The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025234	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 chromosome, complete genome	4830646	1227974	1304732	4830646	integrase,capsid,transposase,protease,head,holin,portal,terminase,tRNA,tail,lysis	Salmonella_phage(37.93%)	94	1220055:1220071	1310579:1310595
1220055:1220071	attL	CGCCTTATCCGGCCTAC	NA	NA	NA	NA
QAZ12953.1|1227974_1229012_+|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
QAZ12954.1|1229127_1229817_-	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	49.5	4.6e-55
QAZ12955.1|1230135_1230519_+	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	74.0	6.1e-33
QAZ12956.1|1230580_1231168_-	cysteine/O-acetylserine efflux protein	NA	NA	NA	NA	NA
QAZ16380.1|1231270_1232170_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAZ12957.1|1232187_1233522_-	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	29.7	1.6e-43
QAZ12958.1|1233651_1234389_+|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	tRNA	NA	NA	NA	NA
QAZ12959.1|1234373_1235996_-	L-aspartate oxidase	NA	NA	NA	NA	NA
QAZ12960.1|1236080_1236260_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ12961.1|1236420_1236996_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
QAZ12962.1|1237027_1237678_+	anti-sigma-E factor RseA	NA	NA	NA	NA	NA
QAZ12963.1|1237677_1238634_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA	NA
QAZ12964.1|1238630_1239110_+	SoxR reducing system protein RseC	NA	NA	NA	NA	NA
QAZ12965.1|1239139_1239256_+	transcriptional regulator	NA	NA	NA	NA	NA
QAZ12966.1|1239607_1240837_+|integrase	integrase	integrase	H6WRW7	Salmonella_phage	94.1	4.9e-233
QAZ12967.1|1240814_1241099_-	excisionase	NA	H6WRW8	Salmonella_phage	86.2	3.1e-42
QAZ12968.1|1241139_1241379_-	DUF4060 domain-containing protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
QAZ12969.1|1241421_1242579_-	enterohemolysin	NA	S4TTE8	Salmonella_phage	99.5	3.9e-216
QAZ12970.1|1242541_1245469_-	exodeoxyribonuclease	NA	S4TNL0	Salmonella_phage	99.2	0.0e+00
QAZ12971.1|1245595_1245946_-	DNA breaking-rejoining protein	NA	S4TSN6	Salmonella_phage	97.4	1.1e-60
QAZ12972.1|1245967_1246126_-	hypothetical protein	NA	H6WRX3	Salmonella_phage	98.1	9.0e-23
QAZ12973.1|1246582_1247245_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ12974.1|1247244_1247631_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ12975.1|1247623_1248463_-	chromosome partitioning protein ParA	NA	A0A1X9IGI7	Lactococcus_phage	33.3	1.5e-31
QAZ12976.1|1248521_1248917_-	transcriptional regulator	NA	K7PM35	Enterobacteria_phage	61.4	1.9e-37
QAZ12977.1|1249016_1249259_+	Rha family transcriptional regulator	NA	A0A0M4QX15	Salmonella_phage	64.1	2.1e-23
QAZ12978.1|1249218_1249593_+	hypothetical protein	NA	S4TTD7	Salmonella_phage	98.4	1.9e-63
QAZ12979.1|1249684_1250569_+	replication protein	NA	K7PGT1	Enterobacteria_phage	47.2	1.3e-46
QAZ12980.1|1250565_1251261_+	phage replication protein	NA	G8C7U6	Escherichia_phage	45.4	2.1e-55
QAZ12981.1|1251274_1251973_+	DUF550 domain-containing protein	NA	A0A0M4RTV1	Salmonella_phage	85.7	2.1e-63
QAZ12982.1|1252080_1252713_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ12983.1|1252955_1253189_+	DinI family protein	NA	H6WRY5	Salmonella_phage	100.0	5.6e-37
QAZ12984.1|1253305_1253554_+	hypothetical protein	NA	A0A0U2C0C8	Salmonella_phage	100.0	1.6e-42
QAZ12985.1|1253588_1254191_+	hypothetical protein	NA	S4TTI0	Salmonella_phage	99.0	2.8e-109
QAZ12986.1|1254190_1254397_+	hypothetical protein	NA	S4TNP0	Salmonella_phage	97.1	1.7e-34
QAZ12987.1|1254399_1255011_+	protein NinG	NA	A0A0M4RU10	Salmonella_phage	98.5	1.8e-90
QAZ12988.1|1255007_1255148_+	hypothetical protein	NA	A0A0M5M7B2	Salmonella_phage	78.9	7.2e-08
QAZ12989.1|1255144_1255822_+	antiterminator	NA	I6PDF8	Cronobacter_phage	54.0	7.7e-63
QAZ12990.1|1255818_1256004_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ12991.1|1256094_1256658_+	hypothetical protein	NA	A0A0P0ZC44	Stx2-converting_phage	92.2	7.6e-56
QAZ12992.1|1257164_1257353_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ12993.1|1257567_1258254_-|protease	type III secretion system effector protease GogA	protease	Q9MBM2	Phage_Gifsy-1	100.0	9.4e-133
QAZ16381.1|1258529_1258859_+|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
QAZ12994.1|1258842_1259295_+	lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	5.1e-79
QAZ16382.1|1259312_1259765_+|lysis	lysis protein	lysis	A0A0M4RD57	Salmonella_phage	92.7	2.9e-66
QAZ12995.1|1260000_1260402_-	inhibitor of g-type lysozyme	NA	NA	NA	NA	NA
QAZ12996.1|1260436_1260631_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ12997.1|1260688_1261234_+|terminase	terminase small subunit	terminase	A0A0U2S671	Escherichia_phage	80.6	1.5e-56
QAZ12998.1|1261205_1263137_+|terminase	terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	65.7	6.3e-259
QAZ12999.1|1263120_1263324_+|tail	phage tail protein	tail	K7PM10	Enterobacteria_phage	73.8	1.9e-17
QAZ13000.1|1263320_1264901_+|portal	phage portal protein	portal	K7P6U7	Enterobacteria_phage	62.8	9.6e-189
QAZ13001.1|1264890_1266387_+	scaffolding protein	NA	A0A0K2FI53	Enterobacteria_phage	52.2	8.1e-97
QAZ13002.1|1266399_1266747_+|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	52.7	9.2e-20
QAZ13003.1|1266801_1267830_+|capsid	minor capsid protein E	capsid	C6ZCY2	Enterobacteria_phage	61.1	1.7e-114
QAZ13004.1|1267887_1268247_+	DNA packaging protein	NA	NA	NA	NA	NA
QAZ13005.1|1268257_1268641_+|tail	phage tail protein	tail	A0A0K2FJB7	Enterobacteria_phage	55.6	9.2e-29
QAZ13006.1|1268668_1269247_+|tail	phage tail protein	tail	A5LH33	Enterobacteria_phage	80.2	3.7e-82
QAZ13007.1|1269295_1270546_-|transposase	transposase	transposase	Q9G0F2	Phage_Gifsy-1	100.0	7.8e-218
QAZ13008.1|1270534_1270936_+|tail	phage tail protein	tail	Q9G0F3	Phage_Gifsy-1	100.0	8.1e-52
QAZ13009.1|1270943_1271690_+|tail	phage tail protein	tail	A0A291AWU6	Escherichia_phage	76.9	1.9e-99
QAZ13010.1|1271740_1272136_+|tail	phage minor tail protein G	tail	A5LH36	Enterobacteria_phage	56.5	2.3e-30
QAZ13011.1|1272132_1272471_+|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	62.4	1.3e-31
QAZ13012.1|1272442_1275538_+|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	62.3	6.1e-280
QAZ13013.1|1275540_1275870_+|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	70.4	1.3e-42
QAZ13014.1|1275879_1276578_+|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	76.3	5.5e-104
QAZ13015.1|1276584_1277322_+|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	85.0	5.2e-129
QAZ13016.1|1277219_1277867_+|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	77.7	2.1e-89
QAZ13017.1|1277928_1281291_+	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	79.7	0.0e+00
QAZ13018.1|1281329_1281572_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ13019.1|1281625_1283998_+|tail	phage tail protein	tail	A0A0K2FIZ6	Escherichia_phage	65.6	1.1e-90
QAZ13020.1|1283994_1284819_+|tail	phage tail protein	tail	A0A0M4QWS3	Salmonella_phage	92.0	1.2e-145
QAZ13021.1|1284808_1285387_+|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	88.9	3.6e-93
QAZ13022.1|1285483_1285711_-	phage virulence factor	NA	NA	NA	NA	NA
QAZ13023.1|1285817_1286030_+	hypothetical protein	NA	S4TTF2	Salmonella_phage	90.6	3.8e-08
QAZ16383.1|1286092_1286158_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ13024.1|1286822_1287368_-|transposase	transposase	transposase	NA	NA	NA	NA
QAZ13025.1|1287614_1287752_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ13026.1|1288254_1289748_-	type III secretion system protein	NA	Q9MBM1	Phage_Gifsy-1	100.0	3.4e-260
QAZ13027.1|1290152_1291952_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.9	7.2e-23
QAZ13028.1|1291968_1292943_+	S26 family signal peptidase	NA	NA	NA	NA	NA
QAZ13029.1|1293216_1293897_+	ribonuclease 3	NA	A0A2K9L5P0	Tupanvirus	31.8	7.4e-21
QAZ13030.1|1293893_1294799_+	GTPase Era	NA	NA	NA	NA	NA
QAZ13031.1|1294810_1295539_+	DNA repair protein RecO	NA	NA	NA	NA	NA
QAZ13032.1|1295550_1296282_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
QAZ13033.1|1296281_1296662_+	holo-ACP synthase	NA	NA	NA	NA	NA
QAZ13034.1|1296773_1297034_-	ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.5	4.9e-18
QAZ13035.1|1297071_1297998_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	24.4	1.8e-09
QAZ13036.1|1298113_1299310_+	MFS transporter	NA	NA	NA	NA	NA
QAZ13037.1|1299331_1300249_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
QAZ13038.1|1300287_1301136_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
QAZ13039.1|1301251_1302145_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA	NA
QAZ13040.1|1302155_1303517_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
QAZ13041.1|1303520_1304156_+	phosphatidylglycerophosphatase C	NA	NA	NA	NA	NA
QAZ13042.1|1304180_1304732_+|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
1310579:1310595	attR	GTAGGCCGGATAAGGCG	NA	NA	NA	NA
>prophage 2
CP025234	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 chromosome, complete genome	4830646	1748640	1757811	4830646	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
QAZ13441.1|1748640_1749588_+	ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	2.8e-10
QAZ13442.1|1749571_1750303_+	ABC transporter permease	NA	NA	NA	NA	NA
QAZ13443.1|1750283_1750391_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ13444.1|1750450_1751182_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
QAZ13445.1|1751404_1753090_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
QAZ13446.1|1753086_1753806_+	DNA-binding response regulator	NA	NA	NA	NA	NA
QAZ13447.1|1753852_1754320_+	DUF1456 domain-containing protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
QAZ13448.1|1754376_1754907_-	lipoprotein	NA	NA	NA	NA	NA
QAZ13449.1|1755078_1755537_-	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
QAZ13450.1|1755777_1757811_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
>prophage 3
CP025234	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 chromosome, complete genome	4830646	1825902	1836409	4830646		Enterobacteria_phage(37.5%)	10	NA	NA
QAZ13505.1|1825902_1827306_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	3.1e-21
QAZ13506.1|1827483_1828377_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
QAZ13507.1|1828753_1829839_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.2e-102
QAZ13508.1|1829838_1830738_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
QAZ13509.1|1830785_1831664_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.8	5.1e-107
QAZ13510.1|1831664_1832216_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	1.0e-52
QAZ13511.1|1832221_1833196_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
QAZ13512.1|1833211_1833985_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
QAZ13513.1|1833989_1835069_+	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.5	1.3e-16
QAZ13514.1|1835095_1836409_+	LPS biosynthesis protein	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	9.1e-52
>prophage 4
CP025234	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 chromosome, complete genome	4830646	1929541	1940191	4830646		Morganella_phage(25.0%)	13	NA	NA
QAZ13604.1|1929541_1930066_-	peptidase	NA	G9L6C4	Escherichia_phage	77.7	1.3e-36
QAZ13605.1|1930712_1931003_-	DUF4102 domain-containing protein	NA	B7SYF8	Stenotrophomonas_phage	50.9	1.0e-08
QAZ13606.1|1931374_1932172_-	protein MtfA	NA	NA	NA	NA	NA
QAZ13607.1|1932652_1932814_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ13608.1|1932940_1933360_+	DNA polymerase V subunit UmuD	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
QAZ13609.1|1933362_1934631_+	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	92.2	1.4e-227
QAZ13610.1|1935085_1935298_+	cold-shock protein CspJ	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
QAZ16405.1|1935308_1935497_+	cold-shock protein	NA	NA	NA	NA	NA
QAZ13611.1|1935754_1936951_-	porin OmpS1	NA	Q1MVN1	Enterobacteria_phage	56.1	5.1e-110
QAZ13612.1|1936962_1937163_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ13613.1|1937600_1937912_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ13614.1|1937991_1938687_+	phosphohydrolase	NA	S4W232	Pandoravirus	28.0	2.8e-07
QAZ13615.1|1938760_1940191_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	1.0e-104
>prophage 5
CP025234	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 chromosome, complete genome	4830646	2045229	2080346	4830646	integrase,tail,protease	Salmonella_phage(25.0%)	37	2046987:2047002	2062020:2062035
QAZ13730.1|2045229_2046309_-|integrase	integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	52.5	8.7e-101
2046987:2047002	attL	CACTTCTTCTTTTTCA	NA	NA	NA	NA
QAZ13731.1|2047442_2047730_+	lytic enzyme	NA	Q8HA86	Salmonella_phage	92.7	8.1e-38
QAZ13732.1|2048517_2048685_-	lytic enzyme	NA	NA	NA	NA	NA
QAZ13733.1|2048749_2048938_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ13734.1|2049410_2050292_+|tail	phage tail protein	tail	A0A0M4RTP2	Salmonella_phage	74.9	1.4e-64
QAZ13735.1|2050388_2050589_-	phage virulence factor	NA	NA	NA	NA	NA
QAZ13736.1|2050790_2050895_-|tail	phage tail protein	tail	NA	NA	NA	NA
QAZ13737.1|2051157_2051283_+	arsenic transporter	NA	NA	NA	NA	NA
QAZ13738.1|2051411_2051678_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ13739.1|2052430_2053045_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
QAZ13740.1|2053054_2053213_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ13741.1|2053345_2054260_-	protein PagO	NA	NA	NA	NA	NA
QAZ16409.1|2054877_2055078_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ13742.1|2055368_2055617_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ13743.1|2055554_2055923_-|integrase	integrase	integrase	K7PHK0	Enterobacteria_phage	39.8	5.4e-18
QAZ13744.1|2057386_2057527_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ13745.1|2057691_2057961_-	hypothetical protein	NA	Q6UAV5	Klebsiella_phage	39.0	1.5e-06
QAZ13746.1|2058007_2058202_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ13747.1|2058330_2058750_+	N-acetyltransferase	NA	NA	NA	NA	NA
QAZ13748.1|2061822_2062836_-	acyltransferase	NA	NA	NA	NA	NA
2062020:2062035	attR	TGAAAAAGAAGAAGTG	NA	NA	NA	NA
QAZ13749.1|2063532_2063736_-	fimbrial protein	NA	NA	NA	NA	NA
QAZ13750.1|2063919_2064204_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ13751.1|2065363_2065573_+	chemotaxis protein	NA	NA	NA	NA	NA
QAZ13752.1|2065800_2066277_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ13753.1|2066592_2066988_-	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	32.8	7.0e-16
QAZ13754.1|2067671_2068394_+	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA	NA
QAZ13755.1|2068678_2068843_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ13756.1|2069066_2069717_+	protein-serine/threonine phosphatase	NA	A0A222YWF0	Escherichia_phage	50.9	2.7e-57
QAZ13757.1|2069735_2069927_-	DUF1482 domain-containing protein	NA	NA	NA	NA	NA
QAZ13758.1|2070037_2070277_-	DUF1480 domain-containing protein	NA	NA	NA	NA	NA
QAZ16410.1|2070391_2071831_-	ribosomal RNA small subunit methyltransferase F	NA	NA	NA	NA	NA
QAZ13759.1|2071908_2074548_-	MCE family protein	NA	NA	NA	NA	NA
QAZ13760.1|2074510_2075794_-	paraquat-inducible protein A	NA	NA	NA	NA	NA
QAZ13761.1|2075835_2076420_+	Free methionine-R-sulfoxide reductase	NA	NA	NA	NA	NA
QAZ13762.1|2076517_2077204_+	RNA chaperone ProQ	NA	NA	NA	NA	NA
QAZ13763.1|2077223_2079272_+|tail,protease	tail-specific protease	tail,protease	A0A0R6PIZ1	Moraxella_phage	33.5	8.0e-87
QAZ13764.1|2079464_2080346_+|protease	protease HtpX	protease	NA	NA	NA	NA
>prophage 6
CP025234	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 chromosome, complete genome	4830646	2838574	2966810	4830646	integrase,head,protease,holin,portal,tRNA,tail,lysis	Salmonella_phage(51.89%)	158	2906167:2906186	2977962:2977981
QAZ16442.1|2838574_2838895_-	hypothetical protein	NA	E5G6P3	Salmonella_phage	76.6	1.2e-08
QAZ14518.1|2839112_2839988_+	SPI-2 type III secretion system effector PipB	NA	NA	NA	NA	NA
QAZ14519.1|2840209_2840890_+|protease	type III secretion system effector protease PipA	protease	Q9MBM0	Phage_Gifsy-2	71.0	9.8e-82
QAZ14520.1|2841278_2841545_+	hypothetical protein	NA	A0A0M3ULK3	Salmonella_phage	78.4	7.3e-33
QAZ14521.1|2841601_2842249_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16443.1|2842291_2842489_-	hypothetical protein	NA	S4TTF2	Salmonella_phage	97.0	1.4e-09
QAZ14522.1|2843114_2843507_-	DUF1353 domain-containing protein	NA	I1TQ41	Pseudomonas_phage	37.4	8.5e-14
QAZ14523.1|2843616_2844225_-	DUF4376 domain-containing protein	NA	S5MBX6	Escherichia_phage	44.7	1.1e-31
QAZ14524.1|2844287_2844473_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14525.1|2844721_2845240_-|tail	phage tail protein	tail	A0A0U2QV64	Escherichia_phage	53.8	2.0e-47
QAZ14526.1|2845254_2846787_-|tail	phage tail protein	tail	S4TP62	Salmonella_phage	66.2	1.4e-128
QAZ14527.1|2846786_2847467_-	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	96.0	5.5e-125
QAZ14528.1|2847463_2848663_-	hypothetical protein	NA	A0A0M4RD32	Salmonella_phage	96.7	5.5e-213
QAZ14529.1|2848663_2849017_-	hypothetical protein	NA	A0A0M4R339	Salmonella_phage	95.7	3.0e-58
QAZ14530.1|2849016_2849769_-	translation initiation factor IF-2	NA	A0A0M5M1K7	Salmonella_phage	69.8	9.7e-91
QAZ14531.1|2849887_2850343_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14532.1|2850426_2850759_-	hypothetical protein	NA	A0A0M4RTY3	Salmonella_phage	69.1	1.7e-23
QAZ14533.1|2850755_2851823_-	hypothetical protein	NA	A0A0M4QX01	Salmonella_phage	91.5	2.0e-174
QAZ14534.1|2851825_2852128_-	hypothetical protein	NA	A0A0M4R5B7	Salmonella_phage	100.0	4.2e-53
QAZ14535.1|2852127_2852703_-	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	100.0	2.4e-97
QAZ14536.1|2852702_2854712_-	lytic transglycosylase	NA	A0A0M4REK7	Salmonella_phage	95.2	0.0e+00
QAZ16444.1|2854701_2854878_-	NTP pyrophosphohydrolase	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	72.9	4.7e-12
QAZ14537.1|2854889_2855342_-	hypothetical protein	NA	A0A0M4S6U8	Salmonella_phage	78.7	1.3e-61
QAZ14538.1|2855345_2855789_-	DUF3277 domain-containing protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	74.5	1.0e-55
QAZ14539.1|2855801_2856947_-	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	75.3	1.2e-164
QAZ14540.1|2856950_2857514_-	hypothetical protein	NA	A0A0M4R331	Salmonella_phage	78.7	2.1e-82
QAZ14541.1|2857488_2857878_-|head,tail	head-tail adaptor	head,tail	A0A0M3ULK0	Salmonella_phage	98.4	2.1e-68
QAZ14542.1|2857864_2858419_-	hypothetical protein	NA	A0A0M4S631	Salmonella_phage	99.5	1.4e-94
QAZ14543.1|2858415_2858823_-	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	96.3	3.0e-70
QAZ14544.1|2858788_2859178_-	hypothetical protein	NA	A0A0M4RTX5	Salmonella_phage	62.0	4.0e-32
QAZ14545.1|2859219_2860161_-	hypothetical protein	NA	A0A0M3ULD3	Salmonella_phage	99.7	3.1e-179
QAZ14546.1|2860172_2860670_-	hypothetical protein	NA	A0A0M4QWZ6	Salmonella_phage	99.4	8.7e-88
QAZ14547.1|2860674_2861907_-	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	99.3	3.7e-228
QAZ16445.1|2861910_2862450_-|head	phage head morphogenesis protein	head	A0A0M4REK0	Salmonella_phage	91.0	4.5e-82
QAZ14548.1|2862541_2864011_-	hypothetical protein	NA	A0A0M4S6U1	Salmonella_phage	99.2	1.3e-280
QAZ14549.1|2864010_2865633_-	TerL protein	NA	A0A0M5M1R6	Salmonella_phage	99.4	0.0e+00
QAZ14550.1|2865635_2866265_-	hypothetical protein	NA	A0A0M3ULJ9	Salmonella_phage	98.1	1.5e-108
QAZ16446.1|2866765_2867221_-|lysis	lysis protein	lysis	A0A0M4RD57	Salmonella_phage	76.8	1.3e-53
QAZ14551.1|2867538_2868078_-	lysozyme	NA	K7PLY1	Enterobacteria_phage	74.1	4.0e-78
QAZ16447.1|2868055_2868358_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
QAZ14552.1|2868560_2868749_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14553.1|2869141_2869720_-	DUF1133 domain-containing protein	NA	A0A0U2S606	Escherichia_phage	52.0	2.4e-44
QAZ14554.1|2869716_2870010_-	DUF1364 domain-containing protein	NA	A0A0U2KD41	Escherichia_phage	65.3	2.1e-33
QAZ14555.1|2870006_2870603_-	DUF1367 domain-containing protein	NA	H9C173	Pectobacterium_phage	73.7	1.5e-81
QAZ14556.1|2870671_2870863_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14557.1|2871046_2871385_-	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	86.6	3.7e-50
QAZ14558.1|2871384_2871555_-	methyltransferase	NA	I6S1S6	Salmonella_phage	87.5	6.3e-06
QAZ14559.1|2871551_2872154_-	adenine methylase	NA	G9L699	Escherichia_phage	87.3	1.7e-98
QAZ14560.1|2872146_2872395_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14561.1|2872398_2873079_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14562.1|2873116_2874505_-	replicative DNA helicase	NA	Q76H51	Enterobacteria_phage	47.1	1.2e-105
QAZ14563.1|2874501_2875482_-	helix-turn-helix domain-containing protein	NA	H9C164	Pectobacterium_phage	80.6	2.3e-44
QAZ14564.1|2875484_2875709_-	hypothetical protein	NA	H9C163	Pectobacterium_phage	44.7	1.0e-08
QAZ14565.1|2875731_2876178_-	hypothetical protein	NA	H9C162	Pectobacterium_phage	50.4	5.5e-25
QAZ16448.1|2876112_2876328_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14566.1|2876242_2876476_-	XRE family transcriptional regulator	NA	A0A0U2S629	Escherichia_phage	48.6	6.2e-12
QAZ14567.1|2876574_2877039_+	transcriptional regulator	NA	A0A0U2QW76	Escherichia_phage	51.7	2.7e-35
QAZ14568.1|2877723_2878047_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14569.1|2878054_2878300_+	hypothetical protein	NA	A0A1B1W282	Salmonella_phage	53.8	3.5e-13
QAZ14570.1|2878329_2880594_+	hypothetical protein	NA	H9C157	Pectobacterium_phage	34.7	1.5e-102
QAZ14571.1|2880590_2881145_+	hypothetical protein	NA	H9C156	Pectobacterium_phage	59.3	1.3e-47
QAZ14572.1|2881147_2881330_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14573.1|2881379_2881577_+	hypothetical protein	NA	H9C154	Pectobacterium_phage	58.5	8.3e-10
QAZ14574.1|2881542_2881767_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
QAZ14575.1|2881767_2882787_+|integrase	integrase	integrase	A0A192Y7M7	Salmonella_phage	53.5	1.2e-91
QAZ14576.1|2883374_2884034_+	transmembrane protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
QAZ14577.1|2884120_2884450_+	sulfurtransferase TusE	NA	NA	NA	NA	NA
QAZ14578.1|2884446_2884728_-	acylphosphatase	NA	NA	NA	NA	NA
QAZ14579.1|2884776_2885556_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
QAZ14580.1|2885581_2886130_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
QAZ14581.1|2886344_2887556_+	ribosomal RNA large subunit methyltransferase I	NA	NA	NA	NA	NA
QAZ14582.1|2887613_2887931_+	heat-shock protein HspQ	NA	NA	NA	NA	NA
QAZ14583.1|2887975_2888392_-	CoA-binding protein	NA	NA	NA	NA	NA
QAZ14584.1|2888562_2889225_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14585.1|2889319_2889778_+	methylglyoxal synthase	NA	NA	NA	NA	NA
QAZ14586.1|2889813_2891868_-	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.6	1.1e-19
QAZ14587.1|2891991_2892438_+	YccF domain-containing protein	NA	NA	NA	NA	NA
QAZ14588.1|2892456_2894610_+	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
QAZ14589.1|2894596_2895202_-	DNA transformation protein	NA	NA	NA	NA	NA
QAZ14590.1|2895418_2895928_+	cell division inhibitor SulA	NA	NA	NA	NA	NA
QAZ14591.1|2896284_2897337_+	porin OmpA	NA	NA	NA	NA	NA
QAZ14592.1|2897408_2897861_-	macrodomain Ter protein	NA	NA	NA	NA	NA
QAZ14593.1|2898046_2899807_+|protease	Lon protease family protein	protease	NA	NA	NA	NA
QAZ14594.1|2899875_2900394_+	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA	NA
QAZ14595.1|2900493_2900661_-	ribosome modulation factor	NA	NA	NA	NA	NA
QAZ14596.1|2900916_2901480_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14597.1|2901476_2903117_-	paraquat-inducible protein B	NA	NA	NA	NA	NA
QAZ14598.1|2903121_2904375_-	paraquat-inducible protein A	NA	NA	NA	NA	NA
QAZ14599.1|2904389_2906297_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
2906167:2906186	attL	GTGGATTTCCCGGCGCCGTT	NA	NA	NA	NA
QAZ14600.1|2906309_2908418_-	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA	NA
QAZ14601.1|2908516_2909626_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14602.1|2909622_2910165_-	cell division protein ZapC	NA	NA	NA	NA	NA
QAZ14603.1|2910330_2911341_-	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA	NA
QAZ14604.1|2911548_2914161_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.8	4.8e-20
QAZ14605.1|2914587_2914779_+	DNA-damage-inducible protein I	NA	S4TNM0	Salmonella_phage	95.2	6.2e-26
QAZ14606.1|2915049_2915736_+	virulence protein	NA	NA	NA	NA	NA
QAZ14607.1|2915720_2916020_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14608.1|2916088_2916715_+	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	63.2	1.4e-66
QAZ14609.1|2917362_2918331_-	SPI-2 type III secretion system effector SseI	NA	Q9MBL9	Phage_Gifsy-2	100.0	7.1e-195
QAZ14610.1|2918806_2919388_-|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	89.5	1.7e-95
QAZ14611.1|2919387_2921826_-|tail	phage tail protein	tail	A0A0K2FIZ6	Escherichia_phage	63.4	2.9e-91
QAZ14612.1|2921879_2922122_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14613.1|2922160_2925511_-	host specificity protein J	NA	A0A0K2FI38	Escherichia_phage	68.6	0.0e+00
QAZ14614.1|2925582_2926287_-|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	62.6	9.2e-67
QAZ14615.1|2926184_2926922_-|tail	phage tail protein	tail	A0A0P0ZE89	Stx2-converting_phage	76.1	1.6e-114
QAZ14616.1|2926931_2927627_-|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	66.7	1.3e-89
QAZ14617.1|2927716_2928250_+	superoxide dismutase [Cu-Zn] SodC1	NA	Q9MC02	Salmonella_phage	54.0	1.8e-46
QAZ14618.1|2928366_2928864_-	Ail/OmpX	NA	A0A1B0VBR9	Salmonella_phage	36.6	1.4e-16
QAZ14619.1|2928962_2929295_-|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	61.5	3.3e-35
QAZ16449.1|2929291_2932279_-|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	62.1	8.2e-266
QAZ14620.1|2932358_2932688_-|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	50.9	5.0e-23
QAZ14621.1|2932684_2933083_-|tail	phage minor tail protein G	tail	K7PLV8	Enterobacteria_phage	56.8	8.6e-30
QAZ14622.1|2933128_2933878_-|tail	phage tail protein	tail	A0A291AWU6	Escherichia_phage	68.6	3.7e-90
QAZ14623.1|2933889_2934291_-|tail	phage tail protein	tail	K7PHM6	Enterobacterial_phage	60.9	1.5e-42
QAZ14624.1|2934287_2934854_-|tail	phage tail protein	tail	Q9G063	Phage_Gifsy-2	97.8	9.5e-14
QAZ14625.1|2934834_2935134_-	ATP-binding protein	NA	K7PH43	Enterobacteria_phage	45.1	4.5e-15
QAZ14626.1|2935126_2935450_-	recombinase RecA	NA	K7PLV6	Enterobacteria_phage	61.3	7.7e-29
QAZ16451.1|2935540_2937622_-	peptidase S14	NA	A0A291AWT6	Escherichia_phage	69.5	4.8e-265
QAZ16450.1|2937545_2939063_-|portal	phage portal protein	portal	A0A291AWU2	Escherichia_phage	65.1	1.5e-175
QAZ14627.1|2939089_2939296_-	primosomal replication protein PriB/PriC domain protein	NA	A0A1W6JT66	Pseudomonas_phage	53.3	2.9e-05
QAZ14628.1|2939292_2941431_-	DNA packaging protein	NA	A5LH27	Enterobacteria_phage	72.6	3.4e-290
QAZ14629.1|2941387_2941921_-	DNA breaking-rejoining protein	NA	A0A291AWV8	Escherichia_phage	48.1	1.0e-33
QAZ16453.1|2942128_2942608_-|lysis	lysis protein	lysis	Q56118	Enterobacteria_phage	77.0	1.4e-55
QAZ14630.1|2942625_2943078_-	lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	2.3e-79
QAZ16452.1|2943061_2943391_-|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
QAZ14631.1|2943666_2944353_+|protease	type III secretion system effector protease GtgA	protease	Q9MBM0	Phage_Gifsy-2	100.0	2.1e-132
QAZ14632.1|2944713_2945163_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14633.1|2945298_2945424_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14634.1|2945597_2945915_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14635.1|2945981_2946779_-	antitermination protein	NA	A0A0M4S661	Salmonella_phage	99.6	2.3e-151
QAZ14636.1|2946768_2946915_-	hypothetical protein	NA	A0A0M5M7B2	Salmonella_phage	97.9	4.3e-19
QAZ14637.1|2946911_2947523_-	protein NinG	NA	A0A0M4RU10	Salmonella_phage	91.6	6.9e-79
QAZ14638.1|2947525_2947732_-	hypothetical protein	NA	S4TNP0	Salmonella_phage	100.0	3.5e-35
QAZ14639.1|2947731_2948334_-	hypothetical protein	NA	S4TTI0	Salmonella_phage	98.5	8.3e-109
QAZ14640.1|2948416_2948638_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14641.1|2948749_2948983_-	DinI family protein	NA	H6WRY5	Salmonella_phage	98.7	2.1e-36
QAZ14642.1|2949274_2949565_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14643.1|2949642_2949954_-	hypothetical protein	NA	A0A220NQV2	Salmonella_phage	97.2	7.2e-32
QAZ14644.1|2949950_2950298_-	DNA-binding protein	NA	H6WRX9	Salmonella_phage	89.6	5.4e-52
QAZ14645.1|2950308_2951058_-	DNA replication protein DnaC	NA	S4TNF5	Salmonella_phage	99.6	3.6e-138
QAZ14646.1|2951060_2952044_-	hypothetical protein	NA	H6WRX7	Salmonella_phage	100.0	1.9e-163
QAZ14647.1|2952128_2952503_-	hypothetical protein	NA	S4TTD7	Salmonella_phage	99.2	3.9e-64
QAZ14648.1|2952468_2952708_-	helix-turn-helix domain-containing protein	NA	H6WRX5	Salmonella_phage	47.2	8.3e-12
QAZ14649.1|2952827_2953238_+	transcriptional regulator	NA	A0A1B5FPF4	Escherichia_phage	42.4	8.1e-07
QAZ14650.1|2953287_2953548_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14651.1|2953540_2953699_+	hypothetical protein	NA	H6WRX3	Salmonella_phage	98.1	1.2e-22
QAZ14652.1|2953720_2954020_+	DNA breaking-rejoining protein	NA	S4TSN6	Salmonella_phage	84.5	8.1e-49
QAZ14653.1|2954146_2957032_+	exodeoxyribonuclease	NA	S4TNL0	Salmonella_phage	97.3	0.0e+00
QAZ14654.1|2956994_2958152_+	enterohemolysin	NA	S4TTE8	Salmonella_phage	100.0	1.6e-217
QAZ14655.1|2958194_2958434_+	DUF4060 domain-containing protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
QAZ14656.1|2958474_2958723_+	excisionase	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
QAZ14657.1|2958767_2960060_+|integrase	integrase	integrase	S4TSP2	Salmonella_phage	99.8	1.0e-252
QAZ14658.1|2960254_2961457_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
QAZ14659.1|2961537_2962971_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
QAZ14660.1|2963216_2964431_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
QAZ14661.1|2964517_2964751_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14662.1|2964747_2965209_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
QAZ14663.1|2965409_2966810_+|tRNA	asparagine--tRNA ligase	tRNA	A0A167RLM0	Powai_lake_megavirus	35.1	4.5e-81
2977962:2977981	attR	GTGGATTTCCCGGCGCCGTT	NA	NA	NA	NA
>prophage 7
CP025234	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 chromosome, complete genome	4830646	3026749	3106436	4830646	integrase,capsid,plate,protease,head,portal,tRNA,tail	Salmonella_phage(65.45%)	96	3071876:3071892	3106511:3106527
QAZ14705.1|3026749_3027454_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
QAZ14706.1|3027454_3027838_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14707.1|3027765_3027984_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
QAZ14708.1|3028074_3028986_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAZ14709.1|3029094_3029955_+	pirin family protein	NA	NA	NA	NA	NA
QAZ14710.1|3029974_3030652_+	hydrolase	NA	NA	NA	NA	NA
QAZ14711.1|3031240_3031618_+|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	42.7	5.9e-20
QAZ14712.1|3031779_3031977_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14713.1|3032190_3034467_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
QAZ14714.1|3034497_3034818_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
QAZ14715.1|3035141_3035363_+	cold shock domain protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
QAZ14716.1|3035317_3035512_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14717.1|3035492_3037439_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	42.3	9.1e-40
QAZ14718.1|3037435_3038554_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.8e-08
QAZ14719.1|3038681_3039650_+	DUF535 domain-containing protein	NA	NA	NA	NA	NA
QAZ14720.1|3039646_3041305_-	ATP-dependent endonuclease	NA	NA	NA	NA	NA
QAZ16457.1|3041340_3041529_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14721.1|3041506_3042406_+	DUF340 domain-containing protein	NA	NA	NA	NA	NA
QAZ14722.1|3042549_3044202_+	hydroxylamine reductase	NA	NA	NA	NA	NA
QAZ14723.1|3044213_3045182_+	NADH oxidoreductase	NA	NA	NA	NA	NA
QAZ14724.1|3045339_3047058_+	ubiquinone-dependent pyruvate dehydrogenase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.4	1.7e-29
QAZ14725.1|3047096_3048098_+	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
QAZ14726.1|3048108_3049542_+	DUF2867 domain-containing protein	NA	NA	NA	NA	NA
QAZ14727.1|3049637_3050651_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
QAZ14728.1|3050647_3051478_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B0UZW5	Roseobacter_phage	30.7	2.3e-08
QAZ14729.1|3051474_3051798_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14730.1|3051925_3052441_+	lipoprotein	NA	NA	NA	NA	NA
QAZ14731.1|3052670_3053399_+	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	35.8	5.1e-28
QAZ14732.1|3053416_3054148_+	arginine/ornithine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QAZ14733.1|3054154_3054871_+	arginine transporter permease subunit ArtQ	NA	NA	NA	NA	NA
QAZ14734.1|3054870_3055539_+	arginine transporter permease subunit ArtM	NA	NA	NA	NA	NA
QAZ14735.1|3055775_3056507_+	arginine/ornithine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QAZ14736.1|3056528_3056732_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14737.1|3056724_3058212_-	sulfatase	NA	NA	NA	NA	NA
QAZ14738.1|3058221_3058542_-	PTS sugar transporter IIB	NA	NA	NA	NA	NA
QAZ14739.1|3058571_3059915_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA	NA
QAZ14740.1|3060197_3061328_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A1X9I6F4	Streptococcus_phage	25.8	1.2e-23
QAZ16458.1|3061370_3061844_-	DUF2593 domain-containing protein	NA	NA	NA	NA	NA
QAZ14741.1|3061917_3062763_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
QAZ14742.1|3062759_3063713_-	putrescine ABC transporter permease	NA	NA	NA	NA	NA
QAZ14743.1|3063722_3064856_-	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.9	6.5e-30
QAZ14744.1|3064943_3066056_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
QAZ14745.1|3066404_3066881_-	YbjN domain-containing protein	NA	NA	NA	NA	NA
QAZ14746.1|3066976_3067879_-	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	34.0	3.5e-34
QAZ14747.1|3067936_3068659_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
QAZ14748.1|3068642_3068933_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14749.1|3069102_3069366_+	glutaredoxin	NA	A0A2I7SAE2	Vibrio_phage	70.5	5.9e-27
QAZ14750.1|3069397_3069775_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14751.1|3070045_3071731_+	transporter	NA	NA	NA	NA	NA
3071876:3071892	attL	ATGGGTTTTTTGTTGCC	NA	NA	NA	NA
QAZ14752.1|3071966_3072185_-	transcriptional regulator	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
QAZ14753.1|3072275_3073376_-	late control protein D	NA	A0A1S6KZZ5	Salmonella_phage	87.7	4.9e-176
QAZ14754.1|3073372_3073858_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.6	3.7e-67
QAZ14755.1|3073854_3076932_-|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	62.9	0.0e+00
QAZ14756.1|3076924_3077044_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.8e-13
QAZ14757.1|3077058_3077361_-|tail	phage tail assembly protein	tail	A0A1S6KZZ9	Salmonella_phage	88.0	1.2e-39
QAZ14758.1|3077415_3077931_-|tail	phage major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.3	2.1e-89
QAZ14759.1|3077940_3079113_-|tail	phage tail protein	tail	A0A1S6KZY7	Salmonella_phage	90.5	7.8e-204
QAZ14760.1|3079255_3079822_-	DNA-invertase	NA	A0A1S6L009	Salmonella_phage	84.8	1.9e-86
QAZ14761.1|3079852_3080359_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ14762.1|3080361_3080772_+|tail	tail fiber assembly protein	tail	B6SCW7	Bacteriophage	43.3	1.1e-19
QAZ14763.1|3080752_3080986_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ14764.1|3080988_3082473_-|tail	phage tail protein	tail	M1TAS6	Escherichia_phage	78.7	1.0e-152
QAZ14765.1|3082469_3083075_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	92.0	5.8e-110
QAZ14766.1|3083067_3083976_-|plate	baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	90.1	6.6e-142
QAZ14767.1|3083962_3084322_-|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	87.4	1.9e-52
QAZ14768.1|3084318_3084897_-|plate	phage baseplate assembly protein V	plate	A0A1S6KZX7	Salmonella_phage	94.8	2.9e-103
QAZ14769.1|3084995_3086516_+	SIR2 family protein	NA	A0A1S5SA14	Streptococcus_phage	28.8	6.5e-09
QAZ14770.1|3086519_3086972_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	76.4	4.7e-56
QAZ14771.1|3086964_3087396_-|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	93.7	4.4e-72
QAZ14772.1|3087358_3087562_-	hypothetical protein	NA	A0A1S6KZX6	Salmonella_phage	76.1	1.4e-23
QAZ14773.1|3087491_3087920_-	hypothetical protein	NA	E5G6N2	Salmonella_phage	77.3	2.9e-47
QAZ14774.1|3087916_3088294_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	40.8	1.8e-16
QAZ16459.1|3088295_3088769_-	glycoside hydrolase	NA	E5G6N1	Salmonella_phage	91.0	8.3e-80
QAZ14775.1|3088788_3089004_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	80.3	1.8e-26
QAZ14776.1|3089007_3089214_-|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	92.6	1.2e-30
QAZ14777.1|3089213_3089678_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.0	4.2e-76
QAZ14778.1|3089773_3090424_-	hypothetical protein	NA	E5G6M7	Salmonella_phage	96.3	8.7e-112
QAZ14779.1|3090427_3091486_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.7	9.9e-182
QAZ14780.1|3091502_3092336_-|capsid	capsid protein	capsid	A0A1S6KZW9	Salmonella_phage	88.8	6.3e-123
QAZ14781.1|3092478_3094245_+	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	99.5	0.0e+00
QAZ14782.1|3094244_3095276_+|portal	phage portal protein	portal	E5G6M3	Salmonella_phage	87.7	1.3e-170
QAZ14783.1|3095316_3096975_-	AAA family ATPase	NA	NA	NA	NA	NA
QAZ14784.1|3096964_3098113_-	DUF4297 domain-containing protein	NA	NA	NA	NA	NA
QAZ14785.1|3098353_3098659_-	DinI family protein	NA	E5G6M1	Salmonella_phage	88.3	1.1e-32
QAZ16460.1|3098597_3098786_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	98.4	5.5e-27
QAZ14786.1|3098939_3101354_-	replication endonuclease	NA	E5G6L9	Salmonella_phage	98.4	0.0e+00
QAZ14787.1|3101350_3102208_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	97.5	3.2e-162
QAZ14788.1|3102204_3102432_-	hypothetical protein	NA	E5G6L7	Salmonella_phage	100.0	2.7e-36
QAZ14789.1|3102431_3102665_-	DUF2732 domain-containing protein	NA	E5G6L6	Salmonella_phage	96.1	1.2e-31
QAZ14790.1|3102732_3103074_-	hypothetical protein	NA	E5G6L5	Salmonella_phage	97.3	6.6e-55
QAZ14791.1|3103191_3103488_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	92.3	2.2e-22
QAZ14792.1|3103495_3104005_-	hypothetical protein	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
QAZ14793.1|3104069_3104273_-	regulator	NA	NA	NA	NA	NA
QAZ16461.1|3104418_3104988_+	phage repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	41.9	3.2e-38
QAZ14794.1|3105003_3105195_+	hypothetical protein	NA	A0A0R6PIH8	Moraxella_phage	65.9	6.8e-09
QAZ14795.1|3105383_3106436_+|integrase	integrase	integrase	A0A218M4I3	Erwinia_phage	57.3	3.6e-107
3106511:3106527	attR	ATGGGTTTTTTGTTGCC	NA	NA	NA	NA
>prophage 8
CP025234	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 chromosome, complete genome	4830646	4424895	4469671	4830646	plate,tail,tRNA	Burkholderia_phage(40.91%)	48	NA	NA
QAZ15965.1|4424895_4425894_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
QAZ15966.1|4425981_4427292_-	conjugal transfer protein	NA	NA	NA	NA	NA
QAZ15967.1|4427538_4428054_+	transcriptional regulator Zur	NA	NA	NA	NA	NA
QAZ15968.1|4428153_4428363_-	CsbD family protein	NA	NA	NA	NA	NA
QAZ16518.1|4428384_4428498_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ15969.1|4428494_4429820_-	MATE family efflux transporter	NA	NA	NA	NA	NA
QAZ15970.1|4429998_4430607_-	LexA repressor	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
QAZ15971.1|4430715_4431084_-	diacylglycerol kinase	NA	NA	NA	NA	NA
QAZ15972.1|4431254_4433675_+	glycerol-3-phosphate 1-O-acyltransferase	NA	NA	NA	NA	NA
QAZ15973.1|4433773_4434646_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
QAZ15974.1|4434659_4435157_-	chorismate--pyruvate lyase	NA	NA	NA	NA	NA
QAZ15975.1|4435337_4436255_-	maltose operon protein MalM	NA	NA	NA	NA	NA
QAZ15976.1|4436418_4437777_-	maltoporin	NA	NA	NA	NA	NA
QAZ15977.1|4437865_4438975_-	maltose/maltodextrin import ATP-binding protein MalK	NA	Q6GZ03	Mycoplasma_phage	47.2	6.2e-17
QAZ15978.1|4439336_4440527_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA	NA
QAZ15979.1|4440658_4442203_+	maltose ABC transporter permease MalF	NA	NA	NA	NA	NA
QAZ15980.1|4442217_4443108_+	maltose ABC transporter permease	NA	NA	NA	NA	NA
QAZ15981.1|4443273_4443684_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
QAZ15982.1|4443826_4445923_-	YjbH domain-containing protein	NA	NA	NA	NA	NA
QAZ15983.1|4445922_4446660_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ15984.1|4446656_4447295_-	YjbF family lipoprotein	NA	NA	NA	NA	NA
QAZ15985.1|4447358_4447601_-	outer membrane protein	NA	NA	NA	NA	NA
QAZ15986.1|4448044_4449694_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
QAZ15987.1|4450038_4451388_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
QAZ15988.1|4451518_4451866_-	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
QAZ15989.1|4452443_4452731_+	hypothetical protein	NA	Q6QIC8	Burkholderia_phage	49.1	2.3e-16
QAZ15990.1|4452733_4453339_+	lytic transglycosylase domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	59.9	2.5e-60
QAZ15991.1|4453351_4453666_+	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
QAZ15992.1|4453825_4454281_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ15993.1|4454277_4454475_+	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
QAZ15994.1|4454464_4455892_+|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	70.9	1.8e-194
QAZ15995.1|4455891_4456416_+|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
QAZ15996.1|4456467_4456785_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
QAZ15997.1|4456744_4456873_+|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
QAZ15998.1|4456969_4459324_+|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.8	2.8e-67
QAZ15999.1|4459323_4460277_+	chemotaxis protein	NA	A4JWL1	Burkholderia_virus	50.8	2.3e-36
QAZ16000.1|4460276_4460486_+	hypothetical protein	NA	A4JWL2	Burkholderia_virus	60.3	9.8e-17
QAZ16001.1|4460473_4461517_+	phage protein D	NA	Q6QIA2	Burkholderia_phage	45.1	3.2e-76
QAZ16002.1|4461526_4462249_+|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	42.0	2.3e-12
QAZ16003.1|4462257_4462497_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16004.1|4462572_4462935_+	GtrA family protein	NA	U5P0S6	Shigella_phage	70.8	9.6e-44
QAZ16005.1|4462931_4463861_+	glycosyltransferase	NA	S5FKN0	Shigella_phage	83.8	6.7e-150
QAZ16006.1|4463860_4465408_+	hypothetical protein	NA	B9UDL6	Salmonella_phage	30.4	1.6e-50
QAZ16007.1|4465571_4465931_+|plate	baseplate protein	plate	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
QAZ16008.1|4465921_4467037_+|plate	baseplate protein	plate	Q6QI99	Burkholderia_phage	52.2	5.3e-101
QAZ16009.1|4467029_4467662_+|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	1.1e-23
QAZ16010.1|4467664_4469146_+|tail	phage tail protein	tail	A0A0M3ULF6	Salmonella_phage	52.7	2.1e-52
QAZ16011.1|4469155_4469671_+|tail	tail fiber assembly protein	tail	A0A0U2QV64	Escherichia_phage	40.7	1.3e-33
>prophage 9
CP025234	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 chromosome, complete genome	4830646	4618503	4654221	4830646	integrase,capsid,plate,head,holin,portal,terminase,tail	Salmonella_phage(45.24%)	48	4618296:4618342	4649275:4649321
4618296:4618342	attL	GATAAAAAAAACCCCCACATCATGTGGGGGAAGACAGGGATGGTGTC	NA	NA	NA	NA
QAZ16131.1|4618503_4618920_+	hypothetical protein	NA	S4TTB4	Salmonella_phage	52.3	1.8e-33
QAZ16132.1|4618954_4619173_-	transcriptional regulator	NA	S4TNZ3	Salmonella_phage	100.0	4.7e-38
QAZ16133.1|4619250_4620420_-	hypothetical protein	NA	S4TRX8	Salmonella_phage	95.6	1.4e-205
QAZ16134.1|4620416_4620902_-|tail	phage tail protein	tail	S4TUC3	Salmonella_phage	94.4	5.9e-81
QAZ16135.1|4620913_4623355_-|tail	phage tail tape measure protein	tail	A0A0M3UL85	Salmonella_phage	93.1	0.0e+00
QAZ16136.1|4623347_4623503_-|tail	GpE family phage tail protein	tail	Q6K1G8	Salmonella_virus	98.0	8.8e-23
QAZ16137.1|4623499_4623835_-|tail	phage tail assembly protein	tail	A0A0M4S5P8	Salmonella_phage	100.0	1.8e-52
QAZ16138.1|4623897_4624416_-|tail	phage major tail tube protein	tail	S4TNZ0	Salmonella_phage	99.4	1.4e-93
QAZ16139.1|4624431_4625619_-|tail	phage tail protein	tail	Q6K1H0	Salmonella_virus	100.0	2.0e-223
QAZ16140.1|4625753_4626323_-|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	86.8	3.0e-92
QAZ16141.1|4626322_4628065_-	hypothetical protein	NA	A0A0M3ULF6	Salmonella_phage	97.1	1.5e-267
QAZ16142.1|4628075_4628606_-|tail	phage tail protein I	tail	A0A0M4R4W9	Salmonella_phage	100.0	1.9e-104
QAZ16143.1|4628598_4629507_-|plate	baseplate assembly protein	plate	A0A1J0I2M3	Salmonella_phage	98.7	1.7e-158
QAZ16144.1|4629513_4629861_-|plate	baseplate assembly protein	plate	A0A0M4RE59	Salmonella_phage	98.3	2.1e-56
QAZ16145.1|4629857_4630499_-|plate	phage baseplate assembly protein V	plate	Q6K1H6	Salmonella_virus	85.0	2.4e-98
QAZ16146.1|4630575_4631952_-	DUF4062 domain-containing protein	NA	NA	NA	NA	NA
QAZ16147.1|4631956_4632424_-	phage virion morphogenesis protein	NA	O80313	Escherichia_phage	67.8	9.8e-49
QAZ16148.1|4632416_4632884_-|tail	phage tail protein	tail	U5N0S7	Enterobacteria_phage	69.0	2.2e-56
QAZ16149.1|4632846_4633092_-|holin	holin	holin	S4TNY4	Salmonella_phage	73.1	5.5e-27
QAZ16150.1|4632991_4633405_-	protein lysB	NA	O80310	Escherichia_phage	59.9	8.4e-36
QAZ16151.1|4633401_4633911_-	lysozyme	NA	A0A218M4K3	Erwinia_phage	82.6	4.6e-76
QAZ16152.1|4633894_4634116_-	primosomal protein	NA	A0A218M4L5	Erwinia_phage	71.2	8.7e-24
QAZ16153.1|4634106_4634310_-|tail	phage tail protein	tail	U5N3E7	Enterobacteria_phage	76.1	8.9e-23
QAZ16154.1|4634309_4634810_-|head	head completion/stabilization protein	head	U5N0S3	Enterobacteria_phage	68.5	3.8e-59
QAZ16155.1|4634907_4635666_-|terminase	terminase	terminase	Q94MJ2	Enterobacteria_phage	67.1	2.7e-80
QAZ16156.1|4635669_4636830_-|capsid	phage major capsid protein, P2 family	capsid	A0A0M4R4W2	Salmonella_phage	62.5	2.8e-129
QAZ16157.1|4636861_4637725_-|capsid	capsid scaffolding protein	capsid	A0A218M4L9	Erwinia_phage	64.8	4.5e-100
QAZ16158.1|4637889_4639659_+	oxidoreductase	NA	Q9T0R3	Escherichia_phage	81.0	3.2e-286
QAZ16159.1|4639658_4640696_+|portal	phage portal protein	portal	Q6K1J0	Salmonella_virus	78.7	7.7e-163
QAZ16160.1|4641216_4641408_-	hypothetical protein	NA	S4TRZ0	Salmonella_phage	100.0	1.1e-27
QAZ16161.1|4641406_4641838_+	hypothetical protein	NA	S4TUD6	Salmonella_phage	100.0	1.1e-75
QAZ16162.1|4641971_4643012_+	cell filamentation protein Fic	NA	S4TP71	Salmonella_phage	100.0	6.3e-197
QAZ16163.1|4643008_4643206_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ16523.1|4643384_4645661_-	replication endonuclease	NA	S4TTC1	Salmonella_phage	88.0	0.0e+00
QAZ16164.1|4645650_4645926_-	hypothetical protein	NA	M1TAP2	Escherichia_phage	72.5	7.0e-31
QAZ16165.1|4645922_4646147_-	hypothetical protein	NA	A0A0F7LDG9	Escherichia_phage	75.7	2.0e-23
QAZ16166.1|4646448_4646673_-	DUF2732 domain-containing protein	NA	Q7Y4C2	Escherichia_virus	78.4	3.4e-23
QAZ16167.1|4646736_4647237_-	replication protein B	NA	M1SV55	Escherichia_phage	91.0	1.8e-85
QAZ16168.1|4647406_4647679_-	hypothetical protein	NA	Q1JS36	Enterobacteria_phage	87.8	1.0e-42
QAZ16169.1|4647815_4648109_+	XRE family transcriptional regulator	NA	Q1JS45	Enterobacteria_phage	75.3	1.6e-36
QAZ16170.1|4648178_4649159_+|integrase	integrase	integrase	S4TP66	Salmonella_phage	96.0	1.5e-179
QAZ16171.1|4649343_4649844_-	stress adaptor protein CpxP	NA	NA	NA	NA	NA
4649275:4649321	attR	GATAAAAAAAACCCCCACATCATGTGGGGGAAGACAGGGATGGTGTC	NA	NA	NA	NA
QAZ16172.1|4649994_4650693_+	DNA-binding response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	30.3	5.3e-06
QAZ16173.1|4650689_4652063_+	two-component system sensor histidine kinase CpxA	NA	W8CYF6	Bacillus_phage	25.6	7.2e-15
QAZ16174.1|4652110_4652314_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ16175.1|4652434_4652830_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
QAZ16176.1|4652841_4653594_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
QAZ16177.1|4653600_4654221_-	superoxide dismutase [Mn]	NA	Q56AR7	Bacillus_thuringiensis_phage	58.9	2.4e-63
>prophage 1
CP025236	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 plasmid pSNE2-1926, complete sequence	122896	41199	105787	122896	head,integrase,transposase,tail	Morganella_phage(20.0%)	60	53661:53678	111363:111380
QAZ16595.1|41199_41817_+|head,tail	phage head-tail adapter protein	head,tail	NA	NA	NA	NA
QAZ16596.1|41817_42024_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16597.1|42028_42328_+	RNA-binding protein	NA	A0A0K1LLW2	Caulobacter_phage	55.4	3.6e-20
QAZ16598.1|42418_42907_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ16599.1|42921_45114_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	29.4	9.9e-43
QAZ16600.1|45113_45347_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ16601.1|45328_45946_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ16602.1|46113_49086_+	conjugal transfer protein TraI	NA	NA	NA	NA	NA
QAZ16603.1|49082_50948_+	conjugal transfer protein	NA	NA	NA	NA	NA
QAZ16604.1|50958_51543_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16605.1|51499_52129_+	DUF4400 domain-containing protein	NA	NA	NA	NA	NA
QAZ16606.1|52138_52585_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16607.1|52594_52972_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16608.1|52971_53634_+	hypothetical protein	NA	NA	NA	NA	NA
53661:53678	attL	CTTTCACATGTGAAAGTT	NA	NA	NA	NA
QAZ16609.1|53957_54335_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16610.1|54479_54761_+	type IV conjugative transfer system protein TraL	NA	NA	NA	NA	NA
QAZ16611.1|54757_55384_+	pilus assembly protein	NA	NA	NA	NA	NA
QAZ16612.1|55367_56285_+	conjugal transfer protein TraK	NA	NA	NA	NA	NA
QAZ16613.1|56281_57598_+	conjugal transfer protein TraB	NA	NA	NA	NA	NA
QAZ16614.1|57594_58173_+	type IV conjugative transfer system protein TraV	NA	NA	NA	NA	NA
QAZ16615.1|58176_58569_+	conjugal transfer protein TraA	NA	NA	NA	NA	NA
QAZ16616.1|60510_61218_-	disulfide isomerase	NA	NA	NA	NA	NA
QAZ16617.1|61366_66853_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ16618.1|66898_67324_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
QAZ16619.1|67580_67898_+	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA	NA
QAZ16620.1|67894_68428_-	hypothetical protein	NA	A0A1W6JNX6	Morganella_phage	54.1	6.1e-47
QAZ16621.1|68521_69667_-	class C beta-lactamase CMY-2	NA	NA	NA	NA	NA
QAZ16622.1|70485_71748_+|transposase	IS1380 family transposase ISEc9	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
QAZ16623.1|72071_73217_+	class C beta-lactamase CMY-2	NA	NA	NA	NA	NA
QAZ16624.1|73310_73844_+	hypothetical protein	NA	A0A1W6JNX6	Morganella_phage	54.1	6.1e-47
QAZ16625.1|73840_74158_-	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA	NA
QAZ16626.1|74414_74840_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
QAZ16627.1|74885_80372_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16628.1|80520_81228_+	disulfide isomerase	NA	NA	NA	NA	NA
QAZ16629.1|81224_83672_+	type IV secretion system protein TraC	NA	NA	NA	NA	NA
QAZ16630.1|83686_84004_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16631.1|84000_84531_+	S26 family signal peptidase	NA	NA	NA	NA	NA
QAZ16632.1|84493_85759_+	conjugal transfer protein TraW	NA	NA	NA	NA	NA
QAZ16633.1|85755_86427_+	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
QAZ16634.1|87454_88159_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QAZ16635.1|88221_88926_-|transposase	IS6 family transposase IS15DI	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
QAZ16636.1|89135_90125_-	DUF3330 domain-containing protein	NA	NA	NA	NA	NA
QAZ16637.1|90121_90358_-	mercury resistance protein	NA	NA	NA	NA	NA
QAZ16638.1|90354_90720_-	transcriptional regulator	NA	NA	NA	NA	NA
QAZ16639.1|90831_91470_-	alkylmercury lyase	NA	NA	NA	NA	NA
QAZ16640.1|91484_93170_-	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.9	1.1e-38
QAZ16641.1|93241_93517_-	mercuric transporter periplasmic component	NA	NA	NA	NA	NA
QAZ16642.1|93532_93883_-	mercuric transporter	NA	NA	NA	NA	NA
QAZ16643.1|93954_94389_+	mercuric resistance operon regulatory protein	NA	NA	NA	NA	NA
QAZ16644.1|94488_95493_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
QAZ16645.1|96108_96510_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16646.1|96623_97349_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16647.1|97323_97527_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ16648.1|97481_101735_+	RHS repeat protein	NA	A0A2H4JHK7	uncultured_Caudovirales_phage	47.6	1.1e-18
QAZ16649.1|101706_102147_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16650.1|102785_103388_-	hypothetical protein	NA	NA	NA	NA	NA
QAZ16651.1|103618_103939_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16652.1|103957_104245_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16653.1|104237_104774_+	hypothetical protein	NA	NA	NA	NA	NA
QAZ16654.1|104776_105787_+|integrase	integrase	integrase	A0A0K0N6I5	Gordonia_phage	31.9	3.1e-07
111363:111380	attR	CTTTCACATGTGAAAGTT	NA	NA	NA	NA
