The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483381	Streptococcus sobrinus strain NCTC10921 genome assembly, chromosome: 1	2145110	440537	501125	2145110	transposase,tRNA,integrase,protease	Streptococcus_phage(55.56%)	60	462280:462295	491536:491551
SQG19020.1|440537_441557_-|integrase	integrase core domain protein	integrase	A0A2K9V2S9	Faecalibacterium_phage	35.9	1.9e-36
SQG19021.1|441774_442551_-	TraX family protein	NA	NA	NA	NA	NA
SQG19022.1|442716_443019_+|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit C	tRNA	NA	NA	NA	NA
SQG19023.1|443018_444485_+|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit A	tRNA	NA	NA	NA	NA
SQG19024.1|444484_445927_+|tRNA	glutamyl tRNA-Gln amidotransferase chain B	tRNA	NA	NA	NA	NA
SQG19025.1|446851_447967_+	Methionine synthase II (cobalamin-independent)	NA	A0A218MNE0	uncultured_virus	40.3	4.5e-68
SQG19026.1|449399_450275_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG19027.1|450343_451099_-	3-oxoacyl-[acyl-carrier protein] reductase	NA	NA	NA	NA	NA
SQG19028.1|451638_452364_+	prophage pi3 protein 59	NA	A8ASM1	Listeria_phage	38.8	1.5e-11
SQG19029.1|452515_453058_+	phosphoribosylformylglycinamidine	NA	NA	NA	NA	NA
SQG19030.1|453198_453513_-	Plasmid stabilisation system protein	NA	NA	NA	NA	NA
SQG19051.1|453505_453766_-	prevent-host-death family protein	NA	NA	NA	NA	NA
SQG19054.1|454218_454746_+	HAD superfamily hydrolase	NA	NA	NA	NA	NA
SQG19056.1|454745_455864_+	ribosome biogenesis GTPase YqeH	NA	NA	NA	NA	NA
SQG19058.1|455879_456251_+	Predicted methylated DNA-protein cysteine methyltransferase	NA	NA	NA	NA	NA
SQG19060.1|456297_456609_+	ancient RNA-binding IF3-C fold protein	NA	NA	NA	NA	NA
SQG19062.1|456763_457396_+	nicotinate nucleotide adenylyltransferase	NA	NA	NA	NA	NA
SQG19064.1|457395_457989_+	HD domain-containing protein	NA	NA	NA	NA	NA
SQG19066.1|457994_458477_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19068.1|458494_458848_+	iojap family protein	NA	NA	NA	NA	NA
SQG19070.1|458894_459632_+	SAM dependent methyltransferase	NA	NA	NA	NA	NA
SQG19072.1|459824_460922_+	putative nucleotidyltransferase	NA	NA	NA	NA	NA
SQG19074.1|460926_461172_+	antitoxin of toxin-antitoxin stability system	NA	NA	NA	NA	NA
SQG19075.1|461236_462616_+	Uncharacterised protein	NA	NA	NA	NA	NA
462280:462295	attL	TAAGGAAGGAAAGAAA	NA	NA	NA	NA
SQG19077.1|462799_463414_+	Transcriptional regulator, MerR family	NA	NA	NA	NA	NA
SQG19079.1|463531_463873_+|transposase	transposase for insertion sequence element IS629	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	52.2	1.9e-25
SQG19081.1|463956_464892_-|integrase	putative integrase protein	integrase	W5R8L2	Staphylococcus_phage	54.3	1.1e-86
SQG19083.1|465373_467476_+|protease	Clp-like ATP-dependent protease, ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.7	1.5e-117
SQG19084.1|467909_468755_+	NmrA-like dehydrogenase/reductase	NA	NA	NA	NA	NA
SQG19086.1|468987_469362_-	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, subunit DhaM; DHA-specific IIA component	NA	NA	NA	NA	NA
SQG19088.1|469362_469941_-	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, ADP-binding subunit DhaL	NA	NA	NA	NA	NA
SQG19090.1|469979_470969_-	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, dihydroxyacetone binding subunit DhaK	NA	NA	NA	NA	NA
SQG19092.1|471397_472117_+	YebC/PmpR family DNA-binding regulatory protein	NA	NA	NA	NA	NA
SQG19094.1|472576_473572_-	MDR permease	NA	NA	NA	NA	NA
SQG19096.1|473740_474838_+	transcriptional regulator	NA	NA	NA	NA	NA
SQG19098.1|474856_475387_+	transcriptional regulator	NA	NA	NA	NA	NA
SQG19100.1|475590_476250_+	acetoin utilization protein	NA	M1NSC5	Streptococcus_phage	63.9	1.0e-72
SQG19103.1|476378_477032_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	64.7	1.8e-69
SQG19105.1|477034_477898_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	53.8	3.5e-76
SQG19107.1|477894_478695_+	signal peptidase II	NA	NA	NA	NA	NA
SQG19110.1|478687_479008_+	DNA replication intiation control protein	NA	M1PFV3	Streptococcus_phage	55.7	7.9e-26
SQG19112.1|479011_479878_+	putative S-adenosyl-methionine-dependent methyl transferase, YraL family	NA	M1PLC5	Streptococcus_phage	73.3	2.7e-116
SQG19113.1|480097_481333_+	ammonium transporter	NA	NA	NA	NA	NA
SQG19115.1|481400_481742_+	nitrogen regulatory protein P-II 1	NA	NA	NA	NA	NA
SQG19117.1|481963_484645_+	aconitate hydratase	NA	NA	NA	NA	NA
SQG19119.1|484686_485805_+	citrate synthase	NA	NA	NA	NA	NA
SQG19120.1|485809_486991_+	isocitrate dehydrogenase	NA	NA	NA	NA	NA
SQG19122.1|487548_488643_+	phosphoserine transaminase	NA	M1Q1P2	Streptococcus_phage	79.1	1.0e-165
SQG19124.1|488682_489231_+	GNAT family acetyltransferase	NA	M1PSC3	Streptococcus_phage	60.7	5.5e-59
SQG19125.1|489562_490741_+	D-3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	78.2	4.1e-176
SQG19127.1|490817_491048_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19129.1|491044_491578_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	52.1	8.3e-44
491536:491551	attR	TAAGGAAGGAAAGAAA	NA	NA	NA	NA
SQG19130.1|491552_491909_+	Arsenate reductase	NA	M1PLC0	Streptococcus_phage	59.8	6.1e-35
SQG19132.1|492023_492887_+	MutR family transcriptional regulator	NA	NA	NA	NA	NA
SQG19134.1|493228_493654_+|transposase	transposase of family protein	transposase	A0A1P8BMC0	Lactococcus_phage	36.0	2.6e-16
SQG19136.1|494115_494265_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19137.1|494824_496432_+	ABC transporter	NA	W8CYL7	Bacillus_phage	25.2	3.0e-12
SQG19139.1|496498_499126_+	lantibiotic synthetase protein	NA	NA	NA	NA	NA
SQG19141.1|499161_500430_+	prolyl oligopeptidase family protein	NA	NA	NA	NA	NA
SQG19143.1|500507_501125_+|protease	protease II	protease	NA	NA	NA	NA
>prophage 2
LS483381	Streptococcus sobrinus strain NCTC10921 genome assembly, chromosome: 1	2145110	647534	698869	2145110	transposase,integrase,protease	Tupanvirus(50.0%)	43	642094:642108	687930:687944
642094:642108	attL	TCAATATCCGAGTGG	NA	NA	NA	NA
SQG19445.1|647534_648554_+|integrase	integrase core domain protein	integrase	A0A2K9V2S9	Faecalibacterium_phage	35.5	3.2e-36
SQG19447.1|648706_650872_+	penicillin-binding protein 2B	NA	NA	NA	NA	NA
SQG19449.1|650944_651541_+	recombination protein RecR	NA	NA	NA	NA	NA
SQG19451.1|651582_652143_-	quinone family NAD(P)H dehydrogenase	NA	NA	NA	NA	NA
SQG19453.1|652139_652736_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
SQG19455.1|652912_653386_+	transcriptional regulator	NA	NA	NA	NA	NA
SQG19457.1|653382_654621_+	BAAT / acyl-CoA thioester hydrolase	NA	NA	NA	NA	NA
SQG19459.1|654701_656096_-|transposase	transposase	transposase	NA	NA	NA	NA
SQG19461.1|656470_657517_+	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
SQG19464.1|657706_658660_+	bile acid transporter	NA	NA	NA	NA	NA
SQG19466.1|658792_659356_-	membrane protein	NA	NA	NA	NA	NA
SQG19467.1|659889_661254_+	UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase	NA	NA	NA	NA	NA
SQG19469.1|661277_661958_+	hypothetical membrane spanning protein	NA	NA	NA	NA	NA
SQG19471.1|662170_662473_-	role in replication	NA	NA	NA	NA	NA
SQG19473.1|663513_665175_+	metallo-beta-lactamase superfamily protein	NA	NA	NA	NA	NA
SQG19475.1|665264_666050_+	putative tributyrin esterase	NA	NA	NA	NA	NA
SQG19477.1|666157_666874_+|protease	membrane-associated proteases	protease	NA	NA	NA	NA
SQG19480.1|666882_667251_+	membrane protein	NA	NA	NA	NA	NA
SQG19482.1|667394_669323_+	ATP-binding cassette, sub-family F, member 3	NA	A0A2K9L3Z8	Tupanvirus	28.2	8.1e-49
SQG19484.1|669745_670714_+	Pyruvate dehydrogenase E1 component alpha subunit	NA	NA	NA	NA	NA
SQG19486.1|671201_672200_+	pyruvate dehydrogenase E1 component subunit beta	NA	NA	NA	NA	NA
SQG19488.1|672303_673701_+	branched-chain alpha-keto acid dehydrogenase E2 subunit	NA	NA	NA	NA	NA
SQG19490.1|673897_675655_+	dihydrolipoamide dehydrogenase	NA	NA	NA	NA	NA
SQG19491.1|675768_676761_+	lipoate-protein ligase	NA	NA	NA	NA	NA
SQG19493.1|676987_678853_+	Glucan-binding protein C	NA	NA	NA	NA	NA
SQG19495.1|679079_679313_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19497.1|679539_681438_+	Glucan-binding protein C	NA	NA	NA	NA	NA
SQG19499.1|681647_682436_-	CobB/CobQ-like glutamine amidotransferase	NA	NA	NA	NA	NA
SQG19501.1|682435_683779_-	UDP-N-acetylmuramyl tripeptide synthase	NA	NA	NA	NA	NA
SQG19502.1|684101_684335_-	transglycosylase-associated membrane protein	NA	NA	NA	NA	NA
SQG19504.1|684920_685778_+	membrane protein	NA	NA	NA	NA	NA
SQG19506.1|685767_686757_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQG19508.1|686809_688162_+	Phosphoglucosamine mutase	NA	NA	NA	NA	NA
687930:687944	attR	TCAATATCCGAGTGG	NA	NA	NA	NA
SQG19509.1|688254_688983_+	putative ribosomal small subunit pseudouridine synthase A	NA	NA	NA	NA	NA
SQG19511.1|689034_689160_+	membrane protein	NA	NA	NA	NA	NA
SQG19514.1|689217_690531_+	GTPase ObgE	NA	NA	NA	NA	NA
SQG19516.1|691062_691251_+	putative extracellular protein	NA	NA	NA	NA	NA
SQG19518.1|691381_692887_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	23.2	4.1e-24
SQG19520.1|693313_694708_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG19522.1|694820_695561_-	polar amino acid transport system ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.9	4.4e-35
SQG19523.1|695560_697753_-	amino acid ABC transporter amino acid-binding/permease	NA	NA	NA	NA	NA
SQG19525.1|697928_698168_+|protease	CAAX amino terminal protease family protein	protease	NA	NA	NA	NA
SQG19527.1|698122_698869_+|protease	CAAX amino terminal protease family protein	protease	NA	NA	NA	NA
>prophage 3
LS483381	Streptococcus sobrinus strain NCTC10921 genome assembly, chromosome: 1	2145110	907612	1010958	2145110	tRNA,transposase,holin,bacteriocin,protease	Streptococcus_phage(13.04%)	106	NA	NA
SQG19807.1|907612_908764_+|holin	Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA	holin	F2Y1V5	Organic_Lake_phycodnavirus	32.7	2.3e-14
SQG19808.1|908763_909402_+	osmoprotectant ABC transporter	NA	NA	NA	NA	NA
SQG19809.1|909401_910337_+	ABC transporter	NA	NA	NA	NA	NA
SQG19810.1|910337_911003_+|holin	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD	holin	NA	NA	NA	NA
SQG19811.1|911301_912672_+	NADH oxidase H2O-forming	NA	NA	NA	NA	NA
SQG19812.1|913005_913995_-	lactate dehydrogenase	NA	NA	NA	NA	NA
SQG19814.1|914200_916669_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	1.7e-104
SQG19815.1|916655_917432_+	sortase	NA	NA	NA	NA	NA
SQG19816.1|917854_918232_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19817.1|918308_920027_-	putative phosphoglucomutase	NA	A0A1X9I671	Streptococcus_phage	79.9	3.7e-263
SQG19818.1|920709_921282_-	membrane protein	NA	NA	NA	NA	NA
SQG19819.1|921265_921820_-	phosphopantothenoylcysteine decarboxylase	NA	Q9J5A8	Fowlpox_virus	36.1	3.3e-27
SQG19820.1|921812_922499_-	phosphopantothenate--cysteine ligase	NA	NA	NA	NA	NA
SQG19821.1|922676_924347_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
SQG19823.1|925152_926472_+	Putative Dihydrolipoamide dehydrogenase; Mercuric ion reductase; PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	45.1	1.1e-100
SQG19824.1|926711_928232_+	cardiolipin synthetase (Cardiolipin synthase) (CL synthase)	NA	NA	NA	NA	NA
SQG19825.1|928540_929275_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SQG19826.1|929382_929907_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19827.1|930165_931242_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
SQG19828.1|931593_932541_+	dihydrodipicolinate synthase	NA	NA	NA	NA	NA
SQG19829.1|932728_933067_+	oxygen-sensitive ribonucleoside-triphosphate reductase	NA	A0A248SK58	Salicola_phage	34.5	4.8e-05
SQG19830.1|933386_934667_-	GntR family aminotransferase	NA	A0A1X9I5H2	Streptococcus_phage	52.6	2.1e-109
SQG19832.1|934782_935289_+	Predicted membrane protein	NA	NA	NA	NA	NA
SQG19833.1|935420_936272_+	GTPase YlqF	NA	NA	NA	NA	NA
SQG19834.1|936258_937026_+	ribonuclease HII	NA	R4THQ2	Phaeocystis_globosa_virus	40.3	1.0e-23
SQG19835.1|937227_937644_+	acetyltransferase	NA	NA	NA	NA	NA
SQG19836.1|937684_939172_+	maltose O-acetyltransferase	NA	NA	NA	NA	NA
SQG19837.1|939380_940220_+	DNA processing Smf protein	NA	S6BFL3	Thermus_phage	44.8	9.4e-34
SQG19838.1|941195_943340_+	DNA topoisomerase I	NA	A0A1V0SCS0	Indivirus	36.8	4.1e-102
SQG19840.1|943503_944883_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19841.1|945073_945688_+	lipase/acylhydrolase	NA	NA	NA	NA	NA
SQG19842.1|947005_947845_+	hydrolase	NA	NA	NA	NA	NA
SQG19843.1|948049_948721_+	aminocarboxymuconate-semialdehyde decarboxylase	NA	NA	NA	NA	NA
SQG19844.1|949101_949335_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19845.1|949439_949628_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQG19846.1|950040_950544_+	acid phosphatase	NA	NA	NA	NA	NA
SQG19847.1|950658_951402_+	response regulator	NA	NA	NA	NA	NA
SQG19849.1|951404_952751_+	histidine kinase of the competence regulon, ComD	NA	NA	NA	NA	NA
SQG19850.1|952868_953642_-	BlpC ABC transporter	NA	NA	NA	NA	NA
SQG19851.1|953654_955802_-	competence factor transporting ATP-binding protein/permease ComA	NA	W8CYL7	Bacillus_phage	28.0	4.2e-38
SQG19853.1|956118_956310_+	Bacteriocin class II with double-glycine leader peptide	NA	NA	NA	NA	NA
SQG19854.1|956366_956558_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
SQG19855.1|956585_956771_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19857.1|957115_957376_-|transposase	IS1191, transposase, IS256 family	transposase	NA	NA	NA	NA
SQG19858.1|957400_957829_-|transposase	truncated IS1191 transposase	transposase	A0A0N9STL0	Staphylococcus_phage	30.3	1.2e-08
SQG19859.1|957853_958177_-	Transposase for insertion sequence element IS905B	NA	A0A0N9STL0	Staphylococcus_phage	31.2	1.8e-09
SQG19860.1|958652_959057_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19861.1|959106_960141_+|bacteriocin	putative bacteriocin	bacteriocin	NA	NA	NA	NA
SQG19862.1|960424_960850_+|transposase	IS200 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	34.4	3.8e-15
SQG19863.1|961213_961477_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19864.1|961713_962154_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19865.1|962276_962567_+	Enterocin A Immunity	NA	NA	NA	NA	NA
SQG19867.1|962602_962899_+|bacteriocin	putative bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
SQG19868.1|963457_963922_+	membrane protein	NA	NA	NA	NA	NA
SQG19870.1|964342_965494_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SQG19872.1|965499_966204_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	4.3e-32
SQG19873.1|966216_967458_+	ABC transporter permease	NA	NA	NA	NA	NA
SQG19874.1|967936_969157_+	PTS cellobiose-specific IIC component	NA	NA	NA	NA	NA
SQG19876.1|969140_969986_+	cell surface hydrolase (putative)	NA	NA	NA	NA	NA
SQG19878.1|970050_970863_+	putative oxidoreductase	NA	NA	NA	NA	NA
SQG19879.1|971208_971556_-	SnoaL-like domain	NA	NA	NA	NA	NA
SQG19881.1|971654_971966_+	transcriptional regulator	NA	NA	NA	NA	NA
SQG19882.1|972131_972404_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
SQG19884.1|972415_972655_+	RNA binding protein	NA	NA	NA	NA	NA
SQG19886.1|973241_973886_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQG19888.1|973882_974416_+	transcriptional regulator	NA	NA	NA	NA	NA
SQG19890.1|974447_975425_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19892.1|976266_976470_-	CsbD-like protein	NA	NA	NA	NA	NA
SQG19893.1|976658_977483_-|transposase	ISSth1, transposase (orf2), IS3 family	transposase	A0A1B1P773	Bacillus_phage	33.9	1.6e-17
SQG19894.1|977479_978166_-|transposase	transposase	transposase	NA	NA	NA	NA
SQG19895.1|978207_978669_-	Protein of uncharacterised function (DUF3290)	NA	NA	NA	NA	NA
SQG19896.1|979215_979737_+	16S_rRNA processing protein RimM	NA	NA	NA	NA	NA
SQG19897.1|979726_980467_+|tRNA	tRNA (guanine-N(1)-)-methyltransferase	tRNA	NA	NA	NA	NA
SQG19898.1|980459_981458_+	thioredoxin reductase	NA	Q9JRK7	Streptococcus_phage	54.0	1.4e-31
SQG19899.1|982152_982869_+	putative acetyltransferase	NA	NA	NA	NA	NA
SQG19900.1|983274_983988_+	DeoR family transcriptional regulator, fructose operon transcriptional repressor	NA	NA	NA	NA	NA
SQG19901.1|983984_984896_+	1-phosphofructokinase	NA	NA	NA	NA	NA
SQG19902.1|984892_986851_+	PTS system fructose-specific transporter subunit IIABC	NA	NA	NA	NA	NA
SQG19903.1|987017_987713_+	putative DNA repair protein	NA	A0A1B2LRS6	Wolbachia_phage	26.1	1.1e-14
SQG19904.1|987854_988547_-	glutamine amidotransferase	NA	NA	NA	NA	NA
SQG19905.1|988627_989266_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
SQG19906.1|989544_989892_-	cysteine desulfurase	NA	NA	NA	NA	NA
SQG19907.1|989901_991023_-	cysteine desufurase	NA	A0A1X7QGF3	Faustovirus	27.2	8.1e-25
SQG19908.1|991024_991990_-	Ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	35.1	1.6e-37
SQG19909.1|992945_993518_-	adenylate cyclase family protein	NA	NA	NA	NA	NA
SQG19910.1|993647_994313_+	GTP pyrophosphokinase (RelA)	NA	NA	NA	NA	NA
SQG19911.1|994287_995130_+	NAD kinase	NA	NA	NA	NA	NA
SQG19912.1|995126_996017_+	ribosomal large subunit pseudouridine synthase	NA	NA	NA	NA	NA
SQG19913.1|996033_997017_+	phosphotransacetylase	NA	NA	NA	NA	NA
SQG19914.1|997151_997907_+	oxidoreductase	NA	NA	NA	NA	NA
SQG19915.1|997926_998109_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19916.1|998205_998592_-	Na+ driven multidrug efflux pump	NA	NA	NA	NA	NA
SQG19917.1|998738_999584_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
SQG19918.1|999779_1000670_+	lactate/malate dehydrogenase, NAD binding domain protein	NA	NA	NA	NA	NA
SQG19919.1|1000822_1001734_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
SQG19920.1|1001739_1002906_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
SQG19921.1|1003105_1003945_+	thymidylate synthase	NA	U5J9N5	Bacillus_phage	52.5	2.1e-81
SQG19922.1|1004028_1004550_+	dihydrofolate reductase	NA	A0A1B2IFI7	Erwinia_phage	30.7	9.3e-16
SQG19923.1|1004564_1004735_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQG19924.1|1004756_1005989_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.4	1.4e-134
SQG19925.1|1005998_1006598_+	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA	NA
SQG19926.1|1006905_1008279_+	amino acid permease	NA	NA	NA	NA	NA
SQG19927.1|1008332_1009304_+	homocysteine methyltransferase	NA	NA	NA	NA	NA
SQG19928.1|1009633_1010134_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
SQG19929.1|1010207_1010576_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
SQG19930.1|1010802_1010958_-|transposase	transposase IS861 orfB	transposase	NA	NA	NA	NA
>prophage 4
LS483381	Streptococcus sobrinus strain NCTC10921 genome assembly, chromosome: 1	2145110	1139084	1149675	2145110	tRNA	Bacillus_phage(28.57%)	8	NA	NA
SQG20152.1|1139084_1140191_+	transcriptional regulator	NA	A0A2K9VDE3	Lactobacillus_phage	42.1	2.6e-76
SQG20154.1|1140281_1141028_+	nicotinamide mononucleotide transporter	NA	A0A1C9LW09	Vibrio_phage	30.1	3.0e-15
SQG20155.1|1141024_1141789_+	mutT/nudix family protein	NA	G3MA14	Bacillus_virus	33.2	2.2e-21
SQG20157.1|1141956_1143708_-	ABC transporter permease	NA	W8CYL7	Bacillus_phage	30.2	1.9e-57
SQG20159.1|1143957_1145694_-	ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.9	8.4e-37
SQG20161.1|1146031_1146418_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG20163.1|1146481_1148368_-	ABC transporter domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	32.5	7.9e-65
SQG20164.1|1148469_1149675_-|tRNA	tRNA CCA-pyrophosphorylase	tRNA	H7BUW3	unidentified_phage	47.3	6.9e-38
>prophage 5
LS483381	Streptococcus sobrinus strain NCTC10921 genome assembly, chromosome: 1	2145110	1256720	1264116	2145110	protease	Streptococcus_phage(50.0%)	8	NA	NA
SQG20339.1|1256720_1257377_-	3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.8	2.8e-86
SQG20340.1|1257405_1258566_-	putative SAM-dependent methyl transferase	NA	W6LLI2	Streptococcus_phage	69.1	6.9e-152
SQG20341.1|1258683_1260837_+	membrane-bound sulfatase	NA	W6LM83	Streptococcus_phage	68.5	1.6e-263
SQG20342.1|1261101_1261719_-|protease	CAAX amino protease	protease	NA	NA	NA	NA
SQG20343.1|1261887_1262202_-	phosphoribosyl-ATP pyrophosphohydrolase	NA	NA	NA	NA	NA
SQG20344.1|1262318_1262639_-	phosphoribosyl-AMP cyclohydrolase	NA	A0A2H4UVM0	Bodo_saltans_virus	30.8	2.6e-08
SQG20345.1|1262635_1263394_-	imidazole glycerol phosphate synthase subunit HisF	NA	A0A2H4UVM0	Bodo_saltans_virus	24.7	2.8e-05
SQG20346.1|1263396_1264116_-	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	NA	A0A2H4UVM0	Bodo_saltans_virus	24.8	2.8e-10
>prophage 6
LS483381	Streptococcus sobrinus strain NCTC10921 genome assembly, chromosome: 1	2145110	1474512	1543833	2145110	transposase,tRNA,integrase	Staphylococcus_phage(12.5%)	59	1475449:1475508	1495700:1495794
SQG20662.1|1474512_1475448_-|integrase	putative integrase protein	integrase	W5R8L2	Staphylococcus_phage	54.0	2.0e-85
1475449:1475508	attL	AGTTTTTCCTCGGGTTCTGTTTGTGTGGTTACTTACAGTTTACACCAATGAAACGCTATG	NA	NA	NA	NA
SQG20664.1|1475660_1476482_-	esterase	NA	NA	NA	NA	NA
SQG20666.1|1476999_1478178_-	carbamoyl-phosphate synthase L chain, ATP binding domain	NA	NA	NA	NA	NA
SQG20668.1|1478340_1478994_+	hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	56.2	1.7e-67
SQG20670.1|1479596_1480514_-|transposase	ISSag8, transposase	transposase	A0A1X9I5T2	Streptococcus_phage	69.6	1.1e-125
SQG20673.1|1480641_1483323_-	ions and phospholipids transporting ATPase	NA	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	28.9	2.0e-69
SQG20675.1|1483538_1484708_-	sialidase B (Neuraminidase B)	NA	NA	NA	NA	NA
SQG20677.1|1484762_1485662_-	4-hydroxythreonine-4-phosphate dehydrogenase 2	NA	NA	NA	NA	NA
SQG20679.1|1485711_1486950_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQG20681.1|1487110_1487359_+	Propionate catabolism activator	NA	NA	NA	NA	NA
SQG20683.1|1487461_1488892_+	Transcriptional regulatory protein ZraR	NA	NA	NA	NA	NA
SQG20686.1|1489010_1489400_-	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG20688.1|1489529_1490822_+	phosphohydrolase	NA	E3T4P8	Cafeteria_roenbergensis_virus	31.8	7.7e-27
SQG20690.1|1491435_1492245_+	phosphatase yidA	NA	NA	NA	NA	NA
SQG20692.1|1492244_1493459_+	peptidoglycan branched peptide synthesis protein, serine/alanine adding enzyme	NA	NA	NA	NA	NA
SQG20696.1|1493455_1494688_+	peptidoglycan branched peptide synthesis protein, alanine adding enzyme	NA	NA	NA	NA	NA
SQG20699.1|1494763_1495699_-|integrase	putative integrase protein	integrase	W5R8L2	Staphylococcus_phage	54.0	4.5e-85
SQG20701.1|1496045_1496210_+	Uncharacterised protein	NA	NA	NA	NA	NA
1495700:1495794	attR	AGTTTTTCCTCGGGTTCTGTTTGTGTGGTTACTTACAGTTTACACCAATGAAACGCTATGAGTTTTTTTGTTGCACTATATTTTACAATTTATCA	NA	NA	NA	NA
SQG20703.1|1496512_1497175_+	RevS (revS)	NA	NA	NA	NA	NA
SQG20705.1|1497284_1498043_-	triosephosphate isomerase	NA	NA	NA	NA	NA
SQG20708.1|1498140_1498875_-	Histidinol phosphatase and related hydrolases ofthe PHP family	NA	NA	NA	NA	NA
SQG20711.1|1499826_1500585_+	N-acetylmuramidase	NA	Q9ZXE4	Bacillus_phage	40.5	1.4e-17
SQG20713.1|1500692_1502123_-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
SQG20716.1|1502345_1504079_-	phosphoenolpyruvate-protein phosphotransferase	NA	NA	NA	NA	NA
SQG20718.1|1504083_1504347_-	Phosphotransferase system, phosphocarrier protein HPr	NA	NA	NA	NA	NA
SQG20721.1|1504870_1505095_+	ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit	NA	A0A0M7REK7	Lactobacillus_phage	44.0	5.9e-12
SQG20724.1|1505181_1507341_+	ribonucleotide-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	61.8	3.5e-258
SQG20727.1|1507807_1508767_+	ribonucleotide-diphosphate reductase, subunit beta	NA	A0A096XT60	Enterococcus_phage	68.9	5.9e-125
SQG20729.1|1508929_1509292_+	effector of murein hydrolase LrgA	NA	NA	NA	NA	NA
SQG20731.1|1509295_1509991_+	murein hydrolase export regulator	NA	NA	NA	NA	NA
SQG20734.1|1510245_1510407_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG20743.1|1510646_1511777_-	acetylornithine aminotransferase	NA	A0A1V0SKB7	Klosneuvirus	27.0	1.7e-22
SQG20745.1|1511826_1512561_-	acetylglutamate kinase	NA	NA	NA	NA	NA
SQG20746.1|1512781_1513975_-	glutamate N-acetyltransferase/amino-acid acetyltransferase	NA	NA	NA	NA	NA
SQG20748.1|1514048_1515071_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
SQG20750.1|1515315_1515840_-	lipoprotein	NA	NA	NA	NA	NA
SQG20752.1|1516188_1517088_+|transposase	transposase IS1239	transposase	H7BWC8	unidentified_phage	34.4	5.9e-34
SQG20754.1|1517164_1518820_-	DNA repair ATPase	NA	NA	NA	NA	NA
SQG20757.1|1518833_1519304_-	argR1, arginine repressor	NA	NA	NA	NA	NA
SQG20759.1|1519290_1520118_-	putative hemolysin	NA	NA	NA	NA	NA
SQG20761.1|1520110_1520977_-	dimethylallyltransferase	NA	NA	NA	NA	NA
SQG20763.1|1520969_1521194_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
SQG20765.1|1521168_1522512_-	exodeoxyribonuclease VII large subunit	NA	L7RDW5	Acanthamoeba_polyphaga_moumouvirus	31.3	4.2e-36
SQG20768.1|1523008_1523836_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG20770.1|1524148_1524361_-|tRNA	bacterial seryl-tRNA synthetase related protein	tRNA	NA	NA	NA	NA
SQG20772.1|1524600_1525890_-	peptidase, U32 family	NA	Q6DW11	Phage_TP	32.2	7.9e-40
SQG20774.1|1527172_1527406_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG20776.1|1527472_1527712_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG20779.1|1528606_1529611_+	putative methyltransferase	NA	NA	NA	NA	NA
SQG20781.1|1529795_1530680_-	malolactic fermentation system transcriptional regulator	NA	NA	NA	NA	NA
SQG20784.1|1530835_1532458_+	malate dehydrogenase	NA	NA	NA	NA	NA
SQG20786.1|1532477_1533749_+	malate transporter	NA	NA	NA	NA	NA
SQG20790.1|1533805_1534057_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG20792.1|1534084_1534450_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQG20794.1|1534731_1536300_-	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	4.6e-58
SQG20796.1|1536669_1541370_-	cell surface antigen	NA	NA	NA	NA	NA
SQG20798.1|1541787_1542360_+	putative proton-coupled thiamine transporter YuaJ	NA	NA	NA	NA	NA
SQG20800.1|1542550_1543000_+|transposase	transposase IS861 orfA	transposase	NA	NA	NA	NA
SQG20802.1|1543224_1543833_+|transposase	transposase IS861 orfB	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	51.0	2.6e-49
>prophage 7
LS483381	Streptococcus sobrinus strain NCTC10921 genome assembly, chromosome: 1	2145110	1609733	1617782	2145110	transposase	Staphylococcus_phage(50.0%)	9	NA	NA
SQG20887.1|1609733_1610516_+	ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA	NA	A0A2H4PQG7	Staphylococcus_phage	26.7	2.4e-15
SQG20889.1|1610734_1611283_-	SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	39.0	1.8e-33
SQG20890.1|1611279_1612212_-	putative radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	49.3	1.1e-35
SQG20891.1|1612644_1613658_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	69.8	4.6e-112
SQG20892.1|1613779_1614349_-	nickel-cobalt-cadmium resistance protein; NccN	NA	NA	NA	NA	NA
SQG20893.1|1614452_1615103_-	abpB-like dipeptidase lipoprotein	NA	NA	NA	NA	NA
SQG20894.1|1615099_1615489_-	putative ComB	NA	NA	NA	NA	NA
SQG20895.1|1615502_1615931_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.6	5.3e-09
SQG20897.1|1615949_1617782_-	ABC transporter, ATP-binding protein ComA	NA	W8CYL7	Bacillus_phage	24.0	2.3e-21
>prophage 8
LS483381	Streptococcus sobrinus strain NCTC10921 genome assembly, chromosome: 1	2145110	1772762	1841040	2145110	tRNA,integrase,transposase,bacteriocin,protease	Streptococcus_phage(21.43%)	60	1796002:1796019	1849681:1849698
SQG21225.1|1772762_1773353_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	54.1	6.3e-53
SQG21227.1|1773896_1774526_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
SQG21228.1|1774929_1776084_-	class II aminotransferase	NA	NA	NA	NA	NA
SQG21230.1|1776176_1777271_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
SQG21232.1|1777412_1778510_-	transcriptional regulator	NA	NA	NA	NA	NA
SQG21234.1|1778613_1779960_+	MDR permease	NA	NA	NA	NA	NA
SQG21236.1|1780075_1781704_-	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
SQG21238.1|1782035_1783487_+	UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase	NA	NA	NA	NA	NA
SQG21239.1|1784036_1784822_+	iron complex transport system ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	32.9	8.0e-19
SQG21241.1|1784843_1785770_+	iron complex transport system substrate-binding protein	NA	NA	NA	NA	NA
SQG21243.1|1785783_1786809_+	ferrichrome ABC transporter, permease protein	NA	A0A2H4IY97	uncultured_Caudovirales_phage	26.2	5.3e-15
SQG21245.1|1786808_1787804_+	iron compound ABC transporter permease	NA	NA	NA	NA	NA
SQG21247.1|1787938_1788586_+	Mn-dependent transcriptional regulator MntR	NA	NA	NA	NA	NA
SQG21249.1|1788660_1789317_-	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG21251.1|1789353_1789851_-	phosphatidylethanolamine-binding protein	NA	NA	NA	NA	NA
SQG21253.1|1789899_1790235_-	Protein of uncharacterised function (DUF2568)	NA	NA	NA	NA	NA
SQG21255.1|1790241_1790823_-	transcriptional regulator	NA	NA	NA	NA	NA
SQG21257.1|1790812_1791550_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
SQG21258.1|1791767_1792949_+|transposase	transposase IS663-like	transposase	Q9MBP7	Staphylococcus_prophage	38.1	1.3e-68
SQG21260.1|1792949_1793294_+|transposase	transposase IS663-like	transposase	Q9MBP7	Staphylococcus_prophage	33.3	3.5e-11
SQG21262.1|1793365_1793866_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG21263.1|1794116_1795052_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
SQG21265.1|1795132_1795774_-	membrane protein	NA	NA	NA	NA	NA
1796002:1796019	attL	ACTACGGCGAAAATATCA	NA	NA	NA	NA
SQG21267.1|1796226_1798398_-	surface antigen	NA	NA	NA	NA	NA
SQG21269.1|1798563_1799139_-	lipoprotein	NA	NA	NA	NA	NA
SQG21271.1|1799341_1800694_-|tRNA	TrmA family tRNA methyltransferase	tRNA	A0A2K5B251	Erysipelothrix_phage	34.5	1.3e-74
SQG21272.1|1800959_1801736_+	recombination regulator RecX	NA	NA	NA	NA	NA
SQG21274.1|1801841_1802375_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG21277.1|1814014_1814563_-	putative sigma-54 modulation protein	NA	NA	NA	NA	NA
SQG21278.1|1814638_1815307_-	late competence protein	NA	NA	NA	NA	NA
SQG21280.1|1815306_1816605_-	late competence protein	NA	A0A1X9I5S6	Streptococcus_phage	51.9	5.0e-127
SQG21282.1|1816651_1817290_+	Xaa-Pro dipeptidase	NA	A0A1X9I5T8	Streptococcus_phage	63.1	2.9e-67
SQG21284.1|1817389_1818319_+	cysteine synthase	NA	A0A1X9I5F1	Streptococcus_phage	78.8	5.3e-139
SQG21285.1|1818537_1818888_-	general stress protein GSP13	NA	NA	NA	NA	NA
SQG21287.1|1818887_1820285_-	peptidyl-prolyl cis-trans isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	41.3	1.7e-24
SQG21288.1|1820388_1821030_-	DNA-binding response regulator	NA	NA	NA	NA	NA
SQG21290.1|1821016_1822060_-	putative histidine kinase	NA	NA	NA	NA	NA
SQG21291.1|1822056_1822755_-	membrane protein	NA	NA	NA	NA	NA
SQG21293.1|1823232_1825107_-	Serine/threonine protein kinase PrkC, regulator of stationary phase	NA	A0A1B1IUU3	uncultured_Mediterranean_phage	35.8	1.3e-22
SQG21294.1|1825103_1825847_-	phosphoprotein phosphatase	NA	NA	NA	NA	NA
SQG21296.1|1825996_1827322_-	ribosomal RNA small subunit methyltransferase B	NA	NA	NA	NA	NA
SQG21298.1|1827305_1828241_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	38.1	6.2e-10
SQG21300.1|1828542_1830927_-	primosome assembly protein PriA	NA	NA	NA	NA	NA
SQG21301.1|1831712_1832030_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
SQG21303.1|1832052_1832667_-	guanylate kinase	NA	NA	NA	NA	NA
SQG21304.1|1832879_1833824_+	magnesium/cobalt transport protein	NA	NA	NA	NA	NA
SQG21306.1|1833853_1834543_+	putative membrane spanning protein	NA	NA	NA	NA	NA
SQG21307.1|1834971_1835211_-	SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent	NA	NA	NA	NA	NA
SQG21309.1|1835268_1835751_-	ssDNA-binding protein	NA	A0A191KBQ2	Streptococcus_virus	73.9	7.4e-60
SQG21311.1|1835762_1836053_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
SQG21312.1|1836506_1836953_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG21314.1|1836949_1837177_-	membrane protein	NA	NA	NA	NA	NA
SQG21315.1|1837339_1837516_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG21317.1|1837975_1838152_-|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
SQG21319.1|1838171_1838357_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG21320.1|1838438_1838612_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG21322.1|1838633_1838819_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG21324.1|1839112_1839304_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG21326.1|1839587_1839830_-|bacteriocin	bacteriocin peptide precursor	bacteriocin	NA	NA	NA	NA
SQG21327.1|1840050_1841040_-|integrase	integrase core domain protein	integrase	A0A2K9V2S9	Faecalibacterium_phage	35.7	9.0e-36
1849681:1849698	attR	ACTACGGCGAAAATATCA	NA	NA	NA	NA
