assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900618265.1_paerg004	LR130531	Pseudomonas aeruginosa isolate paerg004 genome assembly, chromosome: 0	1	124599-125465	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,DEDDh,WYL,cas3	Type I-F	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	12,14,14	14	TypeI-F	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,DEDDh,WYL,cas3	NA|82aa|up_7|LR130531.1_104450_104696_-,NA|266aa|up_1|LR130531.1_122336_123134_-,NA|105aa|down_6|LR130531.1_134890_135205_-	NA|70aa|up_9|LR130531.1_103203_103413_+	pfam07869, DUF1656, Protein of unknown function (DUF1656)	NA|335aa|up_8|LR130531.1_103409_104414_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|82aa|up_7|LR130531.1_104450_104696_-	NA	NA|305aa|up_6|LR130531.1_104951_105866_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|338aa|up_5|LR130531.1_106038_107052_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|188aa|up_4|LR130531.1_107131_107695_-	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|255aa|up_3|LR130531.1_108338_109103_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|4343aa|up_2|LR130531.1_109175_122204_+	PRK05691, PRK05691, peptide synthase; Validated	NA|266aa|up_1|LR130531.1_122336_123134_-	NA	NA|171aa|up_0|LR130531.1_123691_124204_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|down_0|LR130531.1_125588_126152_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|down_1|LR130531.1_126155_127184_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|down_2|LR130531.1_127194_128178_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|435aa|down_3|LR130531.1_128164_129469_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|down_4|LR130531.1_129526_132757_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|down_5|LR130531.1_132753_133728_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_6|LR130531.1_134890_135205_-	NA	NA|307aa|down_7|LR130531.1_135909_136830_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|473aa|down_8|LR130531.1_136862_138281_-	pfam03573, OprD, outer membrane porin, OprD family	NA|227aa|down_9|LR130531.1_138362_139043_-	cd01012, YcaC_related, YcaC related amidohydrolases; E
GCA_900618265.1_paerg004	LR130531	Pseudomonas aeruginosa isolate paerg004 genome assembly, chromosome: 0	2	133989-134620	2,2,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,DEDDh,WYL,cas3	Type I-F	CGTTCACTGCCGTGTAGGCAGCTAAGAAACTCG,TTTCTTAGCTGCCTACACGGCAGTGAAC,TTTCTTAGCTGCCTACACGGCAGTGAAC,GTTCACTGCCGTGTAGGCAGCTAAGAAA	33,28,28,28	0	0	NA	NA	I-F:I-F:I-F:I-F	8,10,10,8	10	TypeI-F	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,DEDDh,WYL,cas3	NA|266aa|up_7|LR130531.1_122336_123134_-,NA|105aa|down_0|LR130531.1_134890_135205_-	NA|255aa|up_9|LR130531.1_108338_109103_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|4343aa|up_8|LR130531.1_109175_122204_+	PRK05691, PRK05691, peptide synthase; Validated	NA|266aa|up_7|LR130531.1_122336_123134_-	NA	NA|171aa|up_6|LR130531.1_123691_124204_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|up_5|LR130531.1_125588_126152_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|up_4|LR130531.1_126155_127184_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|up_3|LR130531.1_127194_128178_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|435aa|up_2|LR130531.1_128164_129469_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|up_1|LR130531.1_129526_132757_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|up_0|LR130531.1_132753_133728_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_0|LR130531.1_134890_135205_-	NA	NA|307aa|down_1|LR130531.1_135909_136830_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|473aa|down_2|LR130531.1_136862_138281_-	pfam03573, OprD, outer membrane porin, OprD family	NA|227aa|down_3|LR130531.1_138362_139043_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|287aa|down_4|LR130531.1_139140_140001_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|313aa|down_5|LR130531.1_140101_141040_+	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional	NA|548aa|down_6|LR130531.1_141043_142687_-	PRK13272, treA, alpha,alpha-trehalase TreA	NA|142aa|down_7|LR130531.1_143044_143470_+	COG4244, COG4244, Predicted membrane protein [Function unknown]	NA|440aa|down_8|LR130531.1_143462_144782_+	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]	NA|470aa|down_9|LR130531.1_144960_146370_+	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
GCA_900618265.1_paerg004	LR130531	Pseudomonas aeruginosa isolate paerg004 genome assembly, chromosome: 0	3	3666377-3666536	3	CRISPRCasFinder	no		cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,DEDDh,WYL,cas3	Orphan	ACCCCCGGCCCGGCCATCCTGGCCGGTCGTTCGCCCTTCAAAACGCATGCG	51	0	0	NA	NA	NA	1	1	Orphan	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,DEDDh,WYL,cas3	NA,NA	NA|198aa|up_9|LR130531.1_3655707_3656301_-	PRK10739, PRK10739, YhgN family NAAT transporter	NA|672aa|up_8|LR130531.1_3656418_3658434_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|293aa|up_7|LR130531.1_3658430_3659309_-	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|212aa|up_6|LR130531.1_3659324_3659960_-	cd03019, DsbA_DsbA, DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold	NA|202aa|up_5|LR130531.1_3660127_3660733_-	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|98aa|up_4|LR130531.1_3660778_3661072_-	COG3245, CycB, Cytochrome c5 [Energy production and conversion]	NA|216aa|up_3|LR130531.1_3661255_3661903_+	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|914aa|up_2|LR130531.1_3662166_3664908_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|97aa|up_1|LR130531.1_3664985_3665276_+	pfam11191, DUF2782, Protein of unknown function (DUF2782)	NA|317aa|up_0|LR130531.1_3665309_3666260_+	PRK05231, PRK05231, homoserine kinase; Provisional	NA|230aa|down_0|LR130531.1_3666548_3667238_-	COG0209, NrdA, Ribonucleotide reductase, alpha subunit [Nucleotide transport and metabolism]	NA|735aa|down_1|LR130531.1_3667254_3669459_-	TIGR02504, ribonucleotide_reductase, ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent	NA|308aa|down_2|LR130531.1_3669568_3670492_-	COG4531, ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]	NA|168aa|down_3|LR130531.1_3670561_3671065_+	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|270aa|down_4|LR130531.1_3671064_3671874_+	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|263aa|down_5|LR130531.1_3671866_3672655_+	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|264aa|down_6|LR130531.1_3672693_3673485_+	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|336aa|down_7|LR130531.1_3673691_3674699_+	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|226aa|down_8|LR130531.1_3674698_3675376_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|261aa|down_9|LR130531.1_3675452_3676235_+	cd13597, PBP2_lipoprotein_Tp32, The substrate-binding domain of the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum binds L-methionine; the type 2 periplasmic-binding protein fold
GCA_900618265.1_paerg004	LR130531	Pseudomonas aeruginosa isolate paerg004 genome assembly, chromosome: 0	4	4097504-4097617	4	CRISPRCasFinder	no		cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,DEDDh,WYL,cas3	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,DEDDh,WYL,cas3	NA,NA|168aa|down_2|LR130531.1_4102189_4102693_-,NA|251aa|down_5|LR130531.1_4104446_4105199_-,NA|185aa|down_7|LR130531.1_4105967_4106522_-,NA|30aa|down_8|LR130531.1_4106584_4106674_+	NA|293aa|up_9|LR130531.1_4084352_4085231_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|LR130531.1_4085393_4086059_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|LR130531.1_4086119_4087181_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|LR130531.1_4087436_4088813_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|LR130531.1_4089091_4089844_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|LR130531.1_4089884_4091243_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|LR130531.1_4091308_4092679_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|LR130531.1_4092794_4093898_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|LR130531.1_4094316_4095414_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|LR130531.1_4095468_4096623_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|LR130531.1_4098660_4101048_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|351aa|down_1|LR130531.1_4101158_4102211_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_2|LR130531.1_4102189_4102693_-	NA	NA|192aa|down_3|LR130531.1_4102797_4103373_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|314aa|down_4|LR130531.1_4103485_4104427_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_5|LR130531.1_4104446_4105199_-	NA	NA|210aa|down_6|LR130531.1_4105316_4105946_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_7|LR130531.1_4105967_4106522_-	NA	NA|30aa|down_8|LR130531.1_4106584_4106674_+	NA	NA|165aa|down_9|LR130531.1_4106787_4107282_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]
GCA_900618265.1_paerg004	LR130531	Pseudomonas aeruginosa isolate paerg004 genome assembly, chromosome: 0	5	5244660-5245647	5,3,4	CRISPRCasFinder,CRT,PILER-CR	no		cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,DEDDh,WYL,cas3	Orphan	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTANAGGCAGCTAAGAAA,GTTCACTGCCGTACAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	16,16,15	16	Orphan	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,DEDDh,WYL,cas3	NA|105aa|up_0|LR130531.1_5244073_5244388_+,NA|141aa|down_2|LR130531.1_5247682_5248105_-,NA|59aa|down_7|LR130531.1_5251283_5251460_-	NA|329aa|up_9|LR130531.1_5233793_5234780_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|110aa|up_8|LR130531.1_5234796_5235126_-	pfam06942, GlpM, GlpM protein	NA|513aa|up_7|LR130531.1_5235258_5236797_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|252aa|up_6|LR130531.1_5237074_5237830_-	PRK10906, PRK10906, DeoR/GlpR family transcriptional regulator	NA|506aa|up_5|LR130531.1_5238035_5239553_-	PRK00047, glpK, glycerol kinase GlpK	NA|280aa|up_4|LR130531.1_5239592_5240432_-	cd00333, MIP, Major intrinsic protein (MIP) superfamily	NA|157aa|up_3|LR130531.1_5240696_5241167_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|495aa|up_2|LR130531.1_5241230_5242715_+	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases	NA|262aa|up_1|LR130531.1_5242910_5243696_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|105aa|up_0|LR130531.1_5244073_5244388_+	NA	NA|103aa|down_0|LR130531.1_5246101_5246410_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|274aa|down_1|LR130531.1_5246442_5247264_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|141aa|down_2|LR130531.1_5247682_5248105_-	NA	NA|177aa|down_3|LR130531.1_5248204_5248735_-	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	NA|66aa|down_4|LR130531.1_5248917_5249115_+	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|213aa|down_5|LR130531.1_5249093_5249732_-	PRK09975, PRK09975, DNA-binding transcriptional regulator EnvR; Provisional	NA|393aa|down_6|LR130531.1_5250097_5251276_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|59aa|down_7|LR130531.1_5251283_5251460_-	NA	NA|308aa|down_8|LR130531.1_5251586_5252510_-	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain	NA|498aa|down_9|LR130531.1_5252641_5254135_+	TIGR01722, Methylmalonate-semialdehyde_dehydrogenase, methylmalonic acid semialdehyde dehydrogenase
GCA_900618265.1_paerg004	LR130531	Pseudomonas aeruginosa isolate paerg004 genome assembly, chromosome: 0	6	5613148-5613249	6	CRISPRCasFinder	no	DEDDh	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,DEDDh,WYL,cas3	Unclear	GCGGCGGGTATCGGCGGATAACGCC	25	0	0	NA	NA	NA	1	1	Orphan	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,DEDDh,WYL,cas3	NA|454aa|up_7|LR130531.1_5605273_5606635_-,NA|106aa|down_6|LR130531.1_5619492_5619810_+	NA|286aa|up_9|LR130531.1_5603469_5604327_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|268aa|up_8|LR130531.1_5604466_5605270_-	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane]	NA|454aa|up_7|LR130531.1_5605273_5606635_-	NA	NA|74aa|up_6|LR130531.1_5606777_5606999_-	COG3205, COG3205, Predicted membrane protein [Function unknown]	NA|286aa|up_5|LR130531.1_5607292_5608150_+	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold	NA|104aa|up_4|LR130531.1_5608367_5608679_+	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|552aa|up_3|LR130531.1_5608675_5610331_+	PRK09395, actP, cation/acetate symporter ActP	NA|600aa|up_2|LR130531.1_5610420_5612220_+	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	DEDDh|209aa|up_1|LR130531.1_5612216_5612843_+	PRK09145, PRK09145, 3'-5' exonuclease	NA|53aa|up_0|LR130531.1_5612951_5613110_+	pfam11752, DUF3309, Protein of unknown function (DUF3309)	NA|375aa|down_0|LR130531.1_5613384_5614509_+	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown]	NA|89aa|down_1|LR130531.1_5614541_5614808_-	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|611aa|down_2|LR130531.1_5615089_5616922_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|188aa|down_3|LR130531.1_5616984_5617548_-	PRK10903, PRK10903, peptidylprolyl isomerase A	NA|276aa|down_4|LR130531.1_5617529_5618357_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|310aa|down_5|LR130531.1_5618363_5619293_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|106aa|down_6|LR130531.1_5619492_5619810_+	NA	NA|214aa|down_7|LR130531.1_5619956_5620598_+	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|300aa|down_8|LR130531.1_5620702_5621602_-	pfam00892, EamA, EamA-like transporter family	NA|112aa|down_9|LR130531.1_5621611_5621947_-	PRK10089, PRK10089, chaperone CsaA
