assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900635215.1_39859_D02	LR134082	Escherichia coli strain NCTC9038 genome assembly, chromosome: 1	1	999323-999717	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,29,28	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Orphan	cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	NA|47aa|up_1|LR134082.1_998032_998173_-,NA	NA|434aa|up_9|LR134082.1_988729_990031_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|LR134082.1_990078_992313_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|LR134082.1_992390_992639_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|LR134082.1_992638_992974_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|LR134082.1_993044_993836_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|LR134082.1_994063_995701_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|LR134082.1_995788_997087_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|LR134082.1_997146_998019_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|LR134082.1_998032_998173_-	NA	NA|224aa|up_0|LR134082.1_998311_998983_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|258aa|down_0|LR134082.1_1000355_1001129_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|212aa|down_1|LR134082.1_1001197_1001833_-	COG1070, XylB, Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]	NA|426aa|down_2|LR134082.1_1001859_1003137_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_3|LR134082.1_1003455_1004241_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_4|LR134082.1_1004310_1005765_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_5|LR134082.1_1005786_1007196_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_6|LR134082.1_1007173_1007953_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_7|LR134082.1_1007949_1008810_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_8|LR134082.1_1008957_1009533_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_9|LR134082.1_1009549_1009810_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]
GCA_900635215.1_39859_D02	LR134082	Escherichia coli strain NCTC9038 genome assembly, chromosome: 1	2	1017947-1018280	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	5,5,5	5	Orphan	cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	NA|47aa|up_1|LR134082.1_1016593_1016734_-,NA	NA|287aa|up_9|LR134082.1_1007949_1008810_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|up_8|LR134082.1_1008957_1009533_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|up_7|LR134082.1_1009549_1009810_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|423aa|up_6|LR134082.1_1009800_1011069_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|122aa|up_5|LR134082.1_1011146_1011512_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_4|LR134082.1_1011827_1013627_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_3|LR134082.1_1013626_1015339_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_2|LR134082.1_1015412_1016147_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|47aa|up_1|LR134082.1_1016593_1016734_-	NA	NA|371aa|up_0|LR134082.1_1016756_1017869_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|346aa|down_0|LR134082.1_1018362_1019400_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|LR134082.1_1019651_1020560_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|LR134082.1_1020561_1021989_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|LR134082.1_1021988_1022594_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|LR134082.1_1022643_1022967_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|LR134082.1_1023160_1023472_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|LR134082.1_1023490_1024201_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|LR134082.1_1024200_1024680_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|LR134082.1_1024676_1025726_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|LR134082.1_1025706_1026468_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCA_900635215.1_39859_D02	LR134082	Escherichia coli strain NCTC9038 genome assembly, chromosome: 1	3	1533436-1533553	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|300aa|up_9|LR134082.1_1522919_1523819_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_8|LR134082.1_1524011_1525202_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_7|LR134082.1_1525198_1526458_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_6|LR134082.1_1526447_1528076_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_5|LR134082.1_1528348_1529707_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_4|LR134082.1_1529711_1530788_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|69aa|up_3|LR134082.1_1530829_1531036_-	PRK09729, PRK09729, hypothetical protein; Provisional	NA|217aa|up_2|LR134082.1_1531250_1531901_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|LR134082.1_1531954_1532209_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|LR134082.1_1532208_1533339_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|LR134082.1_1533572_1535858_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1235aa|down_1|LR134082.1_1536601_1540306_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|LR134082.1_1540433_1541156_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|LR134082.1_1541302_1543930_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|406aa|down_4|LR134082.1_1544078_1545296_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|106aa|down_5|LR134082.1_1545338_1545656_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|37aa|down_6|LR134082.1_1545655_1545766_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_7|LR134082.1_1545762_1546386_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|215aa|down_8|LR134082.1_1546529_1547174_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|890aa|down_9|LR134082.1_1547203_1549873_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]
GCA_900635215.1_39859_D02	LR134082	Escherichia coli strain NCTC9038 genome assembly, chromosome: 1	4	2132538-2132661	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|79aa|up_9|LR134082.1_2121446_2121683_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|up_8|LR134082.1_2121993_2123406_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_7|LR134082.1_2123962_2124172_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_6|LR134082.1_2124626_2125253_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_5|LR134082.1_2125273_2127376_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_4|LR134082.1_2127388_2128027_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|185aa|up_3|LR134082.1_2128203_2128758_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_2|LR134082.1_2128754_2129540_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|255aa|up_1|LR134082.1_2129591_2130356_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_0|LR134082.1_2130367_2131972_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|419aa|down_0|LR134082.1_2132975_2134232_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|LR134082.1_2134272_2135646_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|LR134082.1_2135860_2136502_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|321aa|down_3|LR134082.1_2136541_2137504_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|58aa|down_4|LR134082.1_2137515_2137689_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_5|LR134082.1_2137979_2139191_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_6|LR134082.1_2139303_2140236_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_7|LR134082.1_2140232_2141258_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|390aa|down_8|LR134082.1_2141811_2142981_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|LR134082.1_2143215_2143797_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCA_900635215.1_39859_D02	LR134082	Escherichia coli strain NCTC9038 genome assembly, chromosome: 1	6	3089205-3089349	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|171aa|up_9|LR134082.1_3076569_3077082_-	TIGR02667, Molybdenum_cofactor_biosynthesis_protein_B	NA|303aa|up_8|LR134082.1_3078489_3079398_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|LR134082.1_3079589_3081611_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|LR134082.1_3082189_3082867_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|LR134082.1_3082859_3083615_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|LR134082.1_3083601_3084756_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|LR134082.1_3084752_3085793_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|LR134082.1_3085879_3087169_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|LR134082.1_3087227_3087704_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|LR134082.1_3087855_3089139_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|LR134082.1_3089372_3091634_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|LR134082.1_3091816_3093250_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|LR134082.1_3093325_3094378_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|LR134082.1_3094561_3095515_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|LR134082.1_3095555_3096551_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|LR134082.1_3096705_3097524_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|LR134082.1_3097524_3098583_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|LR134082.1_3098585_3099275_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|LR134082.1_3099274_3100048_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|LR134082.1_3100214_3100364_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCA_900635215.1_39859_D02	LR134082	Escherichia coli strain NCTC9038 genome assembly, chromosome: 1	7	3360276-3360372	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|231aa|up_9|LR134082.1_3352062_3352755_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|LR134082.1_3352974_3353517_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|321aa|up_7|LR134082.1_3353900_3354863_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|LR134082.1_3354864_3355077_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|LR134082.1_3355184_3355706_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|LR134082.1_3355741_3357127_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|LR134082.1_3357300_3357795_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|LR134082.1_3357797_3358520_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|LR134082.1_3358637_3359147_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|LR134082.1_3359143_3360211_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|LR134082.1_3360405_3361299_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|LR134082.1_3361295_3362111_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|LR134082.1_3362121_3363381_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|LR134082.1_3363390_3365058_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|LR134082.1_3365374_3366424_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|LR134082.1_3366445_3367681_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|LR134082.1_3367691_3368477_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|LR134082.1_3368704_3369850_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|LR134082.1_3369871_3371173_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|LR134082.1_3371229_3372591_-	PRK08044, PRK08044, allantoinase AllB
GCA_900635215.1_39859_D02	LR134082	Escherichia coli strain NCTC9038 genome assembly, chromosome: 1	8	3508297-3508441	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|357aa|up_9|LR134082.1_3493434_3494505_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|LR134082.1_3494597_3495179_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|606aa|up_7|LR134082.1_3495183_3497001_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|LR134082.1_3497157_3498531_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|LR134082.1_3498606_3499926_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|LR134082.1_3500332_3501628_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|LR134082.1_3501685_3502375_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|LR134082.1_3502564_3503767_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_1|LR134082.1_3503763_3506910_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|423aa|up_0|LR134082.1_3506951_3508220_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|LR134082.1_3508464_3509373_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|326aa|down_1|LR134082.1_3509431_3510409_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|40aa|down_2|LR134082.1_3510769_3510889_+	PRK05324, PRK05324, succinylglutamate desuccinylase; Provisional	NA|95aa|down_3|LR134082.1_3511055_3511340_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_4|LR134082.1_3511411_3512089_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_5|LR134082.1_3512346_3512538_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_6|LR134082.1_3512587_3513112_-	PRK03731, aroL, shikimate kinase AroL	NA|153aa|down_7|LR134082.1_3513294_3513753_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|270aa|down_8|LR134082.1_3513872_3514682_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|223aa|down_9|LR134082.1_3514698_3515367_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional
GCA_900635215.1_39859_D02	LR134082	Escherichia coli strain NCTC9038 genome assembly, chromosome: 1	9	3895728-3895869	9	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|96aa|up_9|LR134082.1_3884719_3885007_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|LR134082.1_3885003_3886290_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|LR134082.1_3886340_3887282_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_6|LR134082.1_3887296_3888067_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|LR134082.1_3888539_3890054_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|LR134082.1_3890084_3891227_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|LR134082.1_3891355_3892573_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|LR134082.1_3892646_3894200_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|LR134082.1_3894308_3895094_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|LR134082.1_3895099_3895690_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|LR134082.1_3895898_3896294_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_1|LR134082.1_3896555_3899777_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_2|LR134082.1_3899794_3900943_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_3|LR134082.1_3901398_3902220_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_4|LR134082.1_3902386_3903301_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_5|LR134082.1_3903366_3904317_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|LR134082.1_3904318_3904768_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|LR134082.1_3904892_3905387_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|LR134082.1_3905386_3908203_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|LR134082.1_3908245_3909187_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
