The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483419	Salmonella enterica subsp. enterica serovar Thompson strain NCTC5740 genome assembly, chromosome: 1	4707477	1674947	1684118	4707477	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
SQH05240.1|1674947_1675895_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	2.8e-10
SQH05241.1|1675878_1676610_+	putative permease transmembrane component	NA	NA	NA	NA	NA
SQH05242.1|1676590_1676698_-	membrane protein	NA	NA	NA	NA	NA
SQH05243.1|1676757_1677489_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
SQH05244.1|1677711_1679397_+	putative sensor kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
SQH05245.1|1679393_1680113_+	two-component system response regulator	NA	NA	NA	NA	NA
SQH05246.1|1680159_1680627_+	Protein of uncharacterised function (DUF1456)	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
SQH05247.1|1680683_1681214_-	lipoprotein	NA	NA	NA	NA	NA
SQH05248.1|1681385_1681844_-	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	71.9	2.4e-52
SQH05249.1|1682084_1684118_-|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
>prophage 2
LS483419	Salmonella enterica subsp. enterica serovar Thompson strain NCTC5740 genome assembly, chromosome: 1	4707477	1968467	1974864	4707477	integrase	Pectobacterium_phage(16.67%)	10	1962910:1962924	1973809:1973823
1962910:1962924	attL	AATGACGTGTGAACG	NA	NA	NA	NA
SQH05522.1|1968467_1968698_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	60.3	2.9e-14
SQH05523.1|1968835_1969210_+	Copper resistance protein CopC	NA	NA	NA	NA	NA
SQH05524.1|1969210_1970086_+	membrane protein	NA	NA	NA	NA	NA
SQH05525.1|1970102_1970456_+	Protein of uncharacterised function (DUF2511)	NA	NA	NA	NA	NA
SQH05526.1|1970838_1971918_-|integrase	phage integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	52.2	1.3e-99
SQH05527.1|1971914_1973021_-	exodeoxyribonuclease 8	NA	Q9QF34	Lambdoid_phage	65.0	1.4e-53
SQH05528.1|1973051_1973282_+	lytic enzyme	NA	Q8HA86	Salmonella_phage	93.7	6.1e-28
SQH05529.1|1973335_1973869_+	exported phage protein	NA	A0A291LBG9	Klebsiella_phage	43.0	5.4e-11
1973809:1973823	attR	AATGACGTGTGAACG	NA	NA	NA	NA
SQH05530.1|1974125_1974293_-	lytic enzyme	NA	NA	NA	NA	NA
SQH05531.1|1974600_1974864_+	DNA breaking-rejoining protein	NA	Q9EYD0	Enterobacteria_phage	59.8	2.0e-19
>prophage 3
LS483419	Salmonella enterica subsp. enterica serovar Thompson strain NCTC5740 genome assembly, chromosome: 1	4707477	2777740	2841116	4707477	tail,protease,holin,terminase	Salmonella_phage(55.56%)	73	NA	NA
SQH06308.1|2777740_2779501_+|protease	protease	protease	NA	NA	NA	NA
SQH06309.1|2779569_2780088_+	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase	NA	NA	NA	NA	NA
SQH06310.1|2780610_2781174_-	lipoprotein	NA	NA	NA	NA	NA
SQH06311.1|2781170_2782811_-	paraquat-inducible protein B	NA	NA	NA	NA	NA
SQH06312.1|2782815_2784069_-	paraquat-inducible protein A	NA	NA	NA	NA	NA
SQH06313.1|2784083_2785991_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
SQH06314.1|2786003_2788112_-	23S rRNA (guanine-N-2-) -methyl transferase rlmL	NA	NA	NA	NA	NA
SQH06315.1|2788210_2789320_+	Flavodoxin reductases (ferredoxin-NADPHreductases) family 1	NA	NA	NA	NA	NA
SQH06316.1|2789316_2789859_-	Z-ring-associated protein C	NA	NA	NA	NA	NA
SQH06317.1|2790024_2791035_-	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
SQH06318.1|2791242_2793855_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.8	3.7e-20
SQH06319.1|2794218_2794488_+	Gifsy-2 prophage MsgA	NA	S4TNM0	Salmonella_phage	98.9	3.9e-42
SQH06320.1|2795482_2795764_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH06321.1|2796411_2797182_+	polar amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SQH06322.1|2797279_2797435_+|tail	tail fiber assembly protein	tail	E5G6P4	Salmonella_phage	75.0	2.2e-05
SQH06323.1|2798540_2799992_-|tail	side tail fiber protein	tail	E5G6P0	Salmonella_phage	70.7	8.6e-43
SQH06324.1|2799981_2800584_-	Protein of uncharacterised function (DUF2612)	NA	A0A2R3UAM9	Myoviridae_environmental_samples	38.9	4.3e-33
SQH06325.1|2800585_2801827_-	bacteriophage protein	NA	A0A077KGW9	Edwardsiella_phage	49.9	9.1e-102
SQH06326.1|2801823_2802180_-	Uncharacterised protein	NA	A0A077KCA1	Edwardsiella_phage	49.1	1.6e-19
SQH06327.1|2802192_2802870_-	bacteriophage protein	NA	A0A077KAY0	Edwardsiella_phage	35.5	2.7e-31
SQH06328.1|2802850_2803720_-	Uncharacterised protein	NA	A0A077KC17	Edwardsiella_phage	32.7	9.1e-32
SQH06329.1|2803716_2804019_-	Uncharacterised protein	NA	A0A077K9U4	Edwardsiella_phage	49.5	1.2e-23
SQH06330.1|2804018_2804729_-	Uncharacterised protein	NA	A0A077KGW3	Edwardsiella_phage	34.6	5.0e-28
SQH06331.1|2804725_2806897_-	lytic transglycosylase	NA	A0A0M4REK7	Salmonella_phage	70.2	4.1e-49
SQH06332.1|2807104_2807509_-	Uncharacterised protein	NA	H9C0W7	Aeromonas_phage	44.8	2.4e-19
SQH06333.1|2807508_2807955_-	Uncharacterised protein	NA	Q2NPD1	Xanthomonas_phage	40.4	4.8e-21
SQH06334.1|2807955_2809440_-	Protein of uncharacterised function (DUF3383)	NA	A0A077KGV4	Edwardsiella_phage	41.0	2.3e-96
SQH06335.1|2809420_2809966_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH06336.1|2809950_2810316_-	Uncharacterised protein	NA	A0A077KAW7	Edwardsiella_phage	40.5	1.8e-21
SQH06337.1|2810312_2810897_-	Mu-like prophage protein gpG	NA	H9C0W2	Aeromonas_phage	30.6	5.5e-17
SQH06338.1|2810890_2811346_-	Uncharacterised protein	NA	H9C0W0	Aeromonas_phage	46.0	9.6e-17
SQH06339.1|2811352_2811700_-	Uncharacterised protein	NA	H9C0V9	Aeromonas_phage	40.2	1.3e-10
SQH06340.1|2811703_2812732_-	Uncharacterised protein	NA	A0A219YBB0	Aeromonas_phage	48.7	2.3e-82
SQH06341.1|2812731_2813214_-	Uncharacterised protein	NA	A0A1X9SFC3	Acinetobacter_phage	48.8	6.4e-27
SQH06342.1|2813215_2814562_-	Uncharacterized protein conserved in bacteria	NA	A0A219YCD3	Aeromonas_phage	36.3	4.6e-67
SQH06343.1|2814558_2815248_-	putative bacteriophage protein	NA	H9C0V1	Aeromonas_phage	48.7	2.2e-57
SQH06344.1|2815288_2816809_-	Phage-associated protein	NA	A0A2R3UAL5	Myoviridae_environmental_samples	43.9	2.8e-105
SQH06345.1|2816808_2818428_-	gp33 TerL	NA	A0A0M5M1R6	Salmonella_phage	83.5	6.2e-268
SQH06346.1|2818430_2819060_-|terminase	putative prophage terminase small subunit	terminase	A0A0M3ULJ9	Salmonella_phage	85.2	6.9e-90
SQH06347.1|2819163_2819370_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH06348.1|2819477_2819660_-	Protein of uncharacterised function (DUF826)	NA	NA	NA	NA	NA
SQH06349.1|2819879_2820347_-	putative endopeptidase	NA	A0A0M4RD57	Salmonella_phage	92.9	4.8e-72
SQH06350.1|2820343_2820796_-	Lysozyme	NA	A0A0M4R365	Salmonella_phage	98.7	4.6e-80
SQH06351.1|2820779_2821115_-|holin	bacteriophage holin	holin	A0A0M3ULK9	Salmonella_phage	100.0	4.1e-57
SQH06352.1|2821597_2821747_+	GogA	NA	Q9MBM0	Phage_Gifsy-2	100.0	4.6e-21
SQH06353.1|2822077_2822215_-|holin	holin	holin	NA	NA	NA	NA
SQH06354.1|2822431_2822881_+	Gifsy-2 prophage protein	NA	NA	NA	NA	NA
SQH06355.1|2823016_2823142_-	Gifsy-2 prophage protein	NA	NA	NA	NA	NA
SQH06356.1|2823540_2824338_-	molecular chaperone	NA	A0A0M4S661	Salmonella_phage	99.6	4.0e-151
SQH06357.1|2824470_2825082_-	bacteriophage Lambda NinG protein	NA	A0A0M4RU10	Salmonella_phage	99.0	9.3e-92
SQH06358.1|2825084_2825291_-	Phage protein	NA	S4TNP0	Salmonella_phage	100.0	3.5e-35
SQH06359.1|2825290_2825893_-	bacteriophage protein	NA	S4TTI0	Salmonella_phage	99.0	2.2e-109
SQH06360.1|2826292_2826526_-	DNA damage-inducible protein I	NA	A0A0M4REN2	Salmonella_phage	97.4	1.5e-34
SQH06361.1|2826840_2827869_+	P63C domain	NA	A0A0M4S6X1	Salmonella_phage	100.0	1.6e-192
SQH06362.1|2828238_2828529_-	Uncharacterised protein	NA	A0A0M5M1K8	Salmonella_phage	98.9	2.2e-43
SQH06363.1|2828566_2828770_-	DNA polymerase III, theta subunit, putative	NA	A0A0M3ULK6	Salmonella_phage	100.0	9.8e-30
SQH06364.1|2829174_2829612_-	phage protein	NA	A0A0M4R357	Salmonella_phage	97.9	3.0e-76
SQH06365.1|2829608_2830058_-	Uncharacterised protein	NA	A0A0M4S653	Salmonella_phage	99.3	9.3e-81
SQH06366.1|2830054_2830756_-	replication protein P	NA	A0A0M3ULE2	Salmonella_phage	99.6	8.4e-129
SQH06367.1|2830752_2831658_-	phage replication protein O	NA	A0A0M5M7Y1	Salmonella_phage	99.0	1.3e-174
SQH06368.1|2831749_2832070_-	repressor	NA	A0A0M4RU01	Salmonella_phage	100.0	1.3e-52
SQH06369.1|2832083_2832326_-	phage regulatory protein	NA	A0A0M4QX15	Salmonella_phage	71.8	2.1e-26
SQH06370.1|2832430_2832826_+	putative prophage protein HTH	NA	K7PM35	Enterobacteria_phage	71.8	5.9e-47
SQH06371.1|2833081_2833585_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH06372.1|2833613_2833838_-	bacteriophage protein	NA	K7P7I0	Enterobacteria_phage	69.1	6.1e-17
SQH06373.1|2834121_2834238_+	Gifsy-1 prophage protein	NA	NA	NA	NA	NA
SQH06374.1|2834230_2834389_+	DNA breaking-rejoining protein	NA	H6WRX3	Salmonella_phage	100.0	2.4e-23
SQH06375.1|2834473_2834761_+	Gifsy-1 prophage protein	NA	H6WRX2	Salmonella_phage	97.9	1.1e-47
SQH06376.1|2834887_2838088_+	exodeoxyribonuclease VIII	NA	S4TNL0	Salmonella_phage	78.7	0.0e+00
SQH06377.1|2838098_2839208_+	Gifsy-2 prophage RecT	NA	H6WRX0	Salmonella_phage	100.0	7.1e-207
SQH06378.1|2839250_2839490_+	putative bacteriophage protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
SQH06379.1|2839530_2839779_+	excisionase	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
SQH06380.1|2839823_2841116_+	Integrase	NA	S4TSP2	Salmonella_phage	100.0	3.4e-253
>prophage 4
LS483419	Salmonella enterica subsp. enterica serovar Thompson strain NCTC5740 genome assembly, chromosome: 1	4707477	3316390	3375821	4707477	protease,transposase,tRNA	Bacillus_phage(25.0%)	52	NA	NA
SQH06808.1|3316390_3317308_+|protease	Putative stomatin/prohibitin-family membraneprotease subunit YbbK	protease	NA	NA	NA	NA
SQH06809.1|3317304_3317757_+|protease	Putative activity regulator of membraneprotease YbbK	protease	NA	NA	NA	NA
SQH06810.1|3317757_3318174_-	copper efflux regulator	NA	NA	NA	NA	NA
SQH06811.1|3318283_3320785_+	Lead cadmium zinc and mercury transporting ATPase	NA	A0A218MNH6	uncultured_virus	37.2	3.9e-112
SQH06812.1|3320938_3321766_+	Secreted protein	NA	NA	NA	NA	NA
SQH06813.1|3322847_3323327_+|tRNA	Cys-tRNA(Pro) deacylase YbaK	tRNA	NA	NA	NA	NA
SQH06814.1|3323442_3325095_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA	NA
SQH06815.1|3325267_3326488_+	fosmidomycin resistance protein	NA	NA	NA	NA	NA
SQH06816.1|3326499_3326625_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH06817.1|3326702_3328379_+	transport protein	NA	NA	NA	NA	NA
SQH06818.1|3328427_3329777_-	inosine/guanosine kinase	NA	NA	NA	NA	NA
SQH06819.1|3329884_3330856_+	acetyl esterase	NA	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	27.4	8.6e-15
SQH06820.1|3330852_3331815_-	ferrochelatase	NA	NA	NA	NA	NA
SQH06821.1|3332043_3332688_-	adenylate kinase	NA	NA	NA	NA	NA
SQH06822.1|3333103_3334978_-	chaperone protein HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	36.9	1.7e-115
SQH06823.1|3335088_3335694_-	recombination protein RecR	NA	NA	NA	NA	NA
SQH06824.1|3335693_3336023_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA	NA
SQH06825.1|3338110_3338662_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.2	1.0e-28
SQH06826.1|3338814_3339192_-	Inner membrane protein YbaN	NA	NA	NA	NA	NA
SQH06827.1|3339272_3339788_+	Primosomal replication protein N prime prime	NA	NA	NA	NA	NA
SQH06828.1|3339801_3339969_+	Putative inner membrane protein	NA	NA	NA	NA	NA
SQH06829.1|3340038_3340494_+	Transposase_31	NA	Q2A0A7	Sodalis_phage	54.9	5.2e-39
SQH06830.1|3340768_3341098_+|transposase	Putative transposase	transposase	NA	NA	NA	NA
SQH06831.1|3341139_3344502_-	integral membrane protein AefA	NA	NA	NA	NA	NA
SQH06832.1|3344620_3345274_-	potential acrAB operon repressor	NA	NA	NA	NA	NA
SQH06833.1|3345415_3346609_+	acriflavin resistance protein A	NA	NA	NA	NA	NA
SQH06834.1|3346631_3349781_+	acriflavin resistance protein B	NA	NA	NA	NA	NA
SQH06835.1|3350276_3350651_+	Hha toxicity attenuator	NA	NA	NA	NA	NA
SQH06836.1|3350678_3350897_+	hemolysin expression modulating protein	NA	NA	NA	NA	NA
SQH06837.1|3351075_3351627_+	maltose O-acetyltransferase	NA	NA	NA	NA	NA
SQH06838.1|3351744_3352215_+	Putative inner membrane protein	NA	NA	NA	NA	NA
SQH06839.1|3352416_3352677_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
SQH06840.1|3352901_3354452_+	Uncharacterized protein ylaB	NA	NA	NA	NA	NA
SQH06841.1|3354760_3355072_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	NA	NA	NA	NA
SQH06842.1|3355104_3355674_-	lipoprotein	NA	NA	NA	NA	NA
SQH06843.1|3355888_3356749_+	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
SQH06844.1|3356848_3358135_-	ammonium transporter	NA	NA	NA	NA	NA
SQH06845.1|3358166_3358505_-	nitrogen regulatory protein P-II	NA	NA	NA	NA	NA
SQH06846.1|3358717_3360499_-	Multidrug resistance-like ATP-binding protein mdlB	NA	W8CYL7	Bacillus_phage	26.7	3.2e-39
SQH06847.1|3360491_3362264_-	ABC transporter ATP-binding membrane protein	NA	W8CYL7	Bacillus_phage	29.8	4.7e-51
SQH06848.1|3362304_3362763_-	transcriptional regulator	NA	NA	NA	NA	NA
SQH06849.1|3362875_3363931_+	lyase	NA	NA	NA	NA	NA
SQH06850.1|3363980_3364799_-	HMP-PP phosphatase	NA	NA	NA	NA	NA
SQH06851.1|3364899_3366600_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SQH06852.1|3366664_3367360_+	queuosine biosynthesis protein QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	68.4	1.2e-87
SQH06853.1|3367465_3367864_-	4-hydroxybenzoyl-CoA thio esterase family activesite	NA	NA	NA	NA	NA
SQH06854.1|3367967_3368342_-	competence protein ComEA	NA	NA	NA	NA	NA
SQH06855.1|3368491_3370363_-	peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA	NA
SQH06856.1|3370653_3370926_-	DNA-binding protein HU-beta	NA	A7KV42	Bacillus_phage	58.4	1.9e-20
SQH06857.1|3371134_3373489_-|protease	Lon protease	protease	A0A0R6PGP8	Moraxella_phage	52.5	1.6e-224
SQH06858.1|3373674_3374946_-|protease	ATP-dependent clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.5	5.6e-131
SQH06859.1|3375197_3375821_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	63.9	2.9e-64
>prophage 5
LS483419	Salmonella enterica subsp. enterica serovar Thompson strain NCTC5740 genome assembly, chromosome: 1	4707477	4143741	4196153	4707477	tRNA,transposase,protease	Vibrio_phage(20.0%)	49	NA	NA
SQH07549.1|4143741_4144473_-|tRNA	putative tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
SQH07550.1|4144563_4147002_-	ribonuclease R (RNase R)	NA	Q0GXV6	Lactococcus_phage	33.1	9.9e-68
SQH07551.1|4147039_4147465_-	transcriptional regulator	NA	NA	NA	NA	NA
SQH07552.1|4147672_4148971_-	adenylosuccinate synthetase	NA	W5S5V7	Pithovirus	35.6	4.9e-66
SQH07553.1|4149073_4149271_-	membrane protein	NA	NA	NA	NA	NA
SQH07554.1|4149349_4150354_-|protease	FtsH protease regulator HflC	protease	NA	NA	NA	NA
SQH07555.1|4150356_4151616_-|protease	protease	protease	NA	NA	NA	NA
SQH07556.1|4151830_4153111_-|protease	GTP-binding subunit of protease	protease	NA	NA	NA	NA
SQH07557.1|4153182_4153491_-	host factor-I protein(HF-I)	NA	NA	NA	NA	NA
SQH07558.1|4153573_4154524_-|tRNA	tRNA delta-2-isopentenylpyrophosphate (IPP) transferase	tRNA	NA	NA	NA	NA
SQH07559.1|4154516_4156373_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	41.8	5.8e-60
SQH07560.1|4156382_4157702_-	N-acetylmuramoyl-l-alanine amidase II	NA	A0A067ZJB6	Vibrio_phage	29.2	1.8e-15
SQH07561.1|4157718_4158180_-	ATPase YjeE predicted to have essential rolein cell wall biosynthesis	NA	NA	NA	NA	NA
SQH07562.1|4158151_4159696_-	carbohydrate kinase	NA	NA	NA	NA	NA
SQH07563.1|4159697_4160837_+	Fe-S protein	NA	NA	NA	NA	NA
SQH07564.1|4161921_4162662_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SQH07565.1|4162723_4163269_-	Oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	41.6	4.5e-29
SQH07566.1|4163375_4164428_+	ribosome-associated GTPase	NA	NA	NA	NA	NA
SQH07567.1|4164519_4165488_+	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA	NA
SQH07568.1|4165506_4168833_+	Potassium efflux system KefA protein	NA	NA	NA	NA	NA
SQH07569.1|4168899_4169214_-	inner membrane protein YjeO	NA	NA	NA	NA	NA
SQH07570.1|4169265_4170768_-	amino acid permease	NA	NA	NA	NA	NA
SQH07571.1|4170993_4171971_-|tRNA	lysyl-tRNA synthetase	tRNA	A0A2K9KZX5	Tupanvirus	29.1	1.7e-26
SQH07572.1|4172293_4174084_+	fumarate reductase flavoprotein subunit	NA	NA	NA	NA	NA
SQH07573.1|4174076_4174811_+	fumarate reductase, iron-sulfur protein	NA	NA	NA	NA	NA
SQH07574.1|4174821_4175217_+	fumarate reductase complex subunit C; membrane anchor polypeptide	NA	NA	NA	NA	NA
SQH07575.1|4175227_4175587_+	fumarate reductase complex subunit D; membrane anchor polypeptide	NA	NA	NA	NA	NA
SQH07576.1|4175698_4176232_+	lipoprotein	NA	A0A1W6JNX6	Morganella_phage	54.8	9.4e-48
SQH07577.1|4176248_4176566_-	SugE protein	NA	NA	NA	NA	NA
SQH07578.1|4176822_4177410_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
SQH07579.1|4177694_4177868_-	entericidin A	NA	NA	NA	NA	NA
SQH07580.1|4177889_4178456_-	Elongation factor P EF-P	NA	NA	NA	NA	NA
SQH07581.1|4178496_4179525_+	Lysyl-lysine 23-aminomutase	NA	NA	NA	NA	NA
SQH07582.1|4179806_4180664_+	inner membrane protein	NA	NA	NA	NA	NA
SQH07583.1|4180711_4181065_-	membrane protein	NA	NA	NA	NA	NA
SQH07584.1|4181308_4182955_-	GroEL protein	NA	A0A2I7SAK5	Vibrio_phage	68.7	1.2e-189
SQH07585.1|4182998_4183292_-	GroES protein	NA	K4F9I2	Cronobacter_phage	43.3	1.2e-12
SQH07586.1|4183546_4184809_+	transporter	NA	NA	NA	NA	NA
SQH07587.1|4184867_4185383_-	FxsA protein	NA	NA	NA	NA	NA
SQH07588.1|4185684_4187121_+	aspartate ammonia-lyase	NA	NA	NA	NA	NA
SQH07589.1|4187235_4188537_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
SQH07590.1|4188657_4189005_+	Divalent cation tolerance protein	NA	NA	NA	NA	NA
SQH07591.1|4188980_4190684_+	thiol:disulfide interchange protein DsbD	NA	NA	NA	NA	NA
SQH07592.1|4190720_4191296_+	transcriptional regulator	NA	NA	NA	NA	NA
SQH07593.1|4192197_4192950_+	acid phosphatase	NA	NA	NA	NA	NA
SQH07594.1|4193092_4193626_+|transposase	transposase IS1113	transposase	NA	NA	NA	NA
SQH07595.1|4193687_4193978_+|transposase	putative transposase for insertion sequence element ISRM3-like protein	transposase	A0A218MNI5	uncultured_virus	71.4	4.4e-07
SQH07596.1|4194226_4195228_-	putative periplasmic protein	NA	NA	NA	NA	NA
SQH07597.1|4195946_4196153_-|transposase	transposase insF	transposase	NA	NA	NA	NA
>prophage 6
LS483419	Salmonella enterica subsp. enterica serovar Thompson strain NCTC5740 genome assembly, chromosome: 1	4707477	4293140	4340213	4707477	tail,plate,tRNA	Burkholderia_phage(38.1%)	47	NA	NA
SQH07667.1|4293140_4294139_-|tRNA	tRNA dihydrouridine synthase A	tRNA	NA	NA	NA	NA
SQH07668.1|4294226_4295537_-	conjugative transfer protein	NA	NA	NA	NA	NA
SQH07669.1|4295783_4296299_+	zinc uptake regulation protein	NA	NA	NA	NA	NA
SQH07670.1|4296398_4296611_-	stress-response protein	NA	NA	NA	NA	NA
SQH07671.1|4296629_4296758_-	putative cytoplasmic protein	NA	NA	NA	NA	NA
SQH07672.1|4296739_4298065_-	DNA-damage-inducible membrane protein	NA	NA	NA	NA	NA
SQH07673.1|4298243_4298852_-	LexA repressor	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
SQH07674.1|4298960_4299329_-	diacylglycerol kinase	NA	NA	NA	NA	NA
SQH07675.1|4299499_4301920_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
SQH07676.1|4302018_4302891_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
SQH07677.1|4302904_4303402_-	chorismate lyase	NA	NA	NA	NA	NA
SQH07678.1|4303583_4304501_-	maltose operon periplasmic protein	NA	NA	NA	NA	NA
SQH07679.1|4304664_4306023_-	maltoporin	NA	NA	NA	NA	NA
SQH07680.1|4306111_4307221_-	maltose/maltodextrin transport ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	47.2	6.2e-17
SQH07681.1|4307582_4308773_+	maltose ABC transporter periplasmic protein	NA	NA	NA	NA	NA
SQH07682.1|4308904_4310449_+	maltose transport inner membrane protein	NA	NA	NA	NA	NA
SQH07683.1|4310463_4311354_+	maltose transport inner membrane protein	NA	NA	NA	NA	NA
SQH07684.1|4311519_4311930_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
SQH07685.1|4312072_4314169_-	lipoprotein	NA	NA	NA	NA	NA
SQH07686.1|4314168_4314906_-	putative lipoprotein	NA	NA	NA	NA	NA
SQH07687.1|4314902_4315541_-	outer membrane lipoprotein	NA	NA	NA	NA	NA
SQH07688.1|4315604_4315850_-	YjbE secreted protein	NA	NA	NA	NA	NA
SQH07689.1|4316290_4317940_-	Glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
SQH07690.1|4318284_4319634_+	lysine-sensitive aspartokinase III	NA	NA	NA	NA	NA
SQH07691.1|4319764_4320112_-	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
SQH07692.1|4320688_4320976_+	membrane protein	NA	Q6QIC8	Burkholderia_phage	48.1	3.0e-16
SQH07693.1|4321011_4321584_+	lytic murein transglycosylase	NA	Q5ZQZ1	Pseudomonas_phage	59.9	5.2e-60
SQH07694.1|4321596_4321911_+	membrane protein	NA	Q6QIC4	Burkholderia_phage	48.2	1.1e-19
SQH07695.1|4322071_4322527_+	putative cytoplasmic protein	NA	NA	NA	NA	NA
SQH07696.1|4322523_4322721_+	gp12	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
SQH07697.1|4322710_4324138_+|tail	tail protein	tail	A4JWK5	Burkholderia_virus	70.9	1.1e-194
SQH07698.1|4324137_4324662_+|tail	tail protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
SQH07699.1|4324713_4325031_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH07700.1|4325215_4327570_+|tail	tail protein	tail	A4JWL0	Burkholderia_virus	30.9	4.0e-66
SQH07701.1|4327569_4328523_+	methyl-accepting chemotaxis protein	NA	A4JWL1	Burkholderia_virus	50.8	2.3e-36
SQH07702.1|4328522_4328732_+	membrane protein	NA	A4JWL2	Burkholderia_virus	58.8	2.8e-16
SQH07703.1|4328719_4329763_+	gp21	NA	A4JWL3	Burkholderia_virus	45.9	6.5e-77
SQH07704.1|4329772_4330495_+|plate	baseplate protein	plate	A0A067ZIM2	Vibrio_phage	42.0	3.9e-12
SQH07705.1|4331181_4332111_+	bactoprenol glucosyl transferase	NA	S5FKN0	Shigella_phage	84.1	7.9e-151
SQH07706.1|4332110_4333658_+	membrane protein	NA	B9UDL6	Salmonella_phage	29.9	1.9e-48
SQH07707.1|4333821_4334181_+|plate	baseplate protein	plate	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
SQH07708.1|4334171_4335287_+|plate	baseplate protein	plate	Q6QI99	Burkholderia_phage	52.2	3.1e-101
SQH07709.1|4335279_4335912_+|tail	tail fiber protein	tail	Q6QI98	Burkholderia_phage	56.4	1.1e-23
SQH07710.1|4335914_4337684_+|tail	tail protein	tail	A0A0M3ULH6	Salmonella_phage	40.5	3.2e-52
SQH07711.1|4337688_4338294_+	putative cytoplasmic protein	NA	NA	NA	NA	NA
SQH07712.1|4338290_4338746_+	cytoplasmic protein	NA	NA	NA	NA	NA
SQH07713.1|4339484_4340213_+	cytoplasmic protein	NA	A0A077SLK3	Escherichia_phage	37.3	7.3e-35
