGCCGCCCGCAATGCAAGAAGTTTCTGACCCTTTGGC	NA	NA	NA	NA
QAU43235.1|188534_190049_+|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
QAU43236.1|191832_192423_-	YecA family protein	NA	NA	NA	NA	NA
QAU43237.1|194060_194414_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	45.1	3.3e-17
QAU43238.1|194410_194842_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
QAU43239.1|195298_195517_+	hypothetical protein	NA	NA	NA	NA	NA
QAU43240.1|201541_201814_+	hypothetical protein	NA	NA	NA	NA	NA
QAU43241.1|202097_202445_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	49.1	4.0e-23
QAU43242.1|202515_202737_+	hypothetical protein	NA	NA	NA	NA	NA
QAU43243.1|204335_205256_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	52.8	2.4e-75
QAU43244.1|205526_205766_-	hypothetical protein	NA	NA	NA	NA	NA
QAU43245.1|205762_206956_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
QAU43246.1|206965_207868_-|integrase	integrase	integrase	S5W9T9	Leptospira_phage	35.1	2.9e-33
QAU43247.1|207956_208118_-	hypothetical protein	NA	NA	NA	NA	NA
QAU43248.1|208254_208566_+	hypothetical protein	NA	A0A0C5AJ30	Paenibacillus_phage	38.0	2.0e-05
QAU43249.1|208828_210133_+|transposase	IS110 family transposase	transposase	Q9JMN8	Wolbachia_phage	49.6	4.4e-115
QAU43250.1|210166_210823_+|transposase	IS3 family transposase	transposase	A0A1B3AZE5	Gordonia_phage	35.5	3.4e-23
QAU43251.1|212777_214049_-	hypothetical protein	NA	NA	NA	NA	NA
QAU43252.1|214147_214828_-	hypothetical protein	NA	NA	NA	NA	NA
QAU43253.1|215074_215719_+	hypothetical protein	NA	K4I413	Acidithiobacillus_phage	44.7	9.7e-47
QAU43825.1|215733_216495_+|transposase	transposase	transposase	K4HZD4	Acidithiobacillus_phage	53.3	1.7e-66
QAU43254.1|216870_217224_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
QAU43255.1|218823_220062_+|integrase	integrase	integrase	A0A0K2CP59	Brevibacillus_phage	30.2	8.4e-07
QAU43826.1|220980_221982_+|integrase	integrase	integrase	A0A2K9VH72	Gordonia_phage	26.9	1.6e-11
QAU43256.1|222887_224075_-	crotonyl-CoA carboxylase/reductase	NA	NA	NA	NA	NA
QAU43257.1|224682_226224_-	long-chain fatty acid--CoA ligase	NA	NA	NA	NA	NA
QAU43827.1|227941_229333_+	MATE family efflux transporter	NA	NA	NA	NA	NA
QAU43258.1|230510_230831_+	hypothetical protein	NA	NA	NA	NA	NA
QAU43259.1|232115_233144_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
QAU43260.1|233272_234025_-	hypothetical protein	NA	NA	NA	NA	NA
QAU43261.1|235315_236788_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
QAU43828.1|237069_238098_-|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	30.4	1.9e-20
QAU43262.1|239073_239409_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
QAU43263.1|240206_240932_+	hypothetical protein	NA	NA	NA	NA	NA
QAU43829.1|241377_242658_+	diaminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	24.1	8.1e-21
QAU43264.1|242802_242994_+	hypothetical protein	NA	NA	NA	NA	NA
QAU43265.1|243238_244324_-	uridylate kinase	NA	NA	NA	NA	NA
QAU43266.1|245586_247191_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA	NA
QAU43267.1|249709_249916_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	43.1	4.5e-06
QAU43268.1|250022_250223_+	hypothetical protein	NA	NA	NA	NA	NA
QAU43269.1|250622_251471_-	hypothetical protein	NA	A0A059NT77	Lactococcus_phage	34.5	1.2e-31
QAU43270.1|251431_252904_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
QAU43830.1|253185_254214_-|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	30.4	1.9e-20
QAU43271.1|258939_259251_+	hypothetical protein	NA	NA	NA	NA	NA
252899:254303	attR	CTTCATGTAGAGCCTTCTGTGGTTGCCGCCCGCAATGCAAGAAGTTTCTGACCCTTTGGCGTGTGATCGAGTGCGGTCTTCTGTCAGGCCTTCCTTTACGGCATTTTCAGAAGCCGCTGGCCGGTATGGTGATCCGCGGACCAGGTCCAATTCTCATCTCCGAGCACGTCGGCTCTTTGGCTCTAGCTGGTTTCCTGATCCAGATCTGTTCGATCGTTGCGCCCATTCGGGTCGTCGCCTTCTCACACCCCCTTCGCCAACGTCAGGCTATTTCGTGCTGCATGCAGTCATGCCGTCACTGCCTGCGCTGGGTTCCGATAATCCTCCTTCCGGGTGAGCATGGCCCAAATCGTCCGAGCCATCTTGTTCGCCAAGGCGATCGCCACAAGCATGCGCGGCTTCCTCGCCAGCATCTGCGCCAGCCAGGATCCGCTAGGGATCGACTTGCGCCCGAGCCAGTTCAGCCGCGACATCGCCCCAACGATGAGCAACTGGCGAATGTCCGCCTGTCCTTCCTTCGAAACGCGTCCGAGCCTTTCCTTTCCCCCTGAGGAATGTTGCCGTGGGACCAAGCCGAGCCAAGCCGCGAAGTCTCGGCCACGTCGAAAGGCCGCCATGTCGGGCGCGAAAGCCTCGATCGCGAGTGCGGTCAGCGGGCCGACCCCCGGCATTGTCTGCAGCCGCTGCGCCGTGACCGTCCGCGTCGCCAACTTCTTGAGCTGCTCTGCCTTGGCATCGATCCGCTCCGTCTTGTAGGCGATCTGATCAATGAGACTCCGACATTCCTCGCGGACCAGTTCTGGTAGATCGCTGTTCGGATCTTCGAGGATTGCGTCAATGCGTTTAAGTTGTTCGATTCCTTGCGGGATGATATGGCCGAATTCGTAGAGAACAGAACGCAGCGCATTCACCAGATCGGTGCGCTGATGAACAAGGCGCTTCCGAGCCCGAAAGAGCACTGCCCTGGCCTGCTGTTCTTCCGATTTCGGCTCGACGAAGCGCATCTCGGGGCGCTGTGCCGCGATCACGATTGCTTCGGCATCAGCCGCGTCGTTCTTTTGGCGTTTCACAAAAGGCTTCACATATTGCGGAGCGATCAGTTTCACTTCATGGCCGAGCTTGACCATCTCCCGTGCCCAATAGTGGGCGCTGCCACAGGCTTCCATCACCACCACTGCCGATGGGTGGCCCGCCATGAACTTCCGAAACTGAAGCCGCGACAGTTTCTTTCGAAATTTCAAGTGTCCCGCCATTGACGCCCCGTGGAGCTGAAACACATTCTTGGCTAGATCCACTCCGATCACCGTATCCATCAATTTGCCGTCCTCTTCGCTTCGGGGTTCAAACACTGCGTTCTTGGCACATTACGATGCCGTCTGGGGAGGGCGGCAACCATCCCATCTCA	NA	NA	NA	NA
QAU43272.1|259259_260297_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
QAU43273.1|260514_261441_+	hypothetical protein	NA	NA	NA	NA	NA
QAU43274.1|262392_262596_-	hypothetical protein	NA	NA	NA	NA	NA
QAU43275.1|262882_263596_+	hypothetical protein	NA	NA	NA	NA	NA
QAU43276.1|263903_264284_-	response regulator	NA	NA	NA	NA	NA
QAU43831.1|264340_265000_-	DNA-binding response regulator	NA	NA	NA	NA	NA
QAU43277.1|266586_267975_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	981946	951331	958349	981946		Pseudomonas_phage(42.86%)	7	NA	NA
QAU43793.1|951331_952585_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	30.0	1.5e-27
QAU43794.1|953991_954186_-	hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	58.7	1.8e-09
QAU43889.1|954219_955446_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	29.7	1.1e-27
QAU43795.1|956007_956226_-	hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	50.0	7.6e-12
QAU43796.1|956222_956624_-	IS66 family insertion sequence hypothetical protein	NA	A0A1B0YZU7	Pseudomonas_phage	56.5	5.1e-06
QAU43797.1|956920_957622_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.5	4.5e-13
QAU43798.1|957614_958349_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.1	4.8e-10
