The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483410	Legionella pneumophila strain NCTC11404 genome assembly, chromosome: 1	3396440	932336	939175	3396440		Acinetobacter_phage(42.86%)	9	NA	NA
SQG84962.1|932336_933113_-	indole-3-glycerol phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	48.2	2.5e-57
SQG84963.1|933105_934140_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	47.6	1.2e-75
SQG84964.1|934117_934696_-	anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	53.2	1.3e-55
SQG84965.1|934729_935455_-	ABC-type transport system protein involved in lipoprotein release, ATPase compnent	NA	G9BWD6	Planktothrix_phage	28.3	3.1e-17
SQG84966.1|935451_935961_-	lipopolysaccharide export system protein LptA	NA	NA	NA	NA	NA
SQG84967.1|935941_936511_-	Uncharacterized protein YrbK clustered with lipopolysaccharide transporters	NA	NA	NA	NA	NA
SQG84968.1|936507_937035_-	hydrolase	NA	A0A140XBD6	Dickeya_phage	47.7	1.4e-27
SQG84969.1|937048_938011_-	polysialic acid capsule expression protein	NA	A0A2P0VNK5	Tetraselmis_virus	34.1	4.2e-38
SQG84970.1|938377_939175_+	putative ABC transport system ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.8	1.3e-21
>prophage 2
LS483410	Legionella pneumophila strain NCTC11404 genome assembly, chromosome: 1	3396440	1312671	1318608	3396440		Staphylococcus_phage(50.0%)	6	NA	NA
SQG85316.1|1312671_1313745_+	riboflavin biosynthesis protein	NA	A0A2H4PQS8	Staphylococcus_phage	28.6	3.6e-30
SQG85317.1|1313729_1314344_+	riboflavin synthase subunit alpha	NA	A0A2I2L4R9	Orpheovirus	38.4	1.3e-21
SQG85318.1|1314340_1315549_+	Riboflavin biosynthesis protein	NA	A0A2H4PQS2	Staphylococcus_phage	48.5	4.5e-98
SQG85319.1|1315556_1316024_+	riboflavin synthase subunit beta	NA	A0A2H4PQS3	Staphylococcus_phage	49.1	9.2e-23
SQG85320.1|1316149_1317787_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.5	2.7e-154
SQG85321.1|1317783_1318608_+	2-dehydro-3-deoxyphosphooctonate aldolase	NA	E3T537	Cafeteria_roenbergensis_virus	43.9	1.8e-53
>prophage 3
LS483410	Legionella pneumophila strain NCTC11404 genome assembly, chromosome: 1	3396440	2096351	2127366	3396440	integrase,tRNA,protease,transposase	unidentified_phage(28.57%)	26	2111733:2111750	2133425:2133442
SQG86003.1|2096351_2097845_-|tRNA	glutamate tRNA synthetase catalytic subunit	tRNA	NA	NA	NA	NA
SQG86004.1|2097865_2098708_+	sensory box histidine kinase/response regulator	NA	NA	NA	NA	NA
SQG86005.1|2098745_2100566_+	sensory box histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	32.6	1.4e-50
SQG86006.1|2100662_2101907_+	6-phosphofructokinase	NA	NA	NA	NA	NA
SQG86007.1|2101903_2102317_-	fimbrial protein, type IV pilin, PilE	NA	NA	NA	NA	NA
SQG86008.1|2102509_2102920_-	type IV pilus assembly protein PilA	NA	NA	NA	NA	NA
SQG86009.1|2103222_2103540_+	putative regulator of murein genes BolA	NA	NA	NA	NA	NA
SQG86010.1|2103614_2105036_+	Glutamate/gamma-aminobutyrate antiporter	NA	NA	NA	NA	NA
SQG86011.1|2105133_2106564_-	Dot/Icm secretion system substrate	NA	A0A248SL44	Klebsiella_phage	31.0	7.0e-05
SQG86012.1|2106811_2107564_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
SQG86013.1|2107560_2107740_-	tetraacyldisaccharide-1-P-4'-kinase	NA	NA	NA	NA	NA
SQG86014.1|2107732_2108404_-|protease	glycoprotease (O-sialoglycoprotein endopeptidase)	protease	NA	NA	NA	NA
SQG86015.1|2108381_2110340_-	ATP dependent DNA helicase (DEAD box family) Rad3	NA	A0A127AW80	Bacillus_phage	31.5	7.7e-87
SQG86016.1|2110327_2110663_-	ferredoxin II (4Fe-4S)	NA	NA	NA	NA	NA
SQG86017.1|2110945_2113735_+	protein kinase domain containing protein	NA	NA	NA	NA	NA
2111733:2111750	attL	ATAATCTGGAAGAAATTG	NA	NA	NA	NA
SQG86018.1|2114037_2116683_+	coiled-coil protein	NA	NA	NA	NA	NA
SQG86019.1|2116758_2117316_+	type IV pilus assembly PilZ	NA	NA	NA	NA	NA
SQG86020.1|2117391_2117661_+	protein that protects iron-sulfur proteins against oxidative damage	NA	NA	NA	NA	NA
SQG86021.1|2117672_2118599_+	indigoidine synthase A-like protein involved in pigment biosynthesis	NA	NA	NA	NA	NA
SQG86022.1|2118765_2119008_-|transposase	IS30B/C/D transposase	transposase	H7BVY4	unidentified_phage	37.1	7.4e-08
SQG86023.1|2119044_2120220_-|transposase	transposase (IS652)	transposase	A9YX10	Burkholderia_phage	23.2	2.7e-15
SQG86024.1|2120258_2121035_-|integrase	integrase catalytic subunit	integrase	H7BUM7	unidentified_phage	28.4	2.3e-18
SQG86025.1|2121178_2121904_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86026.1|2122336_2124703_+	Ankyrin repeat protein	NA	NA	NA	NA	NA
SQG86027.1|2124925_2125960_+|transposase	transposase, ISSod13	transposase	A0A077SLK2	Escherichia_phage	76.8	1.6e-155
SQG86028.1|2126256_2127366_-|transposase	Putative transposase	transposase	NA	NA	NA	NA
2133425:2133442	attR	CAATTTCTTCCAGATTAT	NA	NA	NA	NA
>prophage 4
LS483410	Legionella pneumophila strain NCTC11404 genome assembly, chromosome: 1	3396440	2240443	2250571	3396440	protease	Bacillus_phage(16.67%)	7	NA	NA
SQG86130.1|2240443_2242132_-|protease	AprE, Subtilisin-like serine protease	protease	A0A1B0T6A2	Bacillus_phage	30.4	6.1e-16
SQG86131.1|2242263_2243271_-	transcriptional regulator OruR, AraC family	NA	NA	NA	NA	NA
SQG86132.1|2243394_2244720_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	31.2	1.8e-47
SQG86133.1|2244738_2245887_-	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	58.7	1.2e-127
SQG86134.1|2246100_2247213_-	carbamoyl phosphate synthase, small subunit	NA	R4TGJ8	Halovirus	35.2	3.8e-51
SQG86135.1|2247308_2248448_-	heat shock protein DnaJ, chaperone protein	NA	A0A1V0SBY2	Catovirus	26.9	1.6e-23
SQG86136.1|2248636_2250571_-	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	49.6	1.3e-147
>prophage 5
LS483410	Legionella pneumophila strain NCTC11404 genome assembly, chromosome: 1	3396440	2280932	2332531	3396440	integrase,transposase	Streptococcus_phage(25.0%)	57	2280843:2280889	2326330:2326376
2280843:2280889	attL	GGCTTCGAACCAAGGTGTCGGGGGTTCGAGTCCCTCCGAGCGCGCCA	NA	NA	NA	NA
SQG86166.1|2280932_2282093_-|integrase	integrase	integrase	A0A059VF45	Pseudomonas_phage	45.8	1.5e-85
SQG86167.1|2282427_2283432_-	protein of uncharacterised function DUF1016	NA	Q9JMP5	Wolbachia_phage	32.9	8.0e-48
SQG86168.1|2283452_2283935_-	putative Acyl-CoA N-acyltransferase	NA	NA	NA	NA	NA
SQG86169.1|2283951_2285226_-	proline betaine transport protein like protein	NA	NA	NA	NA	NA
SQG86170.1|2285203_2285716_-	N-acetyltransferase ats1	NA	NA	NA	NA	NA
SQG86171.1|2285757_2286441_+	lipolytic protein	NA	NA	NA	NA	NA
SQG86172.1|2286467_2287271_+	lipolytic enzyme / transcription regulator protein	NA	NA	NA	NA	NA
SQG86173.1|2287354_2287594_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86174.1|2287719_2287917_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86175.1|2287945_2288341_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQG86176.1|2288355_2290263_-	cadmium efflux ATPase	NA	E4ZFI9	Streptococcus_phage	45.5	6.6e-144
SQG86177.1|2290832_2291003_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86178.1|2291267_2293403_-	cadmium translocating P-type ATPase CadA	NA	E4ZFI9	Streptococcus_phage	42.0	1.0e-145
SQG86179.1|2293479_2296629_-	cobalt/zinc/cadmium efflux RND transporter, permease HelA	NA	NA	NA	NA	NA
SQG86180.1|2296638_2297895_-	cation efflux system HelB	NA	NA	NA	NA	NA
SQG86181.1|2297891_2299136_-	cobalt/zinc/cadmium efflux RND transporter, outer membrane protein	NA	NA	NA	NA	NA
SQG86182.1|2299399_2300062_-	phage repressor	NA	NA	NA	NA	NA
SQG86183.1|2300246_2301119_+	lvrA	NA	NA	NA	NA	NA
SQG86184.1|2301063_2301447_+	virB	NA	NA	NA	NA	NA
SQG86185.1|2301466_2301664_+	vir region protein	NA	NA	NA	NA	NA
SQG86186.1|2301660_2302095_+	integrating conjugative element protein PilL, PFGI-1 class	NA	NA	NA	NA	NA
SQG86187.1|2302091_2302706_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86188.1|2302698_2303535_+	bile acid beta-glucosidase	NA	NA	NA	NA	NA
SQG86189.1|2303536_2303995_+	integrating conjugative element protein, PFL_4695 family	NA	NA	NA	NA	NA
SQG86190.1|2303985_2304684_+	Fe2+/Zn2+ uptake regulation protein	NA	NA	NA	NA	NA
SQG86191.1|2304693_2305017_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86192.1|2305019_2305283_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86193.1|2305285_2305672_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86194.1|2305680_2306031_+	conjugative transfer region protein	NA	NA	NA	NA	NA
SQG86195.1|2306035_2306698_+	integrating conjugative element protein, PFL_4703 family	NA	NA	NA	NA	NA
SQG86196.1|2306684_2307467_+	integrating conjugative element protein, PFL_4704 family	NA	NA	NA	NA	NA
SQG86197.1|2307463_2308777_+	membrane protein	NA	NA	NA	NA	NA
SQG86198.1|2308733_2309123_+	putative lipoprotein	NA	NA	NA	NA	NA
SQG86199.1|2309133_2311908_+	Type IV secretory protein VirB4 components	NA	NA	NA	NA	NA
SQG86200.1|2311882_2312878_+	integrating conjugative element protein, PFL_4710 family	NA	NA	NA	NA	NA
SQG86201.1|2312887_2314270_+	Tfp pilus assembly, pilus retraction ATPase PilT	NA	NA	NA	NA	NA
SQG86202.1|2314271_2315840_+	membrane protein	NA	NA	NA	NA	NA
SQG86203.1|2315842_2316052_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86204.1|2316065_2316398_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86205.1|2316401_2318408_+	conjugative coupling factor TraD	NA	NA	NA	NA	NA
SQG86206.1|2318409_2318895_+	Domain of uncharacterised function (DUF1845)	NA	NA	NA	NA	NA
SQG86207.1|2318979_2319189_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86208.1|2319335_2320304_-	Protein of uncharacterised function (DUF3644)	NA	NA	NA	NA	NA
SQG86209.1|2320962_2321766_+|integrase	putative integrase	integrase	NA	NA	NA	NA
SQG86210.1|2321758_2322658_+|integrase	putative integrase	integrase	NA	NA	NA	NA
SQG86211.1|2323068_2323254_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86212.1|2323316_2323823_+	antirestriction protein	NA	U5P3Z5	Mycobacterium_phage	39.5	4.2e-21
SQG86213.1|2323924_2324542_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86214.1|2324574_2325066_-	4-diphosphocytidyl-2-methyl-D-erythritol synthase	NA	NA	NA	NA	NA
SQG86215.1|2325076_2325895_-	dam methylase	NA	A0A1S6L1V5	Vibrio_phage	47.1	1.4e-63
SQG86216.1|2326480_2327656_-|transposase	transposase (IS652)	transposase	A9YX10	Burkholderia_phage	23.2	2.7e-15
2326330:2326376	attR	GGCTTCGAACCAAGGTGTCGGGGGTTCGAGTCCCTCCGAGCGCGCCA	NA	NA	NA	NA
SQG86217.1|2327694_2328825_-|transposase	transposase (IS652)	transposase	A0A2D1GQC1	Lysinibacillus_phage	18.5	1.3e-06
SQG86218.1|2328979_2329558_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86219.1|2329662_2330229_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG86220.1|2330576_2330831_+	Putative addiction module antidote protein, CC2985 family (containing the CopG/Arc/MetJ DNA-binding domain)	NA	NA	NA	NA	NA
SQG86221.1|2330820_2331117_+	putative toxin antitoxin plasmid stabilization system ParE	NA	NA	NA	NA	NA
SQG86222.1|2331577_2332531_-|transposase	transposase (ISmav2)	transposase	NA	NA	NA	NA
