assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900231475.1_LMNC088_complete_geno	LT985476	Listeria monocytogenes isolate LMNC088 complete genome genome assembly, chromosome: 1	1	546480-546960	1,1,1,2	CRT,CRISPRCasFinder,PILER-CR,PILER-CR	no	cas6,cas8b2,cas7,cas5,cas3,cas1,cas2	DinG,cas3,WYL,casR,cas6,cas8b2,cas7,cas5,cas1,cas2,DEDDh,csa3	Unclear	GTTTTAGTTACTTATTGTGAAATGTAAAT,TTTTAGTTACTTATTGTGAAATGTAAAT,TATAAGTTTTAGTTACTTATTGTGAAATGTAAATTTT,TGTTTTAGTTACTTATTGTGAAATGTAAAT	29,28,37,30	1	1	546509-546543	LT985476.1_2632459-2632493	I-A:I-A:I-A:I-A	7,7,4,4	7	Unclear	DinG,cas3,WYL,casR,cas6,cas8b2,cas7,cas5,cas1,cas2,DEDDh,csa3	NA|133aa|up_5|LT985476.1_541470_541869_+,NA|193aa|down_0|LT985476.1_547351_547930_+	NA|217aa|up_9|LT985476.1_537533_538184_+	COG0176, MipB, Transaldolase [Carbohydrate transport and metabolism]	NA|687aa|up_8|LT985476.1_538292_540353_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|201aa|up_7|LT985476.1_540356_540959_+	COG0794, GutQ, Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane]	NA|156aa|up_6|LT985476.1_540986_541454_+	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|133aa|up_5|LT985476.1_541470_541869_+	NA	NA|217aa|up_4|LT985476.1_541879_542530_+	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]	NA|349aa|up_3|LT985476.1_542526_543573_+	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases	NA|98aa|up_2|LT985476.1_543588_543882_+	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|424aa|up_1|LT985476.1_543896_545168_+	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism]	NA|312aa|up_0|LT985476.1_545307_546243_+	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|193aa|down_0|LT985476.1_547351_547930_+	NA	NA|227aa|down_1|LT985476.1_548037_548718_+	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain	NA|121aa|down_2|LT985476.1_548742_549105_-	TIGR02058, lin0512_fam, conserved hypothetical protein	NA|153aa|down_3|LT985476.1_549108_549567_-	pfam12802, MarR_2, MarR family	NA|612aa|down_4|LT985476.1_549948_551784_+	NF033186, internalin_K, class 1 internalin InlK	NA|145aa|down_5|LT985476.1_551881_552316_+	pfam00582, Usp, Universal stress protein family	NA|477aa|down_6|LT985476.1_552362_553793_-	COG2843, PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane]	NA|272aa|down_7|LT985476.1_553913_554729_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	cas6|241aa|down_8|LT985476.1_555081_555804_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas8b2|563aa|down_9|LT985476.1_555819_557508_+	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1
GCA_900231475.1_LMNC088_complete_geno	LT985476	Listeria monocytogenes isolate LMNC088 complete genome genome assembly, chromosome: 1	2	562157-563481	3,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas6,cas8b2,cas7,cas5,cas3,cas1,cas2	DinG,cas3,WYL,casR,cas6,cas8b2,cas7,cas5,cas1,cas2,DEDDh,csa3	Unclear	GTTTTAACTACTTATTATGAAATGTAAAT,GTTTTAACTACTTATTATGAAATGTAAAT,GTTTTAACTACTTATTATGAAATGTAAAT	29,29,29	2	2	562570-562604|563287-563321	LT985476.1_2649448-2649482|LT985476.1_2661138-2661104	I-A:I-A:I-A	19,20,20	20	Unclear	DinG,cas3,WYL,casR,cas6,cas8b2,cas7,cas5,cas1,cas2,DEDDh,csa3	NA,NA|148aa|down_5|LT985476.1_569026_569470_+,NA|492aa|down_9|LT985476.1_573779_575255_+	NA|145aa|up_9|LT985476.1_551881_552316_+	pfam00582, Usp, Universal stress protein family	NA|477aa|up_8|LT985476.1_552362_553793_-	COG2843, PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane]	NA|272aa|up_7|LT985476.1_553913_554729_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	cas6|241aa|up_6|LT985476.1_555081_555804_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas8b2|563aa|up_5|LT985476.1_555819_557508_+	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas7|290aa|up_4|LT985476.1_557497_558367_+	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP	cas5|261aa|up_3|LT985476.1_558344_559127_+	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas3|741aa|up_2|LT985476.1_559194_561417_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas1|81aa|up_1|LT985476.1_561433_561676_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|93aa|up_0|LT985476.1_561680_561959_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|123aa|down_0|LT985476.1_563553_563922_-	COG3759, COG3759, Predicted membrane protein [Function unknown]	NA|472aa|down_1|LT985476.1_564068_565484_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|335aa|down_2|LT985476.1_565614_566619_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|439aa|down_3|LT985476.1_566650_567967_-	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase	NA|251aa|down_4|LT985476.1_568167_568920_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|148aa|down_5|LT985476.1_569026_569470_+	NA	NA|554aa|down_6|LT985476.1_569515_571177_-	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|444aa|down_7|LT985476.1_571432_572764_+	COG5361, COG5361, Uncharacterized conserved protein [Function unknown]	NA|247aa|down_8|LT985476.1_572809_573550_-	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|492aa|down_9|LT985476.1_573779_575255_+	NA
