The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483375	Streptococcus gordonii strain NCTC3165 genome assembly, chromosome: 1	2154796	192063	255284	2154796	transposase,protease	Streptococcus_phage(50.0%)	57	NA	NA
SQG03248.1|192063_192981_-|protease	protease	protease	NA	NA	NA	NA
SQG03249.1|193326_194205_+	ribosome-associated GTPase	NA	NA	NA	NA	NA
SQG03250.1|194222_194882_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
SQG03251.1|194874_195507_+	thiamine pyrophosphokinase	NA	NA	NA	NA	NA
SQG03252.1|195508_196765_+	competence-induced protein Ccs50	NA	NA	NA	NA	NA
SQG03253.1|196754_197696_+	cmp-binding-factor 1	NA	NA	NA	NA	NA
SQG03254.1|197761_198607_+	pur operon repressor	NA	NA	NA	NA	NA
SQG03255.1|198621_199161_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG03256.1|199405_199819_+	30S ribosomal protein S12	NA	NA	NA	NA	NA
SQG03257.1|199838_200309_+	30S ribosomal protein S7	NA	NA	NA	NA	NA
SQG03258.1|200727_202809_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.2	2.4e-62
SQG03259.1|203041_204052_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
SQG03260.1|204297_209046_+	glycosyl hydrolase family LPXTG cell wall surface protein	NA	NA	NA	NA	NA
SQG03261.1|209362_210562_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
SQG03262.1|210742_215476_+	streptococcal surface protein A	NA	NA	NA	NA	NA
SQG03263.1|215722_216373_+	putative peptidoglycan hydrolase and general stress protein	NA	NA	NA	NA	NA
SQG03264.1|216515_217046_+	membrane protein	NA	NA	NA	NA	NA
SQG03265.1|217334_217700_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
SQG03266.1|217729_219076_+	glutamate-ammonia ligase	NA	NA	NA	NA	NA
SQG03267.1|219129_219534_+	histone acetyltransferase HPA2	NA	NA	NA	NA	NA
SQG03268.1|219768_221103_+	proton-dependent manganese transporter group C beta 2	NA	NA	NA	NA	NA
SQG03269.1|221311_221602_+|transposase	transposase	transposase	A0A1X9I5T2	Streptococcus_phage	81.8	3.0e-24
SQG03270.1|221541_221817_+|transposase	IS1562 transposase	transposase	A0A1X9I5T2	Streptococcus_phage	69.2	1.9e-31
SQG03271.1|221978_222761_+|transposase	ISSag8, transposase	transposase	A0A1X9I5T2	Streptococcus_phage	76.2	1.2e-102
SQG03272.1|222788_224471_-	metallo-beta-lactamase superfamily protein 1	NA	NA	NA	NA	NA
SQG03273.1|224474_224705_-	Protein of uncharacterised function DUF1447	NA	NA	NA	NA	NA
SQG03274.1|224981_225668_+	glycoprotein endopeptidase	NA	NA	NA	NA	NA
SQG03275.1|225664_226117_+	ribosomal-protein-alanine N-acetyltransferase	NA	NA	NA	NA	NA
SQG03276.1|226106_227117_+|protease	glycoprotease family protein	protease	NA	NA	NA	NA
SQG03277.1|227126_227822_+	transport protein-like protein	NA	NA	NA	NA	NA
SQG03278.1|227811_228144_+	integral membrane protein	NA	NA	NA	NA	NA
SQG03279.1|228252_228999_+	methyltransferase	NA	NA	NA	NA	NA
SQG03280.1|229329_229572_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG03281.1|229660_229969_+	putative lipoprotein	NA	NA	NA	NA	NA
SQG03282.1|230068_230809_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
SQG03283.1|230864_232040_-	flavoprotein	NA	A0A2H4PQX1	Staphylococcus_phage	61.3	1.5e-16
SQG03284.1|232306_232801_+	DNA-binding protein	NA	NA	NA	NA	NA
SQG03285.1|232856_234617_+	glycerophosphoryl diester phosphodiesterase family protein	NA	I6XE30	Staphylococcus_phage	24.8	1.1e-07
SQG03286.1|234658_234958_-	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG03287.1|235149_235557_+	putative lipoprotein	NA	NA	NA	NA	NA
SQG03288.1|235589_237869_-	x-prolyl-dipeptidyl aminopeptidase	NA	NA	NA	NA	NA
SQG03289.1|237972_238824_+	glycerol uptake facilitator protein-like protein	NA	M1HQB9	Paramecium_bursaria_Chlorella_virus	25.2	2.3e-16
SQG03290.1|238962_240243_+	membrane protein	NA	NA	NA	NA	NA
SQG03291.1|240370_241108_+	proteinase	NA	NA	NA	NA	NA
SQG03292.1|241104_242040_+	beta-lactamase-like protein	NA	NA	NA	NA	NA
SQG03293.1|242169_243048_+	mevalonate kinase	NA	NA	NA	NA	NA
SQG03294.1|243029_243977_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
SQG03295.1|243966_244986_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
SQG03296.1|244969_245974_+	isopentenyl pyrophosphate isomerase	NA	NA	NA	NA	NA
SQG03297.1|246019_247285_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA	NA
SQG03298.1|247281_248460_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
SQG03299.1|248647_248989_-	membrane protein	NA	NA	NA	NA	NA
SQG03300.1|249107_249866_-	membrane spanning protein	NA	NA	NA	NA	NA
SQG03301.1|250003_252319_-	pyruvate formate-lyase	NA	A0A2P0VNR5	Tetraselmis_virus	33.3	5.4e-116
SQG03302.1|252568_253633_+	DNA polymerase IV	NA	NA	NA	NA	NA
SQG03303.1|253844_254171_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG03304.1|254489_255284_+|protease	CAAX amino protease	protease	NA	NA	NA	NA
>prophage 2
LS483375	Streptococcus gordonii strain NCTC3165 genome assembly, chromosome: 1	2154796	643061	654694	2154796	tRNA	Streptococcus_phage(42.86%)	11	NA	NA
SQG03666.1|643061_645713_+|tRNA	valyl-tRNA synthetase	tRNA	A0A1V0S951	Catovirus	41.1	1.2e-151
SQG03667.1|645713_647210_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG03668.1|647271_648492_+	cytosine-specific methyltransferase	NA	V5URQ5	Oenococcus_phage	58.7	3.2e-131
SQG03669.1|648562_650146_+	Uncharacterised protein	NA	V5US45	Oenococcus_phage	31.3	7.0e-22
SQG03670.1|650217_650511_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG03671.1|650488_650863_-	YolD-like protein	NA	A0A1B0RXA8	Streptococcus_phage	36.6	1.1e-13
SQG03672.1|650859_652275_-	ImpB/MucB/SamB family protein	NA	M1Q231	Streptococcus_phage	63.6	2.5e-172
SQG03673.1|652279_652957_-	putative transcriptional repressor	NA	Q6DMX1	Streptococcus_phage	46.5	7.3e-53
SQG03674.1|653099_653588_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG03675.1|653670_654210_+	methyltransferase	NA	NA	NA	NA	NA
SQG03676.1|654199_654694_+	phosphopantetheine adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	34.0	1.0e-16
>prophage 3
LS483375	Streptococcus gordonii strain NCTC3165 genome assembly, chromosome: 1	2154796	1510581	1519994	2154796	tRNA	Streptococcus_phage(88.89%)	11	NA	NA
SQG04514.1|1510581_1512582_-|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SEZ7	Hokovirus	31.8	3.0e-86
SQG04515.1|1513109_1513937_+	exodeoxyribonuclease	NA	M1PSC0	Streptococcus_phage	81.0	1.9e-127
SQG04516.1|1513948_1514335_+	glyoxalase	NA	NA	NA	NA	NA
SQG04517.1|1514515_1515145_-	endonuclease III	NA	NA	NA	NA	NA
SQG04518.1|1515239_1515593_-	ArsC family transcription regulator	NA	M1PLC0	Streptococcus_phage	57.3	3.0e-34
SQG04519.1|1515602_1516085_-	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	64.6	1.7e-56
SQG04520.1|1516147_1517002_-	tetrapyrrole methylase family protein	NA	M1PLC5	Streptococcus_phage	65.8	1.0e-99
SQG04521.1|1517004_1517328_-	DNA replication intiation control protein YabA	NA	M1PFV3	Streptococcus_phage	71.0	1.5e-32
SQG04522.1|1517342_1518242_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	54.8	2.6e-82
SQG04523.1|1518238_1518877_-	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	65.6	1.3e-75
SQG04524.1|1519130_1519994_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	61.0	2.0e-95
>prophage 4
LS483375	Streptococcus gordonii strain NCTC3165 genome assembly, chromosome: 1	2154796	1724503	1732522	2154796		Streptococcus_phage(66.67%)	11	NA	NA
SQG04707.1|1724503_1724884_-	Uncharacterised protein	NA	A0A1W6JNL0	Staphylococcus_phage	28.8	2.4e-05
SQG04708.1|1725112_1725472_+	lipoprotein	NA	NA	NA	NA	NA
SQG04709.1|1725485_1725785_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG04710.1|1725823_1727041_-	endonuclease	NA	NA	NA	NA	NA
SQG04711.1|1727049_1727514_-	putative phage transcriptional regulator	NA	NA	NA	NA	NA
SQG04712.1|1727782_1729330_+	cytosine-specific methyltransferase	NA	A0A191SAU1	Nostoc_phage	34.0	1.4e-27
SQG04713.1|1729402_1729735_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG04714.1|1729786_1730068_-	Uncharacterised protein	NA	M1PG86	Streptococcus_phage	58.7	1.8e-18
SQG04715.1|1730060_1730423_-	Uncharacterised protein	NA	A0A1B0RXA8	Streptococcus_phage	50.8	6.2e-27
SQG04716.1|1730419_1731835_-	SOS responce UmuC protein	NA	M1Q231	Streptococcus_phage	74.1	9.8e-201
SQG04717.1|1731838_1732522_-	transcriptional regulator	NA	A0A1S5SAF1	Streptococcus_phage	49.0	7.6e-58
>prophage 5
LS483375	Streptococcus gordonii strain NCTC3165 genome assembly, chromosome: 1	2154796	1824579	1882905	2154796	integrase,tRNA,protease	Bacillus_virus(18.18%)	55	1834116:1834134	1846617:1846635
SQG04798.1|1824579_1825197_-|protease	CAAX amino protease	protease	NA	NA	NA	NA
SQG04799.1|1825393_1826191_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG04800.1|1826283_1826727_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
SQG04801.1|1826794_1829011_-	GTP diphosphokinase	NA	A0A2I2L310	Orpheovirus	35.8	8.6e-10
SQG04802.1|1829153_1829897_-	16S ribosomal RNA methyltransferase RsmE	NA	NA	NA	NA	NA
SQG04803.1|1829897_1830854_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
SQG04804.1|1830993_1831461_-	acetyltransferase	NA	NA	NA	NA	NA
SQG04805.1|1831457_1831910_-	7,8-dihydro-8-oxoguanine-triphosphatase	NA	NA	NA	NA	NA
SQG04806.1|1831919_1832390_-	Protein of uncharacterised function (DUF3013)	NA	NA	NA	NA	NA
SQG04807.1|1832477_1833746_+	recombination factor protein RarA	NA	A0A127AWE7	Bacillus_phage	45.9	3.7e-98
1834116:1834134	attL	AAGGCTTTTTTGCTTGTCT	NA	NA	NA	NA
SQG04808.1|1834170_1835310_-|integrase	integrase/recombinase, phage associated protein	integrase	Q9AZR0	Lactococcus_phage	30.9	3.1e-40
SQG04809.1|1835311_1835500_-	Domain of uncharacterised function (DUF3173)	NA	NA	NA	NA	NA
SQG04810.1|1835511_1836489_-	replication initiator protein	NA	NA	NA	NA	NA
SQG04811.1|1836924_1837434_+	transcriptional regulator, xre family protein	NA	X2KUB8	Streptococcus_phage	32.4	9.4e-05
SQG04812.1|1837749_1838760_+	membrane protein	NA	NA	NA	NA	NA
SQG04813.1|1838858_1838948_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG04814.1|1839241_1839460_-|integrase	integrase/recombinase, phage associated protein	integrase	NA	NA	NA	NA
SQG04815.1|1839770_1840916_+	putative low temperature requirement protein A	NA	NA	NA	NA	NA
SQG04816.1|1841071_1842553_-	Mga-like regulatory protein	NA	NA	NA	NA	NA
SQG04817.1|1842840_1843080_+	integral membrane protein	NA	NA	NA	NA	NA
SQG04818.1|1843135_1843717_+	membrane protein	NA	NA	NA	NA	NA
SQG04819.1|1843728_1843899_+	putative lipoprotein	NA	NA	NA	NA	NA
SQG04820.1|1843916_1844507_+	alkaline shock stress response protein	NA	NA	NA	NA	NA
SQG04821.1|1844590_1844794_+	CsbD-like protein	NA	NA	NA	NA	NA
SQG04822.1|1845056_1846121_-	membrane protein	NA	NA	NA	NA	NA
SQG04823.1|1847313_1847508_+	transcriptional regulator	NA	I3VYZ1	Thermoanaerobacterium_phage	42.1	4.7e-05
1846617:1846635	attR	AAGGCTTTTTTGCTTGTCT	NA	NA	NA	NA
SQG04824.1|1847523_1848066_+	membrane protein	NA	NA	NA	NA	NA
SQG04825.1|1848652_1848883_-	integral membrane protein	NA	NA	NA	NA	NA
SQG04826.1|1848886_1849135_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG04827.1|1849136_1850378_-	aminopeptidase PepS	NA	NA	NA	NA	NA
SQG04828.1|1850605_1853455_-	CbxX/CfqX family protein	NA	G3MAX6	Bacillus_virus	38.5	8.9e-44
SQG04829.1|1853630_1853780_-	DNA polymerase III PolC	NA	NA	NA	NA	NA
SQG04830.1|1853825_1855688_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQG04831.1|1855681_1857025_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQG04832.1|1857068_1857191_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG04833.1|1857277_1858225_-	putative transcriptional regulator	NA	NA	NA	NA	NA
SQG04834.1|1858262_1860161_-	putative RuBisCo-expression protein CbbX	NA	G3MAX6	Bacillus_virus	36.2	2.0e-39
SQG04835.1|1860249_1864638_-	DNA polymerase III PolC	NA	A0A0K2SUJ2	Clostridium_phage	39.7	4.3e-21
SQG04836.1|1864804_1865350_+	putative lipoprotein	NA	NA	NA	NA	NA
SQG04837.1|1865462_1865930_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG04838.1|1866034_1866415_-	superfamily I DNA/RNA helicase	NA	NA	NA	NA	NA
SQG04839.1|1866505_1868356_-|tRNA	prolyl-tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	24.7	1.6e-06
SQG04840.1|1868431_1869694_-|protease	membrane-associated zinc metalloprotease	protease	NA	NA	NA	NA
SQG04841.1|1869844_1870648_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
SQG04842.1|1870656_1871406_-	undecaprenyl pyrophosphate synthase	NA	R9W0U9	Flavobacterium_phage	38.8	4.0e-20
SQG04843.1|1871664_1871997_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
SQG04844.1|1872169_1874284_-|protease	ATP-dependent protease, ATP-binding subunit	protease	K4FB40	Cronobacter_phage	39.4	2.2e-119
SQG04845.1|1874536_1876528_-	PTS system IIABC component	NA	NA	NA	NA	NA
SQG04846.1|1876708_1878181_+	beta-fructofuranosidase/sucrose 6 phoshate hydrolase	NA	NA	NA	NA	NA
SQG04847.1|1878161_1879127_+	sucrose regulon regulatory protein	NA	NA	NA	NA	NA
SQG04848.1|1879199_1880057_-	5'-nucleotidase	NA	NA	NA	NA	NA
SQG04849.1|1880274_1880700_-	transcription antitermination protein NusB	NA	NA	NA	NA	NA
SQG04850.1|1880692_1881082_-	alkaline shock protein	NA	NA	NA	NA	NA
SQG04851.1|1881101_1881662_-	elongation factor P	NA	NA	NA	NA	NA
SQG04852.1|1881801_1882905_-|protease	band 7 domain superfamily protein; membrane protease	protease	NA	NA	NA	NA
>prophage 6
LS483375	Streptococcus gordonii strain NCTC3165 genome assembly, chromosome: 1	2154796	2106070	2121299	2154796		Streptococcus_phage(53.85%)	18	NA	NA
SQG05071.1|2106070_2108224_-	ATP-binding transport protein ComA	NA	W8CYL7	Bacillus_phage	29.5	1.0e-44
SQG05072.1|2108925_2109135_-	phage protein	NA	A0A141E1X9	Streptococcus_phage	76.6	4.5e-22
SQG05073.1|2109569_2109821_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG05074.1|2109996_2110500_-	phage protein	NA	A0A1X9I5V2	Streptococcus_phage	52.1	1.9e-45
SQG05075.1|2110572_2111097_-	phage protein	NA	A0A1X9I5U4	Streptococcus_phage	49.7	5.4e-40
SQG05076.1|2111461_2112901_-	phage replication protein	NA	Q9AZI5	Lactococcus_phage	37.5	1.1e-63
SQG05077.1|2112980_2113841_-	phage protein	NA	A0A1X9I6L2	Streptococcus_phage	71.0	5.1e-120
SQG05078.1|2114039_2114258_-	phage protein	NA	A0A1X9I5U9	Streptococcus_phage	64.6	2.1e-17
SQG05079.1|2114250_2114592_-	phage protein	NA	NA	NA	NA	NA
SQG05080.1|2114588_2114804_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG05081.1|2114805_2115009_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG05082.1|2115290_2115917_-	phage protein	NA	A0A192Y918	Salmonella_phage	42.0	1.2e-14
SQG05083.1|2115931_2116129_-	transcriptional regulator, XRE family	NA	A0A1X9I5U5	Streptococcus_phage	75.4	5.8e-19
SQG05084.1|2116292_2117066_+	Cro/CI family transcriptional regulator	NA	A0A2H4JBP6	uncultured_Caudovirales_phage	46.7	9.0e-07
SQG05085.1|2117109_2118099_+	Protein of uncharacterised function (DUF3644)	NA	A0A0N9RUA4	Staphylococcus_phage	46.5	3.1e-76
SQG05086.1|2118444_2119611_+	Integrase/recombinase, phage associated	NA	A0A1X9I5Y5	Streptococcus_phage	71.4	3.3e-162
SQG05087.1|2119699_2120311_-	30S ribosomal protein S4	NA	NA	NA	NA	NA
SQG05088.1|2120576_2121299_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.0	6.8e-33
