The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031620	Streptococcus pyogenes strain MGAS29064 chromosome, complete genome	1839848	36552	48865	1839848		Synechococcus_phage(28.57%)	8	NA	NA
QBB56752.1|36552_40278_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.3	1.1e-38
QBB56753.1|40438_41893_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	2.8e-54
QBB56754.1|41920_42943_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.1	2.4e-63
QBB56755.1|43110_43665_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	6.8e-25
QBB56756.1|43848_45396_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	52.4	3.4e-45
QBB56757.1|45453_46578_-	CHAP domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
QBB56758.1|46830_48096_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
QBB56759.1|48373_48865_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	3.2e-18
>prophage 2
CP031620	Streptococcus pyogenes strain MGAS29064 chromosome, complete genome	1839848	783556	883145	1839848	tail,transposase,terminase,integrase,tRNA,capsid,portal,head	Streptococcus_phage(40.3%)	114	803527:803586	849699:849794
QBB57397.1|783556_783781_-|transposase	transposase	transposase	NA	NA	NA	NA
QBB57398.1|784100_785360_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
QBB57399.1|785525_787229_+	alpha-glycosidase	NA	NA	NA	NA	NA
QBB57400.1|787254_789390_+	cyclomaltodextrin glucanotransferase	NA	NA	NA	NA	NA
QBB57401.1|789464_790772_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
QBB57402.1|790768_791629_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
QBB57403.1|791650_792466_+	maltodextrose utilization protein malA	NA	NA	NA	NA	NA
QBB57404.1|792581_793382_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
QBB57405.1|793536_794373_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
QBB57406.1|794372_795734_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
QBB57407.1|796007_797255_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
QBB57408.1|797497_798517_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	27.8	5.7e-17
QBB57409.1|798632_800126_+	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
QBB57410.1|800160_802425_+	glycogen/starch/alpha-glucan family phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	43.7	1.2e-11
QBB57411.1|802681_803302_-	DUF3862 domain-containing protein	NA	NA	NA	NA	NA
803527:803586	attL	AACTCATGAACAAGACAAAAAGAAAAAACCTTGATGTAACAAGGTTTTAGTAAGTTATGA	NA	NA	NA	NA
QBB57412.1|803664_804753_-|integrase	site-specific integrase	integrase	Q38159	Streptococcus_phage	98.6	3.0e-202
QBB57413.1|805002_805812_-	MazF family toxin-antitoxin system	NA	J7KDP1	Streptococcus_phage	35.8	2.9e-24
QBB57414.1|805824_806568_-	helix-turn-helix domain-containing protein	NA	A0A1S5S8T5	Streptococcus_phage	62.9	2.5e-75
QBB57415.1|807060_807276_-	hypothetical protein	NA	J7KBX0	Streptococcus_phage	95.7	2.5e-28
QBB57416.1|807334_807493_+	hypothetical protein	NA	J7KH24	Streptococcus_phage	90.4	8.4e-21
QBB57417.1|807522_808122_-	hypothetical protein	NA	A0A097PAT4	Streptococcus_pyogenes_phage	100.0	3.1e-108
QBB57418.1|808175_808385_+	hypothetical protein	NA	A0A097PAQ9	Streptococcus_pyogenes_phage	100.0	1.7e-32
QBB57419.1|808373_808760_-	hypothetical protein	NA	A0A097PAT1	Streptococcus_pyogenes_phage	100.0	1.2e-65
QBB57420.1|808833_809061_+	XRE family transcriptional regulator	NA	A0A141E1R7	Streptococcus_phage	57.3	2.9e-14
QBB57421.1|809168_809678_-	hypothetical protein	NA	NA	NA	NA	NA
QBB57422.1|809732_809978_+	hypothetical protein	NA	A0A097PAP6	Streptococcus_pyogenes_phage	95.1	1.2e-34
QBB57423.1|809936_810146_-	hypothetical protein	NA	NA	NA	NA	NA
QBB57424.1|810295_810535_-	hypothetical protein	NA	NA	NA	NA	NA
QBB57425.1|810701_810887_+	XRE family transcriptional regulator	NA	A0A1X9I6I3	Streptococcus_phage	72.1	3.3e-16
QBB57426.1|810965_811262_+	hypothetical protein	NA	A0A097PAT8	Streptococcus_pyogenes_phage	98.0	3.1e-48
QBB57427.1|811258_811396_+	hypothetical protein	NA	A0A097PAR2	Streptococcus_pyogenes_phage	100.0	3.4e-18
QBB57428.1|811476_811806_+	hypothetical protein	NA	J7KBZ0	Streptococcus_phage	41.8	7.9e-13
QBB57429.1|811805_812000_+	hypothetical protein	NA	J7KK69	Streptococcus_phage	54.2	3.9e-12
QBB57430.1|811996_812281_+	hypothetical protein	NA	NA	NA	NA	NA
QBB57431.1|812277_812961_+	DNA-binding protein	NA	J7KC09	Streptococcus_phage	99.1	9.4e-125
QBB57432.1|812996_814400_+	DEAD/DEAH box helicase	NA	A0A1P8BMH7	Lactococcus_phage	72.3	2.3e-194
QBB57433.1|814404_814887_+	DUF669 domain-containing protein	NA	A0A1P8BM40	Lactococcus_phage	70.7	9.7e-60
QBB57434.1|814904_816458_+	phage resistance protein	NA	A0A1P8BM51	Lactococcus_phage	70.6	5.7e-210
QBB57435.1|816726_817596_+	hypothetical protein	NA	A0A1P8BME8	Lactococcus_phage	65.6	5.8e-103
QBB57436.1|817549_817900_+	VRR-NUC domain-containing protein	NA	A0A1P8VVL5	Streptococcus_phage	88.5	9.9e-46
QBB57437.1|817883_818240_+	hypothetical protein	NA	A0A097PAU4	Streptococcus_pyogenes_phage	100.0	2.9e-61
QBB57438.1|818236_818482_+	hypothetical protein	NA	A0A097PBE9	Streptococcus_pyogenes_phage	95.1	2.1e-39
QBB57439.1|818481_818718_+	DUF3310 domain-containing protein	NA	A0A097PAQ7	Streptococcus_pyogenes_phage	100.0	2.4e-40
QBB57440.1|818881_819166_+	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	86.2	2.6e-36
QBB57441.1|819167_819800_+	SAM-dependent DNA methyltransferase	NA	L0P368	Streptococcus_phage	68.6	5.1e-85
QBB58403.1|819804_820284_+	DUF1642 domain-containing protein	NA	A0A141E0J6	Streptococcus_phage	41.9	6.5e-24
QBB57442.1|820732_821167_+	ArpU family transcriptional regulator	NA	J7KDQ1	Streptococcus_phage	97.9	6.2e-74
QBB57443.1|821744_822659_+	hypothetical protein	NA	NA	NA	NA	NA
QBB57444.1|822677_823139_+	hypothetical protein	NA	NA	NA	NA	NA
QBB57445.1|823276_823654_-	HicB family protein	NA	I3NLB2	Bifidobacterium_phage	44.0	3.3e-15
QBB57446.1|823705_823891_-	addiction module toxin, HicA family	NA	D6PSW1	Lactobacillus_phage	54.0	1.7e-09
QBB58404.1|823953_824421_+|terminase	terminase small subunit	terminase	A0A141E1Y3	Streptococcus_phage	70.8	1.1e-52
QBB57447.1|824398_825706_+|terminase	PBSX family phage terminase large subunit	terminase	A0A2H4IYR5	uncultured_Caudovirales_phage	75.7	2.0e-184
QBB57448.1|825717_827220_+|portal	phage portal protein	portal	C9W9H5	Streptococcus_virus	54.5	1.9e-141
QBB57449.1|827200_828763_+|head	phage head morphogenesis protein	head	U6E9F1	Streptococcus_phage	44.2	2.5e-48
QBB57450.1|828766_828952_+	hypothetical protein	NA	NA	NA	NA	NA
QBB57451.1|829021_829336_+	hypothetical protein	NA	M1PLI3	Streptococcus_phage	72.8	6.8e-38
QBB57452.1|829338_829605_+	hypothetical protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	70.5	1.9e-25
QBB57453.1|829748_830282_+	DUF4355 domain-containing protein	NA	A0A141E0S7	Streptococcus_phage	80.7	6.8e-14
QBB57454.1|830291_830672_+|head	head decoration protein	head	A0A0K2CNR0	Brevibacillus_phage	32.5	1.8e-05
QBB57455.1|830674_831757_+|capsid	minor capsid protein E	capsid	A0A2H4J022	uncultured_Caudovirales_phage	57.1	3.4e-105
QBB57456.1|831766_832009_+	hypothetical protein	NA	NA	NA	NA	NA
QBB57457.1|832022_832376_+	hypothetical protein	NA	A0A2H4J002	uncultured_Caudovirales_phage	49.6	9.7e-25
QBB57458.1|832372_832681_+	hypothetical protein	NA	A0A2P1JTW8	Anoxybacillus_phage	40.2	7.4e-13
QBB57459.1|832661_833027_+	HK97 gp10 family phage protein	NA	A0A097BY98	Enterococcus_phage	46.3	5.9e-17
QBB57460.1|833023_833413_+|capsid	phage capsid protein	capsid	B5SP36	Lactococcus_phage	68.2	4.2e-45
QBB58405.1|833467_834091_+|tail	phage major tail protein, TP901-1 family	tail	D7RWD5	Brochothrix_phage	50.5	3.2e-39
QBB57461.1|834144_834498_+	hypothetical protein	NA	Q77RZ7	Lactococcus_phage	48.6	5.5e-20
QBB58406.1|834572_834869_+	hypothetical protein	NA	A0A0S2MYH1	Enterococcus_phage	42.2	1.3e-09
QBB57462.1|834883_838519_+|tail	phage tail protein	tail	C5IUK3	Streptococcus_phage	41.4	1.2e-85
QBB57463.1|838550_839330_+|tail	phage tail protein	tail	A3F655	Streptococcus_phage	54.0	1.9e-65
QBB57464.1|839326_841381_+	hypothetical protein	NA	A3F656	Streptococcus_phage	84.1	0.0e+00
QBB57465.1|841377_842592_+	hypothetical protein	NA	A3F657	Streptococcus_phage	49.5	5.0e-44
QBB57466.1|842593_842908_+	hypothetical protein	NA	NA	NA	NA	NA
QBB57467.1|842918_844814_+	hyaluronidase	NA	Q938J9	Temperate_phage	52.5	5.9e-76
QBB57468.1|844827_844989_+	hypothetical protein	NA	NA	NA	NA	NA
QBB57469.1|844991_845609_+	hypothetical protein	NA	A3F662	Streptococcus_phage	94.6	9.8e-89
QBB57470.1|845619_845916_+	hypothetical protein	NA	Q938J6	Temperate_phage	98.0	3.7e-46
QBB57471.1|845912_846098_+	hypothetical protein	NA	Q938J5	Temperate_phage	96.7	6.6e-25
QBB57472.1|846209_847544_+	lysin	NA	Q5MY96	Streptococcus_phage	93.0	1.3e-247
QBB57473.1|847619_848327_-	exotoxin type C	NA	A0A097PAT7	Streptococcus_pyogenes_phage	27.1	3.9e-09
QBB57474.1|848437_849196_-	DNAse	NA	NA	NA	NA	NA
QBB57475.1|849435_849624_+	Paratox	NA	A3F673	Streptococcus_phage	76.3	2.1e-18
QBB57476.1|850214_850829_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	52.3	6.2e-51
849699:849794	attR	AACTCATGAACAAGACAAAAAGAAAAAACCTTGATGTAACAAGGTTTTAGTAAGTTATGATTACTTACGGTAAGCATTGATGGAGCTGGTGGGAGT	NA	NA	NA	NA
QBB57477.1|850955_851741_-	ABC transporter permease	NA	NA	NA	NA	NA
QBB57478.1|851750_852449_-	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	27.3	6.6e-09
QBB57479.1|852448_852820_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
QBB57480.1|853004_856115_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	29.7	5.4e-119
QBB57481.1|856194_857208_+	ATP-dependent 6-phosphofructokinase	NA	NA	NA	NA	NA
QBB57482.1|857270_858773_+	pyruvate kinase	NA	NA	NA	NA	NA
QBB57483.1|858990_859548_+	signal peptidase I	NA	NA	NA	NA	NA
QBB57484.1|859723_861538_+	glutamine--fructose-6-phosphate aminotransferase	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.7	1.2e-97
QBB57485.1|861733_862069_+	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
QBB57486.1|862175_862817_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
QBB57487.1|862826_863456_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.5	9.8e-28
QBB57488.1|863471_864308_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QBB57489.1|864676_865450_+	hypothetical protein	NA	NA	NA	NA	NA
QBB57490.1|865819_867055_-	cation diffusion facilitator family transporter	NA	NA	NA	NA	NA
QBB57491.1|867174_868497_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
QBB57492.1|869025_871344_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.2	2.7e-131
QBB57493.1|871706_871955_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
QBB57494.1|871991_872603_+	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA	NA
QBB57495.1|872613_872802_+	DUF2273 domain-containing protein	NA	NA	NA	NA	NA
QBB57496.1|872814_873354_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
QBB57497.1|873394_873595_+	CsbD family protein	NA	J7KJ36	Streptococcus_phage	50.0	1.8e-07
QBB57498.1|873602_874094_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
QBB57499.1|874256_874898_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
QBB57500.1|875040_875583_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QBB57501.1|875700_876402_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	4.9e-36
QBB57502.1|876416_879053_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
QBB57503.1|879144_879741_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
QBB57504.1|879751_880708_+	aromatic acid exporter family protein	NA	NA	NA	NA	NA
QBB57505.1|880804_882145_+	DUF2130 domain-containing protein	NA	NA	NA	NA	NA
QBB57506.1|882260_883145_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
>prophage 3
CP031620	Streptococcus pyogenes strain MGAS29064 chromosome, complete genome	1839848	1203036	1213640	1839848		Streptococcus_phage(57.14%)	9	NA	NA
QBB57801.1|1203036_1204179_-	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	27.3	1.4e-24
QBB57802.1|1204413_1204854_+	hypothetical protein	NA	NA	NA	NA	NA
QBB57803.1|1204883_1206152_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
QBB57804.1|1206239_1207592_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.7	1.0e-29
QBB57805.1|1207813_1208155_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	41.1	2.6e-19
QBB57806.1|1208215_1209382_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
QBB57807.1|1209475_1210162_-	3-dehydroquinase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
QBB57808.1|1210158_1211322_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	64.9	4.5e-143
QBB57809.1|1211429_1213640_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	68.8	2.5e-267
>prophage 4
CP031620	Streptococcus pyogenes strain MGAS29064 chromosome, complete genome	1839848	1491821	1497695	1839848		Streptococcus_phage(100.0%)	8	NA	NA
QBB58055.1|1491821_1492649_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.9	1.7e-128
QBB58056.1|1492722_1493079_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.8	6.3e-40
QBB58057.1|1493377_1494007_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
QBB58058.1|1494053_1494446_-	hypothetical protein	NA	NA	NA	NA	NA
QBB58059.1|1494472_1495336_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.0	1.7e-115
QBB58060.1|1495340_1495664_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
QBB58061.1|1496166_1497042_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	46.6	2.1e-68
QBB58062.1|1497059_1497695_-	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	63.4	2.7e-65
>prophage 5
CP031620	Streptococcus pyogenes strain MGAS29064 chromosome, complete genome	1839848	1792937	1802925	1839848	integrase	Streptococcus_phage(75.0%)	15	1792511:1792525	1800073:1800087
1792511:1792525	attL	AATCCTTGAAGCTGT	NA	NA	NA	NA
QBB58326.1|1792937_1793111_-	DUF2758 domain-containing protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	1.9e-10
QBB58327.1|1793397_1795011_-	phage resistance protein	NA	A0A1P8BMF9	Lactococcus_phage	53.1	2.4e-147
QBB58328.1|1795000_1795522_-	hypothetical protein	NA	NA	NA	NA	NA
QBB58329.1|1795531_1795900_-	hypothetical protein	NA	A0A1X9I6M4	Streptococcus_phage	47.1	2.6e-12
QBB58435.1|1795808_1796000_-	hypothetical protein	NA	NA	NA	NA	NA
QBB58330.1|1795999_1796332_-	hypothetical protein	NA	NA	NA	NA	NA
QBB58331.1|1796343_1796526_-	hypothetical protein	NA	NA	NA	NA	NA
QBB58332.1|1796746_1797016_-	phage antirepressor protein	NA	NA	NA	NA	NA
QBB58333.1|1797045_1797612_-	phage repressor protein	NA	A0A0A7S0G2	Clostridium_phage	42.9	5.0e-23
QBB58334.1|1797627_1797816_-	XRE family transcriptional regulator	NA	A0A1X9I5U7	Streptococcus_phage	59.7	1.7e-12
QBB58335.1|1797984_1798428_+	XRE family transcriptional regulator	NA	A0A1X9I723	Streptococcus_phage	48.6	1.8e-07
QBB58336.1|1798607_1799771_+|integrase	site-specific integrase	integrase	A0A1X9I6A9	Streptococcus_phage	70.5	2.8e-161
QBB58337.1|1799927_1800539_-	30S ribosomal protein S4	NA	NA	NA	NA	NA
1800073:1800087	attR	ACAGCTTCAAGGATT	NA	NA	NA	NA
QBB58338.1|1801268_1801541_-	hypothetical protein	NA	NA	NA	NA	NA
QBB58339.1|1801557_1802925_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	63.7	1.0e-154
