The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483462	Streptococcus pasteurianus strain NCTC13784 genome assembly, chromosome: 1	2178089	111690	153220	2178089	portal,holin,tail,terminase,lysis,tRNA	Streptococcus_phage(78.26%)	64	NA	NA
SQI07623.1|111690_112008_+	thioredoxin	NA	A0A1V0SD63	Indivirus	32.8	6.9e-06
SQI07624.1|112016_112643_+|tRNA	putative tRNA binding domain-containing protein	tRNA	NA	NA	NA	NA
SQI07625.1|112737_112851_+	single-strand DNA-binding protein	NA	NA	NA	NA	NA
SQI07626.1|112858_114304_-	site-specific recombinase/resolvase	NA	K4JU73	Streptococcus_phage	60.4	2.7e-158
SQI07627.1|114465_114696_-	phage protein	NA	NA	NA	NA	NA
SQI07628.1|114700_115951_-	phage protein	NA	A0A1B0Y697	Lactobacillus_phage	49.8	1.9e-54
SQI07629.1|115954_116701_-	phage repressor protein	NA	A0A1S5S8S8	Streptococcus_phage	59.0	2.2e-71
SQI07630.1|116855_117071_+	phage repressor	NA	E8ZDN3	Streptococcus_phage	57.7	1.1e-15
SQI07631.1|117094_117439_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI07632.1|117598_117922_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI07633.1|118158_118305_+	Uncharacterised protein	NA	K4JU69	Streptococcus_phage	61.8	1.1e-06
SQI07634.1|118301_118478_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI07635.1|118470_118845_+	transcriptional regulator, Cro/CI family,putative	NA	A0A1X9I723	Streptococcus_phage	69.8	1.1e-15
SQI07636.1|118834_118936_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI07637.1|118936_119800_+	dnaD and phage-associated domain-containing protein	NA	J7KBV5	Streptococcus_phage	88.6	8.4e-54
SQI07638.1|119802_120042_+	Uncharacterised protein	NA	A0A141E200	Streptococcus_phage	39.7	9.8e-05
SQI07639.1|119995_120277_+	phage protein	NA	A0A1P8VVT9	Streptococcus_phage	37.7	5.2e-05
SQI07640.1|120276_120402_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI07641.1|120405_120585_+	phage protein	NA	A0A1S5SAF4	Streptococcus_phage	74.6	2.6e-18
SQI07642.1|120581_120749_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI07643.1|120782_121715_+	Recombinational DNA repair protein RecT (prophage associated)	NA	Q708Q2	Streptococcus_phage	79.4	5.2e-110
SQI07644.1|121707_122538_+	phage protein	NA	A0A1S5S8V6	Streptococcus_phage	73.4	1.3e-123
SQI07645.1|122542_122869_+	Uncharacterised protein	NA	M1PS51	Streptococcus_phage	54.7	6.2e-26
SQI07646.1|123086_123395_+	phage protein	NA	NA	NA	NA	NA
SQI07647.1|123420_124227_+	C-5 cytosine-specific DNA methylase	NA	U4KJA1	Streptococcus_phage	77.0	3.9e-114
SQI07648.1|124204_124942_+	prophage LambdaSa2, antirepressor protein, putative	NA	A0A1X9I5P1	Streptococcus_phage	55.6	4.4e-27
SQI07649.1|124952_125198_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI07650.1|125187_125349_+	Uncharacterised protein	NA	A0A1L2JXW7	Streptococcus_phage	66.0	8.0e-11
SQI07651.1|125341_125500_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI07652.1|125492_126053_+	phage protein	NA	A0A1X9I5P8	Streptococcus_phage	39.4	3.7e-26
SQI07653.1|126275_126695_+	YopX protein	NA	E8ZD49	Streptococcus_phage	51.4	4.8e-31
SQI07654.1|126691_127081_+	Uncharacterised protein	NA	U6E9D1	Streptococcus_phage	67.5	1.4e-40
SQI07655.1|127083_127494_+	phage Holliday junction resolvase	NA	A0A141DZK7	Streptococcus_phage	66.2	6.8e-46
SQI07656.1|127496_127733_+	Uncharacterised protein	NA	M1I9V1	Streptococcus_phage	52.9	1.4e-11
SQI07657.1|127837_128242_+	phage protein	NA	A0A060QS48	Streptococcus_phage	84.3	2.9e-57
SQI07658.1|128436_128868_+|terminase	Phage terminase, small subunit	terminase	A0A286QRS0	Streptococcus_phage	62.8	2.3e-36
SQI07659.1|128857_130087_+|terminase	Phage terminase, large subunit	terminase	A0A286QR50	Streptococcus_phage	79.3	1.1e-189
SQI07660.1|130086_131484_+|portal	portal protein	portal	A0A097PAT2	Streptococcus_pyogenes_phage	47.3	4.4e-105
SQI07661.1|131473_132904_+	phage protein	NA	A1EAE3	Streptococcus_phage	34.9	3.5e-73
SQI07662.1|133023_133179_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI07663.1|133181_133553_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI07664.1|133654_134245_+	phage scaffold protein	NA	NA	NA	NA	NA
SQI07665.1|134251_135094_+	MHP	NA	A0A141E1A1	Streptococcus_phage	79.3	1.1e-122
SQI07666.1|135093_135252_+	transcription termination factor	NA	NA	NA	NA	NA
SQI07667.1|135256_135574_+	phage protein	NA	A0A1W6JNR3	Staphylococcus_phage	47.9	7.4e-16
SQI07668.1|135570_135891_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI07669.1|135877_136231_+	phage protein	NA	Q76RP4	Streptococcus_phage	44.6	2.0e-17
SQI07670.1|136220_136610_+	phage protein	NA	W6LLG8	Streptococcus_phage	46.8	3.0e-27
SQI07671.1|136619_137105_+|tail	Phage tail protein	tail	A0A286QQX9	Streptococcus_phage	62.2	4.7e-46
SQI07672.1|137184_137532_+	phage protein	NA	A0A2H4J007	uncultured_Caudovirales_phage	52.2	5.8e-22
SQI07673.1|137579_137918_+	Uncharacterised protein	NA	A0A2H4J2Z7	uncultured_Caudovirales_phage	41.2	6.2e-13
SQI07674.1|137910_141810_+	phage protein	NA	A0A2H4J016	uncultured_Caudovirales_phage	45.3	7.4e-25
SQI07675.1|141802_143353_+	putative minor structural protein	NA	A0A286QQK5	Streptococcus_phage	31.0	1.4e-67
SQI07676.1|143349_146004_+	putative serine/threonine-rich protein P11E10.02c in chromosome I precursor	NA	A0A286QPB7	Streptococcus_phage	37.4	1.0e-134
SQI07677.1|146018_148031_+	prophage LambdaSa1, minor structural protein, putative	NA	A0A2I6QQW9	Streptococcus_phage	39.9	2.2e-121
SQI07678.1|148046_148382_+	Protein of uncharacterised function (DUF1366)	NA	A0A2I6QR31	Streptococcus_phage	62.6	3.3e-30
SQI07679.1|148407_148581_+	Uncharacterised protein	NA	A0A2I6QR42	Streptococcus_phage	81.8	3.5e-12
SQI07680.1|148602_148878_+	phage protein	NA	A0A0K0MWQ4	Streptococcus_phage	47.8	4.9e-16
SQI07681.1|148874_149198_+|holin,lysis	phage lysis protein, holin	holin,lysis	NA	NA	NA	NA
SQI07682.1|149538_150012_+	AP2 domain protein	NA	A0A2H4J2S8	uncultured_Caudovirales_phage	49.0	8.1e-35
SQI07683.1|150129_151146_+	phage-associated cell wall hydrolase	NA	A0A286QRL0	Streptococcus_phage	45.8	1.2e-19
SQI07684.1|151816_152203_+	Uncharacterised protein	NA	B3GW25	Streptococcus_phage	50.9	1.6e-25
SQI07685.1|152212_152821_+	AP2 domain	NA	A0A1P8BM92	Lactococcus_phage	44.3	5.6e-12
SQI07686.1|152977_153220_+	single-strand DNA-binding protein	NA	A0A075KL94	Lactobacillus_phage	41.8	1.2e-05
>prophage 2
LS483462	Streptococcus pasteurianus strain NCTC13784 genome assembly, chromosome: 1	2178089	371609	390986	2178089		Streptococcus_phage(94.44%)	18	NA	NA
SQI07890.1|371609_373031_+	xanthine/uracil permease family protein	NA	A0A0R6PHV4	Moraxella_phage	31.2	1.1e-42
SQI07891.1|373488_373803_+	Bacterial protein of uncharacterised function (DUF961)	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
SQI07892.1|373821_374205_+	Bacterial protein of uncharacterised function (DUF961)	NA	A0A1S5SF96	Streptococcus_phage	100.0	2.3e-64
SQI07893.1|374233_375619_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
SQI07894.1|375796_377002_+	transcriptional regulator protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
SQI07895.1|377044_377266_+	FIG086557: Conjugation related protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
SQI07896.1|377382_377880_+	Antirestriction protein	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
SQI07897.1|377854_378361_+	TcpE family	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
SQI07898.1|378344_380792_+	Type IV secretory pathway, VirB4 components	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
SQI07899.1|380794_382972_+	Tn916 ORF15 signal peptide containing protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
SQI07900.1|382968_383970_+	lipoprotein, NLP/P60 family	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
SQI07901.1|383966_384677_+	putative conjugative transposon protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	9.4e-128
SQI07902.1|385250_387170_+	tetracycline resistance protein TetM	NA	A0A1S5SF82	Streptococcus_phage	96.9	0.0e+00
SQI07903.1|387515_387869_-	anaerobic benzoate catabolism transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
SQI07904.1|388373_388796_+	RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
SQI07905.1|388792_389023_+	Helix-turn-helix domain	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
SQI07906.1|389483_389687_+	Mobile element protein	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
SQI07907.1|389768_390986_+	Mobile element protein	NA	A0A1S5SEW7	Streptococcus_phage	99.8	1.4e-232
>prophage 3
LS483462	Streptococcus pasteurianus strain NCTC13784 genome assembly, chromosome: 1	2178089	597610	610759	2178089	integrase	Streptococcus_phage(81.82%)	21	596178:596192	614934:614948
596178:596192	attL	TTTTATCAGTTGTAA	NA	NA	NA	NA
SQI08118.1|597610_599494_+	ions and phospholipids transporting ATPase	NA	E4ZFI9	Streptococcus_phage	36.4	8.1e-102
SQI08119.1|599651_599972_+	quaternary ammonium compound-resistance protein	NA	NA	NA	NA	NA
SQI08120.1|600188_600881_+	2,3-bisphosphoglycerate-dependent phospho glycerate mutase	NA	NA	NA	NA	NA
SQI08121.1|601028_602192_-|integrase	phage integrase family recombinase	integrase	A0A1X9I6A9	Streptococcus_phage	69.8	5.1e-155
SQI08122.1|602617_603223_-	putative transcriptional regulator	NA	Q20DG0	Lactobacillus_phage	45.1	1.2e-11
SQI08123.1|603374_603560_+	repressor-related protein	NA	A0A1X9I5U7	Streptococcus_phage	51.6	2.4e-06
SQI08124.1|603818_604136_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08125.1|604132_604327_+	phage membrane protein	NA	NA	NA	NA	NA
SQI08126.1|604341_604485_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08127.1|604488_604839_+	HTH domain protein	NA	NA	NA	NA	NA
SQI08128.1|604840_605107_+	phage protein	NA	A0A1X9I6M4	Streptococcus_phage	68.2	1.6e-27
SQI08129.1|605120_605963_+	replication protein	NA	A0A2P0VJ71	Streptococcus_phage	60.2	1.1e-69
SQI08130.1|605979_606825_+	putative phage replication protein	NA	A0A1X9I6C4	Streptococcus_phage	58.0	2.4e-82
SQI08131.1|606986_607289_+	phage protein	NA	NA	NA	NA	NA
SQI08132.1|607275_607440_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08133.1|607535_608129_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08134.1|608149_608581_+	putative autolysin regulatory protein arpU	NA	A0A2H4JEJ9	uncultured_Caudovirales_phage	55.1	1.7e-31
SQI08135.1|608861_609368_+	phage protein	NA	A0A1X9I5V2	Streptococcus_phage	54.7	1.7e-46
SQI08136.1|609427_609640_+	Uncharacterised protein	NA	E8ZDL3	Streptococcus_phage	60.0	3.8e-16
SQI08137.1|610272_610500_+	RelB protein	NA	NA	NA	NA	NA
SQI08138.1|610489_610759_+	addiction module toxin	NA	A0A1S5S8E8	Streptococcus_phage	51.2	3.5e-19
614934:614948	attR	TTACAACTGATAAAA	NA	NA	NA	NA
>prophage 4
LS483462	Streptococcus pasteurianus strain NCTC13784 genome assembly, chromosome: 1	2178089	660316	666610	2178089		Staphylococcus_phage(100.0%)	7	NA	NA
SQI08186.1|660316_661372_+	riboflavin biosynthesis protein	NA	A0A2H4PQS8	Staphylococcus_phage	33.2	2.8e-43
SQI08187.1|661371_661974_+	riboflavin synthase subunit alpha	NA	A0A2H4PQS5	Staphylococcus_phage	39.8	1.3e-32
SQI08188.1|661974_663153_+	bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein	NA	A0A2H4PQS2	Staphylococcus_phage	50.3	7.1e-104
SQI08189.1|663165_663627_+	riboflavin synthase subunit beta	NA	A0A2H4PQS3	Staphylococcus_phage	55.3	2.5e-41
SQI08190.1|663684_664545_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SQI08191.1|664728_665586_+	aldo/keto reductase family protein	NA	A0A2H4PQR8	Staphylococcus_phage	37.5	1.5e-50
SQI08192.1|665746_666610_+	aldo/keto reductase family protein	NA	A0A2H4PQR8	Staphylococcus_phage	40.1	1.3e-54
>prophage 5
LS483462	Streptococcus pasteurianus strain NCTC13784 genome assembly, chromosome: 1	2178089	828278	880518	2178089	transposase,protease	Bacillus_phage(23.08%)	53	NA	NA
SQI08325.1|828278_828497_-|transposase	transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	54.3	1.8e-13
SQI08326.1|828460_828997_-|transposase	IS861, transposase OrfB	transposase	A0A1B1P773	Bacillus_phage	46.2	5.1e-33
SQI08327.1|830028_830505_+	PTS system mannose/fructose/sorbose family transporter subunit IIAB	NA	NA	NA	NA	NA
SQI08328.1|830516_831311_+	PTS system mannose/fructose/sorbose family transporter subunit IIC	NA	NA	NA	NA	NA
SQI08329.1|831303_832113_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
SQI08330.1|832122_832542_+	PTS system mannose/fructose/sorbose family transporter subunit IIA	NA	NA	NA	NA	NA
SQI08331.1|832590_834273_+	oligo-1,6-glucosidase	NA	NA	NA	NA	NA
SQI08332.1|834508_835273_+	RpiR family glv operon transcriptional regulator	NA	NA	NA	NA	NA
SQI08333.1|835411_836815_+	basic amino acid/polyamine antiporter	NA	NA	NA	NA	NA
SQI08334.1|836865_838521_-	fibronectin/fibrinogen-binding protein	NA	A0A1J0F9J4	Only_Syngen_Nebraska_virus	41.9	1.3e-07
SQI08335.1|839117_840119_+	putative ABC transport system substrate-binding protein	NA	NA	NA	NA	NA
SQI08336.1|840139_841009_+	putative ABC transport system permease	NA	NA	NA	NA	NA
SQI08337.1|841005_841764_+	putative ABC transport system ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.0	4.8e-13
SQI08338.1|841961_843623_+	metallo-beta-lactamase superfamily protein	NA	NA	NA	NA	NA
SQI08339.1|843781_844495_+|protease	membrane-associated proteases	protease	NA	NA	NA	NA
SQI08340.1|844586_846506_+	ATP-binding cassette, sub-family F, member 3	NA	A0A2K9L3Z8	Tupanvirus	28.1	2.1e-49
SQI08341.1|846736_847183_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
SQI08342.1|847175_848927_+	ABC transporter	NA	W8CYL7	Bacillus_phage	28.2	4.1e-39
SQI08343.1|848926_850804_+	ABC transporter	NA	A0A076FI99	Aureococcus_anophage	32.7	1.1e-21
SQI08344.1|850903_851701_-|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	51.0	2.9e-61
SQI08345.1|851736_852252_-|transposase	transposase IS861 orfA	transposase	NA	NA	NA	NA
SQI08346.1|852722_853553_+	SIS (Sugar ISomerase) domain containing transcriptional regulator	NA	NA	NA	NA	NA
SQI08347.1|853549_854257_+	N-acylglucosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
SQI08348.1|854273_855773_+	PTS system sugar-specific transporter subunit IIBC	NA	NA	NA	NA	NA
SQI08349.1|856191_857160_+	pyruvate dehydrogenase E1 component alpha subunit	NA	NA	NA	NA	NA
SQI08350.1|857191_858196_+	pyruvate dehydrogenase E1 component subunit beta	NA	NA	NA	NA	NA
SQI08351.1|858210_859605_+	pyruvate dehydrogenase E2 component	NA	NA	NA	NA	NA
SQI08352.1|859750_861496_+	dihydrolipoamide dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.1	4.6e-35
SQI08353.1|861862_862033_+	iron complex transport system permease	NA	NA	NA	NA	NA
SQI08354.1|862613_863312_+	beta-lactamase domain-containing protein	NA	NA	NA	NA	NA
SQI08355.1|863318_863462_+	metallo-beta-lactamase superfamily enzyme	NA	NA	NA	NA	NA
SQI08356.1|864342_865332_+	lipoate-protein ligase A	NA	NA	NA	NA	NA
SQI08357.1|865418_865961_-	putative lipoprotein	NA	NA	NA	NA	NA
SQI08358.1|866018_866327_-	membrane protein	NA	S5MNN8	Brevibacillus_phage	62.3	1.9e-16
SQI08359.1|866478_867348_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SQI08360.1|867559_868420_+	Protein of uncharacterised function (DUF3737)	NA	NA	NA	NA	NA
SQI08361.1|868400_869582_+	aminotransferase	NA	NA	NA	NA	NA
SQI08362.1|869582_870059_+	lipoprotein	NA	NA	NA	NA	NA
SQI08363.1|870058_870511_+	lipoprotein	NA	NA	NA	NA	NA
SQI08364.1|870488_870989_+	5-nitroimidazole antibiotic resistance protein	NA	NA	NA	NA	NA
SQI08365.1|871120_872485_+	multi Antimicrobial Extrusion (MATE) family transporter	NA	NA	NA	NA	NA
SQI08366.1|872613_873777_+	major facilitator superfamily protein	NA	NA	NA	NA	NA
SQI08367.1|873885_874020_+	X-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
SQI08368.1|874285_874750_-	major facilitator superfamily protein	NA	NA	NA	NA	NA
SQI08369.1|874847_875315_+	NADPH-dependent FMN reductase	NA	A0A2P0ZL82	Lactobacillus_phage	59.8	1.5e-20
SQI08370.1|875346_876129_-	macro domain-containing protein	NA	A0A2K9L8X2	Tupanvirus	36.3	7.4e-25
SQI08371.1|876258_876519_-	Copper-sensing transcriptional repressor csoR	NA	NA	NA	NA	NA
SQI08372.1|876605_876989_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
SQI08373.1|876985_878641_+	pyridine nucleotide-disulfide oxidoreductase	NA	NA	NA	NA	NA
SQI08374.1|878633_878933_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
SQI08375.1|878966_879641_+	putative hydrolase, HD	NA	S4W232	Pandoravirus	26.2	4.3e-13
SQI08376.1|879701_880169_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
SQI08377.1|880161_880518_+|transposase	transposase IS4 family protein	transposase	NA	NA	NA	NA
>prophage 6
LS483462	Streptococcus pasteurianus strain NCTC13784 genome assembly, chromosome: 1	2178089	1105560	1114169	2178089		Bacillus_virus(33.33%)	8	NA	NA
SQI08600.1|1105560_1106481_+	type I pantothenate kinase	NA	A0A1B1ISL9	uncultured_Mediterranean_phage	33.5	2.4e-35
SQI08601.1|1106570_1106807_+	putative 30S ribosomal protein S20	NA	NA	NA	NA	NA
SQI08602.1|1106947_1108288_-	two-component system sensor histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	34.0	2.2e-08
SQI08603.1|1108277_1108952_-	Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	NA	W8CYM9	Bacillus_phage	32.7	4.4e-26
SQI08604.1|1109144_1111688_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.1	1.1e-66
SQI08605.1|1111910_1112564_-	phosphate transport system protein	NA	NA	NA	NA	NA
SQI08606.1|1112595_1113354_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.0	7.7e-19
SQI08607.1|1113365_1114169_-	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	NA	G3M9Y6	Bacillus_virus	29.5	5.8e-17
>prophage 7
LS483462	Streptococcus pasteurianus strain NCTC13784 genome assembly, chromosome: 1	2178089	1239023	1248247	2178089	tRNA	Bacillus_phage(37.5%)	8	NA	NA
SQI08738.1|1239023_1239515_-	7-cyano-7-deazaguanine reductase	NA	E7DN65	Pneumococcus_phage	61.6	2.8e-46
SQI08739.1|1239527_1240241_-	queuosine biosynthesis protein	NA	E7DN68	Pneumococcus_phage	47.1	2.4e-62
SQI08740.1|1240233_1240680_-	6-pyruvoyl tetrahydrobiopterin synthase	NA	J9PV91	Bacillus_phage	57.7	3.4e-43
SQI08741.1|1240679_1241333_-	queuosine biosynthesis protein QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	54.2	2.4e-61
SQI08742.1|1241583_1243353_-	ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.1	2.0e-57
SQI08743.1|1243355_1245095_-	ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	2.6e-38
SQI08744.1|1245173_1247045_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	32.1	3.9e-64
SQI08745.1|1247041_1248247_-|tRNA	tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	48.0	2.7e-42
>prophage 8
LS483462	Streptococcus pasteurianus strain NCTC13784 genome assembly, chromosome: 1	2178089	1376070	1396870	2178089		Streptococcus_phage(100.0%)	24	NA	NA
SQI08864.1|1376070_1376514_-	2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase	NA	E4ZFP3	Streptococcus_phage	98.7	8.1e-37
SQI08865.1|1376624_1376981_-	Uncharacterised protein	NA	A0A1B0RXM3	Streptococcus_phage	99.2	4.2e-60
SQI08866.1|1377004_1377577_-	putative transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	99.5	5.5e-102
SQI08867.1|1377852_1378647_-	aminoglycoside 3'-phosphotransferase	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
SQI08868.1|1378739_1379282_-	streptothricin acetyltransferase	NA	A0A1B0RXL7	Streptococcus_phage	100.0	8.9e-94
SQI08869.1|1379278_1380187_-	streptomycin aminoglycoside 6-adenyltransferase	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
SQI08870.1|1380219_1380828_-	methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	4.6e-115
SQI08871.1|1380811_1381567_-	RepE/RepS primase family protein	NA	NA	NA	NA	NA
SQI08872.1|1381877_1382201_-	transcriptional regulator	NA	NA	NA	NA	NA
SQI08873.1|1382444_1382558_-	Uncharacterised protein	NA	E4ZFP9	Streptococcus_phage	88.2	3.4e-08
SQI08874.1|1382562_1383300_-	erythromycin ribosome methylase	NA	E4ZFQ0	Streptococcus_phage	99.6	1.4e-134
SQI08875.1|1383664_1384075_-	Predicted dienelactone hydrolase	NA	NA	NA	NA	NA
SQI08876.1|1384287_1385142_-	putative conjugative transposon protein	NA	A0A1S5SF22	Streptococcus_phage	53.0	5.2e-80
SQI08877.1|1385195_1386203_-	lipoprotein, NLP/P60 family	NA	A0A1S5SEZ8	Streptococcus_phage	69.0	1.6e-133
SQI08878.1|1386199_1388332_-	Tn916 ORF15 signal peptide containing protein	NA	A0A1S5SF30	Streptococcus_phage	60.3	1.2e-181
SQI08879.1|1388331_1390782_-	Type IV secretory pathway, VirB4 components	NA	A0A1S5SF64	Streptococcus_phage	76.6	0.0e+00
SQI08880.1|1390768_1391158_-	TcpE family	NA	A0A1S5SEX7	Streptococcus_phage	73.0	2.4e-48
SQI08881.1|1391322_1391826_-	Antirestriction protein	NA	A0A1S5SF25	Streptococcus_phage	56.6	1.7e-51
SQI08882.1|1391841_1392339_-	Antirestriction protein	NA	A0A1S5SF25	Streptococcus_phage	41.2	5.0e-27
SQI08883.1|1392621_1393638_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08884.1|1393708_1393930_-	conjugative transposon protein	NA	A0A1S5SEY0	Streptococcus_phage	86.3	1.2e-28
SQI08885.1|1393930_1394068_-	Protein of uncharacterised function (DUF3789)	NA	NA	NA	NA	NA
SQI08886.1|1394074_1395196_-	transcriptional regulator protein	NA	A0A1S5SEX3	Streptococcus_phage	63.5	1.9e-135
SQI08887.1|1395475_1396870_-	Tn916 ORF21 FtsK/SpoIIIE family protein	NA	A0A1S5SFB5	Streptococcus_phage	66.2	9.7e-177
>prophage 9
LS483462	Streptococcus pasteurianus strain NCTC13784 genome assembly, chromosome: 1	2178089	1403886	1465340	2178089	portal,holin,tail,terminase,transposase,tRNA,protease,integrase	Streptococcus_phage(65.31%)	78	1439962:1439977	1469470:1469485
SQI08898.1|1403886_1405248_-|tRNA	tRNA (Uracil-5-)-methyltransferase family protein	tRNA	F5CA72	Streptococcus_phi-m46.1-like_phage	79.2	2.5e-206
SQI08899.1|1405357_1406800_-	putative transcriptional repressor	NA	NA	NA	NA	NA
SQI08900.1|1406886_1407711_-	prephenate dehydratase	NA	NA	NA	NA	NA
SQI08901.1|1407707_1408184_-	shikimate kinase	NA	NA	NA	NA	NA
SQI08902.1|1408176_1409460_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQI08903.1|1409681_1411517_-	GTP-binding protein LepA	NA	A0A2K9L2P9	Tupanvirus	38.8	3.8e-19
SQI08904.1|1414661_1415711_-	CRISPR-associated protein Cas7	NA	NA	NA	NA	NA
SQI08905.1|1415707_1416031_-	CRISPR-associated endoribonuclease Cas2	NA	NA	NA	NA	NA
SQI08906.1|1416032_1416944_-	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
SQI08907.1|1417116_1420509_-	CRISPR-associated protein	NA	NA	NA	NA	NA
SQI08908.1|1420625_1421042_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	47.1	1.0e-25
SQI08909.1|1421659_1421977_+|transposase	ISSth1, transposase (orf1), IS3 family	transposase	A0A0C5AJ29	Paenibacillus_phage	48.5	2.1e-18
SQI08910.1|1422057_1422939_+|transposase	transposase IS3/IS911 family protein	transposase	A0A0C5AC89	Paenibacillus_phage	48.7	6.1e-52
SQI08911.1|1423314_1423617_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08912.1|1423613_1424162_-	Uncharacterised protein	NA	A0A2I6QQV9	Streptococcus_phage	56.0	6.7e-49
SQI08913.1|1424183_1424522_-	Streptococcus thermophilus bacteriophage Gp111 protein	NA	O21984	Streptococcus_virus	57.5	1.4e-25
SQI08914.1|1425483_1425903_-	phage protein	NA	NA	NA	NA	NA
SQI08915.1|1426144_1426990_-	putative lysin	NA	W6LMV8	Streptococcus_phage	71.7	1.8e-117
SQI08916.1|1426986_1427313_-|holin	holin	holin	Q56S81	Streptococcus_virus	86.1	3.3e-43
SQI08917.1|1427325_1427658_-	Uncharacterised protein	NA	Q56S82	Streptococcus_virus	90.0	3.6e-45
SQI08918.1|1427679_1427850_-	Uncharacterised protein	NA	A0A2I6QR42	Streptococcus_phage	84.1	6.9e-13
SQI08919.1|1427875_1428211_-	phage protein	NA	A0A2I6QR31	Streptococcus_phage	58.9	7.5e-27
SQI08920.1|1428226_1430230_-	prophage LambdaSa1, minor structural protein, putative	NA	A0A286QNJ5	Streptococcus_phage	38.6	5.2e-115
SQI08921.1|1430244_1433775_-	putative antireceptor	NA	W6LP73	Streptococcus_phage	37.1	8.2e-156
SQI08922.1|1433771_1435277_-|tail	prophage LambdaSa03, tail component	tail	Q2I7P7	Streptococcus_phage	51.4	1.4e-32
SQI08923.1|1435270_1439311_-|tail	phage tail protein	tail	A0A2H4JEN9	uncultured_Caudovirales_phage	38.3	1.5e-76
SQI08924.1|1439529_1439871_-	phage protein	NA	M1NRL6	Streptococcus_phage	55.0	8.5e-26
SQI08925.1|1439919_1440471_-|tail	major tail protein	tail	M1PRQ7	Streptococcus_phage	72.9	1.4e-70
1439962:1439977	attL	GTCAAATCCGTCAGCA	NA	NA	NA	NA
SQI08926.1|1440491_1440920_-	phage protein	NA	J7KBZ9	Streptococcus_phage	72.5	2.1e-53
SQI08927.1|1440916_1441291_-	phage protein	NA	J7KDM3	Streptococcus_phage	70.4	1.9e-42
SQI08928.1|1441287_1441641_-	phage protein	NA	M1PFA2	Streptococcus_phage	60.3	1.0e-34
SQI08929.1|1441627_1441939_-	phage protein	NA	J7KC36	Streptococcus_phage	81.6	7.2e-40
SQI08930.1|1442081_1443260_-	phage protein	NA	J7KJ82	Streptococcus_phage	67.8	4.4e-146
SQI08931.1|1443297_1443975_-|protease	phage ClpP protease	protease	M1Q115	Streptococcus_phage	77.8	3.6e-92
SQI08932.1|1443931_1445158_-|portal	phage portal protein	portal	A0A2H4JGQ4	uncultured_Caudovirales_phage	78.5	2.6e-181
SQI08933.1|1445328_1447011_-|terminase	phage terminase, large subunit	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	78.9	3.0e-265
SQI08934.1|1447097_1447322_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08935.1|1447339_1447810_-|terminase	phage terminase, small subunit	terminase	M1PKP2	Streptococcus_phage	59.4	5.8e-49
SQI08936.1|1447996_1448335_-	Phage endonuclease	NA	J7KH36	Streptococcus_phage	64.9	1.7e-39
SQI08937.1|1448447_1448891_-	phage protein	NA	A0A0B5A564	Streptococcus_phage	48.6	8.7e-31
SQI08938.1|1449259_1449439_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08939.1|1449431_1449650_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08940.1|1449646_1449844_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08941.1|1449834_1450389_-	Uncharacterised protein	NA	A0A2K9V537	Lactobacillus_phage	48.6	1.4e-46
SQI08942.1|1450378_1450747_-	phage protein	NA	A0A1S5SFT9	Streptococcus_phage	37.5	3.7e-11
SQI08943.1|1450743_1451274_-	phage protein	NA	Q9MCL5	Streptococcus_virus	37.6	4.2e-16
SQI08944.1|1451266_1451428_-	Uncharacterised protein	NA	A0A1L2JXW7	Streptococcus_phage	60.4	2.0e-09
SQI08945.1|1451498_1451939_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08946.1|1451935_1452175_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08947.1|1452176_1452341_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08948.1|1452337_1452784_-	crossover junction endodeoxyribonuclease RusA	NA	M1Q131	Streptococcus_phage	64.4	1.0e-47
SQI08949.1|1452792_1453098_-	phage protein	NA	A6MA87	Lactococcus_virus	34.1	1.8e-06
SQI08950.1|1453234_1454065_-	phage protein	NA	A0A1S5S8V6	Streptococcus_phage	73.1	1.5e-121
SQI08951.1|1454057_1454996_-	Recombinational DNA repair protein RecT (prophage associated)	NA	A0A1S5S8V5	Streptococcus_phage	81.1	4.6e-106
SQI08952.1|1455040_1455208_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08953.1|1455204_1455393_-	Uncharacterised protein	NA	Q708Q3	Streptococcus_phage	63.0	1.3e-07
SQI08954.1|1455389_1455614_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08955.1|1455610_1455781_-	phage protein	NA	NA	NA	NA	NA
SQI08956.1|1455777_1456356_-	Protein of uncharacterised function (DUF1642)	NA	NA	NA	NA	NA
SQI08957.1|1456365_1456518_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08958.1|1456514_1456841_-	phage protein	NA	A0A1P8VVU1	Streptococcus_phage	52.8	4.9e-23
SQI08959.1|1456837_1457053_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08960.1|1457043_1457844_-	phage replication protein	NA	A0A2I6QQU8	Streptococcus_phage	49.4	1.6e-62
SQI08961.1|1457847_1458174_-	phage DNA replication protein	NA	Q938N2	Temperate_phage	49.5	7.3e-19
SQI08962.1|1458675_1458774_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08963.1|1458763_1459558_-	C-5 cytosine-specific DNA methylase	NA	U4KJA1	Streptococcus_phage	78.0	8.7e-114
SQI08964.1|1459568_1459745_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08965.1|1459746_1459998_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08966.1|1460031_1460283_-	phage protein	NA	A0A1S5SFD5	Streptococcus_phage	68.2	2.1e-26
SQI08967.1|1460381_1460741_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08968.1|1460724_1460925_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI08969.1|1461067_1461805_-	P1-type antirepressor	NA	Q938N5	Temperate_phage	69.3	4.1e-94
SQI08970.1|1461817_1462057_-	prophage pi2 protein 05	NA	O34036	Streptococcus_phage	94.9	1.2e-34
SQI08971.1|1462221_1462611_+	prophage LambdaSa03, transcriptional regulator,Cro/CI family	NA	O34035	Streptococcus_phage	89.1	1.7e-54
SQI08972.1|1462600_1462987_+	putative cI-like repressor, metallo-prtoeinase motif-phage-associated (Putative uncharacterized protein SPs0513)	NA	O34034	Streptococcus_phage	93.0	6.1e-65
SQI08973.1|1463002_1463338_+	HIRAN domain	NA	NA	NA	NA	NA
SQI08974.1|1463391_1463973_+	signal peptide	NA	O64371	Lactobacillus_phage	44.2	4.2e-09
SQI08975.1|1464179_1465340_+|integrase	phage integrase	integrase	A0A141E192	Streptococcus_phage	42.2	5.6e-77
1469470:1469485	attR	GTCAAATCCGTCAGCA	NA	NA	NA	NA
>prophage 10
LS483462	Streptococcus pasteurianus strain NCTC13784 genome assembly, chromosome: 1	2178089	1681054	1687132	2178089		Streptococcus_phage(100.0%)	8	NA	NA
SQI09178.1|1681054_1681882_+	Exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.8	1.3e-125
SQI09179.1|1682315_1682819_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SQI09180.1|1682955_1683312_-	ArsC family transcription regulator	NA	M1PLC0	Streptococcus_phage	59.1	8.0e-35
SQI09181.1|1683324_1683810_-	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	52.8	1.9e-42
SQI09182.1|1683995_1684097_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI09183.1|1684197_1685376_-	D-3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	80.6	5.1e-179
SQI09184.1|1685421_1685970_-	GNAT family acetyltransferase	NA	M1PSC3	Streptococcus_phage	57.9	8.8e-57
SQI09185.1|1686040_1687132_-	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	82.0	2.7e-174
>prophage 11
LS483462	Streptococcus pasteurianus strain NCTC13784 genome assembly, chromosome: 1	2178089	1690252	1696252	2178089		Streptococcus_phage(71.43%)	8	NA	NA
SQI09189.1|1690252_1691119_-	tetrapyrrole (Corrin/Porphyrin) methylase	NA	M1PLC5	Streptococcus_phage	71.5	3.2e-114
SQI09190.1|1691125_1691446_-	DNA replication intiation control protein	NA	M1PFV3	Streptococcus_phage	61.3	1.5e-29
SQI09191.1|1691438_1692122_-	signal peptidase II	NA	NA	NA	NA	NA
SQI09192.1|1692234_1693110_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	50.3	9.6e-74
SQI09193.1|1693120_1693756_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	65.7	5.5e-71
SQI09194.1|1693944_1694604_-	acetoin utilization protein	NA	M1NSC5	Streptococcus_phage	65.1	2.8e-73
SQI09195.1|1694777_1695488_-	branched-chain amino acid transport system ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.8	2.3e-17
SQI09196.1|1695487_1696252_-	branched-chain amino acid transport system ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.2	5.5e-17
>prophage 12
LS483462	Streptococcus pasteurianus strain NCTC13784 genome assembly, chromosome: 1	2178089	2154501	2162604	2178089		Staphylococcus_phage(33.33%)	9	NA	NA
SQI09646.1|2154501_2155131_-	transglycosylase-like protein	NA	Q4Z8Z7	Staphylococcus_phage	68.5	1.2e-25
SQI09647.1|2155338_2155923_-	Aggregation promoting factor	NA	A0A0A7NNK8	Lactobacillus_phage	66.3	2.0e-19
SQI09648.1|2156055_2156853_-	cobalt/nickel transport system permease protein	NA	NA	NA	NA	NA
SQI09649.1|2156845_2157688_-	cobalt/nickel transport system ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	6.8e-16
SQI09650.1|2157663_2158506_-	cobalt/nickel transport system ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.5	5.0e-19
SQI09651.1|2158502_2158994_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
SQI09652.1|2159064_2160006_-	membrane protein	NA	NA	NA	NA	NA
SQI09653.1|2160069_2161359_-	insulinase, M16 family peptidase	NA	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	31.7	1.2e-19
SQI09654.1|2161359_2162604_-	M16 family peptidase	NA	A0A1X9I714	Streptococcus_phage	43.2	1.9e-91
