The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP035464	Bifidobacterium gallinarum strain CACC 514 chromosome CACC514, complete sequence	2405742	802479	841752	2405742	portal,tRNA,protease,capsid,head,terminase,transposase	Propionibacterium_phage(33.33%)	56	NA	NA
QAY32515.1|802479_802965_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
QAY32516.1|803061_804315_-	AGE family epimerase/isomerase	NA	NA	NA	NA	NA
QAY32517.1|804821_805853_+	DNA-processing protein DprA	NA	NA	NA	NA	NA
QAY32518.1|805842_806670_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32519.1|806949_807381_-	PH domain-containing protein	NA	A5GZ63	Lactococcus_phage	41.0	1.2e-21
QAY33810.1|807454_807850_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
QAY32520.1|807882_808773_-	KilA-N domain-containing protein	NA	Q4ZC41	Staphylococcus_virus	42.7	8.9e-59
QAY32521.1|808887_809247_-	hypothetical protein	NA	NA	NA	NA	NA
QAY32522.1|809377_809662_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32523.1|809828_810053_-	hypothetical protein	NA	NA	NA	NA	NA
QAY32524.1|810403_810643_-	hypothetical protein	NA	NA	NA	NA	NA
QAY32525.1|810735_811038_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32526.1|811037_811223_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32527.1|811495_812017_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32528.1|812016_812583_+	single-stranded DNA-binding protein	NA	A6N1Y1	Microbacterium_phage	63.9	3.2e-38
QAY32529.1|812593_812854_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32530.1|812844_813309_+	hypothetical protein	NA	A0A173G9J6	Propionibacterium_phage	34.7	6.6e-05
QAY32531.1|813305_813491_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32532.1|813508_813688_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32533.1|813684_814620_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QAY32534.1|814687_815056_+	hypothetical protein	NA	I3NLB9	Bifidobacterium_phage	39.0	2.3e-13
QAY32535.1|815052_815631_+	oligoribonuclease	NA	I3NLB8	Bifidobacterium_phage	40.8	1.4e-20
QAY32536.1|815627_815915_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32537.1|815911_816154_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32538.1|816150_816396_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32539.1|816814_817006_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32540.1|817002_817251_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32541.1|817587_817776_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32542.1|817854_818652_+	hypothetical protein	NA	I3NLB4	Bifidobacterium_phage	26.0	4.0e-18
QAY32543.1|818702_818972_+	BrnT family toxin	NA	NA	NA	NA	NA
QAY32544.1|818952_819207_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
QAY32545.1|819371_819836_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32546.1|819832_820159_+	hypothetical protein	NA	A0A1D8ETM7	Propionibacterium_phage	47.8	1.9e-19
QAY32547.1|820287_820650_+	hypothetical protein	NA	A6N1Z4	Microbacterium_phage	46.7	4.3e-20
QAY32548.1|820665_822252_+|terminase	terminase	terminase	A0A1D8ET78	Propionibacterium_phage	42.4	1.7e-105
QAY32549.1|822265_823666_+|portal	phage portal protein	portal	A0A222ZFM5	Arthrobacter_phage	33.2	1.6e-41
QAY32550.1|823662_824415_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4PIT6	Corynebacterium_phage	42.8	2.0e-27
QAY32551.1|824426_825632_+|capsid	phage major capsid protein	capsid	A0A1D8ETI2	Propionibacterium_phage	50.9	1.3e-100
QAY32552.1|825649_826180_+	hypothetical protein	NA	A0A1D8ETD3	Propionibacterium_phage	37.6	5.7e-21
QAY32553.1|826176_826578_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32554.1|826577_826886_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
QAY32555.1|826882_827302_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32556.1|827311_827887_+	hypothetical protein	NA	A0A1D8ETI9	Propionibacterium_phage	40.8	2.9e-34
QAY32557.1|827862_828165_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32558.1|828248_828620_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32559.1|828724_828931_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32560.1|828943_832600_+	hypothetical protein	NA	A0A0S2SXL7	Bacillus_phage	31.0	2.6e-32
QAY32561.1|832621_833575_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32562.1|833574_837348_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32563.1|837363_837873_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32564.1|837882_838065_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32565.1|838250_838622_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32566.1|838724_839162_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32567.1|839178_839727_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32568.1|839867_840455_+|transposase	IS607 family transposase	transposase	F9VHY9	Thermus_phage	37.6	2.8e-24
QAY32569.1|840447_841752_+|transposase	transposase	transposase	A0A7P9	Microcystis_virus	33.8	3.1e-36
>prophage 2
CP035464	Bifidobacterium gallinarum strain CACC 514 chromosome CACC514, complete sequence	2405742	1174821	1214646	2405742	portal,integrase,capsid,holin,tail,terminase	Mycobacterium_phage(27.27%)	55	1174758:1174787	1214902:1214931
1174758:1174787	attL	TCTGTGTCCGGAGCGGGACTTGAACCCGCA	NA	NA	NA	NA
QAY32794.1|1174821_1175970_-|integrase	site-specific integrase	integrase	A0A0E3XBN7	Gordonia_phage	40.7	9.7e-66
QAY32795.1|1176116_1176686_+	hypothetical protein	NA	NA	NA	NA	NA
QAY33850.1|1176825_1177218_-	ImmA/IrrE family metallo-endopeptidase	NA	I3NLD5	Bifidobacterium_phage	40.0	4.7e-20
QAY32796.1|1177250_1178111_-	KilA-N domain-containing protein	NA	Q4ZC41	Staphylococcus_virus	46.1	1.1e-69
QAY32797.1|1178415_1178904_-	hypothetical protein	NA	NA	NA	NA	NA
QAY32798.1|1179046_1179709_-	hypothetical protein	NA	NA	NA	NA	NA
QAY32799.1|1179919_1180531_-	hypothetical protein	NA	NA	NA	NA	NA
QAY32800.1|1180647_1180908_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32801.1|1180921_1181188_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32802.1|1181180_1181699_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32803.1|1181695_1181920_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32804.1|1181916_1182156_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32805.1|1182279_1182633_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32806.1|1182629_1182902_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32807.1|1182898_1183393_+	RusA family crossover junction endodeoxyribonuclease	NA	K4NWZ9	Pseudomonas_phage	35.8	1.6e-09
QAY32808.1|1183389_1183788_+	hypothetical protein	NA	NA	NA	NA	NA
QAY33851.1|1184001_1184370_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32809.1|1184366_1184552_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32810.1|1185521_1186370_+	hypothetical protein	NA	A0A222ZMM7	Mycobacterium_phage	37.0	2.5e-18
QAY32811.1|1186453_1188694_+	CopY family transcriptional regulator	NA	NA	NA	NA	NA
QAY32812.1|1188896_1189097_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32813.1|1189083_1189323_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32814.1|1189326_1189782_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32815.1|1189778_1189967_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32816.1|1190242_1191022_+	hypothetical protein	NA	NA	NA	NA	NA
QAY33852.1|1191390_1191876_+	DUF4145 domain-containing protein	NA	NA	NA	NA	NA
QAY32817.1|1191924_1192116_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32818.1|1192099_1192450_+	HNH endonuclease	NA	NA	NA	NA	NA
QAY32819.1|1192653_1192836_+	hypothetical protein	NA	NA	NA	NA	NA
QAY33853.1|1192840_1194271_+|terminase	terminase	terminase	V5R8Y1	Arthrobacter_phage	39.6	8.6e-88
QAY32820.1|1194261_1195719_+|portal	phage portal protein	portal	A0A068F3B8	Mycobacterium_phage	36.0	6.3e-62
QAY32821.1|1195684_1197022_+	hypothetical protein	NA	NA	NA	NA	NA
QAY33854.1|1197257_1197752_+	helicase	NA	NA	NA	NA	NA
QAY32822.1|1197773_1198661_+|capsid	phage major capsid protein	capsid	A0A2H4IYA3	uncultured_Caudovirales_phage	34.6	1.3e-33
QAY32823.1|1198657_1199089_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32824.1|1199100_1199562_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32825.1|1199558_1199903_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32826.1|1199909_1200200_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32827.1|1200196_1200565_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32828.1|1200578_1201193_+	hypothetical protein	NA	A0A222ZR64	Mycobacterium_phage	32.4	1.5e-09
QAY32829.1|1201189_1201543_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32830.1|1201539_1201992_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32831.1|1201996_1204279_+|tail	phage tail protein	tail	A0A1P8BLF5	Lactococcus_phage	40.1	3.6e-72
QAY32832.1|1204300_1205248_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32833.1|1205251_1209016_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32834.1|1209030_1209540_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32835.1|1209549_1209732_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32836.1|1209821_1210331_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32837.1|1210430_1210868_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32838.1|1210884_1211406_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32839.1|1211402_1211822_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32840.1|1211850_1212324_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32841.1|1212443_1212776_+	hypothetical protein	NA	NA	NA	NA	NA
QAY32842.1|1212920_1214186_+	LysM peptidoglycan-binding domain-containing protein	NA	Q8LTJ6	Lactococcus_phage	42.0	2.2e-39
QAY33855.1|1214406_1214646_+|holin	holin	holin	NA	NA	NA	NA
1214902:1214931	attR	TCTGTGTCCGGAGCGGGACTTGAACCCGCA	NA	NA	NA	NA
>prophage 3
CP035464	Bifidobacterium gallinarum strain CACC 514 chromosome CACC514, complete sequence	2405742	1644345	1689914	2405742	protease,transposase	Bacillus_phage(16.67%)	32	NA	NA
QAY33217.1|1644345_1645707_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	37.6	1.0e-45
QAY33218.1|1645786_1646974_-|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	37.5	1.2e-58
QAY33219.1|1647245_1647533_+	toxin	NA	NA	NA	NA	NA
QAY33220.1|1647504_1647810_+	addiction module antidote protein, HigA family	NA	NA	NA	NA	NA
QAY33221.1|1647827_1648742_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
QAY33222.1|1648738_1649869_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	38.7	1.5e-39
QAY33223.1|1649877_1650573_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QAY33897.1|1650699_1651191_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QAY33224.1|1651187_1651556_+	DUF86 domain-containing protein	NA	NA	NA	NA	NA
QAY33225.1|1651724_1652714_-	hypothetical protein	NA	NA	NA	NA	NA
QAY33226.1|1652777_1653635_-	hypothetical protein	NA	NA	NA	NA	NA
QAY33227.1|1653648_1655229_-	hypothetical protein	NA	NA	NA	NA	NA
QAY33228.1|1655308_1658527_-	DUF3427 domain-containing protein	NA	U3PFS7	Lactobacillus_phage	28.5	2.3e-24
QAY33898.1|1658523_1658970_-	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
QAY33229.1|1659063_1660254_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA	NA
QAY33230.1|1660548_1660812_+	hypothetical protein	NA	NA	NA	NA	NA
QAY33231.1|1661010_1662477_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
QAY33232.1|1662473_1663238_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	38.4	9.1e-36
QAY33233.1|1664386_1665700_+|transposase	transposase	transposase	NA	NA	NA	NA
QAY33234.1|1665914_1666220_+	hypothetical protein	NA	NA	NA	NA	NA
QAY33235.1|1666952_1668401_-	hypothetical protein	NA	NA	NA	NA	NA
QAY33899.1|1668464_1670711_-|protease	BREX system Lon protease-like protein BrxL	protease	NA	NA	NA	NA
QAY33236.1|1670741_1673351_-	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA	NA
QAY33237.1|1673347_1674976_-	ATP-binding protein	NA	NA	NA	NA	NA
QAY33238.1|1675063_1676842_-	hypothetical protein	NA	NA	NA	NA	NA
QAY33239.1|1676838_1680435_-	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA	NA
QAY33240.1|1680431_1684097_-	BREX system P-loop protein BrxC	NA	NA	NA	NA	NA
QAY33241.1|1684157_1684868_-	DUF1788 domain-containing protein	NA	NA	NA	NA	NA
QAY33242.1|1684903_1685605_-	DUF1819 family protein	NA	NA	NA	NA	NA
QAY33243.1|1685773_1687102_+	hypothetical protein	NA	NA	NA	NA	NA
QAY33244.1|1687565_1688318_-	ATP-binding protein	NA	A0A0D4DBZ2	Acinetobacter_phage	24.6	2.5e-06
QAY33245.1|1688324_1689914_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP035464	Bifidobacterium gallinarum strain CACC 514 chromosome CACC514, complete sequence	2405742	2181443	2189694	2405742		Bacillus_virus(16.67%)	9	NA	NA
QAY33609.1|2181443_2182766_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	34.0	2.8e-48
QAY33610.1|2182897_2183911_+	L-glyceraldehyde 3-phosphate reductase	NA	A0A1V0SKP9	Klosneuvirus	28.9	1.7e-05
QAY33611.1|2184090_2184393_-	DUF3039 domain-containing protein	NA	A0A2R4A1S7	Microbacterium_phage	42.5	6.8e-11
QAY33612.1|2184542_2185037_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	38.5	3.1e-21
QAY33613.1|2185033_2185705_+	cell division protein	NA	NA	NA	NA	NA
QAY33614.1|2185709_2186312_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
QAY33615.1|2186398_2186593_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
QAY33616.1|2186796_2187585_+	ribonuclease III	NA	A0A1V0SDK0	Indivirus	33.7	1.2e-17
QAY33617.1|2187747_2189694_+	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	31.4	1.1e-61
