assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900475565.1_42912_A01	LS483394	Streptococcus pyogenes strain NCTC10880 genome assembly, chromosome: 1	4	772730-773095	2,4,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	cas3,DinG,csm6,cas9,cas1,cas2,csn2,DEDDh,csa3	Type II-C,Type II-B,Type II-A	GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC,GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC,GTTTTAGAGCTATGNTGTTTTGAATGGTCCCAAAAC	36,36,36	1	1	773030-773059	LS483394.1_1132680-1132651	II-A,II-B:II-A,II-B:II-A	4,5,5	5	TypeII-C,TypeII-B,TypeII-A	cas3,DinG,csm6,cas9,cas1,cas2,csn2,DEDDh,csa3	NA|214aa|up_8|LS483394.1_762190_762832_+,NA	NA|452aa|up_9|LS483394.1_760711_762067_+	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|214aa|up_8|LS483394.1_762190_762832_+	NA	NA|399aa|up_7|LS483394.1_762828_764025_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|251aa|up_6|LS483394.1_764034_764787_+	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|255aa|up_5|LS483394.1_764786_765551_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|211aa|up_4|LS483394.1_765550_766183_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	cas9|1369aa|up_3|LS483394.1_766661_770768_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|290aa|up_2|LS483394.1_770767_771637_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|104aa|up_1|LS483394.1_771663_771975_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|221aa|up_0|LS483394.1_771964_772627_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|611aa|down_0|LS483394.1_773739_775572_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|443aa|down_1|LS483394.1_775759_777088_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|146aa|down_2|LS483394.1_777273_777711_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|340aa|down_3|LS483394.1_777840_778860_+	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|142aa|down_4|LS483394.1_779066_779492_+	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|164aa|down_5|LS483394.1_779518_780010_+	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]	NA|270aa|down_6|LS483394.1_780026_780836_+	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]	NA|276aa|down_7|LS483394.1_780832_781660_+	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism]	NA|550aa|down_8|LS483394.1_781795_783445_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|263aa|down_9|LS483394.1_783448_784237_+	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]
