assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_004124015.1_ASM412401v1	CP032700	Streptococcus pyogenes strain TSPY556 chromosome, complete genome	1	569508-569870	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,csm6,DinG,csa3	 Type I-U?,Type I-U,Type I-C	GTCTCACCCTTCATGGGTGAGTGGATTGAAAT,GTCTCACCCTTCATGGGTGAGTGGATTGAAAT,GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	32,32,32	0	0	NA	NA	I-C:I-C:I-C	5,5,5	5	TypeI-U?,TypeI-U,TypeI-C	cas3,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,csm6,DinG,csa3	NA,NA	NA|132aa|up_9|CP032700.1_556975_557371_+	PRK07758, PRK07758, hypothetical protein; Provisional	NA|60aa|up_8|CP032700.1_557796_557976_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|883aa|up_7|CP032700.1_558537_561186_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	cas3|803aa|up_6|CP032700.1_561339_563748_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|243aa|up_5|CP032700.1_563880_564609_+	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas8c|632aa|up_4|CP032700.1_564608_566504_+	cd09642, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|283aa|up_3|CP032700.1_566508_567357_+	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas4|225aa|up_2|CP032700.1_567358_568033_+	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense    mechanisms]	cas1|342aa|up_1|CP032700.1_568029_569055_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|98aa|up_0|CP032700.1_569065_569359_+	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	NA|237aa|down_0|CP032700.1_570029_570740_+	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|208aa|down_1|CP032700.1_570752_571376_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|369aa|down_2|CP032700.1_571418_572525_+	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|247aa|down_3|CP032700.1_572612_573353_+	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|578aa|down_4|CP032700.1_573349_575083_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|360aa|down_5|CP032700.1_575155_576235_+	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|239aa|down_6|CP032700.1_576248_576965_+	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|158aa|down_7|CP032700.1_577130_577604_-	COG1438, ArgR, Arginine repressor [Transcription]	NA|227aa|down_8|CP032700.1_577745_578426_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|412aa|down_9|CP032700.1_578699_579935_+	PRK01388, PRK01388, arginine deiminase; Provisional
GCA_004124015.1_ASM412401v1	CP032700	Streptococcus pyogenes strain TSPY556 chromosome, complete genome	2	1049476-1049635	2	CRISPRCasFinder	no		cas3,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,csm6,DinG,csa3	Orphan	GTTTTGGGACCATTCAAAACAGCATAGC	28	0	0	NA	NA	II-A	2	2	Orphan	cas3,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,csm6,DinG,csa3	NA,NA|214aa|down_4|CP032700.1_1053112_1053754_-	NA|276aa|up_9|CP032700.1_1040972_1041800_-	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism]	NA|270aa|up_8|CP032700.1_1041796_1042606_-	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]	NA|164aa|up_7|CP032700.1_1042622_1043114_-	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]	NA|142aa|up_6|CP032700.1_1043132_1043558_-	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|340aa|up_5|CP032700.1_1043764_1044784_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|146aa|up_4|CP032700.1_1044913_1045351_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|399aa|up_3|CP032700.1_1045536_1046733_-	PHA03169, PHA03169, hypothetical protein; Provisional	NA|611aa|up_2|CP032700.1_1046999_1048832_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|67aa|up_1|CP032700.1_1048901_1049102_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|60aa|up_0|CP032700.1_1049165_1049345_-	cd04413, NDPk_I, Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside triphosphate (NTP) donor onto a nucleoside diphosphate (NDP) acceptor through a phosphohistidine intermediate	NA|211aa|down_0|CP032700.1_1049761_1050394_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|255aa|down_1|CP032700.1_1050393_1051158_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|251aa|down_2|CP032700.1_1051157_1051910_-	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|377aa|down_3|CP032700.1_1051919_1053050_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|214aa|down_4|CP032700.1_1053112_1053754_-	NA	NA|452aa|down_5|CP032700.1_1053877_1055233_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|319aa|down_6|CP032700.1_1055286_1056243_-	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_7|CP032700.1_1056239_1057091_-	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|446aa|down_8|CP032700.1_1057203_1058541_+	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|264aa|down_9|CP032700.1_1058540_1059332_+	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]
