The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP032700	Streptococcus pyogenes strain TSPY556 chromosome, complete genome	1828132	36638	49013	1828132		Synechococcus_phage(28.57%)	8	NA	NA
QAX73685.1|36638_40364_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.2	1.2e-40
QAX73686.1|40587_42042_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.1	1.1e-53
QAX73687.1|42069_43092_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	41.4	3.1e-63
QAX73688.1|43259_43814_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	5.2e-25
QAX73689.1|43997_45545_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	E3SNU8	Prochlorococcus_phage	52.4	4.4e-45
QAX73690.1|45601_46726_-	CHAP domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
QAX73691.1|46978_48244_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
QAX73692.1|48521_49013_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	43.1	1.4e-18
>prophage 2
CP032700	Streptococcus pyogenes strain TSPY556 chromosome, complete genome	1828132	608401	668892	1828132	holin,tRNA,integrase,portal,terminase,protease,capsid,tail	Streptococcus_phage(63.16%)	74	630718:630737	665434:665453
QAX74184.1|608401_611203_+|tRNA	isoleucine--tRNA ligase	tRNA	H2EEZ0	Moumouvirus	26.9	5.5e-70
QAX74185.1|611467_611770_-	DUF1827 family protein	NA	NA	NA	NA	NA
QAX74186.1|611820_612276_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
QAX74187.1|612403_614686_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A2C9CYX3	Yersinia_phage	39.6	1.1e-124
QAX74188.1|614983_615214_+	DUF1797 family protein	NA	NA	NA	NA	NA
QAX74189.1|615341_616028_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
QAX74190.1|616027_616762_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	8.2e-34
QAX74191.1|616910_618320_+	deoxyribodipyrimidine photo-lyase	NA	A0A1V0SGL1	Hokovirus	32.8	9.8e-60
QAX74192.1|618497_620192_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	42.4	1.6e-128
QAX74193.1|620399_621254_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	39.4	2.6e-39
QAX74194.1|621406_622747_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SIT1	Klosneuvirus	30.9	8.2e-40
QAX74195.1|622724_622940_+	exodeoxyribonuclease 7 small subunit	NA	NA	NA	NA	NA
QAX74196.1|622939_623812_+	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
QAX74197.1|623804_624632_+	TlyA family RNA methyltransferase	NA	NA	NA	NA	NA
QAX74198.1|624618_625089_+	ArgR family transcriptional regulator	NA	NA	NA	NA	NA
QAX74199.1|625110_626772_+	DNA repair protein RecN	NA	NA	NA	NA	NA
QAX74200.1|626943_627894_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
QAX75308.1|628121_628961_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	35.7	7.0e-13
QAX74201.1|628935_629796_+	GDSL family lipase	NA	NA	NA	NA	NA
QAX74202.1|629773_630361_+	DUF2140 family protein	NA	NA	NA	NA	NA
QAX74203.1|630459_630735_+	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.0	2.6e-25
630718:630737	attL	AAAGACGCTGTTAAATAATT	NA	NA	NA	NA
QAX74204.1|630823_631966_-|integrase	site-specific integrase	integrase	M1NRJ9	Streptococcus_phage	77.4	2.4e-173
QAX74205.1|632089_632608_-	restriction endonuclease	NA	E8ZDN5	Streptococcus_phage	45.9	9.2e-32
QAX74206.1|632619_633375_-	XRE family transcriptional regulator	NA	A0A1S5S8S8	Streptococcus_phage	60.8	2.8e-77
QAX74207.1|633576_633789_+	XRE family transcriptional regulator	NA	A0A1X9I583	Streptococcus_phage	56.7	1.1e-10
QAX74208.1|634058_634370_+	excisionase	NA	A0A1S5SA25	Streptococcus_phage	77.7	5.3e-43
QAX74209.1|634371_634557_+	hypothetical protein	NA	Q938N3	Temperate_phage	83.6	1.3e-20
QAX74210.1|634665_634920_+	transcriptional regulator	NA	A0A1S5S9Z1	Streptococcus_phage	41.3	7.7e-08
QAX74211.1|635060_635447_+	DnaD domain protein	NA	Q938N2	Temperate_phage	51.9	8.1e-25
QAX74212.1|635427_635661_+	hypothetical protein	NA	Q938N1	Temperate_phage	96.1	2.8e-36
QAX74213.1|635657_635798_+	hypothetical protein	NA	A0A1X9I6Y1	Streptococcus_phage	54.5	3.4e-05
QAX74214.1|635806_636013_+	hypothetical protein	NA	NA	NA	NA	NA
QAX74215.1|636401_637328_+	recombinase RecT	NA	M1NRN6	Streptococcus_phage	71.8	1.2e-90
QAX74216.1|637324_637525_+	hypothetical protein	NA	NA	NA	NA	NA
QAX74217.1|637517_638315_+	hypothetical protein	NA	J7KGZ1	Streptococcus_phage	83.8	1.3e-130
QAX74218.1|638679_639075_+	hypothetical protein	NA	A8ATL9	Listeria_phage	52.3	1.4e-19
QAX74219.1|639071_640418_+	hypothetical protein	NA	A8ATM0	Listeria_phage	49.4	1.0e-122
QAX74220.1|640428_640761_+	hypothetical protein	NA	M1NS23	Streptococcus_phage	67.0	8.8e-36
QAX74221.1|640757_641270_+	hypothetical protein	NA	M1PFM2	Streptococcus_phage	85.9	1.7e-78
QAX74222.1|641305_641623_+	DUF1372 family protein	NA	A1EAD7	Streptococcus_phage	71.4	9.0e-30
QAX74223.1|641771_642023_+	hypothetical protein	NA	M1PF60	Streptococcus_phage	59.0	1.6e-18
QAX74224.1|642098_642518_+	DUF1492 domain-containing protein	NA	A0A1X9I5B5	Streptococcus_phage	79.1	1.9e-56
QAX74225.1|642625_642970_+	HNH endonuclease	NA	M1Q0W7	Streptococcus_phage	69.4	3.2e-41
QAX74226.1|643117_643474_+	hypothetical protein	NA	M1PRL3	Streptococcus_phage	57.8	2.4e-07
QAX74227.1|643470_644739_+|portal	phage portal protein	portal	M1PFL4	Streptococcus_phage	75.6	2.2e-188
QAX74228.1|644731_646225_+	hypothetical protein	NA	M1Q184	Streptococcus_phage	55.0	2.0e-87
QAX74229.1|646230_646455_+	hypothetical protein	NA	NA	NA	NA	NA
QAX74230.1|646676_646943_+	hypothetical protein	NA	Q938K9	Temperate_phage	95.5	6.4e-37
QAX74231.1|646944_647160_+	hypothetical protein	NA	M1IRA5	Streptococcus_phage	72.4	4.1e-26
QAX74232.1|647241_648657_+|terminase	terminase	terminase	A0A0B5A091	Streptococcus_phage	73.8	4.2e-212
QAX74233.1|648737_649199_+	DUF4355 domain-containing protein	NA	M1Q1L0	Streptococcus_phage	53.2	4.5e-38
QAX74234.1|649223_650135_+|capsid	phage major capsid protein	capsid	M1PFL0	Streptococcus_phage	67.0	2.9e-113
QAX74235.1|650134_650335_+	hypothetical protein	NA	NA	NA	NA	NA
QAX74236.1|650344_650767_+	hypothetical protein	NA	A0A0B5A2F6	Streptococcus_phage	67.2	8.2e-47
QAX74237.1|650726_651065_+	hypothetical protein	NA	A0A0B5A086	Streptococcus_phage	75.0	8.1e-45
QAX74238.1|651057_651294_+	hypothetical protein	NA	A0A1P8BMT2	Lactococcus_phage	66.7	2.5e-21
QAX74239.1|651294_651630_+	hypothetical protein	NA	A0A1P8BMR5	Lactococcus_phage	64.9	9.8e-35
QAX74240.1|651642_652236_+|tail	phage tail protein	tail	M1PKG8	Streptococcus_phage	62.5	1.1e-60
QAX74241.1|652246_652510_+	hypothetical protein	NA	A0A0B5A2F3	Streptococcus_phage	55.8	1.0e-18
QAX74242.1|652524_652896_+	hypothetical protein	NA	M1PL84	Streptococcus_phage	62.4	1.7e-35
QAX74243.1|652895_655259_+	hypothetical protein	NA	M1NRG5	Streptococcus_phage	50.2	2.1e-131
QAX74244.1|655255_655951_+	hypothetical protein	NA	A0A1B1P761	Bacillus_phage	32.2	4.7e-07
QAX74245.1|655947_657906_+	peptidase	NA	M1PKG3	Streptococcus_phage	48.7	3.4e-95
QAX74246.1|657905_659015_+	hyaluronoglucosaminidase	NA	A7J2A8	Streptococcus_phage	65.9	1.2e-113
QAX74247.1|659029_660811_+	hypothetical protein	NA	Q938J9	Temperate_phage	41.7	3.4e-73
QAX74248.1|660819_661248_+	DUF1617 family protein	NA	A3F661	Streptococcus_phage	92.9	2.8e-66
QAX74249.1|661250_661862_+	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	88.7	4.1e-79
QAX74250.1|661871_662327_+|holin	holin	holin	A0A0M4R3G6	Streptococcus_phage	81.5	2.3e-63
QAX74251.1|662444_663197_+	CHAP domain-containing protein	NA	A3F665	Streptococcus_phage	96.4	3.9e-140
QAX74252.1|663265_663973_-	exotoxin type C	NA	A0A097PAT7	Streptococcus_pyogenes_phage	27.1	3.9e-09
QAX74253.1|664083_664842_-	DNAse	NA	NA	NA	NA	NA
QAX74254.1|665081_665264_+	Paratox	NA	A3F673	Streptococcus_phage	81.7	2.0e-21
QAX74255.1|665794_667657_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	33.7	6.0e-89
665434:665453	attR	AAAGACGCTGTTAAATAATT	NA	NA	NA	NA
QAX74256.1|667956_668892_-	dihydroorotate oxidase	NA	A0A1V0SH91	Hokovirus	44.8	1.3e-65
>prophage 3
CP032700	Streptococcus pyogenes strain TSPY556 chromosome, complete genome	1828132	769827	792089	1828132	integrase	Streptococcus_phage(80.95%)	26	759288:759304	783628:783644
759288:759304	attL	TGACCTATCTTATAAAG	NA	NA	NA	NA
QAX74342.1|769827_770034_+	XRE family transcriptional regulator	NA	A0A2K5B261	Erysipelothrix_phage	54.4	3.2e-12
QAX74343.1|770056_771685_+	ATP-dependent endonuclease	NA	NA	NA	NA	NA
QAX75311.1|772522_772819_+	DNA recombinase	NA	A0A2K5B2B2	Erysipelothrix_phage	91.8	4.6e-44
QAX74344.1|772819_773236_+	recombinase	NA	A0A2K5B2B3	Erysipelothrix_phage	98.6	1.2e-71
QAX75312.1|773255_774800_+	recombinase family protein	NA	A0A2K5B2B4	Erysipelothrix_phage	88.3	9.8e-255
QAX74345.1|774942_775167_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QAX74346.1|775181_776051_+	nucleotidyltransferase domain-containing protein	NA	A0A1X9I6C9	Streptococcus_phage	90.7	6.7e-152
QAX74347.1|776031_776766_+	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
QAX74348.1|776798_777707_+	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
QAX74349.1|777703_778246_+	streptothricin N-acetyltransferase Sat4	NA	A0A1B0RXL7	Streptococcus_phage	100.0	8.9e-94
QAX74350.1|778338_779133_+	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
QAX74351.1|779765_779981_+	WYL domain-containing protein	NA	E4ZFP5	Streptococcus_phage	97.2	1.3e-32
QAX74352.1|779953_780361_+	WYL domain-containing protein	NA	A0A1B0RXM3	Streptococcus_phage	98.3	1.1e-59
QAX74353.1|781872_783090_-|integrase	site-specific integrase	integrase	A0A1S5SEW7	Streptococcus_phage	99.8	1.1e-232
QAX74354.1|783171_783375_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	98.5	4.4e-30
QAX74355.1|783358_783610_+	hypothetical protein	NA	NA	NA	NA	NA
QAX74356.1|783835_784066_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
783628:783644	attR	CTTTATAAGATAGGTCA	NA	NA	NA	NA
QAX74357.1|784062_784485_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	97.9	3.7e-71
QAX75313.1|784713_784785_-	hypothetical protein	NA	NA	NA	NA	NA
QAX74358.1|784989_785343_+	XRE family transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
QAX74359.1|785402_785588_-	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	67.9	3.9e-17
QAX74360.1|785688_787608_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.5	0.0e+00
QAX74361.1|787623_787710_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
QAX74362.1|787984_788917_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
QAX74363.1|788913_789915_-	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
QAX74364.1|789911_792089_-	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	99.9	0.0e+00
>prophage 4
CP032700	Streptococcus pyogenes strain TSPY556 chromosome, complete genome	1828132	1189272	1199875	1828132		Streptococcus_phage(57.14%)	9	NA	NA
QAX74729.1|1189272_1190415_-	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	27.3	1.4e-24
QAX74730.1|1190649_1191090_+	hypothetical protein	NA	NA	NA	NA	NA
QAX74731.1|1191119_1192388_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
QAX74732.1|1192475_1193828_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.7	2.3e-29
QAX74733.1|1194048_1194390_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	41.1	2.6e-19
QAX74734.1|1194450_1195617_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
QAX74735.1|1195710_1196397_-	3-dehydroquinase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
QAX74736.1|1196393_1197557_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	3.4e-143
QAX74737.1|1197664_1199875_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	68.9	6.5e-268
>prophage 5
CP032700	Streptococcus pyogenes strain TSPY556 chromosome, complete genome	1828132	1487492	1493528	1828132		Streptococcus_phage(100.0%)	8	NA	NA
QAX74986.1|1487492_1488320_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.8	5.4e-127
QAX74987.1|1488393_1488750_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.0	1.4e-39
QAX74988.1|1489049_1489679_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
QAX74989.1|1489725_1490118_-	hypothetical protein	NA	NA	NA	NA	NA
QAX74990.1|1490144_1491008_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	74.7	3.8e-115
QAX74991.1|1491012_1491336_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
QAX74992.1|1491999_1492875_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	46.2	4.2e-69
QAX74993.1|1492892_1493528_-	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	63.4	1.2e-65
