assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900475985.1_47297_C01	LS483437	Streptococcus pyogenes strain NCTC13751 genome assembly, chromosome: 1	2	1035393-1035494	2	CRISPRCasFinder	no		cas3,DinG,csm6,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,csa3	Orphan	AATAATTGGTATAGTCTAATTATA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csm6,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,csa3	NA,NA|262aa|down_6|LS483437.1_1043324_1044110_+	NA|83aa|up_9|LS483437.1_1023109_1023358_-	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|773aa|up_8|LS483437.1_1023720_1026039_-	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|441aa|up_7|LS483437.1_1026567_1027890_+	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism]	NA|412aa|up_6|LS483437.1_1028009_1029245_+	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|258aa|up_5|LS483437.1_1029614_1030388_-	pfam07373, CAMP_factor, CAMP factor (Cfa)	NA|279aa|up_4|LS483437.1_1030757_1031594_-	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily	NA|210aa|up_3|LS483437.1_1031609_1032239_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|214aa|up_2|LS483437.1_1032248_1032890_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|112aa|up_1|LS483437.1_1032996_1033332_-	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]	NA|605aa|up_0|LS483437.1_1033527_1035342_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|186aa|down_0|LS483437.1_1035517_1036075_-	TIGR02227, Inactive_signal_peptidase_IA	NA|501aa|down_1|LS483437.1_1036292_1037795_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|338aa|down_2|LS483437.1_1037857_1038871_-	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|1037aa|down_3|LS483437.1_1038950_1042061_-	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed	NA|124aa|down_4|LS483437.1_1042245_1042617_+	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|233aa|down_5|LS483437.1_1042616_1043315_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|262aa|down_6|LS483437.1_1043324_1044110_+	NA	NA|205aa|down_7|LS483437.1_1044240_1044855_-	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|207aa|down_8|LS483437.1_1045595_1046216_+	pfam12978, DUF3862, Domain of Unknown Function with PDB structure (DUF3862)	NA|755aa|down_9|LS483437.1_1046472_1048737_-	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins
GCA_900475985.1_47297_C01	LS483437	Streptococcus pyogenes strain NCTC13751 genome assembly, chromosome: 1	3	1328135-1328363	3,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	cas3,DinG,csm6,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,csa3	 Type I-U?,Type I-C,Type I-U	ATTTCAATCCACTCACCCATGAAGGGTGAGAC,ATTTCAATCCACTCACCCATGAAGGGTGAGAC,TTTCAATCCACTCACCCATGAAGGGTGAGAC	32,32,31	0	0	NA	NA	I-C:I-C:I-C	3,3,3	3	TypeI-U?,TypeI-C,TypeI-U	cas3,DinG,csm6,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,csa3	NA|50aa|up_9|LS483437.1_1320902_1321052_-,NA|64aa|up_7|LS483437.1_1321823_1322015_-,NA|174aa|up_4|LS483437.1_1323574_1324096_+,NA	NA|50aa|up_9|LS483437.1_1320902_1321052_-	NA	NA|243aa|up_8|LS483437.1_1321084_1321813_-	COG3561, COG3561, Phage anti-repressor protein [Transcription]	NA|64aa|up_7|LS483437.1_1321823_1322015_-	NA	NA|120aa|up_6|LS483437.1_1322810_1323170_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|127aa|up_5|LS483437.1_1323183_1323564_+	pfam06114, Peptidase_M78, IrrE N-terminal-like domain	NA|174aa|up_4|LS483437.1_1323574_1324096_+	NA	NA|366aa|up_3|LS483437.1_1324271_1325369_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|369aa|up_2|LS483437.1_1325479_1326586_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|208aa|up_1|LS483437.1_1326628_1327252_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|237aa|up_0|LS483437.1_1327264_1327975_-	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	cas2|98aa|down_0|LS483437.1_1328511_1328805_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|342aa|down_1|LS483437.1_1328815_1329841_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|225aa|down_2|LS483437.1_1329837_1330512_-	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense    mechanisms]	cas7|283aa|down_3|LS483437.1_1330513_1331362_-	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas8c|397aa|down_4|LS483437.1_1331366_1332557_-	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG	cas8c|147aa|down_5|LS483437.1_1332814_1333255_-	cd09642, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|243aa|down_6|LS483437.1_1333254_1333983_-	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas3|803aa|down_7|LS483437.1_1334115_1336524_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|883aa|down_8|LS483437.1_1336677_1339326_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|188aa|down_9|LS483437.1_1339327_1339891_-	pfam13238, AAA_18, AAA domain
