assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_004124175.1_ASM412417v1	CP033352	Salmonella enterica subsp. enterica strain CFSA629 chromosome, complete genome	2	4279187-4281150	2,1,1,2,3	CRISPRCasFinder,CRT,PILER-CR,CRT,CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11	cas3,PD-DExK,RT,csa3,DEDDh,WYL,DinG,cas14j,cas2,cas1,cas6e,cas5,cas7,cse2gr11	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,GGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,28,29,29	2	2	4281105-4281137|4281090-4281121	CP033352.1_3442683-3442651|CP033352.1_3442683-3442652	I-E:I-E:I-E:I-E:I-E	30,31,32,31,30	32	TypeI-E	cas3,PD-DExK,RT,csa3,DEDDh,WYL,DinG,cas14j,cas2,cas1,cas6e,cas5,cas7,cse2gr11	NA,NA|75aa|down_6|CP033352.1_4289809_4290034_+	NA|254aa|up_9|CP033352.1_4271053_4271815_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|CP033352.1_4271795_4272845_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|CP033352.1_4272841_4273321_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|CP033352.1_4273320_4274031_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|CP033352.1_4274049_4274361_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|119aa|up_4|CP033352.1_4274551_4274908_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|CP033352.1_4274925_4275531_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|480aa|up_2|CP033352.1_4275517_4276957_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|CP033352.1_4276966_4277875_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|349aa|up_0|CP033352.1_4278125_4279172_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|CP033352.1_4281246_4281540_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|CP033352.1_4281539_4282460_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|CP033352.1_4282456_4283107_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|CP033352.1_4283088_4283835_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|353aa|down_4|CP033352.1_4283845_4284904_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|187aa|down_5|CP033352.1_4284917_4285478_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	NA|75aa|down_6|CP033352.1_4289809_4290034_+	NA	NA|318aa|down_7|CP033352.1_4290149_4291103_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|down_8|CP033352.1_4291190_4291925_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_9|CP033352.1_4292000_4293713_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
GCA_004124175.1_ASM412417v1	CP033352	Salmonella enterica subsp. enterica strain CFSA629 chromosome, complete genome	3	4297281-4298774	4,3,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11	cas3,PD-DExK,RT,csa3,DEDDh,WYL,DinG,cas14j,cas2,cas1,cas6e,cas5,cas7,cse2gr11	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	24,24,23	24	TypeI-E	cas3,PD-DExK,RT,csa3,DEDDh,WYL,DinG,cas14j,cas2,cas1,cas6e,cas5,cas7,cse2gr11	NA|75aa|up_7|CP033352.1_4289809_4290034_+,NA|57aa|up_2|CP033352.1_4295836_4296007_-,NA	cas7|353aa|up_9|CP033352.1_4283845_4284904_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|187aa|up_8|CP033352.1_4284917_4285478_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	NA|75aa|up_7|CP033352.1_4289809_4290034_+	NA	NA|318aa|up_6|CP033352.1_4290149_4291103_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|up_5|CP033352.1_4291190_4291925_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|up_4|CP033352.1_4292000_4293713_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|up_3|CP033352.1_4293712_4295512_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|57aa|up_2|CP033352.1_4295836_4296007_-	NA	NA|121aa|up_1|CP033352.1_4295935_4296298_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|266aa|up_0|CP033352.1_4296385_4297183_-	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|224aa|down_0|CP033352.1_4299070_4299742_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|433aa|down_1|CP033352.1_4299877_4301176_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_2|CP033352.1_4301258_4302896_-	PRK05380, pyrG, CTP synthetase; Validated	NA|267aa|down_3|CP033352.1_4303123_4303924_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|99aa|down_4|CP033352.1_4304691_4304988_-	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|119aa|down_5|CP033352.1_4304953_4305310_-	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription]	NA|745aa|down_6|CP033352.1_4305393_4307628_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|432aa|down_7|CP033352.1_4307679_4308975_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_8|CP033352.1_4309032_4311789_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|381aa|down_9|CP033352.1_4311832_4312975_-	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism]
