assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900477975.1_46983_G01	LS483459	Corynebacterium jeikeium strain NCTC11914 genome assembly, chromosome: 1	1	328940-329024	1	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DinG	Orphan	ACGCATTCCCGTTCTAACGACAT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DinG	NA|192aa|up_8|LS483459.1_319151_319727_+,NA|355aa|up_7|LS483459.1_319716_320781_+,NA|109aa|up_2|LS483459.1_325917_326244_-,NA|258aa|up_1|LS483459.1_326268_327042_+,NA|502aa|up_0|LS483459.1_327066_328572_+,NA|382aa|down_4|LS483459.1_333681_334827_-	NA|367aa|up_9|LS483459.1_317874_318975_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|192aa|up_8|LS483459.1_319151_319727_+	NA	NA|355aa|up_7|LS483459.1_319716_320781_+	NA	NA|267aa|up_6|LS483459.1_320929_321730_+	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|561aa|up_5|LS483459.1_321799_323482_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|253aa|up_4|LS483459.1_323579_324338_-	PRK07904, PRK07904, decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase	NA|471aa|up_3|LS483459.1_324373_325786_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|109aa|up_2|LS483459.1_325917_326244_-	NA	NA|258aa|up_1|LS483459.1_326268_327042_+	NA	NA|502aa|up_0|LS483459.1_327066_328572_+	NA	NA|225aa|down_0|LS483459.1_329114_329789_-	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|237aa|down_1|LS483459.1_329754_330465_-	pfam04138, GtrA, GtrA-like protein	NA|303aa|down_2|LS483459.1_330614_331523_-	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|611aa|down_3|LS483459.1_331526_333359_-	PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated	NA|382aa|down_4|LS483459.1_333681_334827_-	NA	NA|109aa|down_5|LS483459.1_335389_335716_-	pfam05534, HicB, HicB family	NA|263aa|down_6|LS483459.1_336681_337470_-	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|296aa|down_7|LS483459.1_337581_338469_-	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|456aa|down_8|LS483459.1_338816_340184_+	TIGR01976, am_tr_V_VC1184, cysteine desulfurase family protein, VC1184 subfamily	NA|258aa|down_9|LS483459.1_340319_341093_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter
GCA_900477975.1_46983_G01	LS483459	Corynebacterium jeikeium strain NCTC11914 genome assembly, chromosome: 1	2	336413-336561	2	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DinG	Orphan	TTCCCGTTCTAGCGACATTCTGGCC	25	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,DEDDh,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DinG	NA|109aa|up_8|LS483459.1_325917_326244_-,NA|258aa|up_7|LS483459.1_326268_327042_+,NA|502aa|up_6|LS483459.1_327066_328572_+,NA|382aa|up_1|LS483459.1_333681_334827_-,NA|1025aa|down_5|LS483459.1_342871_345946_+,NA|244aa|down_8|LS483459.1_347547_348279_-	NA|471aa|up_9|LS483459.1_324373_325786_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|109aa|up_8|LS483459.1_325917_326244_-	NA	NA|258aa|up_7|LS483459.1_326268_327042_+	NA	NA|502aa|up_6|LS483459.1_327066_328572_+	NA	NA|225aa|up_5|LS483459.1_329114_329789_-	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|237aa|up_4|LS483459.1_329754_330465_-	pfam04138, GtrA, GtrA-like protein	NA|303aa|up_3|LS483459.1_330614_331523_-	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|611aa|up_2|LS483459.1_331526_333359_-	PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated	NA|382aa|up_1|LS483459.1_333681_334827_-	NA	NA|109aa|up_0|LS483459.1_335389_335716_-	pfam05534, HicB, HicB family	NA|263aa|down_0|LS483459.1_336681_337470_-	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|296aa|down_1|LS483459.1_337581_338469_-	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|456aa|down_2|LS483459.1_338816_340184_+	TIGR01976, am_tr_V_VC1184, cysteine desulfurase family protein, VC1184 subfamily	NA|258aa|down_3|LS483459.1_340319_341093_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|334aa|down_4|LS483459.1_341164_342166_-	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase	NA|1025aa|down_5|LS483459.1_342871_345946_+	NA	NA|299aa|down_6|LS483459.1_345976_346873_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|100aa|down_7|LS483459.1_346869_347169_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|244aa|down_8|LS483459.1_347547_348279_-	NA	NA|263aa|down_9|LS483459.1_348275_349064_-	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter
GCA_900477975.1_46983_G01	LS483459	Corynebacterium jeikeium strain NCTC11914 genome assembly, chromosome: 1	3	676579-676682	3	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DinG	Orphan	GGTTTGTGGTGGGTTTGTGCGCTGAATGTCG	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DinG	NA,NA	NA|445aa|up_9|LS483459.1_668330_669665_+	PRK09204, secY, preprotein translocase subunit SecY; Reviewed	NA|182aa|up_8|LS483459.1_669661_670207_+	PRK00279, adk, adenylate kinase; Reviewed	NA|265aa|up_7|LS483459.1_670335_671130_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|398aa|up_6|LS483459.1_671330_672524_+	pfam00375, SDF, Sodium:dicarboxylate symporter family	NA|73aa|up_5|LS483459.1_672750_672969_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|123aa|up_4|LS483459.1_673216_673585_+	PRK05179, rpsM, 30S ribosomal protein S13; Validated	NA|135aa|up_3|LS483459.1_673588_673993_+	PRK05309, PRK05309, 30S ribosomal protein S11; Validated	NA|202aa|up_2|LS483459.1_674019_674625_+	PRK05327, rpsD, 30S ribosomal protein S4; Validated	NA|338aa|up_1|LS483459.1_674769_675783_+	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|188aa|up_0|LS483459.1_675838_676402_+	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|68aa|down_0|LS483459.1_676810_677014_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|104aa|down_1|LS483459.1_676959_677271_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|333aa|down_2|LS483459.1_677376_678375_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|421aa|down_3|LS483459.1_678224_679487_-	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	NA|433aa|down_4|LS483459.1_679624_680923_+	TIGR03919, putative_membrane_protein, type VII secretion protein EccB, Actinobacterial	NA|396aa|down_5|LS483459.1_680799_681987_-	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin	NA|384aa|down_6|LS483459.1_681986_683138_-	pfam08817, YukD, WXG100 protein secretion system (Wss), protein YukD	NA|1059aa|down_7|LS483459.1_683371_686548_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|449aa|down_8|LS483459.1_686584_687931_+	TIGR03931, T7SS_Rv3446c, type VII secretion-associated protein, Rv3446c family, C-terminal domain	NA|96aa|down_9|LS483459.1_688082_688370_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target
GCA_900477975.1_46983_G01	LS483459	Corynebacterium jeikeium strain NCTC11914 genome assembly, chromosome: 1	4	1901542-1904072	1,4,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1	csa3,cas3,DEDDh,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DinG	Type I-E	GTGCTCCCCGCGCCAGCGGGGATGAGCC,GTGCTCCCCGCGCCAGCGGGGATGAGCC,GTGCTCCCCGCGCCAGCGGGGATGAGCCG	28,28,29	0	0	NA	NA	I-E:I-E:I-E	41,41,41	41	TypeI-E	csa3,cas3,DEDDh,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DinG	NA,NA|97aa|down_0|LS483459.1_1904228_1904519_-,NA|85aa|down_1|LS483459.1_1904606_1904861_-,NA|67aa|down_2|LS483459.1_1905471_1905672_+,NA|105aa|down_8|LS483459.1_1911057_1911372_+	NA|299aa|up_9|LS483459.1_1889534_1890431_-	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|243aa|up_8|LS483459.1_1890450_1891179_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|240aa|up_7|LS483459.1_1891368_1892088_+	pfam00881, Nitroreductase, Nitroreductase family	cas3|912aa|up_6|LS483459.1_1892460_1895196_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|545aa|up_5|LS483459.1_1895322_1896957_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|212aa|up_4|LS483459.1_1897001_1897637_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|377aa|up_3|LS483459.1_1897665_1898796_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|236aa|up_2|LS483459.1_1898795_1899503_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|225aa|up_1|LS483459.1_1899499_1900174_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|314aa|up_0|LS483459.1_1900184_1901126_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	NA|97aa|down_0|LS483459.1_1904228_1904519_-	NA	NA|85aa|down_1|LS483459.1_1904606_1904861_-	NA	NA|67aa|down_2|LS483459.1_1905471_1905672_+	NA	NA|217aa|down_3|LS483459.1_1905953_1906604_+	pfam07553, Lipoprotein_Ltp, Host cell surface-exposed lipoprotein	NA|93aa|down_4|LS483459.1_1906635_1906914_-	pfam02583, Trns_repr_metal, Metal-sensitive transcriptional repressor	NA|715aa|down_5|LS483459.1_1906913_1909058_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|214aa|down_6|LS483459.1_1909083_1909725_-	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain	NA|367aa|down_7|LS483459.1_1909767_1910868_-	TIGR03451, S-hydroxymethylmycothiol_dehydrogenase, S-(hydroxymethyl)mycothiol dehydrogenase	NA|105aa|down_8|LS483459.1_1911057_1911372_+	NA	NA|303aa|down_9|LS483459.1_1911473_1912382_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed
GCA_900477975.1_46983_G01	LS483459	Corynebacterium jeikeium strain NCTC11914 genome assembly, chromosome: 1	5	2354931-2355048	5	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DinG	Orphan	ACGCATTCCCGTTCTAACGACATTTCAGCCCCAGC	35	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DinG	NA|471aa|up_2|LS483459.1_2349486_2350899_+,NA|70aa|down_7|LS483459.1_2363172_2363382_-	NA|194aa|up_9|LS483459.1_2342731_2343313_+	PRK12846, PRK12846, peptide deformylase; Reviewed	NA|363aa|up_8|LS483459.1_2343305_2344394_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|267aa|up_7|LS483459.1_2344405_2345206_+	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|504aa|up_6|LS483459.1_2345209_2346721_+	PRK01642, cls, cardiolipin synthetase; Reviewed	NA|181aa|up_5|LS483459.1_2346842_2347385_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|271aa|up_4|LS483459.1_2347479_2348292_-	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein	NA|373aa|up_3|LS483459.1_2348291_2349410_-	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|471aa|up_2|LS483459.1_2349486_2350899_+	NA	NA|362aa|up_1|LS483459.1_2350898_2351984_+	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|892aa|up_0|LS483459.1_2351973_2354649_+	pfam16918, PknG_TPR, Protein kinase G tetratricopeptide repeat	NA|404aa|down_0|LS483459.1_2355137_2356349_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|515aa|down_1|LS483459.1_2356491_2358036_-	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|338aa|down_2|LS483459.1_2358132_2359146_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|246aa|down_3|LS483459.1_2359216_2359954_-	cd03416, CbiX_SirB_N, Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain	NA|420aa|down_4|LS483459.1_2359955_2361215_-	COG2895, CysN, GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism]	NA|305aa|down_5|LS483459.1_2361214_2362129_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|267aa|down_6|LS483459.1_2362125_2362926_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|70aa|down_7|LS483459.1_2363172_2363382_-	NA	NA|565aa|down_8|LS483459.1_2363385_2365080_-	COG0155, CysI, Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]	NA|474aa|down_9|LS483459.1_2365395_2366817_+	PLN02852, PLN02852, ferredoxin-NADP+ reductase
GCA_900477975.1_46983_G01	LS483459	Corynebacterium jeikeium strain NCTC11914 genome assembly, chromosome: 1	6	2400337-2400432	6	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DinG	Orphan	ATTCCCGTTCTAACGACATTCTGC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DinG	NA|301aa|up_6|LS483459.1_2389860_2390763_+,NA|1310aa|up_5|LS483459.1_2390775_2394705_-,NA|153aa|down_7|LS483459.1_2409616_2410075_-	NA|541aa|up_9|LS483459.1_2384857_2386480_-	cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL)	NA|575aa|up_8|LS483459.1_2386635_2388360_+	pfam00755, Carn_acyltransf, Choline/Carnitine o-acyltransferase	NA|430aa|up_7|LS483459.1_2388390_2389680_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|301aa|up_6|LS483459.1_2389860_2390763_+	NA	NA|1310aa|up_5|LS483459.1_2390775_2394705_-	NA	NA|400aa|up_4|LS483459.1_2394818_2396018_-	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|300aa|up_3|LS483459.1_2396067_2396967_-	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family	NA|180aa|up_2|LS483459.1_2397029_2397569_-	pfam11349, DUF3151, Protein of unknown function (DUF3151)	NA|345aa|up_1|LS483459.1_2397583_2398618_-	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional	NA|452aa|up_0|LS483459.1_2398800_2400156_-	COG4833, COG4833, Predicted glycosyl hydrolase [Carbohydrate transport and metabolism]	NA|228aa|down_0|LS483459.1_2400546_2401230_-	cd18096, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU	NA|181aa|down_1|LS483459.1_2401239_2401782_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|595aa|down_2|LS483459.1_2401800_2403585_-	pfam04147, Nop14, Nop14-like family	NA|128aa|down_3|LS483459.1_2403596_2403980_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|390aa|down_4|LS483459.1_2404081_2405251_-	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT	NA|989aa|down_5|LS483459.1_2405299_2408266_-	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|305aa|down_6|LS483459.1_2408646_2409561_+	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|153aa|down_7|LS483459.1_2409616_2410075_-	NA	NA|206aa|down_8|LS483459.1_2410091_2410709_-	pfam00358, PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1	NA|296aa|down_9|LS483459.1_2410669_2411557_-	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
