The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483371	Paucimonas lemoignei strain NCTC10937 genome assembly, chromosome: 1	5924472	297201	359708	5924472	portal,tail,lysis,capsid,integrase,head,protease,terminase	Pseudomonas_phage(55.56%)	65	294525:294550	365902:365927
294525:294550	attL	CTTCGCAGCCTTCGGCAGCTCCTACA	NA	NA	NA	NA
SQF93815.1|297201_298350_-|integrase	phage integrase site specific recombinase	integrase	V9IQN0	Stenotrophomonas_phage	39.7	1.8e-72
SQF93816.1|298346_298559_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF93817.1|298635_298902_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF93818.1|298968_299280_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF93819.1|299303_301997_-	Toprim domain-containing protein	NA	A0A2H4J936	uncultured_Caudovirales_phage	56.0	1.7e-302
SQF93820.1|301993_302233_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF93821.1|302305_302668_-	Uncharacterised protein	NA	A0A2H4J947	uncultured_Caudovirales_phage	47.5	1.3e-08
SQF93822.1|302664_303174_-	Uncharacterised protein	NA	A0A2H4JG61	uncultured_Caudovirales_phage	55.6	1.1e-40
SQF93823.1|303173_303386_-	phage-associated protein, BcepMu gp16 family	NA	A0A2H4JE67	uncultured_Caudovirales_phage	53.6	7.6e-09
SQF93824.1|303469_303820_+	Cro/Cl family transcriptional regulator	NA	NA	NA	NA	NA
SQF93825.1|304171_304420_-	phage transcriptional activator Ogr/delta	NA	A5X9H0	Aeromonas_virus	47.6	5.8e-16
SQF93826.1|304486_305518_-|portal	PBSX family phage portal protein	portal	A0A0U4B0L9	Pseudomonas_phage	78.4	1.3e-106
SQF93827.1|305526_307341_-|terminase	terminase, ATPase subunit	terminase	A0A0U4JIZ9	Pseudomonas_phage	73.3	3.8e-250
SQF93828.1|307502_308408_+	scaffold	NA	A0A0U4JVV6	Pseudomonas_phage	48.6	1.7e-65
SQF93829.1|308409_309426_+|capsid	P2 family phage major capsid protein	capsid	A0A0U4K5I9	Pseudomonas_phage	70.9	1.3e-130
SQF93830.1|309425_310157_+|terminase	putative terminase, endonuclease subunit	terminase	A0A0U4JEJ1	Pseudomonas_phage	64.9	1.7e-76
SQF93831.1|310258_310720_+|head	prophage PSPPH06 head completion/stabilization protein	head	A0A0U4J933	Pseudomonas_phage	60.1	1.9e-44
SQF93832.1|310716_311160_+|tail	prophage PSPPH06 tail protein	tail	A0A0U4IBS7	Pseudomonas_phage	65.5	7.6e-51
SQF93833.1|311149_311830_+	prophage PSPPH06, virion morphogenesis protein	NA	A0A0U4ISN1	Pseudomonas_phage	60.2	8.6e-62
SQF93834.1|311845_312964_+|tail	prophage PSPPH06 tail sheath protein	tail	A0A0U4KLE6	Pseudomonas_phage	63.8	5.5e-122
SQF93835.1|312970_313423_+|tail	prophage PSPPH06 tail tube protein	tail	A0A0U3TH58	Pseudomonas_phage	71.4	3.6e-56
SQF93836.1|313422_313635_+	prophage PSPPH06, DksA/TraR family C4-type zinc finger protein	NA	A0A0U4IIN4	Pseudomonas_phage	57.6	4.6e-14
SQF93837.1|313631_313838_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF93838.1|313834_314359_+	prophage PSPPH06 lysozyme	NA	E5AG95	Erwinia_phage	28.1	5.7e-05
SQF93839.1|314355_314865_+|lysis	prophage PSPPH06, lysis protein	lysis	A0A0U4JXC2	Pseudomonas_phage	44.4	4.2e-21
SQF93840.1|314903_315194_+	Protein of uncharacterised function (DUF2765)	NA	A0A0U4B0P2	Pseudomonas_phage	61.1	1.7e-22
SQF93841.1|315363_317418_+|tail	prophage PSPPH06, TP901 family tail tape measure protein	tail	A0A0U4IJ81	Pseudomonas_phage	46.2	1.3e-156
SQF93842.1|317414_317729_+	Protein of uncharacterised function (DUF2590)	NA	A0A0U4B0N5	Pseudomonas_phage	74.5	2.3e-33
SQF93843.1|317725_318895_+	Uncharacterized homolog of phage Mu protein gp47	NA	A0A0U4JJ14	Pseudomonas_phage	70.0	7.9e-156
SQF93844.1|318891_319491_+|tail	Bacteriophage P2-related tail formation protein	tail	A0A0U4JVX3	Pseudomonas_phage	68.0	8.6e-66
SQF93845.1|319501_321808_+|tail	putative tail fiber protein	tail	A0A0U4K5K2	Pseudomonas_phage	63.8	1.7e-48
SQF93847.1|321817_322327_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF93849.1|322344_323250_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF93851.1|323246_323786_+	nucleoid DNA-binding protein	NA	A0A0U4J942	Pseudomonas_phage	59.3	9.2e-51
SQF93853.1|323782_324493_+	Uncharacterised protein	NA	A0A2I7RNK1	Vibrio_phage	39.3	6.3e-39
SQF93855.1|324465_325437_+	Gp5 domain-containing protein	NA	A0A0U4IBV2	Pseudomonas_phage	63.7	3.9e-116
SQF93857.1|326291_326582_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF93859.1|326581_326827_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF93861.1|328300_328798_-	phage-associated protein	NA	I6R0L8	Salmonella_phage	35.1	5.0e-19
SQF93863.1|329452_330427_+	DnaJ domain-containing protein	NA	A0A2K9L1L4	Tupanvirus	45.0	3.5e-08
SQF93865.1|330728_331319_-	membrane protein	NA	NA	NA	NA	NA
SQF93867.1|331361_332204_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
SQF93870.1|332200_332887_-	pyridoxal phosphate enzyme, YggS family protein	NA	NA	NA	NA	NA
SQF93871.1|332942_333977_+	pilus retraction protein PilT	NA	NA	NA	NA	NA
SQF93874.1|334097_334787_-	NLP/P60 family protein	NA	A0A2H4PQY6	Streptomyces_phage	40.2	1.2e-15
SQF93876.1|335037_335457_+	TM2 domain-containing protein	NA	A0A223LG35	Aeromonas_phage	48.3	2.3e-09
SQF93878.1|335456_336059_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF93880.1|336216_337488_-	dihydroorotase	NA	NA	NA	NA	NA
SQF93882.1|337484_338489_-	aspartate carbamoyltransferase	NA	NA	NA	NA	NA
SQF93884.1|338513_339035_-	bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
SQF93886.1|339134_339575_-	holliday junction resolvase	NA	NA	NA	NA	NA
SQF93888.1|339574_340144_-	protein AlgH	NA	NA	NA	NA	NA
SQF93890.1|340220_341159_-	TonB domain-containing protein	NA	NA	NA	NA	NA
SQF93892.1|341380_342334_-	glutathione synthetase	NA	NA	NA	NA	NA
SQF93894.1|342589_343000_+	response regulator receiver	NA	NA	NA	NA	NA
SQF93896.1|343046_343412_+	twitching motility protein PilH	NA	W8CYM9	Bacillus_phage	37.6	6.7e-13
SQF93898.1|343425_343965_+	CheW-like protein	NA	NA	NA	NA	NA
SQF93900.1|344360_346403_+	chemotaxis sensory transducer	NA	NA	NA	NA	NA
SQF93902.1|346682_352682_+	response regulator receiver:CheW-like protein :ATP-binding region, ATPase-like:Hpt	NA	W8CYM9	Bacillus_phage	35.9	8.5e-12
SQF93904.1|352674_353142_+	CheW-like protein	NA	NA	NA	NA	NA
SQF93906.1|353168_353573_-	thioesterase family protein domain protein	NA	NA	NA	NA	NA
SQF93908.1|353953_355363_+	Adenosylhomocysteinase	NA	S4W1G4	Pandoravirus	30.0	5.2e-37
SQF93911.1|355551_356397_+	5,10-methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
SQF93912.1|356789_358718_+	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	30.1	1.0e-43
SQF93915.1|359129_359708_-|protease	protease PasP	protease	NA	NA	NA	NA
365902:365927	attR	CTTCGCAGCCTTCGGCAGCTCCTACA	NA	NA	NA	NA
>prophage 2
LS483371	Paucimonas lemoignei strain NCTC10937 genome assembly, chromosome: 1	5924472	3877201	3888420	5924472	tRNA	uncultured_Caudovirales_phage(66.67%)	12	NA	NA
SQF99357.1|3877201_3878236_+	acetylpolyamine aminohydrolase	NA	A0A2K9L0J7	Tupanvirus	35.4	2.0e-41
SQF99358.1|3878283_3879336_+	ornithine cyclodeaminase	NA	A0A1V0SL93	Klosneuvirus	49.7	8.8e-90
SQF99359.1|3879484_3880900_+	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA	NA
SQF99360.1|3881235_3881907_+	membrane protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	95.5	2.9e-110
SQF99361.1|3882008_3882401_+	sulfur transfer complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	82.2	1.0e-54
SQF99362.1|3882402_3882765_+	sulfur relay protein TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	64.2	8.7e-37
SQF99363.1|3882764_3883064_+	DsrH like protein	NA	A0A2H4JG28	uncultured_Caudovirales_phage	64.6	5.9e-31
SQF99364.1|3883060_3883396_+	DsrC-like protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	76.6	1.3e-42
SQF99365.1|3883392_3884394_+	glycosyl transferase	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	83.2	1.3e-162
SQF99366.1|3884488_3885496_+	glutathione S-transferase	NA	NA	NA	NA	NA
SQF99367.1|3885744_3887139_-	uroporphyrin-III C-methyltransferase, C-terminal:siroheme synthase, N-terminal	NA	NA	NA	NA	NA
SQF99368.1|3887139_3888420_-|tRNA	seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	54.8	1.1e-99
>prophage 3
LS483371	Paucimonas lemoignei strain NCTC10937 genome assembly, chromosome: 1	5924472	5501158	5507832	5924472		Enterobacteria_phage(50.0%)	7	NA	NA
SQG00703.1|5501158_5502220_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	58.2	5.4e-111
SQG00704.1|5502229_5502829_-	anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	64.7	1.5e-73
SQG00705.1|5503491_5504433_+	group 2 family glycosyltransferase	NA	NA	NA	NA	NA
SQG00706.1|5504436_5505507_+	DTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	48.5	1.6e-86
SQG00707.1|5505503_5506406_+	DTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	31.9	1.4e-22
SQG00708.1|5506402_5507290_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	59.9	2.1e-100
SQG00709.1|5507286_5507832_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.9	2.3e-49
>prophage 4
LS483371	Paucimonas lemoignei strain NCTC10937 genome assembly, chromosome: 1	5924472	5635721	5642558	5924472		Escherichia_phage(66.67%)	6	NA	NA
SQG00819.1|5635721_5636360_-	aldolase	NA	A0A077SK32	Escherichia_phage	47.0	2.3e-40
SQG00820.1|5636356_5637649_-	HopAN1 protein	NA	A0A077SLJ7	Escherichia_phage	43.1	7.8e-80
SQG00821.1|5637659_5638565_-	3-hydroxyisobutyrate dehydrogenase	NA	A0A077SLF7	Escherichia_phage	54.1	8.7e-78
SQG00822.1|5639260_5640082_-	regulatory protein, DeoR	NA	A0A077SK06	Escherichia_phage	43.5	4.7e-46
SQG00823.1|5640172_5641432_-	Sodium/hydrogen exchanger	NA	A0A2H4J178	uncultured_Caudovirales_phage	87.2	7.5e-112
SQG00824.1|5641628_5642558_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	30.8	3.0e-25
