The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	793035	862228	4042926	protease,portal,terminase,tail,head,capsid,plate	Salmonella_phage(35.9%)	74	NA	NA
SQI31894.1|793035_793656_+|protease	ATP-dependent Clp protease proteolytic subunit precursor	protease	A0A223W000	Agrobacterium_phage	63.9	8.4e-64
SQI31895.1|793773_795051_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	57.5	7.3e-131
SQI31896.1|795283_796222_+|protease	Lon protease	protease	A0A0R6PGP8	Moraxella_phage	28.5	2.4e-22
SQI31897.1|796181_797714_+|protease	Lon protease	protease	A0A0R6PGP8	Moraxella_phage	65.7	1.3e-187
SQI31899.1|797953_798229_+	NS1	NA	A4JWM7	Burkholderia_virus	61.8	3.0e-21
SQI31900.1|798402_800271_+	Peptidyl-prolyl cis-trans isomerase D	NA	NA	NA	NA	NA
SQI31901.1|800434_800806_+	competence protein ComEA helix-hairpin-helix repeat region	NA	NA	NA	NA	NA
SQI31902.1|801052_801481_+	Long-chain acyl-CoA thioesterase FadM	NA	NA	NA	NA	NA
SQI31903.1|801515_802127_-	7-cyano-7-deazaguanine synthase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	67.7	1.8e-71
SQI31904.1|802448_802910_+	Leucine-responsive regulatory protein	NA	NA	NA	NA	NA
SQI31905.1|803007_804753_+	Probable multidrug resistance ABC transporter ATP-binding/permease protein YheI	NA	W8CYL7	Bacillus_phage	29.2	4.6e-51
SQI31906.1|804749_805019_+	Multidrug resistance-like ATP-binding protein MdlB	NA	NA	NA	NA	NA
SQI31907.1|804969_806532_+	Multidrug resistance-like ATP-binding protein MdlB	NA	W8CYL7	Bacillus_phage	27.3	1.9e-35
SQI31908.1|806678_807545_-	Acyl-CoA thioesterase 2	NA	NA	NA	NA	NA
SQI31909.1|807783_808242_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI31910.1|808856_809060_-	Histone-like protein	NA	NA	NA	NA	NA
SQI31911.1|809132_809501_-	Toxin overexpression modulator in biofilms	NA	NA	NA	NA	NA
SQI31912.1|810026_811406_-	Membrane-bound lytic murein transglycosylase D precursor	NA	A0A0S2SXN2	Bacillus_phage	38.7	5.0e-08
SQI31913.1|811488_812241_-	Hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
SQI31914.1|812277_813003_+	Methyltransferase domain	NA	NA	NA	NA	NA
SQI31922.1|813015_813486_-	Ribonuclease HI	NA	J9Q745	Salmonella_phage	57.9	3.4e-49
SQI31941.1|813540_814302_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	37.4	3.3e-38
SQI31946.1|815546_816056_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI31949.1|816121_820465_+	HYR domain	NA	NA	NA	NA	NA
SQI31950.1|820753_821620_+	type I secretion outer membrane protein, TolC family	NA	NA	NA	NA	NA
SQI31953.1|821606_821807_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI31956.1|821810_824027_+	RTX-I toxin determinant B	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.4	1.4e-28
SQI31957.1|824028_825264_+	Type I secretion system membrane fusion protein PrsE	NA	NA	NA	NA	NA
SQI31959.1|825736_827731_+	Transketolase 1	NA	NA	NA	NA	NA
SQI31962.1|828051_829071_+	D-erythrose-4-phosphate dehydrogenase	NA	NA	NA	NA	NA
SQI31963.1|829174_830338_+	Phosphoglycerate kinase	NA	NA	NA	NA	NA
SQI31968.1|830398_831475_+	Fructose-bisphosphate aldolase class 2	NA	NA	NA	NA	NA
SQI31969.1|831584_831836_-	anaerobic benzoate catabolism transcriptional regulator	NA	NA	NA	NA	NA
SQI31971.1|831867_833256_-	Lipid A core - O-antigen ligase and related enzymes	NA	NA	NA	NA	NA
SQI31973.1|833277_834333_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI31976.1|834348_834855_-	P pilus assembly protein, pilin FimA	NA	NA	NA	NA	NA
SQI32014.1|834865_835402_-	Major MR/P fimbria protein precursor	NA	NA	NA	NA	NA
SQI32016.1|835394_835760_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI32017.1|835788_836517_-	Chaperone protein papD precursor	NA	NA	NA	NA	NA
SQI32025.1|836529_839019_-	Outer membrane usher protein papC precursor	NA	NA	NA	NA	NA
SQI32029.1|839055_839649_-	long polar fimbrial protein LpfA	NA	NA	NA	NA	NA
SQI32030.1|839654_840011_-	Pap fimbrial major pilin protein precursor	NA	NA	NA	NA	NA
SQI32033.1|839967_840207_-	Major MR/P fimbria protein precursor	NA	NA	NA	NA	NA
SQI32034.1|840676_841159_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI32037.1|841167_841968_-	DNA-binding transcriptional regulator BaeR	NA	NA	NA	NA	NA
SQI32038.1|842273_842492_-	DNA-binding transcriptional regulator	NA	Q53ZE7	Salmonella_virus	67.6	5.2e-21
SQI32039.1|842565_843651_-	Phage protein D	NA	E5G6Q3	Salmonella_phage	59.2	4.6e-118
SQI32040.1|843647_844094_-	Phage protein U	NA	Q6K1G5	Salmonella_virus	57.3	2.2e-42
SQI32041.1|844096_845098_-|tail	Phage-related minor tail protein	tail	A0A1S6L010	Salmonella_phage	31.1	2.6e-22
SQI32042.1|845192_846710_-	Phage-related protein	NA	A0A2H4JE61	uncultured_Caudovirales_phage	43.8	3.8e-94
SQI32043.1|846836_847142_-|tail	Phage tail protein E	tail	F1BUU0	Erwinia_phage	55.1	2.6e-18
SQI32044.1|847157_847673_-|tail	phage major tail tube protein	tail	A0A1S6L002	Salmonella_phage	64.3	1.8e-59
SQI32045.1|847675_848848_-|tail	Phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	72.9	2.2e-166
SQI32046.1|848964_849492_-|tail	Bacteriophage tail assembly protein	tail	F1BUK2	Cronobacter_phage	45.6	8.8e-30
SQI32047.1|849500_850733_-	Uncharacterised protein	NA	A0A1S6KZZ8	Salmonella_phage	41.7	8.6e-60
SQI32048.1|850729_851341_-|tail	Bacteriophage P2-related tail formation protein	tail	F1BUP2	Erwinia_phage	65.8	4.7e-75
SQI32049.1|851333_852245_-	Uncharacterized homolog of phage Mu protein gp47	NA	A0A218M4K5	Erwinia_phage	64.4	1.3e-102
SQI32050.1|852247_852589_-|plate	Phage P2 baseplate assembly protein gpV	plate	F1BUP4	Erwinia_phage	57.7	9.7e-30
SQI32051.1|852585_852702_-	Uncharacterised protein	NA	A0A0A7NRZ3	Enterobacteria_phage	63.2	3.9e-07
SQI32052.1|852698_852938_-|plate	Phage P2 baseplate assembly protein gpV	plate	A0A2I8TV69	Erwinia_phage	60.0	1.4e-14
SQI32053.1|852997_853207_-|plate	Phage P2 baseplate assembly protein gpV	plate	S4TUB5	Salmonella_phage	65.2	1.3e-16
SQI32054.1|853213_853594_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI32055.1|853682_854300_-	phage virion morphogenesis protein	NA	A0A0M4RCU1	Salmonella_phage	35.6	4.5e-25
SQI32056.1|854296_854770_-|tail	P2 phage tail completion protein R (GpR)	tail	E5G6N3	Salmonella_phage	40.8	1.3e-24
SQI32057.1|855365_855623_-	Peptidase M15	NA	NA	NA	NA	NA
SQI32058.1|855626_855923_-	Uncharacterised protein	NA	E7C9S8	Salmonella_phage	57.0	2.0e-23
SQI32059.1|855929_856133_-	Phage Tail Protein X	NA	E5E3W5	Burkholderia_phage	57.4	8.0e-16
SQI32060.1|856129_856606_-|head	Phage head completion protein (GPL)	head	A0A0F7LDJ1	Escherichia_phage	40.0	3.2e-23
SQI32061.1|856691_857327_-|terminase	Phage small terminase subunit	terminase	V9IQK3	Stenotrophomonas_phage	40.0	4.0e-21
SQI32062.1|857353_858436_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	62.1	4.5e-121
SQI32063.1|858448_859276_-|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	capsid	F1BUR1	Erwinia_phage	45.6	8.0e-54
SQI32064.1|859432_860338_+	Uncharacterized conserved protein	NA	A0A1S6KZW3	Salmonella_phage	72.1	3.6e-116
SQI32065.1|860354_861191_+	Uncharacterized conserved protein	NA	A0A1S6KZW3	Salmonella_phage	75.2	4.7e-126
SQI32066.1|861190_862228_+|portal	phage portal protein, PBSX family	portal	A0A1S6KZW5	Salmonella_phage	72.0	2.0e-139
>prophage 2
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	867398	875667	4042926		Enterobacteria_phage(28.57%)	13	NA	NA
SQI32071.1|867398_868532_-	Domain of uncharacterised function (DUF955)	NA	B6SBZ6	Clostridium_virus	28.7	7.2e-29
SQI32072.1|868542_868929_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI32073.1|868916_869135_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI32074.1|869336_872114_-	Bacteriophage replication gene A protein (GPA)	NA	E5G6L9	Salmonella_phage	36.8	7.7e-109
SQI32075.1|872241_872541_-	Domain of Uncharacterised Function with PDB structure	NA	A0A059T699	Listeria_phage	46.6	1.7e-09
SQI32076.1|872541_872763_-	conjugal transfer protein TraR	NA	A0A0M3LS11	Mannheimia_phage	52.8	3.4e-12
SQI32077.1|872755_873010_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI32078.1|873079_873499_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI32079.1|873507_873669_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI32080.1|873673_873898_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI32081.1|873894_874194_-	Regulatory phage protein cox	NA	Q1JS60	Enterobacteria_phage	67.0	3.2e-29
SQI32084.1|874317_874617_+	Uncharacterised protein	NA	Q1JS61	Enterobacteria_phage	69.7	2.2e-33
SQI32087.1|874683_875667_+	Tyrosine recombinase XerD	NA	Q83VS6	Escherichia_phage	56.2	2.4e-105
>prophage 3
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	1024196	1032822	4042926		Mycobacterium_phage(25.0%)	11	NA	NA
SQI32693.1|1024196_1025168_-	Ribonucleoside-diphosphate reductase 2 subunit beta	NA	A0A0M4S3B4	Mycobacterium_phage	72.5	3.9e-132
SQI32698.1|1025353_1026625_-	Ribonucleoside-diphosphate reductase subunit alpha 2	NA	V9VI16	Lactococcus_phage	53.3	1.6e-117
SQI32699.1|1026662_1026977_-	Ribonucleoside-diphosphate reductase 2 subunit alpha	NA	A8E2R1	Enterococcus_phage	61.4	5.8e-29
SQI32707.1|1026957_1027317_-	Ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4P8B4	Corynebacterium_phage	64.2	4.9e-32
SQI32710.1|1027309_1027744_-	ribonucleotide reductase stimulatory protein	NA	A0A142F1R4	Bacillus_phage	34.1	1.4e-12
SQI32716.1|1027755_1027983_-	Glutaredoxin-like protein nrdH	NA	V5UN81	Mycobacterium_phage	52.1	2.8e-17
SQI32718.1|1028281_1028740_+	Methylated-DNA--protein-cysteine methyltransferase, constitutive	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	43.1	1.0e-18
SQI32725.1|1029353_1030319_-	Lipoyl synthase	NA	NA	NA	NA	NA
SQI32728.1|1030744_1031017_-	Octanoyltransferase	NA	NA	NA	NA	NA
SQI32730.1|1031174_1031438_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQI32737.1|1031592_1032822_-	D-alanyl-D-alanine carboxypeptidase dacA precursor	NA	B6DZZ7	Stx2-converting_phage	48.8	9.6e-104
>prophage 4
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	1187065	1240978	4042926	portal,tail,head,capsid,lysis,plate,tRNA	Enterobacteria_phage(18.6%)	74	NA	NA
SQI33064.1|1187065_1189093_-|tRNA	Methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.7	3.6e-55
SQI33065.1|1189331_1190444_+	antiporter inner membrane protein	NA	NA	NA	NA	NA
SQI33066.1|1190662_1191223_+	LemA family	NA	NA	NA	NA	NA
SQI33067.1|1191252_1192209_+	Protease HtpX homolog	NA	NA	NA	NA	NA
SQI33068.1|1192360_1193005_+	Uridine kinase	NA	A0A1V0SAA3	Catovirus	41.7	1.7e-38
SQI33069.1|1193071_1193455_+	Deoxycytidine triphosphate deaminase	NA	NA	NA	NA	NA
SQI33070.1|1193426_1193654_+	Deoxycytidine triphosphate deaminase	NA	NA	NA	NA	NA
SQI33071.1|1193770_1195609_+	putative assembly protein	NA	NA	NA	NA	NA
SQI33072.1|1195884_1196220_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33073.1|1196405_1197722_-	magnesium/cobalt efflux protein CorC	NA	A0A0R6PEZ3	Moraxella_phage	41.9	5.8e-22
SQI33074.1|1197858_1197990_-	Integral membrane protein TerC family	NA	NA	NA	NA	NA
SQI33075.1|1198232_1199639_+	6-phosphogluconate dehydrogenase, decarboxylating	NA	A0A1D7RI04	Synechococcus_phage	29.8	3.5e-33
SQI33076.1|1199706_1199958_-	Pyocin activator protein PrtN	NA	A0A1W6JP35	Morganella_phage	62.0	1.1e-19
SQI33077.1|1200155_1200734_-	phage N-6-adenine-methyltransferase	NA	A0A1W6JP96	Morganella_phage	60.3	1.4e-57
SQI33078.1|1200690_1200909_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33079.1|1200868_1201213_-	Protein of uncharacterised function (DUF2591)	NA	A0A1P8DTH6	Proteus_phage	52.5	7.2e-17
SQI33080.1|1201205_1201391_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33081.1|1201548_1201779_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33082.1|1201847_1202099_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33083.1|1202142_1202676_-	Uncharacterised protein	NA	R9VWB9	Serratia_phage	27.5	2.0e-13
SQI33084.1|1202845_1203181_-	Uncharacterised protein	NA	A0A1C9LVV9	Vibrio_phage	39.9	4.1e-25
SQI33085.1|1203219_1203675_-	Helix-destabilizing protein	NA	A0A1W6JNW8	Morganella_phage	76.0	1.0e-42
SQI33106.1|1203664_1204471_-	P33	NA	A0A1P8DTF2	Proteus_phage	85.0	1.1e-127
SQI33108.1|1204448_1205282_-	Exodeoxyribonuclease 8	NA	A0A1P8DTH1	Proteus_phage	83.1	1.5e-137
SQI33113.1|1205278_1205446_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33114.1|1205455_1205632_-	Uncharacterised protein	NA	A0A1P8DTG5	Proteus_phage	57.9	1.5e-10
SQI33115.1|1205573_1205756_-	Uncharacterised protein	NA	A0A1P8DTH8	Proteus_phage	80.0	5.3e-19
SQI33116.1|1205863_1206088_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33117.1|1206560_1206878_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33118.1|1207321_1208086_-	KilA-N domain	NA	K7YGK4	Megavirus	45.6	2.1e-08
SQI33119.1|1208185_1208488_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33120.1|1208509_1208851_-	Protein of uncharacterised function (DUF3024)	NA	A0A1W6JP12	Morganella_phage	58.4	6.9e-36
SQI33121.1|1209247_1209892_-	Uncharacterized HTH-type transcriptional regulator CBU_1416	NA	K7PH19	Enterobacteria_phage	64.7	5.8e-76
SQI33122.1|1209997_1210207_+	Helix-turn-helix	NA	K7PKH4	Enterobacteria_phage	79.4	2.0e-25
SQI33123.1|1210308_1210632_+	Uncharacterised protein	NA	A0A1W6JNY4	Morganella_phage	80.2	2.5e-35
SQI33158.1|1210618_1210879_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33161.1|1210989_1211952_+	phage replication protein O, N-terminal domain	NA	K7PGZ0	Enterobacteria_phage	41.0	7.1e-62
SQI33163.1|1211948_1212635_+	Replication protein P	NA	A0A1P8DTF3	Proteus_phage	52.5	2.8e-60
SQI33167.1|1212644_1213550_+	Recombination-associated protein rdgC	NA	S4TWL4	Salmonella_phage	58.1	4.6e-95
SQI33168.1|1214082_1214532_+	Uncharacterised protein	NA	A0A2I7R8L6	Vibrio_phage	36.9	2.2e-13
SQI33170.1|1214528_1214744_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33171.1|1214744_1215203_+	Bacteriophage Lambda NinG protein	NA	C6ZR60	Salmonella_phage	76.2	7.3e-65
SQI33174.1|1215199_1215484_+	Phage NinH protein	NA	NA	NA	NA	NA
SQI33177.1|1215487_1215856_+	Phage antitermination protein Q	NA	A0A088CD47	Shigella_phage	70.5	1.0e-45
SQI33179.1|1216051_1217722_-	E3 ubiquitin-protein ligase ipaH3	NA	NA	NA	NA	NA
SQI33181.1|1218064_1218370_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33183.1|1218362_1218848_+	Uncharacterised protein	NA	A0A1U9ZAE8	Proteus_phage	73.7	4.0e-61
SQI33185.1|1219192_1219663_+|lysis	Bacteriophage lysis protein	lysis	M1FJ79	Enterobacteria_phage	32.3	1.9e-12
SQI33187.1|1219840_1220110_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33188.1|1221863_1222412_+	Phage DNA packaging protein Nu1	NA	A0A0U2S671	Escherichia_phage	77.0	3.8e-52
SQI33190.1|1222383_1224300_+|tail	Bacteriophage tail assembly protein	tail	A0A0K2FJ14	Enterobacteria_phage	63.0	2.1e-246
SQI33192.1|1224301_1224508_+	gpW	NA	K7PM10	Enterobacteria_phage	45.6	4.8e-08
SQI33194.1|1224504_1226082_+|portal	phage portal protein, lambda family	portal	E4WL21	Enterobacteria_phage	63.3	8.4e-185
SQI33196.1|1226071_1227553_+	Protease 4	NA	A0A2I6TC87	Escherichia_phage	51.1	8.1e-97
SQI33198.1|1227590_1227806_+|head	Bacteriophage lambda head decoration protein D	head	NA	NA	NA	NA
SQI33200.1|1227750_1227930_+|head	Bacteriophage lambda head decoration protein D	head	NA	NA	NA	NA
SQI33203.1|1227956_1228985_+|capsid	Phage major capsid protein E	capsid	C6ZCY2	Enterobacteria_phage	57.2	6.6e-106
SQI33206.1|1228985_1229411_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33208.1|1229403_1229760_+	Phage Head-Tail Attachment	NA	NA	NA	NA	NA
SQI33209.1|1229763_1230429_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33211.1|1230431_1230977_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33214.1|1230969_1231530_+|plate	Phage P2 baseplate assembly protein gpV	plate	A0A1B2LRU5	Wolbachia_phage	35.5	1.9e-14
SQI33216.1|1231627_1233106_+|tail	Phage tail sheath protein	tail	R9TMQ0	Vibrio_phage	37.5	1.1e-77
SQI33219.1|1233102_1233609_+|tail	phage major tail tube protein	tail	NA	NA	NA	NA
SQI33220.1|1233666_1233972_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33234.1|1234074_1235703_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33235.1|1235696_1236182_+	Phage protein U	NA	K4I406	Acidithiobacillus_phage	38.0	9.3e-18
SQI33237.1|1236156_1236372_+	Phage Tail Protein X	NA	R9TR63	Vibrio_phage	47.1	1.2e-09
SQI33239.1|1236375_1237506_+	Phage protein D	NA	D4HTW7	Vibrio_phage	36.1	1.5e-34
SQI33241.1|1237512_1237866_+	Gene 25-like lysozyme	NA	V5YTB2	Pseudomonas_phage	51.8	6.9e-23
SQI33242.1|1237849_1238752_+	Uncharacterized homolog of phage Mu protein gp47	NA	D5LGZ3	Escherichia_phage	47.7	5.5e-64
SQI33243.1|1238757_1239300_+|tail	Bacteriophage P2-related tail formation protein	tail	A0A0F7LDF3	Escherichia_phage	39.0	2.7e-26
SQI33244.1|1239314_1240442_+	Uncharacterised protein	NA	A0A0M3LS19	Mannheimia_phage	45.7	2.9e-22
SQI33245.1|1240450_1240978_+|tail	Bacteriophage tail assembly protein	tail	F1BUK2	Cronobacter_phage	46.2	5.1e-30
>prophage 5
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	1286640	1344528	4042926	protease,portal,terminase,tail,head,capsid,lysis,tRNA	Morganella_phage(31.03%)	82	NA	NA
SQI33447.1|1286640_1286880_-	Cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	58.5	2.3e-14
SQI33449.1|1287170_1288304_-	Site-specific recombinase XerC	NA	Q77Z04	Phage_21	65.7	2.9e-139
SQI33451.1|1288293_1288530_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33453.1|1288561_1289359_-	DNA adenine methylase	NA	A0A0K1LM14	Caulobacter_phage	47.2	3.0e-66
SQI33455.1|1289345_1289891_-	Uncharacterised protein	NA	A0A2I7RIF7	Vibrio_phage	32.0	2.1e-10
SQI33457.1|1290378_1290717_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33459.1|1290727_1290931_-	Uncharacterised protein	NA	A0A1U9ZAG7	Proteus_phage	44.2	9.8e-06
SQI33460.1|1291070_1291712_-	Uncharacterised protein	NA	A0A248SL66	Klebsiella_phage	32.1	7.6e-28
SQI33463.1|1291795_1292698_-	recombination associated protein	NA	A0A1W6JP69	Morganella_phage	52.2	6.4e-81
SQI33464.1|1292842_1293028_-	Carbon storage regulator homolog	NA	A0A2I7RT00	Vibrio_phage	66.7	1.1e-11
SQI33467.1|1293058_1293289_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33469.1|1293639_1294302_-	Helix-turn-helix	NA	A0A1R3Y604	Salmonella_virus	61.9	3.0e-19
SQI33471.1|1294343_1294565_+	Uncharacterized protein conserved in bacteria, prophage-related	NA	Q76H55	Enterobacteria_phage	66.2	1.2e-20
SQI33474.1|1294615_1295278_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33477.1|1295292_1295751_+	Uncharacterised protein	NA	A0A1W6JP72	Morganella_phage	58.3	3.2e-44
SQI33480.1|1295833_1296010_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33481.1|1295999_1296179_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33484.1|1296178_1297240_+	Conserved phage C-terminus (Phg_2220_C)	NA	H2DE83	Erwinia_phage	50.4	1.3e-27
SQI33486.1|1297236_1297482_+	Uncharacterised protein	NA	A0A1W6JP32	Morganella_phage	35.0	3.5e-05
SQI33488.1|1297481_1298015_+	phage N-6-adenine-methyltransferase	NA	Q9MCP3	Enterobacteria_phage	64.1	5.2e-62
SQI33490.1|1298011_1298467_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33492.1|1298463_1298646_+	restriction alleviation protein, Lar family	NA	NA	NA	NA	NA
SQI33494.1|1298638_1299043_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33498.1|1299027_1299402_+	Crossover junction endodeoxyribonuclease rusA	NA	K7PKN5	Enterobacterial_phage	54.2	6.4e-27
SQI33508.1|1299398_1299938_+	Protein of uncharacterised function (DUF968)	NA	A0A1W6JP62	Morganella_phage	65.2	4.6e-42
SQI33514.1|1299970_1300318_+	Phage antitermination protein Q	NA	A0A0P0ZCW0	Stx2-converting_phage	73.6	2.6e-46
SQI33515.1|1300342_1300828_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33517.1|1300851_1301673_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33519.1|1302385_1302697_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33520.1|1302689_1303175_+	Uncharacterised protein	NA	A0A1U9ZAE8	Proteus_phage	71.3	5.7e-60
SQI33524.1|1303176_1303632_+|lysis	Bacteriophage lysis protein	lysis	A0A1P8DTG0	Proteus_phage	57.1	1.2e-35
SQI33529.1|1304054_1304252_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33532.1|1304628_1304982_+	HNH endonuclease	NA	A0A1W6JP27	Morganella_phage	81.0	1.9e-52
SQI33533.1|1305154_1305649_+|terminase	Phage terminase, small subunit	terminase	U5P067	Shigella_phage	76.2	4.5e-68
SQI33536.1|1305645_1306353_+|terminase	Phage terminase-like protein, large subunit	terminase	Q8HAD6	Salmonella_phage	91.5	1.2e-106
SQI33538.1|1306352_1306949_+|terminase	Phage terminase-like protein, large subunit	terminase	U5P0Q5	Shigella_phage	73.2	2.1e-88
SQI33539.1|1306938_1307376_+|terminase	Phage terminase-like protein, large subunit	terminase	Q8HAD6	Salmonella_phage	81.2	7.4e-59
SQI33542.1|1307372_1307522_+	Uncharacterised protein	NA	A0A1W6JP78	Morganella_phage	66.7	1.1e-11
SQI33545.1|1307523_1307985_+|portal	phage portal protein, HK97 family	portal	A0A1W6JP33	Morganella_phage	80.7	1.5e-65
SQI33546.1|1307947_1308757_+|portal	phage portal protein, HK97 family	portal	A0A1W6JP33	Morganella_phage	87.3	1.7e-133
SQI33549.1|1308746_1309352_+|head,protease	phage prohead protease, HK97 family	head,protease	Q8SBH9	Shigella_phage	78.5	5.4e-84
SQI33552.1|1309361_1310600_+|capsid	Predicted phage phi-C31 gp36 major capsid-like protein	capsid	A0A1W6JP20	Morganella_phage	78.0	1.3e-177
SQI33555.1|1310688_1310991_+	uncharacterized phage protein (possible DNA packaging)	NA	A0A1W6JNZ5	Morganella_phage	68.0	2.2e-33
SQI33556.1|1310999_1311323_+|head,tail	Bacteriophage head-tail adaptor	head,tail	A0A1W6JP44	Morganella_phage	72.0	5.7e-40
SQI33559.1|1311315_1311762_+	phage protein, HK97 gp10 family	NA	A0A1W6JP15	Morganella_phage	66.7	1.1e-46
SQI33560.1|1311761_1312097_+	Protein of uncharacterised function (DUF3168)	NA	A0A1W6JP05	Morganella_phage	65.8	3.4e-35
SQI33562.1|1312157_1312625_+	Uncharacterised protein	NA	A0A1W6JP06	Morganella_phage	90.3	2.0e-73
SQI33564.1|1312628_1313006_+|tail	Phage tail assembly chaperone	tail	A0A1W6JP08	Morganella_phage	80.0	1.6e-49
SQI33566.1|1313017_1313308_+	Uncharacterised protein	NA	A0A1W6JP68	Morganella_phage	89.2	5.7e-39
SQI33568.1|1313328_1315299_+|tail	Phage-related minor tail protein	tail	A0A1P8DTH2	Proteus_phage	56.5	3.9e-155
SQI33569.1|1315485_1316166_+|tail	Phage-related minor tail protein	tail	A0A1W6JP49	Morganella_phage	74.4	1.9e-77
SQI33572.1|1316305_1316611_+	Uncharacterised protein	NA	A0A2H4JHR1	uncultured_Caudovirales_phage	50.0	6.6e-14
SQI33575.1|1316612_1316873_+	Phage-related protein	NA	K7P7R1	Enterobacteria_phage	61.4	4.9e-26
SQI33576.1|1316945_1317206_+|tail	phage minor tail protein L	tail	A0A1P8DTI3	Proteus_phage	61.9	3.9e-23
SQI33580.1|1317238_1317688_+|tail	phage minor tail protein L	tail	K7P6W4	Enterobacteria_phage	57.7	5.5e-49
SQI33583.1|1317684_1318395_+	NlpC/P60 family	NA	F1C573	Cronobacter_phage	65.6	1.2e-87
SQI33585.1|1318391_1318997_+|tail	Phage-related protein, tail component	tail	F1C572	Cronobacter_phage	59.6	6.3e-56
SQI33587.1|1319052_1320243_+	Uncharacterised protein	NA	F1C571	Cronobacter_phage	63.6	1.1e-147
SQI33590.1|1320199_1322014_+	Fibronectin type III domain	NA	A0A1P8DTI4	Proteus_phage	49.9	3.7e-168
SQI33592.1|1322054_1322717_+	Fibronectin type III protein	NA	A0A2P0ZZ91	Klebsiella_phage	40.7	7.4e-18
SQI33593.1|1323003_1323096_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33595.1|1323034_1323259_+|tail	Prophage tail fibre N-terminal	tail	NA	NA	NA	NA
SQI33596.1|1323529_1323670_+	Uncharacterised protein	NA	Q8W610	Enterobacteria_phage	75.0	2.6e-10
SQI33599.1|1323881_1324061_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33600.1|1324064_1324553_+	death-on-curing family protein	NA	NA	NA	NA	NA
SQI33603.1|1324586_1324868_-	DNA-damage-inducible protein I	NA	A0A1W6JP10	Morganella_phage	44.6	1.2e-12
SQI33610.1|1325492_1325813_+|protease	ATP-dependent Clp protease adapter protein ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	51.2	1.3e-15
SQI33614.1|1325844_1328130_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.9	6.5e-170
SQI33616.1|1328197_1328416_-	Translation initiation factor IF-1	NA	NA	NA	NA	NA
SQI33619.1|1328555_1329278_-|tRNA	Leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
SQI33622.1|1329286_1330168_-	Lipid A export ATP-binding/permease protein MsbA	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.5	1.2e-23
SQI33625.1|1330154_1331030_-	Probable ABC transporter ATP-binding protein HI_0664	NA	NA	NA	NA	NA
SQI33626.1|1331032_1332799_-	ATP-binding/permease protein CydD	NA	F2Y302	Organic_Lake_phycodnavirus	29.9	2.7e-14
SQI33630.1|1333118_1334804_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI33631.1|1334989_1335952_-	Thioredoxin reductase	NA	A0A2I2L5E1	Orpheovirus	46.4	6.2e-66
SQI33634.1|1336488_1336983_+	Leucine-responsive regulatory protein	NA	NA	NA	NA	NA
SQI33637.1|1337395_1339591_+	DNA translocase FtsK	NA	NA	NA	NA	NA
SQI33639.1|1339577_1340072_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	49.6	2.4e-29
SQI33642.1|1340068_1341055_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	50.6	1.4e-52
SQI33644.1|1341141_1341762_+	P20	NA	NA	NA	NA	NA
SQI33646.1|1341786_1343130_+	Replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.3	4.3e-81
SQI33649.1|1343235_1344528_+|tRNA	Serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.7	2.3e-95
>prophage 6
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	1685441	1719465	4042926	tail	Proteus_phage(25.0%)	67	NA	NA
SQI34664.1|1685441_1686725_-	Integrase	NA	Q8W658	Enterobacteria_phage	46.6	9.7e-115
SQI34665.1|1686732_1686969_-	Putative excisionase (DUF1233)	NA	S4TND0	Salmonella_phage	59.7	1.8e-22
SQI34666.1|1687172_1687379_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34667.1|1687356_1687749_-	Protein of uncharacterised function (DUF2591)	NA	A0A1P8DTH6	Proteus_phage	44.5	4.2e-13
SQI34668.1|1687752_1687947_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34669.1|1687963_1688119_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34670.1|1688275_1688497_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34671.1|1688522_1688786_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34672.1|1688820_1689459_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34673.1|1689545_1690061_-	Uncharacterised protein	NA	R9VWB9	Serratia_phage	28.7	8.6e-14
SQI34674.1|1690182_1690434_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34675.1|1690793_1691348_-	Uncharacterised protein	NA	A0A2I7QTL0	Vibrio_phage	39.5	1.4e-30
SQI34676.1|1691360_1691831_-	Helix-destabilizing protein	NA	C6ZR36	Salmonella_phage	59.9	1.3e-45
SQI34689.1|1691831_1692704_-	phage nucleotide-binding protein	NA	A0A1B1P9H8	Acinetobacter_phage	52.0	7.1e-61
SQI34692.1|1692719_1693031_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34694.1|1693027_1693180_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34696.1|1693189_1693366_-	Uncharacterised protein	NA	A0A1P8DTG5	Proteus_phage	54.4	1.2e-07
SQI34766.1|1693307_1693490_-	Uncharacterised protein	NA	A0A1P8DTH8	Proteus_phage	73.3	5.0e-17
SQI34769.1|1693569_1693902_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34770.1|1693903_1694077_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34790.1|1694106_1694376_-	Uncharacterised protein	NA	A0A2I7RQ39	Vibrio_phage	48.5	2.5e-12
SQI34793.1|1694449_1694581_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34794.1|1694651_1694960_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34796.1|1695337_1696078_-	HIRAN domain	NA	NA	NA	NA	NA
SQI34797.1|1696087_1697005_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34801.1|1697080_1697761_-	Uncharacterized HTH-type transcriptional regulator CBU_1416	NA	K7P850	Enterobacteria_phage	59.5	2.1e-60
SQI34802.1|1697840_1698068_+	Uncharacterised protein	NA	G9L677	Escherichia_phage	70.7	1.4e-24
SQI34803.1|1698176_1698503_+	Uncharacterised protein	NA	A0A1W6JNY4	Morganella_phage	75.0	7.5e-40
SQI34804.1|1698527_1699322_+	ParB/RepB/Spo0J family partition protein	NA	A0A2H4J902	uncultured_Caudovirales_phage	74.5	2.1e-96
SQI34805.1|1699318_1700260_+	phage replication protein O, N-terminal domain	NA	A0A1P8DTG2	Proteus_phage	87.5	7.1e-115
SQI34806.1|1700256_1700931_+	Replication protein P	NA	A0A1P8DTF3	Proteus_phage	55.6	3.7e-65
SQI34807.1|1700956_1701166_+	restriction alleviation protein, Lar family	NA	NA	NA	NA	NA
SQI34808.1|1701165_1701423_+	Protein of uncharacterised function (DUF551)	NA	NA	NA	NA	NA
SQI34809.1|1701422_1701701_+	Uncharacterised protein	NA	A0A1U9ZAA1	Proteus_phage	48.8	2.8e-19
SQI34810.1|1701697_1701883_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34811.1|1701900_1702122_+	Uncharacterised protein	NA	A0A1P8DTG8	Proteus_phage	60.6	1.8e-13
SQI34812.1|1702135_1702570_+	Protein of uncharacterised function (DUF1367)	NA	A0A096XEN2	Escherichia_phage	66.2	2.3e-52
SQI34813.1|1702636_1703230_+	Bacteriophage Lambda NinG protein	NA	A0A1P8DTE0	Proteus_phage	76.9	1.3e-74
SQI34814.1|1703219_1703420_+	Phage NinH protein	NA	NA	NA	NA	NA
SQI34815.1|1703416_1704016_+	Protein of uncharacterised function (DUF1133)	NA	A0A1V0E5R2	Salmonella_phage	44.7	2.5e-41
SQI34816.1|1704592_1704910_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34817.1|1705499_1705859_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34818.1|1705863_1706220_+	Peptidase M15	NA	A0A0G2SSI0	Proteus_phage	63.2	9.4e-36
SQI34822.1|1706204_1706423_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34823.1|1706455_1706761_+	Uncharacterised protein	NA	A0A1W6JNV7	Morganella_phage	61.5	7.6e-10
SQI34824.1|1706776_1706968_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34825.1|1707061_1707181_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34826.1|1707764_1708376_+	KilA-N domain	NA	K7PH30	Enterobacteria_phage	36.4	9.2e-31
SQI34827.1|1708380_1708548_+	Uncharacterised protein	NA	I6S1R0	Salmonella_phage	69.0	4.6e-09
SQI34828.1|1708528_1708885_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34829.1|1709068_1709251_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34830.1|1709530_1710133_+	Uncharacterised protein	NA	A0A077KBY7	Edwardsiella_phage	77.9	3.0e-74
SQI34831.1|1710135_1711623_+	Uncharacterised protein	NA	A0A1W6JNY3	Morganella_phage	87.6	6.1e-262
SQI34832.1|1711622_1712993_+	Uncharacterised protein	NA	A0A1B0VMH0	Pseudomonas_phage	49.4	2.2e-120
SQI34833.1|1712989_1714111_+	Phage Mu protein F like protein	NA	I6PD76	Cronobacter_phage	51.6	1.2e-105
SQI34849.1|1714223_1715000_+	Uncharacterised protein	NA	A0A1B0VMG1	Pseudomonas_phage	59.3	7.8e-67
SQI34868.1|1715013_1715967_+	Uncharacterised protein	NA	A0A1B0VMF8	Pseudomonas_phage	71.2	3.4e-125
SQI34875.1|1716101_1716257_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34877.1|1716303_1716783_+	Uncharacterised protein	NA	G8C7P9	Escherichia_phage	47.7	8.5e-32
SQI34881.1|1716785_1717139_+	Uncharacterised protein	NA	I6PD77	Cronobacter_phage	44.7	1.9e-20
SQI34884.1|1717140_1717269_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34889.1|1717252_1717723_+	Uncharacterised protein	NA	G8C7Q1	Escherichia_phage	56.7	2.0e-41
SQI34892.1|1717719_1718121_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34895.1|1718169_1718823_+|tail	Phage tail protein	tail	G8C7Q3	Escherichia_phage	56.0	1.7e-59
SQI34898.1|1718993_1719164_+	Domain of uncharacterised function (DUF1789)	NA	NA	NA	NA	NA
SQI34900.1|1719193_1719325_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34903.1|1719327_1719465_+	Uncharacterised protein	NA	A0A1P8DUR1	Escherichia_phage	50.0	4.3e-05
>prophage 7
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	1728035	1739446	4042926	tail	Cronobacter_phage(66.67%)	10	NA	NA
SQI34945.1|1728035_1731041_+|tail	Phage-related minor tail protein	tail	K7PMB9	Enterobacterial_phage	34.4	2.9e-117
SQI34968.1|1731079_1731424_+	Phage-related protein	NA	I6PBN7	Cronobacter_phage	46.4	1.8e-23
SQI34969.1|1731420_1732164_+|tail	phage minor tail protein L	tail	F1C574	Cronobacter_phage	58.2	3.5e-85
SQI34971.1|1732160_1732871_+	NlpC/P60 family	NA	F1C573	Cronobacter_phage	63.9	6.4e-84
SQI34975.1|1732867_1733470_+|tail	Phage-related protein, tail component	tail	F1C572	Cronobacter_phage	62.1	2.7e-59
SQI34978.1|1733526_1734168_+	Uncharacterised protein	NA	F1C571	Cronobacter_phage	60.6	1.6e-65
SQI34980.1|1734175_1735063_+	Uncharacterised protein	NA	F1C571	Cronobacter_phage	64.3	7.4e-106
SQI34984.1|1735010_1736831_+	Domain of uncharacterised function (DUF1983)	NA	A0A1P8DTI4	Proteus_phage	53.4	2.7e-187
SQI34985.1|1736827_1737844_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI34988.1|1737904_1739446_+	Uncharacterised protein	NA	A0A1W6JNW0	Morganella_phage	34.2	1.7e-65
>prophage 8
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	2194862	2223594	4042926	tail,head	Enterobacter_phage(25.93%)	41	NA	NA
SQI37484.1|2194862_2196092_-	Uncharacterised protein	NA	G9L6D4	Escherichia_phage	46.0	2.6e-101
SQI37492.1|2196111_2196483_-	Uncharacterised protein	NA	A0A1E1GEP2	Vibrio_phage	52.8	2.3e-21
SQI37494.1|2196590_2196761_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37496.1|2196760_2198230_-	Uncharacterised protein	NA	A0A2I7R904	Vibrio_phage	31.4	8.1e-57
SQI37498.1|2198232_2199711_-	Uncharacterised protein	NA	A0A2I7RZ61	Vibrio_phage	30.8	4.2e-37
SQI37500.1|2199715_2200522_-	Uncharacterised protein	NA	A0A193GYI3	Enterobacter_phage	51.5	2.2e-64
SQI37502.1|2200518_2200974_-	Uncharacterised protein	NA	A0A193GYI3	Enterobacter_phage	48.6	3.9e-26
SQI37505.1|2200986_2201562_-	Uncharacterised protein	NA	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	59.3	1.7e-47
SQI37507.1|2201561_2202032_-	Uncharacterised protein	NA	G9L6D1	Escherichia_phage	58.9	9.8e-49
SQI37510.1|2202033_2204490_-	Uncharacterised protein	NA	Q858G3	Salmonella_phage	69.2	0.0e+00
SQI37511.1|2204489_2204804_-	Uncharacterised protein	NA	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	59.1	2.5e-24
SQI37514.1|2205096_2205408_-	Uncharacterised protein	NA	A0A193GYH8	Enterobacter_phage	44.9	3.6e-15
SQI37517.1|2205620_2205800_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37518.1|2205808_2206240_-	Uncharacterised protein	NA	A0A193GYT9	Enterobacter_phage	52.1	6.7e-28
SQI37521.1|2206297_2207281_-	Uncharacterised protein	NA	G9L6C5	Escherichia_phage	63.2	4.6e-117
SQI37524.1|2207298_2207970_-	Uncharacterised protein	NA	A0A193GYS7	Enterobacter_phage	63.5	1.2e-44
SQI37526.1|2207966_2208290_-	Uncharacterised protein	NA	Q2A090	Sodalis_phage	54.9	3.3e-19
SQI37528.1|2208286_2209939_-|head,tail	Bacteriophage head to tail connecting protein	head,tail	A0A193GYI4	Enterobacter_phage	68.1	6.5e-204
SQI37531.1|2209954_2210170_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37532.1|2210355_2211837_-	Uncharacterised protein	NA	A0A0F6TK57	Escherichia_coli_O157_typing_phage	76.7	1.1e-231
SQI37535.1|2211833_2212394_-	Terminase small subunit	NA	G9L6B7	Escherichia_phage	47.1	3.8e-39
SQI37536.1|2212438_2213038_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37539.1|2213067_2213409_-	Uncharacterised protein	NA	H9C172	Pectobacterium_phage	61.0	1.4e-33
SQI37540.1|2213481_2214141_-	Uncharacterised protein	NA	Q1MVG0	Enterobacteria_phage	61.0	5.4e-77
SQI37542.1|2214219_2214432_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37544.1|2214610_2214844_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37545.1|2214847_2215255_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37549.1|2215357_2215522_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37555.1|2215602_2215965_-	Holliday junction resolvase	NA	G8C7V6	Escherichia_phage	66.7	1.4e-39
SQI37556.1|2215961_2216381_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37559.1|2216603_2217251_-	Replication protein P	NA	NA	NA	NA	NA
SQI37562.1|2217319_2218000_-	Primosomal protein I	NA	A0A193GZ86	Enterobacter_phage	56.9	2.3e-59
SQI37563.1|2218021_2218225_-	Uncharacterised protein	NA	R9UB09	Vibrio_phage	52.0	9.5e-09
SQI37566.1|2218729_2219329_+	Helix-turn-helix	NA	Q858D7	Salmonella_phage	29.3	1.0e-18
SQI37573.1|2219659_2219818_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37575.1|2219795_2221223_+	Exodeoxyribonuclease 8	NA	K7P6V4	Enterobacteria_phage	44.4	7.0e-98
SQI37577.1|2221278_2222340_+	RecT family	NA	H6WRX0	Salmonella_phage	49.5	1.7e-96
SQI37584.1|2222377_2222662_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37586.1|2222700_2223039_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37587.1|2223079_2223304_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37589.1|2223306_2223594_+	Uncharacterised protein	NA	A0A1B0UY37	Roseobacter_phage	43.0	8.2e-14
>prophage 9
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	2291516	2325098	4042926	protease,portal,capsid,terminase	Morganella_phage(63.64%)	43	NA	NA
SQI37874.1|2291516_2292893_+|protease	Uncharacterized protease yhbU precursor	protease	Q6DW11	Phage_TP	83.0	1.9e-180
SQI37876.1|2293229_2294027_-	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
SQI37878.1|2294480_2295056_+	Lipid A palmitoyltransferase PagP precursor	NA	NA	NA	NA	NA
SQI37879.1|2295159_2296524_-	Phenylalanine-specific permease	NA	NA	NA	NA	NA
SQI37880.1|2297100_2297484_+	Regulatory protein soxS	NA	NA	NA	NA	NA
SQI37881.1|2297644_2298454_+	Phosphatase YidA	NA	NA	NA	NA	NA
SQI37884.1|2298675_2300007_+	LIV-II	NA	NA	NA	NA	NA
SQI37885.1|2300047_2301004_-	D-malate degradation protein R	NA	NA	NA	NA	NA
SQI37888.1|2301096_2301555_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQI37890.1|2301559_2302021_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQI37893.1|2302022_2302907_-	Aromatic amino acid exporter YddG	NA	NA	NA	NA	NA
SQI37895.1|2303082_2304540_-	Na+/alanine symporter	NA	NA	NA	NA	NA
SQI37896.1|2305197_2305446_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37898.1|2305733_2306105_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37900.1|2306451_2306805_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37901.1|2306863_2307373_-	Domain of Uncharacterised Function (DUF1543)	NA	NA	NA	NA	NA
SQI37903.1|2307652_2308816_+	Histidinol-phosphate aminotransferase	NA	A0A142C026	Faustovirus	28.7	5.7e-13
SQI37905.1|2308858_2309203_-	Protein of uncharacterised function, DUF486	NA	NA	NA	NA	NA
SQI37906.1|2309433_2310006_+	3-demethylubiquinone-9 3-methyltransferase	NA	NA	NA	NA	NA
SQI37908.1|2309987_2310212_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37912.1|2310263_2310659_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37923.1|2310823_2311204_-	Inner membrane protein ydgC	NA	NA	NA	NA	NA
SQI37925.1|2311628_2312213_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37928.1|2312277_2312667_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37931.1|2313391_2313514_+	Inner membrane protein yhaI	NA	NA	NA	NA	NA
SQI37934.1|2313513_2313771_+	Inner membrane protein yhaI	NA	NA	NA	NA	NA
SQI37936.1|2313857_2314268_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37938.1|2314243_2314615_-	lipoprotein	NA	NA	NA	NA	NA
SQI37941.1|2315091_2315541_-	Argininosuccinate synthase	NA	NA	NA	NA	NA
SQI37942.1|2316257_2316875_+	nicotinamidase/pyrazinamidase	NA	NA	NA	NA	NA
SQI37947.1|2317048_2317867_-|capsid	Predicted phage phi-C31 gp36 major capsid-like protein	capsid	A0A1W6JP20	Morganella_phage	62.8	5.5e-63
SQI37948.1|2317982_2319206_-|portal	phage portal protein, HK97 family	portal	A0A1W6JP33	Morganella_phage	87.3	5.4e-208
SQI37949.1|2319195_2319357_-	Uncharacterised protein	NA	A0A1W6JP78	Morganella_phage	71.7	3.2e-15
SQI37950.1|2319353_2320145_-|terminase	Phage terminase-like protein, large subunit	terminase	A0A1W6JP18	Morganella_phage	83.3	4.1e-132
SQI37951.1|2320281_2321043_-|terminase	Phage terminase-like protein, large subunit	terminase	A0A1P8DTK0	Proteus_phage	92.6	3.1e-129
SQI37952.1|2321065_2321356_-|terminase	Phage terminase, small subunit	terminase	A0A1P8DTK5	Proteus_phage	75.0	5.0e-35
SQI37953.1|2321695_2322049_-	HNH endonuclease	NA	A0A1W6JP27	Morganella_phage	82.8	4.5e-54
SQI37954.1|2322474_2322903_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37955.1|2323236_2323467_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37956.1|2323447_2323693_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37957.1|2323908_2324286_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37958.1|2324344_2324914_-	Phage-related lysozyme (muraminidase)	NA	A0A1W6JNW4	Morganella_phage	62.7	4.7e-53
SQI37959.1|2324894_2325098_-	Uncharacterised protein	NA	A0A1W6JNY9	Morganella_phage	73.3	1.0e-18
>prophage 10
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	2329059	2376139	4042926	tail,integrase	Cronobacter_phage(18.75%)	73	2325840:2325855	2382214:2382229
2325840:2325855	attL	CATTTATGATAAAAAT	NA	NA	NA	NA
SQI37967.1|2329059_2329767_-	Antitermination protein	NA	F1C595	Cronobacter_phage	48.7	1.1e-56
SQI37968.1|2329884_2330322_-	Protein of uncharacterised function (DUF968)	NA	A0A1W6JP62	Morganella_phage	64.0	2.7e-24
SQI37969.1|2330335_2330713_-	Crossover junction endodeoxyribonuclease rusA	NA	A5LH74	Enterobacteria_phage	52.3	1.3e-30
SQI37970.1|2330709_2330943_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37971.1|2331140_2331548_-	Uncharacterised protein	NA	U5P0A0	Shigella_phage	48.1	5.9e-26
SQI37972.1|2331724_2331826_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI37973.1|2332018_2332261_+	Excisionase-like protein	NA	NA	NA	NA	NA
SQI37974.1|2332241_2333369_+	Site-specific recombinase XerC	NA	O21925	Phage_21	62.0	2.1e-129
SQI37975.1|2333365_2333530_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38033.1|2333875_2334652_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38036.1|2334825_2334978_-	Isocitrate dehydrogenase [NADP]	NA	Q77Z09	Phage_21	92.0	7.6e-19
SQI38037.1|2335132_2336650_-	Uncharacterised protein	NA	A0A1S6KUV1	Providencia_phage	33.9	1.8e-35
SQI38038.1|2336715_2337732_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38039.1|2337728_2341034_-	Domain of uncharacterised function (DUF1983)	NA	A0A1P8DTI4	Proteus_phage	53.0	0.0e+00
SQI38040.1|2341089_2341692_-|tail	Phage-related protein, tail component	tail	F1C572	Cronobacter_phage	62.1	5.1e-58
SQI38041.1|2341688_2342399_-	NlpC/P60 family	NA	F1C573	Cronobacter_phage	65.2	2.0e-85
SQI38042.1|2342395_2343139_-|tail	phage minor tail protein L	tail	F1C574	Cronobacter_phage	58.0	1.2e-85
SQI38043.1|2343135_2343480_-	Phage-related protein	NA	I6PBN7	Cronobacter_phage	46.4	1.8e-23
SQI38044.1|2343518_2346455_-|tail	Phage-related minor tail protein	tail	K7PMB9	Enterobacterial_phage	35.1	2.2e-130
SQI38045.1|2346516_2347095_-	Uncharacterised protein	NA	I6PDJ9	Cronobacter_phage	58.9	4.3e-22
SQI38046.1|2347182_2347455_-	Uncharacterised protein	NA	K4FJF8	Escherichia_phage	46.3	1.0e-10
SQI38047.1|2347484_2347640_-	Domain of uncharacterised function (DUF1789)	NA	NA	NA	NA	NA
SQI38048.1|2347587_2347788_-	Domain of uncharacterised function (DUF1789)	NA	NA	NA	NA	NA
SQI38049.1|2347824_2348478_-|tail	Phage tail protein	tail	G8C7Q3	Escherichia_phage	56.4	2.0e-60
SQI38050.1|2348526_2348928_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38051.1|2348924_2349074_-	Uncharacterised protein	NA	I6PCW1	Cronobacter_phage	57.1	2.2e-10
SQI38052.1|2349048_2349492_-	Uncharacterised protein	NA	G8C7Q1	Escherichia_phage	49.3	2.1e-32
SQI38053.1|2349508_2349862_-	Uncharacterised protein	NA	I6PD77	Cronobacter_phage	43.0	5.5e-20
SQI38054.1|2349864_2350347_-	Uncharacterised protein	NA	G8C7P9	Escherichia_phage	48.0	4.3e-31
SQI38055.1|2350385_2351345_-	Uncharacterised protein	NA	A0A1B0VMF8	Pseudomonas_phage	73.0	2.2e-132
SQI38056.1|2351357_2352134_-	Uncharacterised protein	NA	A0A1B0VMG1	Pseudomonas_phage	55.8	1.1e-60
SQI38058.1|2352249_2353371_-	Uncharacterised protein	NA	I6PD76	Cronobacter_phage	49.2	1.1e-98
SQI38060.1|2353367_2354738_-	Uncharacterised protein	NA	A0A1B0VMH0	Pseudomonas_phage	48.9	8.7e-122
SQI38062.1|2354737_2355664_-	Uncharacterized conserved protein	NA	A0A2P1MXD8	Escherichia_phage	55.6	7.0e-91
SQI38064.1|2355707_2356043_-	Terminase-like family	NA	A0A1B1P9C9	Acinetobacter_phage	70.8	3.7e-42
SQI38066.1|2356042_2357011_-	Terminase small subunit	NA	C5IHM0	Burkholderia_virus	38.2	9.1e-33
SQI38068.1|2357072_2357642_-	Uncharacterised protein	NA	K7PHH7	Enterobacteria_phage	53.6	7.3e-30
SQI38070.1|2357613_2358096_-	Uncharacterised protein	NA	A0A1U9ZAE8	Proteus_phage	76.9	3.7e-67
SQI38072.1|2358092_2358461_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38076.1|2358460_2358874_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38078.1|2358958_2359189_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38080.1|2359607_2359931_-	Protein of uncharacterised function (DUF1133)	NA	A0A0U2S606	Escherichia_phage	51.2	2.2e-15
SQI38082.1|2359965_2360280_-	Protein of uncharacterised function (DUF968)	NA	A0A1I9KFA7	Aeromonas_phage	67.7	1.9e-32
SQI38084.1|2360291_2361155_-	PUA domain (predicted RNA-binding domain)	NA	A0A2H4J5Y9	uncultured_Caudovirales_phage	48.6	5.4e-85
SQI38085.1|2361169_2361763_-	Protein of uncharacterised function (DUF1367)	NA	H9C173	Pectobacterium_phage	59.2	9.5e-65
SQI38087.1|2361988_2362321_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38089.1|2362367_2362640_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38093.1|2362667_2363009_-	Uncharacterised protein	NA	H9C172	Pectobacterium_phage	61.1	6.5e-34
SQI38098.1|2363036_2363207_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38100.1|2363320_2363557_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38103.1|2363559_2363733_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38105.1|2363753_2365124_-	Replicative DNA helicase	NA	Q76H51	Enterobacteria_phage	46.0	3.6e-99
SQI38107.1|2365120_2365711_-	DNA replication protein dnaC	NA	K7PLU3	Enterobacteria_phage	47.6	1.4e-44
SQI38110.1|2365703_2366555_-	Uncharacterised protein	NA	Q8W642	Enterobacteria_phage	62.7	1.4e-32
SQI38113.1|2366556_2366781_-	Uncharacterised protein	NA	H9C163	Pectobacterium_phage	55.4	1.2e-15
SQI38116.1|2366798_2367254_-	Protein of uncharacterised function (DUF1019)	NA	H9C162	Pectobacterium_phage	50.7	9.2e-28
SQI38120.1|2367301_2367550_-	Helix-turn-helix	NA	NA	NA	NA	NA
SQI38122.1|2367653_2368406_+	Plasmid maintenance system antidote protein	NA	A0A0M3LPF9	Mannheimia_phage	36.4	7.6e-27
SQI38124.1|2368870_2369203_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38126.1|2369215_2370571_+	exonuclease VIII	NA	H9C157	Pectobacterium_phage	31.9	1.5e-52
SQI38129.1|2370551_2371223_+	Uncharacterised protein	NA	H9C157	Pectobacterium_phage	58.9	3.4e-63
SQI38131.1|2371222_2371723_+	Siphovirus Gp157	NA	H9C156	Pectobacterium_phage	58.9	4.3e-42
SQI38132.1|2371767_2371947_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38135.1|2371972_2372203_+	Uncharacterised protein	NA	A0A2H4JCC5	uncultured_Caudovirales_phage	59.7	2.7e-12
SQI38136.1|2372199_2372793_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38137.1|2372786_2372954_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38138.1|2372953_2373124_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38139.1|2373196_2373403_+	Uncharacterised protein	NA	H9C154	Pectobacterium_phage	46.7	5.9e-06
SQI38140.1|2373402_2373654_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38141.1|2373628_2374321_+|integrase	Bacteriophage lambda integrase, N-terminal domain	integrase	Q77Z04	Phage_21	69.1	1.4e-67
SQI38142.1|2374283_2374763_+|integrase	Phage integrase family	integrase	O21925	Phage_21	78.0	3.5e-70
SQI38143.1|2374741_2374933_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38144.1|2374885_2376139_-	Isocitrate dehydrogenase [NADP]	NA	Q77Z09	Phage_21	90.7	6.7e-20
2382214:2382229	attR	CATTTATGATAAAAAT	NA	NA	NA	NA
>prophage 11
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	2489960	2494487	4042926		Escherichia_phage(100.0%)	6	NA	NA
SQI38256.1|2489960_2491613_+	Dimethyl sulfoxide reductase DmsA precursor	NA	A0A077SK27	Escherichia_phage	54.1	1.7e-159
SQI38257.1|2491569_2492391_+	Dimethyl sulfoxide reductase DmsA precursor	NA	A0A077SK27	Escherichia_phage	55.1	1.8e-90
SQI38258.1|2492402_2492537_+	DMSO reductase iron-sulfur subunit	NA	A0A077SL61	Escherichia_phage	81.4	3.1e-16
SQI38259.1|2492523_2493021_+	DMSO reductase iron-sulfur subunit	NA	A0A077SL61	Escherichia_phage	64.6	6.7e-64
SQI38260.1|2493022_2493799_+	DMSO reductase anchor subunit	NA	A0A077SK59	Escherichia_phage	39.6	1.3e-37
SQI38261.1|2493887_2494487_+	Twin-arginine leader-binding protein DmsD	NA	A0A077SLS7	Escherichia_phage	48.7	2.7e-43
>prophage 12
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	2508954	2548096	4042926	head,terminase,lysis	Bacteriophage(20.0%)	52	NA	NA
SQI38283.1|2508954_2509200_+	DinI-like family	NA	Q6K1F1	Salmonella_virus	32.5	1.4e-06
SQI38290.1|2509196_2509505_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38293.1|2509627_2511166_+	Putative phosphoethanolamine transferase ybiP	NA	NA	NA	NA	NA
SQI38295.1|2511196_2512495_-	Uncharacterised protein	NA	A0A0H3UDV7	Escherichia_phage	37.7	1.4e-28
SQI38298.1|2512500_2513160_-	Protein of uncharacterised function (DUF2612)	NA	Q6IWQ4	Burkholderia_phage	40.7	4.0e-40
SQI38301.1|2513156_2514344_-	Uncharacterized homolog of phage Mu protein gp47	NA	A0A2H5BG53	Pseudoalteromonas_phage	38.9	5.1e-78
SQI38304.1|2514336_2514681_-	Uncharacterised protein	NA	Q6IWQ2	Burkholderia_phage	33.9	1.6e-11
SQI38305.1|2514677_2515370_-	Uncharacterised protein	NA	A0A2H4P6V3	Pseudomonas_phage	39.4	6.1e-31
SQI38308.1|2515412_2516228_-	Uncharacterised protein	NA	Q6IWQ0	Burkholderia_phage	38.6	2.8e-43
SQI38312.1|2516220_2516514_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38314.1|2516516_2517044_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38317.1|2517040_2519173_-	Uncharacterised protein	NA	A0A2H5BG44	Pseudoalteromonas_phage	24.1	3.5e-16
SQI38319.1|2519255_2519714_-	Uncharacterised protein	NA	Q6IWV4	Burkholderia_phage	50.3	1.9e-25
SQI38321.1|2519763_2520216_-	Uncharacterised protein	NA	I7ATP4	Escherichia_phage	38.9	8.0e-24
SQI38322.1|2520226_2521489_-	Protein of uncharacterised function (DUF3383)	NA	A0A088C3U1	Shewanella_sp._phage	35.6	3.2e-62
SQI38325.1|2521485_2521713_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38330.1|2521722_2522238_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38331.1|2522325_2522598_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38332.1|2522597_2523056_-	Uncharacterised protein	NA	A0A2H4J488	uncultured_Caudovirales_phage	35.6	7.4e-09
SQI38333.1|2523055_2523490_-	Uncharacterised protein	NA	Q6IWU8	Burkholderia_phage	34.5	2.0e-11
SQI38334.1|2523489_2523831_-	Uncharacterised protein	NA	Q6IWU7	Burkholderia_phage	35.8	2.1e-08
SQI38335.1|2523886_2524954_-	Uncharacterized protein conserved in bacteria	NA	A0A088C493	Shewanella_sp._phage	39.6	7.9e-54
SQI38336.1|2524953_2525451_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38337.1|2525450_2526707_-	Uncharacterized protein conserved in bacteria	NA	A0A2H5BG39	Pseudoalteromonas_phage	45.6	2.7e-37
SQI38338.1|2526703_2527417_-|head	phage head morphogenesis protein, SPP1 gp7 family	head	A0A088C492	Shewanella_sp._phage	38.7	9.1e-38
SQI38339.1|2527439_2528957_-	phage-associated protein, HI1409 family	NA	A0A2H4P6S9	Pseudomonas_phage	45.3	4.8e-105
SQI38340.1|2528961_2530197_-|terminase	phage terminase, large subunit, PBSX family	terminase	A0A1V0E5Q3	Salmonella_phage	72.2	1.2e-178
SQI38341.1|2530189_2530741_-	Terminase small subunit	NA	A0A2H4J480	uncultured_Caudovirales_phage	62.5	6.7e-57
SQI38342.1|2530818_2531280_-|lysis	Bacteriophage lysis protein	lysis	A0A2H4JHL8	uncultured_Caudovirales_phage	42.6	2.9e-13
SQI38343.1|2531288_2531462_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38344.1|2531443_2531914_-	Phage-related lysozyme (muraminidase)	NA	A0A1W6JNW4	Morganella_phage	57.2	1.9e-47
SQI38345.1|2531913_2532183_-	Uncharacterised protein	NA	A0A2H4FNF0	Salmonella_phage	65.6	1.3e-24
SQI38346.1|2532380_2532497_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38347.1|2532503_2532968_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38350.1|2533004_2533325_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38353.1|2533654_2534086_-	Phage antitermination protein Q	NA	K7PGW2	Enterobacterial_phage	42.1	9.1e-17
SQI38354.1|2534349_2536608_-	Predicted P-loop ATPase and inactivated derivatives	NA	Q9T1U5	Acyrthosiphon_pisum_secondary_endosymbiont_phage	70.9	0.0e+00
SQI38356.1|2536611_2536812_-	Uncharacterised protein	NA	K7ST61	Bacteriophage	46.6	1.8e-07
SQI38361.1|2536949_2537624_+	Uncharacterized HTH-type transcriptional regulator CBU_1416	NA	B6SCU0	Bacteriophage	50.2	6.7e-59
SQI38364.1|2537990_2538482_-	Uncharacterised protein	NA	K7P861	Enterobacteria_phage	43.0	6.3e-30
SQI38367.1|2538810_2539431_+	Uncharacterised protein	NA	K7PKU5	Enterobacteria_phage	46.6	1.1e-42
SQI38369.1|2539459_2539594_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38371.1|2539603_2540359_+	Uncharacterised protein	NA	Q3LZP9	Bacteriophage	39.4	4.0e-28
SQI38382.1|2540359_2541646_+	Protein of uncharacterised function (DUF2800)	NA	B6SCX9	Bacteriophage	63.4	1.9e-155
SQI38383.1|2541661_2542213_+	Protein of uncharacterised function (DUF2815)	NA	Q3LZQ2	Bacteriophage	69.4	1.8e-65
SQI38389.1|2542204_2542771_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38392.1|2542793_2544851_+	DNA polymerase I, thermostable	NA	Q775A3	Bordetella_phage	65.2	6.5e-262
SQI38395.1|2544922_2545114_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38396.1|2545220_2545448_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38400.1|2545431_2545701_+	VRR-NUC domain	NA	Q3LZN4	Bacteriophage	76.4	6.6e-34
SQI38410.1|2545753_2546611_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI38424.1|2546704_2548096_+	SNF2 family N-terminal domain	NA	Q3LZN8	Bacteriophage	79.3	3.3e-225
>prophage 13
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	2791819	2804588	4042926	tail	Cronobacter_phage(44.44%)	14	NA	NA
SQI39249.1|2791819_2792302_+	Small protein B	NA	W5RAM5	Staphylococcus_phage	46.8	1.8e-29
SQI39250.1|2793148_2793361_+	Helix-turn-helix domain	NA	NA	NA	NA	NA
SQI39251.1|2793783_2794053_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39252.1|2794119_2794359_-	Helix-turn-helix	NA	A0A1W6JNW5	Morganella_phage	37.3	5.8e-05
SQI39253.1|2794591_2794891_+	10K-L protein	NA	NA	NA	NA	NA
SQI39254.1|2795218_2798881_-	Fibronectin type III protein	NA	A0A1P8DTI4	Proteus_phage	50.6	0.0e+00
SQI39255.1|2798941_2799547_-|tail	Phage-related protein, tail component	tail	F1C572	Cronobacter_phage	62.0	3.9e-58
SQI39256.1|2799543_2800254_-	NlpC/P60 family	NA	F1C573	Cronobacter_phage	64.8	5.8e-85
SQI39257.1|2800250_2800994_-|tail	phage minor tail protein L	tail	F1C574	Cronobacter_phage	57.8	2.3e-84
SQI39258.1|2800990_2801335_-	Phage-related protein	NA	E4WL34	Enterobacteria_phage	39.8	5.9e-19
SQI39259.1|2801397_2801610_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39260.1|2801642_2804069_-|tail	Phage-related minor tail protein	tail	K7PMB9	Enterobacterial_phage	34.7	5.7e-116
SQI39261.1|2804086_2804230_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39262.1|2804246_2804588_-	Uncharacterised protein	NA	I6PCW3	Cronobacter_phage	38.7	5.7e-14
>prophage 14
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	2808468	2824565	4042926	tail,lysis	Morganella_phage(23.53%)	23	NA	NA
SQI39268.1|2808468_2809731_-	DNA polymerase V subunit UmuC	NA	A0A1W6JNT0	Morganella_phage	79.5	6.0e-194
SQI39269.1|2809730_2810144_-	DNA polymerase V subunit UmuD	NA	A0A1W6JNS2	Morganella_phage	73.9	1.6e-50
SQI39270.1|2810591_2811110_-	Uncharacterised protein	NA	A0A0A0YPL5	Citrobacter_virus	34.2	2.1e-20
SQI39271.1|2811228_2811882_-|tail	Phage tail protein	tail	G8C7Q3	Escherichia_phage	57.3	4.8e-62
SQI39285.1|2811931_2812333_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39286.1|2812333_2812912_-	Uncharacterised protein	NA	G8C7Q1	Escherichia_phage	56.1	1.2e-51
SQI39287.1|2812913_2813264_-	Uncharacterised protein	NA	I6PD77	Cronobacter_phage	44.2	1.2e-19
SQI39288.1|2813266_2813749_-	Uncharacterised protein	NA	G8C7P9	Escherichia_phage	45.3	3.3e-31
SQI39289.1|2813832_2814798_-	Uncharacterised protein	NA	A0A1B0VMF8	Pseudomonas_phage	71.2	1.2e-125
SQI39290.1|2814811_2815447_-	Uncharacterised protein	NA	A0A1B0VMG1	Pseudomonas_phage	58.4	1.5e-60
SQI39291.1|2815452_2815587_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39292.1|2815699_2815918_-	Uncharacterised protein	NA	G8C7P5	Escherichia_phage	44.8	3.8e-11
SQI39293.1|2815959_2816553_-	Uncharacterised protein	NA	I6PD76	Cronobacter_phage	52.6	1.1e-44
SQI39294.1|2816530_2816821_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39301.1|2816817_2818188_-	Uncharacterised protein	NA	A0A1B0VMH0	Pseudomonas_phage	49.8	4.6e-123
SQI39305.1|2818187_2819675_-	Uncharacterised protein	NA	A0A1W6JNY3	Morganella_phage	88.4	3.2e-263
SQI39308.1|2819677_2820280_-	Uncharacterised protein	NA	A0A077KBY7	Edwardsiella_phage	66.0	5.3e-63
SQI39312.1|2820748_2821264_-	Outer membrane lipoprotein blc precursor	NA	A0A1W6JNX6	Morganella_phage	80.1	7.6e-79
SQI39354.1|2821734_2821866_+	entericidin B membrane lipoprotein	NA	NA	NA	NA	NA
SQI39370.1|2822052_2822286_+	Protein of uncharacterised function (DUF1161)	NA	NA	NA	NA	NA
SQI39371.1|2823134_2823347_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39373.1|2823460_2823922_-|lysis	Bacteriophage lysis protein	lysis	A0A1P8DTG0	Proteus_phage	54.7	9.1e-31
SQI39374.1|2823992_2824565_-	Phage-related lysozyme (muraminidase)	NA	A0A1R3Y5W5	Salmonella_virus	61.2	7.0e-49
>prophage 15
LS483467	Providencia alcalifaciens strain NCTC10286 genome assembly, chromosome: 1	4042926	2829837	2843795	4042926		Proteus_phage(38.89%)	30	NA	NA
SQI39386.1|2829837_2830218_-	Phage antitermination protein Q	NA	A0A0P0ZGJ3	Escherichia_phage	69.6	1.3e-46
SQI39387.1|2830221_2830452_-	Phage NinH protein	NA	NA	NA	NA	NA
SQI39388.1|2830502_2830961_-	Bacteriophage Lambda NinG protein	NA	C6ZR60	Salmonella_phage	76.2	1.2e-64
SQI39389.1|2831174_2831447_-	Uncharacterised protein	NA	A0A2I7R9W3	Vibrio_phage	40.8	6.8e-10
SQI39390.1|2831812_2832043_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39391.1|2832054_2832228_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39392.1|2832254_2832389_-	Uncharacterised protein	NA	A0A1P8DTF3	Proteus_phage	54.5	4.2e-05
SQI39393.1|2832415_2832928_-	Replication protein P	NA	A0A1P8DTF3	Proteus_phage	88.1	3.0e-43
SQI39394.1|2832924_2833875_-	phage replication protein O, N-terminal domain	NA	A0A1P8DTG2	Proteus_phage	49.7	4.4e-72
SQI39395.1|2833942_2834269_-	Uncharacterised protein	NA	A0A1W6JNY4	Morganella_phage	79.6	1.9e-43
SQI39396.1|2834400_2834610_-	transcriptional regulator, y4mF family	NA	K7PKH4	Enterobacteria_phage	78.3	3.3e-25
SQI39397.1|2834717_2835362_+	Uncharacterized HTH-type transcriptional regulator CBU_1416	NA	K7PH19	Enterobacteria_phage	63.3	5.8e-76
SQI39398.1|2835371_2835713_+	Protein of uncharacterised function (DUF3024)	NA	A0A1W6JP12	Morganella_phage	60.2	1.4e-36
SQI39399.1|2835896_2836322_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39400.1|2836318_2837074_+	Domain of uncharacterised function DUF1828	NA	NA	NA	NA	NA
SQI39401.1|2837148_2837382_+	Putative hemolysin	NA	NA	NA	NA	NA
SQI39402.1|2837581_2838106_+	Uncharacterised protein	NA	A0A1W6JNZ0	Morganella_phage	54.7	6.2e-36
SQI39403.1|2838149_2838359_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39404.1|2838484_2838703_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39405.1|2838699_2838912_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39406.1|2839056_2839281_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39407.1|2839388_2839571_+	Uncharacterised protein	NA	A0A1P8DTH8	Proteus_phage	80.0	5.3e-19
SQI39408.1|2839512_2839689_+	Uncharacterised protein	NA	A0A1P8DTG5	Proteus_phage	57.9	2.0e-10
SQI39409.1|2839698_2839866_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39410.1|2839862_2840696_+	Exodeoxyribonuclease 8	NA	A0A1P8DTH1	Proteus_phage	82.0	9.3e-135
SQI39411.1|2840673_2841480_+	P33	NA	A0A1P8DTF2	Proteus_phage	84.6	1.2e-126
SQI39412.1|2841469_2841925_+	Helix-destabilizing protein	NA	A0A1W6JNW8	Morganella_phage	64.0	1.9e-44
SQI39413.1|2842016_2842199_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI39414.1|2842437_2842659_+	Uncharacterised protein	NA	I6PBM8	Cronobacter_phage	61.8	2.2e-19
SQI39415.1|2842613_2843795_+	Tyrosine recombinase XerC	NA	I6PDJ1	Cronobacter_phage	68.5	2.2e-150
