The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483471	Streptococcus cristatus strain NCTC13807 genome assembly, chromosome: 1	2176084	132130	169456	2176084	transposase,protease,tRNA	Streptococcus_phage(22.22%)	38	NA	NA
SQI45462.1|132130_133387_-|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	39.3	1.6e-74
SQI45464.1|133582_135997_+	membrane carboxypeptidase	NA	NA	NA	NA	NA
SQI45465.1|136412_139985_+	DNA-directed RNA polymerase subunit beta	NA	A0A2P0VMZ3	Tetraselmis_virus	25.6	4.4e-40
SQI45466.1|140023_143668_+	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	25.4	4.3e-67
SQI45470.1|143925_144597_+|protease	CAAX amino terminal protease family protein	protease	NA	NA	NA	NA
SQI45471.1|144745_145375_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI45472.1|145561_146512_+	dihydropteroate synthase	NA	NA	NA	NA	NA
SQI45473.1|146508_147858_+	dihydrofolate synthetase	NA	NA	NA	NA	NA
SQI45474.1|147838_148393_+	GTP cyclohydrolase I	NA	E7DN69	Pneumococcus_phage	46.6	1.4e-38
SQI45475.1|148420_149233_+	bifunctional folate synthesis protein	NA	NA	NA	NA	NA
SQI45476.1|149327_150035_+	multidrug ABC transporter	NA	A0A2H4PQG7	Staphylococcus_phage	32.3	6.2e-31
SQI45477.1|150036_150825_+	ABC transporter permease	NA	NA	NA	NA	NA
SQI45479.1|150824_151547_+	ABC transporter permease	NA	NA	NA	NA	NA
SQI45481.1|151559_152258_+	DNA response regulator	NA	W8CYM9	Bacillus_phage	31.4	7.3e-24
SQI45482.1|152224_153262_+	sensor protein	NA	NA	NA	NA	NA
SQI45483.1|153558_153762_+	HTH DNA-binding protein	NA	NA	NA	NA	NA
SQI45484.1|153758_153923_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI45485.1|153932_154367_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI45486.1|154420_155905_-|protease	ATP-dependent Zn protease	protease	NA	NA	NA	NA
SQI45488.1|156024_157089_-	glutamyl aminopeptidase	NA	NA	NA	NA	NA
SQI45491.1|157167_157500_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI45496.1|157499_157814_+	thioredoxin family protein	NA	A0A223LE16	Aeromonas_phage	32.8	1.5e-05
SQI45497.1|157844_158471_+|tRNA	phenylalanyl-tRNA synthetase subunit beta	tRNA	NA	NA	NA	NA
SQI45498.1|158551_158947_+	single-stranded DNA-binding protein	NA	A1EAD1	Streptococcus_phage	45.5	3.0e-27
SQI45499.1|159207_159504_+	ESAT-6/WXG100 secretion system protein	NA	NA	NA	NA	NA
SQI45500.1|159583_160003_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI45501.1|160018_160282_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI45502.1|160305_160965_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQI45503.1|160961_162356_+|transposase	transposase, Gram-positive bacteria	transposase	NA	NA	NA	NA
SQI45504.1|162390_163137_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI45505.1|163298_163613_+	Putative EsaC protein analog (Listeria type 3)	NA	A0A1X9I6T6	Streptococcus_phage	41.6	6.8e-14
SQI45506.1|163710_163944_+|transposase	transposase, Gram-positive bacteria	transposase	NA	NA	NA	NA
SQI45507.1|163992_165315_+|transposase	transposase, Gram-positive bacteria	transposase	NA	NA	NA	NA
SQI45508.1|165311_166289_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI45509.1|166289_166739_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI45510.1|166738_167200_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI45511.1|167398_167551_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI45512.1|168160_169456_+|transposase	transposase, Gram-positive bacteria	transposase	NA	NA	NA	NA
>prophage 2
LS483471	Streptococcus cristatus strain NCTC13807 genome assembly, chromosome: 1	2176084	442978	453455	2176084		Streptococcus_phage(90.0%)	13	NA	NA
SQI45811.1|442978_444358_+	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	NA	A0A2K9L4K9	Tupanvirus	35.2	5.5e-31
SQI45812.1|444366_444915_+	MutT/nudix family protein	NA	NA	NA	NA	NA
SQI45813.1|444931_445243_+	membrane protein	NA	NA	NA	NA	NA
SQI45814.1|445324_446017_+	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
SQI45815.1|446346_447234_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	55.3	5.0e-86
SQI45816.1|447414_448053_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	71.6	5.4e-82
SQI45817.1|448049_448952_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	55.1	6.9e-83
SQI45818.1|448961_449279_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	9.9e-29
SQI45819.1|449281_450148_+	tetrapyrrole methylase family protein	NA	M1PLC5	Streptococcus_phage	73.5	5.5e-114
SQI45820.1|450286_451378_+	3-phosphoserine/phosphohydroxythreonine aminotransferase	NA	M1Q1P2	Streptococcus_phage	79.1	4.9e-168
SQI45821.1|451390_452566_+	D-3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	79.7	9.0e-176
SQI45822.1|452562_453069_+	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	64.8	8.9e-56
SQI45823.1|453101_453455_+	ArsC family transcription regulator	NA	M1PLC0	Streptococcus_phage	65.0	2.2e-37
>prophage 3
LS483471	Streptococcus cristatus strain NCTC13807 genome assembly, chromosome: 1	2176084	748230	762662	2176084	tRNA,integrase	Streptococcus_phage(100.0%)	22	751773:751788	761594:761609
SQI46548.1|748230_749361_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	56.1	6.4e-86
SQI46549.1|749483_749843_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI46550.1|749839_750298_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQI46551.1|750482_751787_+	Enolase	NA	W6LP63	Streptococcus_phage	96.8	3.7e-239
751773:751788	attL	AACTTGAAAAAATAAT	NA	NA	NA	NA
SQI46552.1|751940_753104_-|integrase	phage integrase family integrase/recombinase	integrase	A0A1X9I6A9	Streptococcus_phage	91.0	2.2e-206
SQI46591.1|753198_753873_-	phage-associated protein	NA	O34051	Streptococcus_phage	56.7	1.9e-13
SQI46592.1|754043_754232_+	phage protein	NA	A0A1X9I5U7	Streptococcus_phage	98.4	1.2e-26
SQI46593.1|754466_754733_+	phage protein	NA	NA	NA	NA	NA
SQI46594.1|754806_755238_+	Uncharacterised protein	NA	A0A1X9I5T7	Streptococcus_phage	70.4	9.9e-56
SQI46595.1|755515_755656_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI46596.1|755785_756466_+	replication protein	NA	A0A2I6QQV2	Streptococcus_phage	62.5	1.6e-60
SQI46597.1|756481_757306_+	putative phage replication protein	NA	A0A1X9I6C4	Streptococcus_phage	38.1	5.5e-47
SQI46598.1|757611_758058_+	Uncharacterised protein	NA	A0A1X9I5T7	Streptococcus_phage	55.1	1.8e-39
SQI46599.1|758054_758225_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI46600.1|758373_758550_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI46601.1|758628_759261_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQI46602.1|759269_759752_+	phage protein	NA	A0A1S5SEB0	Streptococcus_phage	47.3	8.3e-27
SQI46603.1|759732_760143_+	Uncharacterised protein	NA	K4JTJ9	Streptococcus_phage	53.2	1.2e-31
SQI46604.1|760767_761133_+	Phage-related protein	NA	NA	NA	NA	NA
SQI46605.1|761122_761416_+	toxin-antitoxin system, antitoxin component, Xre family	NA	NA	NA	NA	NA
SQI46606.1|761683_762259_+	Uncharacterised protein	NA	NA	NA	NA	NA
761594:761609	attR	AACTTGAAAAAATAAT	NA	NA	NA	NA
SQI46607.1|762476_762662_-|tRNA	isoleucyl-tRNA synthetase	tRNA	W6LMT3	Streptococcus_phage	60.7	2.4e-14
>prophage 4
LS483471	Streptococcus cristatus strain NCTC13807 genome assembly, chromosome: 1	2176084	936156	945756	2176084		Streptococcus_phage(42.86%)	11	NA	NA
SQI47145.1|936156_937074_+	Aspartate carbamoyltransferase	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	29.7	8.7e-25
SQI47147.1|937219_937786_-	Substrate-specific component STY3230 of queuosine-regulated ECF transporter	NA	NA	NA	NA	NA
SQI47149.1|937790_938768_-	preQ1-regulated inosine-uridine nucleoside hydrolase	NA	NA	NA	NA	NA
SQI47151.1|939067_939448_+	endoribonuclease L-PSP	NA	NA	NA	NA	NA
SQI47154.1|939516_940407_+	glmZ(sRNA)-inactivating NTPase	NA	A0A0R8VB27	Thermobifida_phage	29.8	3.0e-06
SQI47159.1|940403_941381_+	transporter	NA	A1IMD5	Streptococcus_phage	82.5	2.1e-154
SQI47164.1|941377_942289_+	cytoplasmic protein	NA	Q7AWZ3	Streptococcus_phage	73.3	1.3e-118
SQI47232.1|942321_943290_-	thioredoxin-disulfide reductase	NA	Q9JRK7	Streptococcus_phage	75.0	7.0e-49
SQI47240.1|943400_944717_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	42.3	1.5e-94
SQI47243.1|944909_945266_+	integral membrane protein	NA	NA	NA	NA	NA
SQI47251.1|945378_945756_+	penicillinase repressor	NA	X5JAW5	Clostridium_phage	35.0	2.0e-12
>prophage 5
LS483471	Streptococcus cristatus strain NCTC13807 genome assembly, chromosome: 1	2176084	1578345	1644349	2176084	transposase,protease,holin	Streptococcus_phage(72.0%)	63	NA	NA
SQI48415.1|1578345_1580619_+|protease	ATP dependent protease	protease	K4FB40	Cronobacter_phage	40.2	4.4e-126
SQI48416.1|1580802_1582857_-	NhaP-type Na+/H+ and K+/H+ antiporter	NA	NA	NA	NA	NA
SQI48417.1|1582869_1583124_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI48418.1|1583172_1583721_-	methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	42.4	1.0e-33
SQI48419.1|1583714_1584662_-	radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	48.6	5.6e-35
SQI48420.1|1584721_1585030_-	DNA methyltransferase protein	NA	NA	NA	NA	NA
SQI48421.1|1585282_1585933_-	PAP2 family protein	NA	NA	NA	NA	NA
SQI48422.1|1585922_1586480_-	riboflavin transporter	NA	NA	NA	NA	NA
SQI48423.1|1586946_1587864_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI48424.1|1587921_1588431_-	rRNA methylase	NA	NA	NA	NA	NA
SQI48425.1|1588736_1590086_+	potassium transporter peripheral membrane component	NA	NA	NA	NA	NA
SQI48426.1|1590090_1591530_+	Trk family potassium uptake protein	NA	NA	NA	NA	NA
SQI48427.1|1591847_1592381_-	Protein of uncharacterised function, DUF600	NA	NA	NA	NA	NA
SQI48428.1|1592409_1592661_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI48429.1|1592726_1593119_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI48430.1|1593233_1595384_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
SQI48431.1|1595710_1596304_-	Domain of uncharacterised function (DUF1851)	NA	NA	NA	NA	NA
SQI48432.1|1596365_1596971_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI48433.1|1596954_1597962_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
SQI48434.1|1598089_1598782_-	Domain of uncharacterised function (DUF1911)	NA	NA	NA	NA	NA
SQI48435.1|1598789_1601081_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
SQI48436.1|1601073_1601793_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQI48437.1|1601792_1602092_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI48438.1|1602103_1602532_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI48439.1|1602597_1604211_-	metal dependent phosphohydrase	NA	NA	NA	NA	NA
SQI48440.1|1604488_1604971_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
SQI48441.1|1605066_1605756_-	DNA-binding response regulator	NA	NA	NA	NA	NA
SQI48442.1|1605765_1607190_-|holin	choline binding protein J	holin	M4QQM4	Ostreococcus_lucimarinus_virus	29.6	3.5e-41
SQI48443.1|1607352_1608816_-	flotillin-like protein	NA	NA	NA	NA	NA
SQI48444.1|1608996_1609680_-	integral membrane protein, receptor	NA	NA	NA	NA	NA
SQI48445.1|1609699_1610164_-	HD superfamily metal-dependent phosphohydrolase	NA	NA	NA	NA	NA
SQI48446.1|1610235_1610976_-	SpoU rRNA methylase family protein	NA	NA	NA	NA	NA
SQI48447.1|1611117_1611396_+	acylphosphatase	NA	NA	NA	NA	NA
SQI48448.1|1611477_1612398_+	OxaA-like protein precursor	NA	NA	NA	NA	NA
SQI48449.1|1612662_1613598_-	dihydroorotate dehydrogenase 1A	NA	A0A1V0SH91	Hokovirus	45.5	4.2e-67
SQI48450.1|1613821_1615168_+	glutamate dehydrogenase	NA	NA	NA	NA	NA
SQI48451.1|1615238_1615979_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
SQI48452.1|1615975_1616665_-	phosphoglycerate mutase	NA	NA	NA	NA	NA
SQI48453.1|1616781_1617474_-	phosphoglycerate mutase	NA	NA	NA	NA	NA
SQI48454.1|1617739_1619077_-	UPF0210 protein SSU05	NA	NA	NA	NA	NA
SQI48455.1|1619088_1619355_-	ACT domain-containing protein	NA	NA	NA	NA	NA
SQI48456.1|1619651_1622921_+	LPXTG cell wall surface protein, zinc carboxypeptidase family	NA	NA	NA	NA	NA
SQI48457.1|1623062_1623545_-	acetyltransferase	NA	NA	NA	NA	NA
SQI48458.1|1623975_1624290_+	Bacterial protein of uncharacterised function (DUF961)	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
SQI48459.1|1624308_1624692_+	Bacterial protein of uncharacterised function (DUF961)	NA	A0A1S5SF96	Streptococcus_phage	100.0	2.3e-64
SQI48460.1|1624720_1626106_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
SQI48461.1|1626283_1627702_+	transcriptional regulator protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	1.5e-233
SQI48462.1|1627958_1628696_+	erythromycin ribosome methylase	NA	E4ZFQ0	Streptococcus_phage	99.2	3.1e-134
SQI48463.1|1628700_1628832_+	Uncharacterised protein	NA	E4ZFP9	Streptococcus_phage	100.0	7.9e-17
SQI48464.1|1628952_1630200_-|transposase	transposase	transposase	Q6V7R1	Burkholderia_virus	23.9	3.9e-12
SQI48465.1|1630379_1630601_+	FIG086557: Conjugation related protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
SQI48466.1|1630717_1631215_+	Antirestriction protein	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
SQI48467.1|1631189_1631696_+	TcpE family	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
SQI48468.1|1631679_1634127_+	Type IV secretory pathway, VirB4 components	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
SQI48469.1|1634195_1636307_+	Tn916 ORF15 signal peptide containing protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
SQI48470.1|1636303_1637305_+	lipoprotein, NLP/P60 family	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
SQI48471.1|1637319_1638237_+	putative conjugative transposon protein	NA	A0A1S5SF22	Streptococcus_phage	99.0	1.0e-166
SQI48472.1|1638613_1640533_+	tetracycline resistance protein TetM	NA	A0A2K5B2A5	Erysipelothrix_phage	99.7	0.0e+00
SQI48473.1|1640878_1641232_-	anaerobic benzoate catabolism transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
SQI48474.1|1641736_1642159_+	RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
SQI48475.1|1642155_1642386_+	Helix-turn-helix domain	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
SQI48476.1|1642846_1643050_+	Mobile element protein	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
SQI48477.1|1643131_1644349_+	Mobile element protein	NA	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
>prophage 6
LS483471	Streptococcus cristatus strain NCTC13807 genome assembly, chromosome: 1	2176084	2022925	2032716	2176084		Streptococcus_phage(50.0%)	10	NA	NA
SQI49947.1|2022925_2024734_-	protein Cps9E	NA	A0A1V0SAI8	Catovirus	27.5	2.5e-23
SQI49948.1|2024752_2025451_-	putative autophosphorylating protein tyrosine kinase	NA	A0A1X9I5D6	Streptococcus_phage	56.5	1.5e-64
SQI49950.1|2025459_2026155_-	MPA1 family polysaccharide export protein	NA	A0A1X9I5E1	Streptococcus_phage	54.6	6.5e-57
SQI49951.1|2026183_2026915_-	wzh/putative phosphotyrosine-protein phosphatase	NA	NA	NA	NA	NA
SQI49952.1|2026918_2028376_-	transcriptional regulator	NA	A0A1X9I5X1	Streptococcus_phage	63.0	2.9e-147
SQI49953.1|2028708_2029308_-	organic radical activating chaperone	NA	A0A0C5K925	Enterococcus_phage	59.4	1.8e-55
SQI49954.1|2029273_2029819_-	acetyl transferase	NA	NA	NA	NA	NA
SQI49955.1|2029828_2030326_-	acetyltransferase	NA	NA	NA	NA	NA
SQI49956.1|2030378_2030519_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQI49957.1|2030520_2032716_-	anaerobic ribonucleoside triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.9	1.3e-284
