assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900157305.1_MESINF_chromoso	LS974202	Mesotoga infera isolate MESINF1 genome assembly, chromosome: MESINF	1	683385-683511	1	CRISPRCasFinder	no		DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	Orphan	GTCATCCCGTAATGCTCCTATACGGGATCTCGCTC	35	1	1	683420-683476	LS974202.1_664039-664095	NA	1	1	Orphan	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	NA|84aa|up_6|LS974202.1_675678_675930_+,NA	NA|511aa|up_9|LS974202.1_672103_673636_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|351aa|up_8|LS974202.1_673632_674685_-	cd03465, URO-D_like, The URO-D _like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases	NA|212aa|up_7|LS974202.1_674681_675317_-	cd02070, corrinoid_protein_B12-BD, B12 binding domain of corrinoid proteins	NA|84aa|up_6|LS974202.1_675678_675930_+	NA	NA|116aa|up_5|LS974202.1_675922_676270_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|268aa|up_4|LS974202.1_677335_678139_+	COG5340, COG5340, Predicted transcriptional regulator [Transcription]	NA|326aa|up_3|LS974202.1_678123_679101_+	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|365aa|up_2|LS974202.1_679628_680723_+	pfam13546, DDE_5, DDE superfamily endonuclease	NA|198aa|up_1|LS974202.1_681652_682246_+	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin	NA|280aa|up_0|LS974202.1_682242_683082_+	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|428aa|down_0|LS974202.1_684230_685514_+	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase	NA|270aa|down_1|LS974202.1_685513_686323_+	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs	NA|235aa|down_2|LS974202.1_686322_687027_+	cd06426, NTP_transferase_like_2, NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family	NA|324aa|down_3|LS974202.1_687023_687995_+	TIGR04180, NAD-dependent_epimerase/dehydratase, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family	NA|368aa|down_4|LS974202.1_688004_689108_+	TIGR04181, DegT/DnrJ/EryC1/StrS_aminotransferase, aminotransferase, LLPSF_NHT_00031 family	NA|215aa|down_5|LS974202.1_689091_689736_+	TIGR03570, NeuD_NnaD, sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family	NA|410aa|down_6|LS974202.1_689754_690984_+	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|346aa|down_7|LS974202.1_691070_692108_+	TIGR04130, L-fucosamine_synthetase, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase	NA|285aa|down_8|LS974202.1_692125_692980_+	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs	NA|376aa|down_9|LS974202.1_692996_694124_+	cd03786, GTB_UDP-GlcNAc_2-Epimerase, UDP-N-acetylglucosamine 2-epimerase and similar proteins
GCA_900157305.1_MESINF_chromoso	LS974202	Mesotoga infera isolate MESINF1 genome assembly, chromosome: MESINF	2	993029-993118	2	CRISPRCasFinder	no	RT	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	Unclear	CATCCCAATATGGTTCTCGCTCA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	NA|49aa|up_8|LS974202.1_983727_983874_-,NA|61aa|up_6|LS974202.1_983929_984112_-,NA|389aa|up_4|LS974202.1_986962_988129_-,NA|299aa|up_3|LS974202.1_988115_989012_-,NA|443aa|up_2|LS974202.1_988998_990327_-,NA|47aa|up_0|LS974202.1_992388_992529_-,NA|47aa|down_1|LS974202.1_994988_995129_-	NA|486aa|up_9|LS974202.1_982240_983698_-	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|49aa|up_8|LS974202.1_983727_983874_-	NA	NA|484aa|up_7|LS974202.1_983855_985307_-	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|61aa|up_6|LS974202.1_983929_984112_-	NA	NA|491aa|up_5|LS974202.1_985473_986946_-	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|389aa|up_4|LS974202.1_986962_988129_-	NA	NA|299aa|up_3|LS974202.1_988115_989012_-	NA	NA|443aa|up_2|LS974202.1_988998_990327_-	NA	RT|442aa|up_1|LS974202.1_990704_992030_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|47aa|up_0|LS974202.1_992388_992529_-	NA	RT|442aa|down_0|LS974202.1_993304_994630_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|47aa|down_1|LS974202.1_994988_995129_-	NA	NA|423aa|down_2|LS974202.1_995471_996740_+	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli	NA|469aa|down_3|LS974202.1_996755_998162_-	cd07771, FGGY_RhuK, L-rhamnulose kinases; a subfamily of the FGGY family of carbohydrate kinases	NA|328aa|down_4|LS974202.1_998168_999152_-	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate	NA|216aa|down_5|LS974202.1_999148_999796_-	cd00956, Transaldolase_FSA, Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea	NA|473aa|down_6|LS974202.1_999819_1001238_-	cd00578, L-fuc_L-ara-isomerases, L-fucose isomerase (FucIase) and L-arabinose isomerase (AI) family; composed of FucIase, AI and similar proteins	NA|345aa|down_7|LS974202.1_1001289_1002324_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|252aa|down_8|LS974202.1_1002441_1003197_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|432aa|down_9|LS974202.1_1003218_1004514_-	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]
GCA_900157305.1_MESINF_chromoso	LS974202	Mesotoga infera isolate MESINF1 genome assembly, chromosome: MESINF	3	1304906-1308565	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	csa3,cas6,cas7,cas5,cas3,RT,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	Type I-B, Type I-B?,Type I-A	GTTTCGAATCAACCAAAGAGGGATATAAAC,GTTTCGAATCAACCAAAGAGGGATATAAAC,GTTTCGAATCAACCAAAGAGGGATATAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	53,55,55	55	TypeI-B,TypeI-B?,TypeI-A	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	NA|79aa|up_9|LS974202.1_1295533_1295770_+,NA|37aa|up_8|LS974202.1_1295837_1295948_-,NA|25aa|up_7|LS974202.1_1296330_1296405_+,NA|84aa|up_4|LS974202.1_1298262_1298514_-,NA|721aa|down_0|LS974202.1_1309246_1311409_+,NA|47aa|down_2|LS974202.1_1313663_1313804_-,NA|77aa|down_3|LS974202.1_1314304_1314535_+	NA|79aa|up_9|LS974202.1_1295533_1295770_+	NA	NA|37aa|up_8|LS974202.1_1295837_1295948_-	NA	NA|25aa|up_7|LS974202.1_1296330_1296405_+	NA	NA|405aa|up_6|LS974202.1_1296690_1297905_-	pfam00665, rve, Integrase core domain	cas6|238aa|up_5|LS974202.1_1298125_1298839_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|84aa|up_4|LS974202.1_1298262_1298514_-	NA	NA|513aa|up_3|LS974202.1_1298843_1300382_+	pfam09706, Cas_CXXC_CXXC, CRISPR-associated protein (Cas_CXXC_CXXC)	cas7|374aa|up_2|LS974202.1_1300378_1301500_+	pfam01905, DevR, CRISPR-associated negative auto-regulator DevR/Csa2	cas5|265aa|up_1|LS974202.1_1301511_1302306_+	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|775aa|up_0|LS974202.1_1302302_1304627_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|721aa|down_0|LS974202.1_1309246_1311409_+	NA	RT|442aa|down_1|LS974202.1_1311979_1313305_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|47aa|down_2|LS974202.1_1313663_1313804_-	NA	NA|77aa|down_3|LS974202.1_1314304_1314535_+	NA	cas6|245aa|down_4|LS974202.1_1314632_1315367_+	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas8b1|587aa|down_5|LS974202.1_1315371_1317132_+	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802)	cas7|317aa|down_6|LS974202.1_1317153_1318104_+	cd09690, Cas7_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|241aa|down_7|LS974202.1_1318115_1318838_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas3|782aa|down_8|LS974202.1_1318834_1321180_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas4|166aa|down_9|LS974202.1_1321176_1321674_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83
GCA_900157305.1_MESINF_chromoso	LS974202	Mesotoga infera isolate MESINF1 genome assembly, chromosome: MESINF	4	1331753-1340427	4,2,2	CRISPRCasFinder,CRT,PILER-CR	no	RT,cas6,cas8b1,cas7,cas5,cas3,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	Type III-B, Type III-B?,Type III-C,Type III-A,Type III-D,Type I-B	GCTTCCAGACTACCTATGAGGAATTGAAAC,GCTTCCAGACTACCTATGAGGAATTGAAAC,GCTTCCAGACTACCTATGAGGAATTGAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	131,131,116	131	TypeIII-B,TypeIII-B?,TypeIII-C,TypeIII-A,TypeIII-D,TypeI-B	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	cmr6gr7|188aa|up_4|LS974202.1_1325898_1326462_+,cmr5gr11|133aa|up_1|LS974202.1_1330355_1330754_+,NA|72aa|down_0|LS974202.1_1341049_1341265_+,NA|495aa|down_3|LS974202.1_1342805_1344290_-,NA|66aa|down_5|LS974202.1_1346297_1346495_-,NA|63aa|down_8|LS974202.1_1349548_1349737_+	cas4|166aa|up_9|LS974202.1_1321176_1321674_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|330aa|up_8|LS974202.1_1321678_1322668_+	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas2|90aa|up_7|LS974202.1_1322671_1322941_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	csm3gr7|353aa|up_6|LS974202.1_1322958_1324017_+	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1	NA|365aa|up_5|LS974202.1_1324704_1325799_-	pfam13546, DDE_5, DDE superfamily endonuclease	cmr6gr7|188aa|up_4|LS974202.1_1325898_1326462_+	NA	cas10|993aa|up_3|LS974202.1_1326454_1329433_+	cd09701, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr4gr7|309aa|up_2|LS974202.1_1329429_1330356_+	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cmr5gr11|133aa|up_1|LS974202.1_1330355_1330754_+	NA	cmr3gr5|275aa|up_0|LS974202.1_1330753_1331578_+	pfam03787, RAMPs, RAMP superfamily	NA|72aa|down_0|LS974202.1_1341049_1341265_+	NA	NA|165aa|down_1|LS974202.1_1341454_1341949_-	COG1569, COG1569, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|91aa|down_2|LS974202.1_1341899_1342172_-	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain	NA|495aa|down_3|LS974202.1_1342805_1344290_-	NA	NA|449aa|down_4|LS974202.1_1344582_1345929_-	COG1672, COG1672, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|66aa|down_5|LS974202.1_1346297_1346495_-	NA	NA|215aa|down_6|LS974202.1_1347370_1348015_-	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain	NA|504aa|down_7|LS974202.1_1348007_1349519_-	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases	NA|63aa|down_8|LS974202.1_1349548_1349737_+	NA	NA|335aa|down_9|LS974202.1_1350029_1351034_+	cd20002, PBP1_LsrB_Quorum_Sensing-like, ligand-binding protein LsrB-like of ABC transporter periplasmic binding protein
GCA_900157305.1_MESINF_chromoso	LS974202	Mesotoga infera isolate MESINF1 genome assembly, chromosome: MESINF	5	1355680-1355810	3	PILER-CR	no		DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	Orphan	GCTCCCGGGATGACAG	16	1	8	1355697-1355734|1355697-1355734|1355697-1355734|1355697-1355734|1355697-1355734|1355697-1355734|1355697-1355734|1355697-1355734	LS974202.1_7074-7037|LS974202.1_707377-707414|LS974202.1_719848-719885|LS974202.1_1061676-1061713|LS974202.1_1133443-1133406|LS974202.1_1133674-1133637|LS974202.1_2566695-2566658|LS974202.1_2887694-2887657	NA	2	2	Orphan	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	NA|66aa|up_9|LS974202.1_1346297_1346495_-,NA|63aa|up_6|LS974202.1_1349548_1349737_+,NA|66aa|up_0|LS974202.1_1355377_1355575_-,NA|46aa|down_0|LS974202.1_1355976_1356114_+,NA|710aa|down_5|LS974202.1_1360556_1362686_-	NA|66aa|up_9|LS974202.1_1346297_1346495_-	NA	NA|215aa|up_8|LS974202.1_1347370_1348015_-	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain	NA|504aa|up_7|LS974202.1_1348007_1349519_-	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases	NA|63aa|up_6|LS974202.1_1349548_1349737_+	NA	NA|335aa|up_5|LS974202.1_1350029_1351034_+	cd20002, PBP1_LsrB_Quorum_Sensing-like, ligand-binding protein LsrB-like of ABC transporter periplasmic binding protein	NA|497aa|up_4|LS974202.1_1351077_1352568_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|336aa|up_3|LS974202.1_1352545_1353553_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|331aa|up_2|LS974202.1_1353539_1354532_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|247aa|up_1|LS974202.1_1354556_1355297_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|66aa|up_0|LS974202.1_1355377_1355575_-	NA	NA|46aa|down_0|LS974202.1_1355976_1356114_+	NA	NA|398aa|down_1|LS974202.1_1356337_1357531_-	COG5368, COG5368, Uncharacterized protein conserved in bacteria [Function unknown]	NA|419aa|down_2|LS974202.1_1357527_1358784_-	COG5368, COG5368, Uncharacterized protein conserved in bacteria [Function unknown]	NA|302aa|down_3|LS974202.1_1358788_1359694_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|290aa|down_4|LS974202.1_1359690_1360560_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|710aa|down_5|LS974202.1_1360556_1362686_-	NA	NA|661aa|down_6|LS974202.1_1362675_1364658_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|290aa|down_7|LS974202.1_1364666_1365536_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|299aa|down_8|LS974202.1_1365540_1366437_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|905aa|down_9|LS974202.1_1366429_1369144_-	cd14489, CBM_SBP_bac_1_like, Putative Carbohydrate Binding Module (CBM) of extracellular solute-binding protein family 1
GCA_900157305.1_MESINF_chromoso	LS974202	Mesotoga infera isolate MESINF1 genome assembly, chromosome: MESINF	6	1431420-1433633	3,4,5	CRT,PILER-CR,CRISPRCasFinder	no	RT	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	Unclear	GTTGAGCGAGAACCATAGTGGGATGGAAAC,GTTGAGCGAGAACCATAGTGGGATGGAAA,GTTGAGCGAGAACCATAGTGGGATGGAAAC	30,29,30	0	0	NA	NA	NA:NA:NA	33,31,32	33	Orphan	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	NA|210aa|up_9|LS974202.1_1421700_1422330_-,NA|54aa|up_7|LS974202.1_1423027_1423189_-,NA|50aa|up_1|LS974202.1_1429753_1429903_-,NA|47aa|down_0|LS974202.1_1435225_1435366_+	NA|210aa|up_9|LS974202.1_1421700_1422330_-	NA	NA|68aa|up_8|LS974202.1_1422331_1422535_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|54aa|up_7|LS974202.1_1423027_1423189_-	NA	NA|274aa|up_6|LS974202.1_1423450_1424272_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|400aa|up_5|LS974202.1_1424250_1425450_-	PRK13915, PRK13915, putative glucosyl-3-phosphoglycerate synthase; Provisional	NA|432aa|up_4|LS974202.1_1425471_1426767_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|291aa|up_3|LS974202.1_1426760_1427633_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|432aa|up_2|LS974202.1_1427690_1428986_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|50aa|up_1|LS974202.1_1429753_1429903_-	NA	NA|365aa|up_0|LS974202.1_1430225_1431320_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|47aa|down_0|LS974202.1_1435225_1435366_+	NA	NA|158aa|down_1|LS974202.1_1435724_1436198_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	RT|301aa|down_2|LS974202.1_1436149_1437052_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|318aa|down_3|LS974202.1_1437450_1438404_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|270aa|down_4|LS974202.1_1438400_1439210_+	COG0434, SgcQ, Predicted TIM-barrel enzyme [General function prediction only]	NA|496aa|down_5|LS974202.1_1439206_1440694_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|320aa|down_6|LS974202.1_1440690_1441650_+	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins	NA|303aa|down_7|LS974202.1_1441664_1442573_+	cd01536, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of active transport systems that are members of the type 1 periplasmic binding protein (PBP1) superfamily	NA|481aa|down_8|LS974202.1_1442632_1444075_+	cd07804, FGGY_XK_like_1, uncharacterized xylulose kinase-like proteins; a subgroup of the FGGY family of carbohydrate kinases	NA|226aa|down_9|LS974202.1_1445249_1445927_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]
GCA_900157305.1_MESINF_chromoso	LS974202	Mesotoga infera isolate MESINF1 genome assembly, chromosome: MESINF	7	1434884-1435043	6	CRISPRCasFinder	no	RT	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	Unclear	GTTGAGCGAGAACCATAGTGGGATGGAAAC	30	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	NA|54aa|up_8|LS974202.1_1423027_1423189_-,NA|50aa|up_2|LS974202.1_1429753_1429903_-,NA|47aa|down_0|LS974202.1_1435225_1435366_+	NA|68aa|up_9|LS974202.1_1422331_1422535_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|54aa|up_8|LS974202.1_1423027_1423189_-	NA	NA|274aa|up_7|LS974202.1_1423450_1424272_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|400aa|up_6|LS974202.1_1424250_1425450_-	PRK13915, PRK13915, putative glucosyl-3-phosphoglycerate synthase; Provisional	NA|432aa|up_5|LS974202.1_1425471_1426767_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|291aa|up_4|LS974202.1_1426760_1427633_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|432aa|up_3|LS974202.1_1427690_1428986_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|50aa|up_2|LS974202.1_1429753_1429903_-	NA	NA|365aa|up_1|LS974202.1_1430225_1431320_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|365aa|up_0|LS974202.1_1433622_1434717_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|47aa|down_0|LS974202.1_1435225_1435366_+	NA	NA|158aa|down_1|LS974202.1_1435724_1436198_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	RT|301aa|down_2|LS974202.1_1436149_1437052_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|318aa|down_3|LS974202.1_1437450_1438404_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|270aa|down_4|LS974202.1_1438400_1439210_+	COG0434, SgcQ, Predicted TIM-barrel enzyme [General function prediction only]	NA|496aa|down_5|LS974202.1_1439206_1440694_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|320aa|down_6|LS974202.1_1440690_1441650_+	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins	NA|303aa|down_7|LS974202.1_1441664_1442573_+	cd01536, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of active transport systems that are members of the type 1 periplasmic binding protein (PBP1) superfamily	NA|481aa|down_8|LS974202.1_1442632_1444075_+	cd07804, FGGY_XK_like_1, uncharacterized xylulose kinase-like proteins; a subgroup of the FGGY family of carbohydrate kinases	NA|226aa|down_9|LS974202.1_1445249_1445927_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]
GCA_900157305.1_MESINF_chromoso	LS974202	Mesotoga infera isolate MESINF1 genome assembly, chromosome: MESINF	8	2925741-2927155	5,7,4	PILER-CR,CRISPRCasFinder,CRT	no	RT	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	Unclear	GTTGAGCGAGAACCATAGTGGGATGGAAAC,GTTGAGCGAGAACCATAGTGGGATGGAAAC,GTTGAGCGAGAACCATAGTGGGATGGAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	20,21,21	21	Orphan	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	NA|165aa|up_4|LS974202.1_2922566_2923061_-,NA|116aa|up_2|LS974202.1_2923560_2923908_+,NA|50aa|up_0|LS974202.1_2925288_2925438_-,NA|47aa|down_0|LS974202.1_2927806_2927947_+,NA|50aa|down_2|LS974202.1_2929833_2929983_+,NA|274aa|down_4|LS974202.1_2934094_2934916_+	NA|152aa|up_9|LS974202.1_2919804_2920260_-	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB)	NA|151aa|up_8|LS974202.1_2920261_2920714_-	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|158aa|up_7|LS974202.1_2920945_2921419_+	pfam12724, Flavodoxin_5, Flavodoxin domain	NA|200aa|up_6|LS974202.1_2921428_2922028_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|138aa|up_5|LS974202.1_2922024_2922438_+	COG3976, COG3976, Uncharacterized protein conserved in bacteria [Function unknown]	NA|165aa|up_4|LS974202.1_2922566_2923061_-	NA	NA|270aa|up_3|LS974202.1_2923083_2923893_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|116aa|up_2|LS974202.1_2923560_2923908_+	NA	NA|296aa|up_1|LS974202.1_2924081_2924969_+	PRK05416, PRK05416, RNase adapter RapZ	NA|50aa|up_0|LS974202.1_2925288_2925438_-	NA	NA|47aa|down_0|LS974202.1_2927806_2927947_+	NA	RT|442aa|down_1|LS974202.1_2928305_2929631_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|50aa|down_2|LS974202.1_2929833_2929983_+	NA	NA|1134aa|down_3|LS974202.1_2930678_2934080_+	cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain	NA|274aa|down_4|LS974202.1_2934094_2934916_+	NA	NA|379aa|down_5|LS974202.1_2934917_2936054_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|413aa|down_6|LS974202.1_2936057_2937296_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|412aa|down_7|LS974202.1_2937336_2938572_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|279aa|down_8|LS974202.1_2938573_2939410_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|357aa|down_9|LS974202.1_2939430_2940501_+	cd16012, ALP, Alkaline Phosphatase
GCA_900157305.1_MESINF_chromoso	LS974202	Mesotoga infera isolate MESINF1 genome assembly, chromosome: MESINF	9	2927401-2927631	5,8	CRT,CRISPRCasFinder	no	RT	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	Unclear	TGTTGAGCGAGAACCATAGTGGGATGGAAA,GTTGAGCGAGAACCATAGTGGGATGGAAAC	30,30	0	0	NA	NA	NA:NA	3,3	3	Orphan	DEDDh,cas6,Cas14u_CAS-V,RT,csa3,WYL,DinG,cas7,cas5,cas3,cas8b1,cas4,cas1,cas2,csm3gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,c2c10_CAS-V-U3,cas3HD	NA|165aa|up_4|LS974202.1_2922566_2923061_-,NA|116aa|up_2|LS974202.1_2923560_2923908_+,NA|50aa|up_0|LS974202.1_2925288_2925438_-,NA|47aa|down_0|LS974202.1_2927806_2927947_+,NA|50aa|down_2|LS974202.1_2929833_2929983_+,NA|274aa|down_4|LS974202.1_2934094_2934916_+	NA|152aa|up_9|LS974202.1_2919804_2920260_-	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB)	NA|151aa|up_8|LS974202.1_2920261_2920714_-	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|158aa|up_7|LS974202.1_2920945_2921419_+	pfam12724, Flavodoxin_5, Flavodoxin domain	NA|200aa|up_6|LS974202.1_2921428_2922028_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|138aa|up_5|LS974202.1_2922024_2922438_+	COG3976, COG3976, Uncharacterized protein conserved in bacteria [Function unknown]	NA|165aa|up_4|LS974202.1_2922566_2923061_-	NA	NA|270aa|up_3|LS974202.1_2923083_2923893_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|116aa|up_2|LS974202.1_2923560_2923908_+	NA	NA|296aa|up_1|LS974202.1_2924081_2924969_+	PRK05416, PRK05416, RNase adapter RapZ	NA|50aa|up_0|LS974202.1_2925288_2925438_-	NA	NA|47aa|down_0|LS974202.1_2927806_2927947_+	NA	RT|442aa|down_1|LS974202.1_2928305_2929631_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|50aa|down_2|LS974202.1_2929833_2929983_+	NA	NA|1134aa|down_3|LS974202.1_2930678_2934080_+	cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain	NA|274aa|down_4|LS974202.1_2934094_2934916_+	NA	NA|379aa|down_5|LS974202.1_2934917_2936054_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|413aa|down_6|LS974202.1_2936057_2937296_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|412aa|down_7|LS974202.1_2937336_2938572_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|279aa|down_8|LS974202.1_2938573_2939410_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|357aa|down_9|LS974202.1_2939430_2940501_+	cd16012, ALP, Alkaline Phosphatase
