The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	275433	317526	2844405	lysis,transposase,holin	Lactococcus_phage(28.57%)	39	NA	NA
VDZ16274.1|275433_277188_+|lysis	Autolysis histidine kinase LytS	lysis	Q9EYF3	Enterobacteria_phage	31.5	9.0e-63
VDZ16275.1|277190_277931_+|lysis	Autolysis response regulater LytR	lysis	NA	NA	NA	NA
VDZ16276.1|278049_278487_+|holin	holin-like protein	holin	NA	NA	NA	NA
VDZ16277.1|278479_279181_+	LrgA-associated membrane protein LrgB	NA	NA	NA	NA	NA
VDZ16278.1|279521_280490_+	nitric oxide reductase	NA	NA	NA	NA	NA
VDZ16279.1|280534_281812_+	nitric oxide reductase	NA	NA	NA	NA	NA
VDZ16280.1|282037_282742_-	Transcriptional regulator, GntR family	NA	NA	NA	NA	NA
VDZ16281.1|282890_283682_+	PTS system, N-acetylglucosamine-specific IIA component / PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component	NA	NA	NA	NA	NA
VDZ16282.1|283697_285134_+	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.8	6.3e-30
VDZ16283.1|285517_286279_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
VDZ16284.1|286529_287288_-	Ribokinase	NA	NA	NA	NA	NA
VDZ16285.1|287470_287875_-	Ribose ABC transport system, high affinity permease RbsD	NA	NA	NA	NA	NA
VDZ16286.1|287889_288771_-	sugar transport protein	NA	NA	NA	NA	NA
VDZ16287.1|289002_290001_-	ribose operon repressor, putative	NA	NA	NA	NA	NA
VDZ16288.1|290380_290773_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ16289.1|290900_292277_-	multidrug resistance protein B	NA	NA	NA	NA	NA
VDZ16290.1|292510_293503_+	choloylglycine hydrolase	NA	NA	NA	NA	NA
VDZ16291.1|293828_294776_+	peptidoglycan hydrolase	NA	V5R8R0	Arthrobacter_phage	42.7	2.0e-16
VDZ16292.1|294827_295487_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.0	4.5e-23
VDZ16293.1|295500_296421_-	ABC-2 family transporter protein	NA	NA	NA	NA	NA
VDZ16294.1|296417_297584_-	ABC-2 transporter family protein	NA	NA	NA	NA	NA
VDZ16295.1|297651_299175_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ16296.1|299505_300408_-	staphyloxanthin biosynthesis protein, putative	NA	NA	NA	NA	NA
VDZ16297.1|300646_300940_+	Virulence factor esxA	NA	NA	NA	NA	NA
VDZ16298.1|301022_304052_+	Putative secretion accessory protein EsaA/YueB	NA	NA	NA	NA	NA
VDZ16299.1|304051_304510_+	Putative secretion system component EssA	NA	NA	NA	NA	NA
VDZ16300.1|304481_304724_+	Putative secretion accessory protein EsaB/YukD	NA	NA	NA	NA	NA
VDZ16301.1|304736_306071_+	essB	NA	NA	NA	NA	NA
VDZ16302.1|306092_310523_+	essC	NA	V5UPA0	Mycobacterium_phage	23.6	1.3e-28
VDZ16303.1|310535_311105_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ16304.1|311615_311906_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ16305.1|311918_313181_+|transposase	Bacillus transposase protein	transposase	NA	NA	NA	NA
VDZ16306.1|313193_313607_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ16307.1|313617_314091_+	membrane protein	NA	NA	NA	NA	NA
VDZ16308.1|314105_314480_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ16309.1|314497_314887_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ16310.1|314888_315281_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ16311.1|315511_316279_-|transposase	transposase	transposase	A0A059NT77	Lactococcus_phage	44.6	6.3e-53
VDZ16312.1|316290_317526_-|transposase	transposase	transposase	A0A059NT83	Lactococcus_phage	49.1	3.3e-104
>prophage 2
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	406216	417898	2844405		Staphylococcus_phage(27.27%)	14	NA	NA
VDZ16400.1|406216_407683_+	Inosine-5-monophosphate dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
VDZ16401.1|407707_409249_+	GMP synthase (glutamine-hydrolyzing)	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
VDZ16402.1|409342_410479_-	Integrase	NA	A0A1S5S7K9	Streptococcus_phage	42.5	1.3e-75
VDZ16403.1|410562_410949_-	Helix-turn-helix	NA	U3PIS7	Lactobacillus_phage	41.2	3.8e-06
VDZ16404.1|411081_411318_+	phage regulatory protein	NA	Q38329	Lactococcus_phage	40.0	3.2e-08
VDZ16405.1|411318_411579_+	pathogenicity island protein	NA	NA	NA	NA	NA
VDZ16406.1|411625_411772_+	hypothetical bovine pathogenicity island protein	NA	NA	NA	NA	NA
VDZ16407.1|411764_411989_+	pathogenicity island protein	NA	A0A1W6JPA6	Staphylococcus_phage	61.8	1.5e-15
VDZ16408.1|411989_412289_+	bovine pathogenicity island protein Orf16	NA	Q4ZE75	Staphylococcus_phage	66.7	5.9e-31
VDZ16409.1|412380_414744_+	primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	39.3	7.5e-137
VDZ16410.1|415403_415748_+	pathogenicity island protein	NA	A0A1W6JQD5	Staphylococcus_phage	65.2	5.5e-41
VDZ16411.1|415972_416179_+	pathogenicity island protein	NA	NA	NA	NA	NA
VDZ16412.1|416165_417224_+	pahtogenicity island protein	NA	A0A0K2CZ99	Paenibacillus_phage	26.6	3.6e-14
VDZ16413.1|417406_417898_+	pathogenicity island protein	NA	A0A2H4JB26	uncultured_Caudovirales_phage	39.9	3.0e-24
>prophage 3
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	741785	749606	2844405		Hokovirus(16.67%)	10	NA	NA
VDZ16702.1|741785_742841_-	Sensor histidine protein kinase SaeS (exoprotein expression protein S)	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
VDZ16703.1|742840_743527_-	Response regulator SaeR	NA	NA	NA	NA	NA
VDZ16704.1|743501_743975_-	DoxX family protein	NA	NA	NA	NA	NA
VDZ16705.1|744317_744758_-	lipoprotein	NA	NA	NA	NA	NA
VDZ16706.1|745037_745622_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ16707.1|745720_746434_-	Queuosine Biosynthesis QueE Radical SAM	NA	A0A1U9WRB6	Streptococcus_virus	42.7	9.3e-51
VDZ16708.1|746437_746857_-	6-pyruvoyl-tetrahydropterin synthase	NA	S4U060	uncultured_phage	28.7	6.3e-07
VDZ16709.1|746858_747527_-	Queuosine Biosynthesis QueC ATPase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
VDZ16710.1|747877_748471_+	Para-aminobenzoate synthase, amidotransferase component PabAb	NA	A0A0P0IKJ1	Acinetobacter_phage	42.4	3.7e-37
VDZ16711.1|748454_749606_+	Para-aminobenzoate synthetase component I	NA	S4VNU7	Pandoravirus	36.1	1.2e-23
>prophage 4
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	761578	773845	2844405		uncultured_Caudovirales_phage(50.0%)	11	NA	NA
VDZ16721.1|761578_762634_+	histidinol-phosphate aminotransferase	NA	A0A1X6WGT4	Pacmanvirus	26.4	1.8e-21
VDZ16722.1|762794_763337_+	5'-3'-deoxyribonucleotidase, putative	NA	NA	NA	NA	NA
VDZ16723.1|763729_764647_-	Transcription regulator (contains diacylglycerol kinase catalytic domain)	NA	A0A1V0SBJ0	Catovirus	22.4	6.2e-07
VDZ16724.1|764916_766422_-	Di/tripeptide permease YjdL	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
VDZ16725.1|766759_767260_-	NADPH dependent preQ0 reductase	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
VDZ16726.1|767279_768146_-	Integral membrane domain protein	NA	NA	NA	NA	NA
VDZ16727.1|768946_769345_+	Nrdi	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
VDZ16728.1|769307_771413_+	ribonucleotide-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.6	0.0e+00
VDZ16729.1|771532_772504_+	ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
VDZ16730.1|772545_772728_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ16731.1|772873_773845_+	FatD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	80.2	7.8e-141
>prophage 5
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	824538	834560	2844405	transposase	Lactococcus_phage(42.86%)	10	NA	NA
VDZ16775.1|824538_825843_+	enolase	NA	W6LP63	Streptococcus_phage	80.7	6.7e-196
VDZ16776.1|826193_826652_+	membrane spanning protein	NA	NA	NA	NA	NA
VDZ16777.1|826718_826952_+	protein translocase subunit	NA	NA	NA	NA	NA
VDZ16778.1|827067_827808_+	Carboxylesterase	NA	NA	NA	NA	NA
VDZ16779.1|827841_830214_+	3'-to-5' exoribonuclease RNase R	NA	Q0GXV6	Lactococcus_phage	39.0	6.6e-93
VDZ16780.1|830235_830700_+	tmRNA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	100.0	1.5e-81
VDZ16781.1|831628_832042_-	putative lipoprotein	NA	H9A0X8	Staphylococcus_phage	42.0	1.8e-09
VDZ16782.1|832097_832865_-|transposase	transposase	transposase	A0A059NT77	Lactococcus_phage	44.6	6.3e-53
VDZ16783.1|832876_834112_-|transposase	transposase	transposase	A0A059NT83	Lactococcus_phage	49.1	3.3e-104
VDZ16784.1|834209_834560_-	putative lipoprotein	NA	Q4ZAM2	Staphylococcus_virus	39.3	1.3e-08
>prophage 6
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	949367	993184	2844405	protease,transposase,tRNA	Lactococcus_phage(33.33%)	41	NA	NA
VDZ16900.1|949367_949940_+|transposase	putative transposase	transposase	A0ZS58	Staphylococcus_virus	100.0	8.1e-05
VDZ16901.1|949965_950955_-|tRNA	Tryptophanyl-tRNA synthetase; proteobacterial type	tRNA	NA	NA	NA	NA
VDZ16902.1|951249_951645_+	arsenate reductase family protein	NA	NA	NA	NA	NA
VDZ16903.1|951856_952342_+|transposase	IS605/IS200-like transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
VDZ16904.1|952757_953477_+	Negative regulator of genetic competence MecA	NA	NA	NA	NA	NA
VDZ16905.1|953597_954584_+	Competence protein CoiA	NA	NA	NA	NA	NA
VDZ16906.1|954631_956440_+	Oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
VDZ16907.1|956899_957706_-	putative dithiol-disulfide isomerase	NA	NA	NA	NA	NA
VDZ16908.1|957728_958094_-	bacterial globin-like protein	NA	NA	NA	NA	NA
VDZ16909.1|958197_958791_-	Adenylate cyclase	NA	NA	NA	NA	NA
VDZ16910.1|958976_959324_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ16911.1|959340_959976_+	GTP pyrophosphokinase	NA	NA	NA	NA	NA
VDZ16912.1|959992_960802_+	NAD kinase	NA	NA	NA	NA	NA
VDZ16913.1|960798_961653_+	ribosomal large subunit pseudouridine synthase D	NA	NA	NA	NA	NA
VDZ16914.1|961673_963059_+	putative divalent cation transport protein	NA	NA	NA	NA	NA
VDZ16915.1|963068_964913_+	Na+/H+ antiporter-like protein	NA	NA	NA	NA	NA
VDZ16916.1|965190_965961_+	enoyl-ACP reductase	NA	NA	NA	NA	NA
VDZ16917.1|966157_967243_-	membrane protein	NA	NA	NA	NA	NA
VDZ16918.1|967584_969153_+	Sodium/proton-dependent alanine carrier protein	NA	NA	NA	NA	NA
VDZ16919.1|969297_970056_+	Acetyl esterase	NA	NA	NA	NA	NA
VDZ16920.1|970249_970759_+	2-5 RNA ligase	NA	NA	NA	NA	NA
VDZ16921.1|970871_972062_-	glycolipid permease ltaA	NA	NA	NA	NA	NA
VDZ16922.1|972039_973215_-	diglucosyldiacylglycerol synthase (LTA membrane anchor synthesis)	NA	NA	NA	NA	NA
VDZ16923.1|973647_975132_+	UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
VDZ16924.1|975121_975373_+	yueH-like family protein	NA	NA	NA	NA	NA
VDZ16925.1|975372_976935_+	Peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
VDZ16926.1|977236_978040_+	Tellurite resistance protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
VDZ16927.1|978273_979815_+|protease	protease	protease	NA	NA	NA	NA
VDZ16928.1|979847_980582_+	Endopeptidase degP	NA	W5SAB9	Pithovirus	28.4	7.5e-11
VDZ16929.1|980598_981957_+	KtrB	NA	NA	NA	NA	NA
VDZ16930.1|982092_983607_+	2,3-cyclic-nucleotide 2-phosphodiesterase	NA	NA	NA	NA	NA
VDZ16931.1|984095_984665_-	Competence transcription factor	NA	NA	NA	NA	NA
VDZ16932.1|984874_985093_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VDZ16933.1|985173_986160_-	Lipoate-protein ligase A	NA	NA	NA	NA	NA
VDZ16934.1|986358_986535_+	putative DUF2187-containing protein	NA	NA	NA	NA	NA
VDZ16935.1|986549_987152_+|protease	metal-dependent membrane protease	protease	NA	NA	NA	NA
VDZ16936.1|988411_990376_+	membrane spanning protein	NA	NA	NA	NA	NA
VDZ16937.1|990378_990699_+	putative DUF1093-containing protein	NA	NA	NA	NA	NA
VDZ16938.1|990695_991052_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.3	5.0e-05
VDZ16939.1|991169_992405_+|transposase	transposase	transposase	A0A059NT83	Lactococcus_phage	49.1	3.3e-104
VDZ16940.1|992416_993184_+|transposase	transposase	transposase	A0A059NT77	Lactococcus_phage	44.6	6.3e-53
>prophage 7
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	1024555	1033028	2844405		Synechococcus_phage(33.33%)	9	NA	NA
VDZ16972.1|1024555_1025038_+	AIR carboxylase	NA	A0A2P0VNU7	Tetraselmis_virus	44.0	4.0e-21
VDZ16973.1|1025024_1026149_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	NA	NA	NA	NA
VDZ16974.1|1026152_1026857_+	Phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	41.6	3.6e-47
VDZ16975.1|1026856_1027120_+	Phosphoribosylformylglycinamidine synthase, PurS subunit	NA	NA	NA	NA	NA
VDZ16976.1|1027121_1027793_+	Phosphoribosylformylglycinamidine synthase	NA	NA	NA	NA	NA
VDZ16977.1|1027785_1029975_+	Phosphoribosylformylglycinamidine synthase, synthetase subunit	NA	A6N228	Microbacterium_phage	39.8	4.6e-141
VDZ16978.1|1029953_1031438_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
VDZ16979.1|1031430_1032459_+	Phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
VDZ16980.1|1032461_1033028_+	Phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.7	5.5e-30
>prophage 8
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	1233340	1302250	2844405	transposase,head,protease,tRNA	Staphylococcus_phage(23.81%)	62	NA	NA
VDZ17171.1|1233340_1234627_+|protease	Membrane-associated zinc metalloprotease	protease	NA	NA	NA	NA
VDZ17172.1|1234646_1235456_+|tRNA	Prolyl-tRNA synthetase	tRNA	NA	NA	NA	NA
VDZ17173.1|1235440_1236349_+|tRNA	Prolyl-tRNA synthetase	tRNA	NA	NA	NA	NA
VDZ17174.1|1236606_1240923_+	DNA polymerase III subunit alpha	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
VDZ17175.1|1241210_1241678_+	Putative cytosolic protein	NA	NA	NA	NA	NA
VDZ17176.1|1241698_1242874_+	Transcription termination protein NusA	NA	NA	NA	NA	NA
VDZ17177.1|1242894_1243179_+	nucleic-acid-binding protein implicated in transcription termination	NA	NA	NA	NA	NA
VDZ17178.1|1243175_1243493_+	ribosomal protein L7Ae family protein	NA	NA	NA	NA	NA
VDZ17179.1|1243497_1245615_+	protein translation initiation factor 2 (IF-2)	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.1	2.4e-25
VDZ17180.1|1246000_1246351_+	ribosome-binding factor A	NA	NA	NA	NA	NA
VDZ17181.1|1246519_1247437_+|tRNA	tRNA pseudouridine synthase B	tRNA	NA	NA	NA	NA
VDZ17182.1|1247451_1248423_+	Riboflavin kinase / FMN adenylyltransferase	NA	A0A1V0SJE1	Klosneuvirus	32.1	1.7e-07
VDZ17183.1|1248537_1248807_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
VDZ17184.1|1251508_1253182_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
VDZ17185.1|1253438_1255808_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.5	1.3e-83
VDZ17186.1|1255812_1256526_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
VDZ17187.1|1256556_1257822_+|protease	Zinc protease	protease	A0A1X9I714	Streptococcus_phage	26.8	5.4e-41
VDZ17188.1|1257821_1259108_+	peptidase, M16 family	NA	G3MBJ8	Bacillus_virus	28.4	7.9e-16
VDZ17189.1|1259107_1259812_+	3-oxoacyl-[acyl-carrier protein] reductase	NA	NA	NA	NA	NA
VDZ17190.1|1259916_1260744_+	protein with ACT domain	NA	NA	NA	NA	NA
VDZ17191.1|1260762_1261155_+	DNA-binding protein	NA	NA	NA	NA	NA
VDZ17192.1|1261188_1261767_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
VDZ17193.1|1261991_1263143_+	Competence/damage-inducible protein CinA	NA	NA	NA	NA	NA
VDZ17194.1|1263307_1264351_+	recombinase A	NA	A0A0S2MVG1	Bacillus_phage	69.2	9.3e-124
VDZ17195.1|1264704_1266264_+	Hydrolase (HAD superfamily)	NA	NA	NA	NA	NA
VDZ17196.1|1266517_1267201_-|transposase	putative transposase	transposase	A0ZS58	Staphylococcus_virus	93.8	1.1e-120
VDZ17197.1|1267250_1267343_-	Transposase	NA	A0A146ICT8	Staphylococcus_phage	93.1	1.6e-08
VDZ17198.1|1267339_1267672_-|transposase	transposase	transposase	Q9MBP7	Staphylococcus_prophage	92.4	2.2e-26
VDZ17199.1|1268008_1268224_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ17200.1|1268397_1269195_+	Phosphoesterase family protein	NA	NA	NA	NA	NA
VDZ17201.1|1269334_1271095_+	2-oxoacid ferredoxin oxidoreductase subunit alpha	NA	NA	NA	NA	NA
VDZ17202.1|1271095_1271962_+	2-oxoglutarate oxidoreductase, beta subunit	NA	NA	NA	NA	NA
VDZ17203.1|1272055_1272349_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VDZ17204.1|1272482_1274027_+|tRNA	tRNA-i(6)A37 methylthiotransferase	tRNA	NA	NA	NA	NA
VDZ17205.1|1274027_1274393_+	membrane protein	NA	NA	NA	NA	NA
VDZ17206.1|1274419_1274911_+	Substrate-specific component ThiWthiazole ECF transporter	NA	NA	NA	NA	NA
VDZ17207.1|1275213_1277832_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	8.5e-41
VDZ17208.1|1277844_1279854_+	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	29.5	5.3e-59
VDZ17209.1|1279868_1280402_+	glycerol uptake operon antiterminator regulatory protein	NA	NA	NA	NA	NA
VDZ17210.1|1280866_1281685_+	Glycerol uptake facilitator protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	2.4e-26
VDZ17211.1|1281813_1283310_+	glycerol kinase	NA	NA	NA	NA	NA
VDZ17212.1|1283467_1285141_+	Glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
VDZ17213.1|1285287_1286205_+	hydrolase	NA	NA	NA	NA	NA
VDZ17214.1|1286222_1287158_+|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	tRNA	NA	NA	NA	NA
VDZ17215.1|1287172_1287406_+	RNA-binding protein Hfq	NA	NA	NA	NA	NA
VDZ17216.1|1287627_1288104_-	Glutathione peroxidase family protein	NA	Q70H87	Fowlpox_virus	38.0	1.2e-22
VDZ17217.1|1288215_1289454_+	GTP-binding protein	NA	NA	NA	NA	NA
VDZ17218.1|1289472_1290711_+	aluminum resistance protein, putative	NA	NA	NA	NA	NA
VDZ17219.1|1290954_1291323_+	FemC, factor involved in methicillin resistance / Glutamine synthetase repressor	NA	NA	NA	NA	NA
VDZ17220.1|1291341_1292682_+	glutamine synthetase	NA	NA	NA	NA	NA
VDZ17221.1|1293956_1294046_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ17222.1|1294072_1294285_+	Uncharacterised protein	NA	A0A1W6JNK0	Staphylococcus_phage	71.0	3.1e-18
VDZ17223.1|1294578_1294785_+	Uncharacterised protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
VDZ17224.1|1296023_1296209_+	Uncharacterised protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
VDZ17225.1|1296720_1296825_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ17226.1|1296953_1297205_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ17227.1|1297250_1297538_+|head	putative phage head morphogenesis protein	head	A0A1W6JNH6	Staphylococcus_phage	71.7	2.5e-18
VDZ17228.1|1297517_1298285_-|transposase	transposase	transposase	A0A059NT77	Lactococcus_phage	44.6	6.3e-53
VDZ17229.1|1298296_1299532_-|transposase	transposase	transposase	A0A059NT83	Lactococcus_phage	49.1	3.3e-104
VDZ17230.1|1299665_1300037_+|head	putative phage head morphogenesis protein	head	NA	NA	NA	NA
VDZ17231.1|1300157_1300406_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ17232.1|1300984_1302250_+	reverse transcriptase	NA	A0A0U4J920	Pseudomonas_phage	28.7	2.3e-28
>prophage 9
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	1497352	1586098	2844405	terminase,holin,protease,capsid,portal,integrase,tRNA,head,tail	Staphylococcus_phage(79.01%)	107	1507548:1507565	1582161:1582178
VDZ17401.1|1497352_1498645_-|tRNA	asparaginyl-tRNA synthetase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	4.3e-54
VDZ17402.1|1498966_1501660_-	dinG family ATP-dependent helicase YoaA	NA	A0A1X9I5C8	Streptococcus_phage	34.4	3.7e-47
VDZ17403.1|1501683_1502655_-	Biotin-protein ligase / Biotin operon repressor	NA	NA	NA	NA	NA
VDZ17404.1|1502641_1503844_-	poly A polymerase family protein	NA	H7BUW3	unidentified_phage	43.3	1.9e-35
VDZ17405.1|1503848_1504991_-	glycosyl transferase	NA	NA	NA	NA	NA
VDZ17406.1|1505228_1505546_-	Pyrophosphohydrolase, MazG family	NA	NA	NA	NA	NA
VDZ17407.1|1505882_1506581_-	Neutral zinc metallopeptidase family	NA	NA	NA	NA	NA
VDZ17408.1|1506634_1507222_-	membrane protein	NA	NA	NA	NA	NA
VDZ17409.1|1507211_1507799_-	Putative cytosolic protein	NA	G3MAV7	Bacillus_virus	26.7	8.0e-08
1507548:1507565	attL	ATTCATTAACTTTATATT	NA	NA	NA	NA
VDZ17410.1|1507800_1509045_-	TPR-repeat-containing protein, putative component of Menaquinone-cytochrome C reductase	NA	NA	NA	NA	NA
VDZ17411.1|1509051_1510350_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
VDZ17412.1|1510359_1511424_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
VDZ17413.1|1511449_1512616_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	2.0e-34
VDZ17414.1|1513002_1513203_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ17415.1|1513412_1513862_-	Nucleoside diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
VDZ17416.1|1513953_1514913_-	Farnesyl pyrophosphate synthetase	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
VDZ17417.1|1514914_1515640_-	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE	NA	NA	NA	NA	NA
VDZ17418.1|1515642_1516215_-	heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 family protein	NA	NA	NA	NA	NA
VDZ17419.1|1516645_1516918_-	DNA-binding protein II HBsu	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
VDZ17420.1|1517135_1518086_-	Glycerol-3-phosphate dehydrogenase (NAD(P)+)	NA	NA	NA	NA	NA
VDZ17421.1|1518102_1519413_-	GTP-binding protein EngA	NA	NA	NA	NA	NA
VDZ17422.1|1519634_1520810_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
VDZ17423.1|1521521_1522181_-	Cytidylate kinase	NA	NA	NA	NA	NA
VDZ17424.1|1522257_1523226_+	L-asparaginase	NA	NA	NA	NA	NA
VDZ17425.1|1523358_1524021_-	thioredoxin reductase	NA	NA	NA	NA	NA
VDZ17426.1|1524236_1524326_-	thioredoxin reductase	NA	NA	NA	NA	NA
VDZ17427.1|1524728_1526180_-	elastin binding protein ebpS	NA	NA	NA	NA	NA
VDZ17428.1|1526332_1527712_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.3	6.4e-56
VDZ17429.1|1527701_1528655_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ17430.1|1528762_1529011_+	Ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
VDZ17431.1|1529116_1529662_-	riboflavin transporter	NA	NA	NA	NA	NA
VDZ17432.1|1530063_1530951_-	putative lipoprotein	NA	NA	NA	NA	NA
VDZ17433.1|1531479_1532310_-	Putative cytosolic protein	NA	NA	NA	NA	NA
VDZ17434.1|1532444_1532591_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ17435.1|1532574_1533450_-	lipoprotein	NA	NA	NA	NA	NA
VDZ17436.1|1533600_1533948_-	lipoprotein	NA	Q4ZCJ7	Staphylococcus_virus	98.2	1.5e-25
VDZ17437.1|1533994_1535005_-	BcgI-like restriction enzyme subunit beta	NA	A0A1W6JNN3	Staphylococcus_phage	41.3	2.7e-64
VDZ17438.1|1534991_1536896_-	BcgI-like restriction enzyme subunit alpha	NA	A0A1W6JNK1	Staphylococcus_phage	84.5	0.0e+00
VDZ17439.1|1537256_1538012_-	Autolysin	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
VDZ17440.1|1538023_1538278_-|holin	Phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
VDZ17441.1|1538818_1539118_-	hypothetical phage-related protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
VDZ17442.1|1539163_1539328_-	phage protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
VDZ17443.1|1539320_1539710_-	phage protein	NA	A0A2I6PER1	Staphylococcus_phage	99.2	4.9e-62
VDZ17444.1|1539709_1540399_-|tail	putative phage tail protein	tail	A0A2I6PES7	Staphylococcus_phage	100.0	1.4e-128
VDZ17445.1|1540398_1541175_-|tail	putative phage tail protein	tail	A0A2I6PES7	Staphylococcus_phage	98.4	3.4e-131
VDZ17446.1|1541174_1542212_-	putative minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	1.1e-206
VDZ17447.1|1542208_1543084_-	putative minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	99.3	4.2e-154
VDZ17448.1|1543099_1543390_-	putative gp53	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
VDZ17449.1|1543389_1544973_-|tail	prophage endopeptidase tail family protein	tail	A0A2I6PEQ5	Staphylococcus_phage	99.8	3.5e-308
VDZ17450.1|1544981_1545806_-|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	99.6	7.8e-158
VDZ17451.1|1545805_1552006_-	TP901 family prophage L54a	NA	A0A1X9IGU9	Staphylococcus_phage	100.0	0.0e+00
VDZ17452.1|1552019_1552178_-	putative gp49	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
VDZ17453.1|1552219_1552570_-	putative gp48	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
VDZ17454.1|1552627_1553083_-|tail	major tail protein	tail	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
VDZ17455.1|1553174_1553816_-|tail	major tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
VDZ17456.1|1553850_1554246_-	phage protein	NA	A0A2I6PEQ4	Staphylococcus_phage	100.0	8.8e-67
VDZ17457.1|1554246_1554648_-	putative phiSLT protein	NA	A0A2I6PF54	Staphylococcus_phage	100.0	8.1e-68
VDZ17458.1|1554644_1554977_-	phage protein	NA	A0A2I6PES3	Staphylococcus_phage	100.0	4.1e-57
VDZ17459.1|1554988_1555267_-|head,tail	phage gp6-like head-tail connector family protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
VDZ17460.1|1555335_1556499_-|capsid	putative phage capsid protein	capsid	A0A2I6PEQ3	Staphylococcus_phage	99.7	2.1e-217
VDZ17461.1|1556510_1557284_-|protease	phage protease	protease	A0A2I6PEQ7	Staphylococcus_phage	100.0	2.4e-137
VDZ17462.1|1557267_1558506_-|portal	portal protein	portal	A0A2I6PER5	Staphylococcus_phage	100.0	6.9e-235
VDZ17463.1|1558510_1560202_-|terminase	terminase large subunit	terminase	A0A1X9IGU0	Staphylococcus_phage	99.8	0.0e+00
VDZ17464.1|1560191_1560497_-|terminase	Phage terminase small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
VDZ17465.1|1560625_1560940_-	HNH endonuclease family protein	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
VDZ17466.1|1561096_1561534_-	phage regulatory protein	NA	A0A2I6PDC2	Staphylococcus_phage	100.0	4.6e-77
VDZ17467.1|1561546_1562905_-	putative DNA helicase	NA	A0A1X9IH01	Staphylococcus_phage	99.8	1.8e-260
VDZ17468.1|1562894_1563185_-	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
VDZ17469.1|1563525_1565973_-	E family protein	NA	R4WAL1	Staphylococcus_phage	100.0	0.0e+00
VDZ17470.1|1566024_1566225_-	putative exported phage protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
VDZ17471.1|1566292_1566448_-	transcriptional activator rinB-like protein	NA	A7TWI2	Staphylococcus_phage	94.0	1.5e-17
VDZ17472.1|1566444_1566831_-	phage membrane protein	NA	A7TWI1	Staphylococcus_phage	98.4	3.4e-63
VDZ17473.1|1566820_1567057_-	phage protein	NA	A7TWB3	Staphylococcus_phage	100.0	1.9e-37
VDZ17474.1|1567081_1567318_-	phage protein	NA	C8CH06	Staphylococcus_phage	98.7	3.1e-35
VDZ17475.1|1567354_1567882_-	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	A7TWB1	Staphylococcus_phage	100.0	7.8e-95
VDZ17476.1|1567874_1568123_-	Phage protein	NA	Q9B0F3	Staphylococcus_virus	97.6	2.7e-37
VDZ17477.1|1568137_1568380_-	phage family protein	NA	A0A2D1G5G2	Staphylococcus_phage	97.5	2.8e-39
VDZ17478.1|1568394_1568595_-	phage protein	NA	A0A2I6PEM3	Staphylococcus_phage	100.0	2.5e-30
VDZ17479.1|1568597_1568855_-	phage protein	NA	A0A2I6PEN5	Staphylococcus_phage	100.0	2.6e-43
VDZ17480.1|1568854_1569256_-	putative phi PVL-like protein	NA	A0A2I6PF14	Staphylococcus_phage	98.5	3.6e-68
VDZ17481.1|1569255_1569441_-	phage protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
VDZ17482.1|1569453_1571415_-	DNA polymerase	NA	Q4ZCP5	Staphylococcus_virus	99.4	0.0e+00
VDZ17483.1|1571474_1572029_-	phage protein	NA	M9QRS1	Staphylococcus_phage	100.0	1.4e-99
VDZ17484.1|1572054_1573221_-	PD-(D/E)XK nuclease superfamily protein	NA	R4WAL0	Staphylococcus_phage	99.7	7.0e-221
VDZ17485.1|1573217_1573580_-	phage protein	NA	Q4ZCP8	Staphylococcus_virus	100.0	2.2e-56
VDZ17486.1|1573594_1573777_-	phage protein	NA	A0A2I6PDL5	Staphylococcus_phage	98.3	2.2e-25
VDZ17487.1|1573728_1573917_-	phage protein	NA	A0A2I6PDL5	Staphylococcus_phage	93.5	2.0e-16
VDZ17488.1|1573995_1574157_-	phage protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
VDZ17489.1|1574169_1574433_-	DNA-binding protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
VDZ17490.1|1574457_1574673_-	phage protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
VDZ17491.1|1574727_1575093_+	phage protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
VDZ17492.1|1575061_1575307_-	phage protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
VDZ17493.1|1575373_1575754_+	phage protein	NA	Q4ZCQ5	Staphylococcus_virus	100.0	5.8e-68
VDZ17494.1|1575740_1575938_-	phage protein	NA	A7TWF5	Staphylococcus_phage	100.0	4.6e-24
VDZ17495.1|1576007_1576220_+	putative uracil-DNA glycosylase	NA	D2JGJ1	Staphylococcus_phage	100.0	7.6e-33
VDZ17496.1|1576260_1576410_-	phage protein	NA	D2JGJ0	Staphylococcus_phage	100.0	1.4e-20
VDZ17497.1|1576424_1576868_-	hypothetical phage-related protein	NA	A7TWF2	Staphylococcus_phage	100.0	8.9e-76
VDZ17498.1|1576915_1577128_-	helix-turn-helix family protein	NA	A7TWF1	Staphylococcus_phage	100.0	1.6e-30
VDZ17499.1|1577279_1578011_+	helix-turn-helix family protein	NA	S4SVC5	Staphylococcus_phage	99.2	1.3e-132
VDZ17500.1|1578081_1578264_+	Putative cytosolic protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
VDZ17501.1|1578322_1578448_+	ORF136	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	3.3e-12
VDZ17502.1|1578444_1579059_-	phi PVL ORF 30-like protein	NA	M9QRQ8	Staphylococcus_phage	99.5	2.5e-105
VDZ17503.1|1579184_1580390_+|integrase	integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
VDZ17504.1|1580432_1582469_-	lipoprotein	NA	B5WZK7	Staphylococcus_phage	53.7	4.0e-54
1582161:1582178	attR	ATTCATTAACTTTATATT	NA	NA	NA	NA
VDZ17505.1|1582471_1583389_-	putative lipoprotein	NA	NA	NA	NA	NA
VDZ17506.1|1583640_1585392_-	ResE	NA	A0A1V0SGX0	Hokovirus	33.6	1.3e-21
VDZ17507.1|1585372_1586098_-	transcriptional regulator srrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
>prophage 10
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	1641216	1649546	2844405	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
VDZ17568.1|1641216_1642002_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
VDZ17569.1|1642127_1643018_-	endonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
VDZ17570.1|1643027_1644374_-	ATP-dependent RNA helicase YqfR	NA	A0A1V0SIR5	Klosneuvirus	33.7	9.1e-55
VDZ17571.1|1644487_1645588_-	NIF3 protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
VDZ17572.1|1645590_1646268_-|tRNA	Putative tRNA-m1A22 methylase	tRNA	NA	NA	NA	NA
VDZ17573.1|1646398_1647505_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
VDZ17574.1|1647728_1649546_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.1	2.3e-53
>prophage 11
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	1718988	1728031	2844405	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
VDZ17647.1|1718988_1719507_-	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
VDZ17648.1|1719528_1721802_-	Single-stranded-DNA-specific exonuclease recJ	NA	A7KV88	Bacillus_phage	29.0	3.1e-63
VDZ17649.1|1722004_1724284_-	Protein-export membrane protein secD / Protein-export membrane protein secF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
VDZ17650.1|1724558_1724819_-	Preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
VDZ17651.1|1724837_1725977_-|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
VDZ17652.1|1725999_1727025_-|tRNA	S-adenosylmethionine--tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
VDZ17653.1|1727026_1728031_-	Holliday junction DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 12
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	1765098	1772150	2844405		Bacillus_virus(16.67%)	7	NA	NA
VDZ17691.1|1765098_1765971_-	Formamidopyrimidine-DNA glycosylase	NA	G3MA33	Bacillus_virus	38.2	2.0e-42
VDZ17692.1|1765986_1767468_-	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	3.4e-47
VDZ17693.1|1767479_1768082_-	DNA polymerase I	NA	A0A1C3NF50	Phage_NCTB	33.6	1.2e-06
VDZ17694.1|1768102_1768615_-	DNA polymerase I	NA	A0A218MKA5	uncultured_virus	32.5	8.9e-11
VDZ17695.1|1768908_1770396_-	glucosyltransferase	NA	NA	NA	NA	NA
VDZ17696.1|1770894_1771203_-	Phosphate regulon sensor protein PhoR	NA	Q8QNA2	Ectocarpus_siliculosus_virus	34.7	2.3e-06
VDZ17697.1|1771196_1772150_-	Phosphate regulon sensor protein PhoR	NA	W8CYF6	Bacillus_phage	43.5	3.8e-07
>prophage 13
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	1850982	1905054	2844405	protease,transposase,tRNA	Staphylococcus_phage(88.37%)	54	NA	NA
VDZ17762.1|1850982_1857552_-	putative surface anchored protein	NA	A0A2H4PQU6	Staphylococcus_phage	92.6	1.9e-294
VDZ17763.1|1857877_1858189_-	Rhodanese-like domain protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
VDZ17764.1|1858210_1860628_-|tRNA	Leucyl-tRNA synthetase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.3	0.0e+00
VDZ17765.1|1860915_1862097_-	Multidrug resistance protein	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
VDZ17766.1|1862207_1863161_+	Fe-S oxidoreductase	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
VDZ17767.1|1863157_1863721_+	SAM-dependent methyltransferase, MraW methylase family	NA	A0A2H4PQV0	Staphylococcus_phage	100.0	2.2e-103
VDZ17768.1|1863840_1864242_-	HTH-type transcriptional regulator rot	NA	NA	NA	NA	NA
VDZ17769.1|1864678_1865476_-|transposase	transposase	transposase	A0ZS58	Staphylococcus_virus	89.5	1.1e-108
VDZ17770.1|1865821_1866649_-	Lysophospholipase; Monoglyceride lipase; putative	NA	NA	NA	NA	NA
VDZ17771.1|1866882_1867884_+	Proline dehydrogenase (Proline oxidase)	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
VDZ17772.1|1868005_1868470_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
VDZ17773.1|1868482_1869664_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	100.0	1.7e-227
VDZ17774.1|1869674_1870307_-	Riboflavin synthase alpha chain	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
VDZ17775.1|1870313_1871357_-	5-amino-6-(5-phosphoribosylamino)uracil reductase	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	5.3e-196
VDZ17776.1|1871837_1873340_-	pyridine nucleotide-disulfide oxidoreductase family protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
VDZ17777.1|1873866_1874181_+	arsenical resistance operon repressor 2	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	1.3e-52
VDZ17778.1|1874180_1875473_+	arsenical pump membrane protein	NA	A0A2H4PQU3	Staphylococcus_phage	94.2	7.5e-216
VDZ17779.1|1875490_1875886_+	arsenate reductase, putative	NA	A0A2H4PQT9	Staphylococcus_phage	96.9	4.5e-71
VDZ17780.1|1876515_1877658_-	quinolone resistance protein NorA	NA	NA	NA	NA	NA
VDZ17781.1|1878049_1878514_-	ftsk/spoiiie family protein	NA	NA	NA	NA	NA
VDZ17782.1|1879149_1880004_-	peptidoglycan endo-beta-N-acetylglucosaminidase	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
VDZ17783.1|1880279_1880504_-	putative staphylococcal protein	NA	NA	NA	NA	NA
VDZ17784.1|1880702_1881173_+	DNA-binding protein	NA	A0A2H4PQT5	Staphylococcus_phage	83.9	1.8e-66
VDZ17785.1|1881285_1881729_+	comK family protein	NA	NA	NA	NA	NA
VDZ17786.1|1881715_1882159_-	membrane protein	NA	A0A2H4PQT8	Staphylococcus_phage	77.2	1.9e-49
VDZ17787.1|1882456_1883092_+|protease	CAAX amino terminal protease family protein	protease	NA	NA	NA	NA
VDZ17788.1|1883258_1883879_+	membrane protein	NA	NA	NA	NA	NA
VDZ17789.1|1884275_1884989_-	Transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
VDZ17790.1|1885247_1885550_+	membrane protein	NA	NA	NA	NA	NA
VDZ17791.1|1885805_1886171_+	CrcB family protein	NA	A0A2H4PQR0	Staphylococcus_phage	99.2	4.8e-59
VDZ17792.1|1886167_1886521_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	82.9	1.9e-20
VDZ17793.1|1887364_1887733_+|transposase	transposase	transposase	Q9MBP7	Staphylococcus_prophage	94.9	1.2e-33
VDZ17794.1|1887729_1887822_+	Transposase	NA	A0A146ICT8	Staphylococcus_phage	93.1	1.6e-08
VDZ17795.1|1887871_1888168_+|transposase	transposase (fragment)	transposase	A0A146ICT8	Staphylococcus_phage	100.0	4.1e-53
VDZ17796.1|1888243_1888555_+|transposase	putative transposase	transposase	Q9MBP7	Staphylococcus_prophage	94.2	1.4e-48
VDZ17797.1|1888617_1889451_-	aldo/keto reductase family protein	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	6.0e-158
VDZ17798.1|1889667_1890576_-	Uncharacterised protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	2.9e-137
VDZ17799.1|1890700_1891894_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	2.2e-217
VDZ17800.1|1892264_1893857_+	phosphoenolpyruvate carboxykinase	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
VDZ17801.1|1894234_1895005_-	Dipeptidyl aminopeptidase/acylaminoacyl-peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	97.6	8.0e-141
VDZ17802.1|1894985_1895465_-	phosphohydrolase	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	1.1e-84
VDZ17803.1|1895524_1895782_+	Putative cytosolic protein	NA	A0A2H4PQM5	Staphylococcus_phage	90.6	2.0e-40
VDZ17804.1|1895778_1896780_-	O-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.9	2.8e-186
VDZ17805.1|1896784_1898263_-	O-succinylbenzoic acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	1.6e-283
VDZ17806.1|1898421_1898904_-	putative lipoprotein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.8e-80
VDZ17807.1|1899606_1899828_+	excalibur domain protein	NA	A0A2H4PQM8	Staphylococcus_phage	100.0	7.2e-18
VDZ17808.1|1899908_1900904_+	Telomeric repeat-binding factor 2	NA	A0A2H4PQN2	Staphylococcus_phage	95.2	1.9e-70
VDZ17809.1|1900979_1901606_+	lipoprotein	NA	A0A2H4PQM7	Staphylococcus_phage	91.8	6.4e-88
VDZ17810.1|1901646_1901988_+	Uncharacterised protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.9	2.5e-54
VDZ17811.1|1902088_1902661_+	Uncharacterised protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	7.8e-24
VDZ17812.1|1902857_1903427_-	Domain of uncharacterised function (DUF955)	NA	A0A2H4PQN8	Staphylococcus_phage	95.0	1.2e-77
VDZ17813.1|1903799_1903976_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ17814.1|1903986_1904370_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ17815.1|1904949_1905054_-|transposase	putative transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	87.5	7.2e-05
>prophage 14
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	1912346	1919686	2844405	transposase	Staphylococcus_phage(66.67%)	8	NA	NA
VDZ17825.1|1912346_1913153_+|transposase	transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.9	1.1e-76
VDZ17826.1|1913254_1913830_+	Domain of uncharacterised function DUF1829	NA	NA	NA	NA	NA
VDZ17827.1|1914381_1915158_-	extracellular enterotoxin type G precursor	NA	NA	NA	NA	NA
VDZ17828.1|1915440_1916196_-	enterotoxin SeN	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
VDZ17829.1|1916234_1917005_-	enterotoxin Seu	NA	A0A097PAT7	Streptococcus_pyogenes_phage	43.6	6.3e-45
VDZ17830.1|1917158_1917887_-	extracellular enterotoxin type I precursor	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
VDZ17831.1|1917921_1918641_-	enterotoxin SEM	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
VDZ17832.1|1918921_1919686_-	enterotoxin SeO	NA	A0A1X9H080	Staphylococcus_phage	37.1	2.3e-31
>prophage 15
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	1953171	2018046	2844405	protease,transposase,tRNA	Bacillus_phage(21.43%)	56	NA	NA
VDZ17863.1|1953171_1953453_+|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	64.5	6.5e-24
VDZ17864.1|1953494_1954301_+|transposase	transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.9	1.1e-76
VDZ17865.1|1954280_1954733_-|transposase	transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	2.7e-19
VDZ17866.1|1963512_1963959_-	Peroxide stress regulator PerR, FUR family	NA	NA	NA	NA	NA
VDZ17867.1|1964055_1965015_-	D-3-phosphoglycerate dehydrogenase	NA	NA	NA	NA	NA
VDZ17868.1|1965011_1965467_-	Thiol peroxidase, Bcp-type	NA	NA	NA	NA	NA
VDZ17869.1|1965547_1966837_+	Glutamate-1-semialdehyde aminotransferase	NA	NA	NA	NA	NA
VDZ17870.1|1967078_1968224_+	integral membrane protein	NA	NA	NA	NA	NA
VDZ17871.1|1968414_1970151_-	Lipid A export ATP-binding/permease protein MsbA	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
VDZ17872.1|1970442_1970985_-	Putative cytosolic protein	NA	NA	NA	NA	NA
VDZ17873.1|1971286_1972324_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
VDZ17874.1|1972475_1973453_+	membrane-bound metal-dependent hydrolase	NA	NA	NA	NA	NA
VDZ17875.1|1973713_1974550_-	Teichoic acid translocation permease protein TagG	NA	NA	NA	NA	NA
VDZ17876.1|1974558_1976076_-	Teichoic acid export ATP-binding protein TagH	NA	NA	NA	NA	NA
VDZ17877.1|1976090_1976405_-	transcriptional regulator	NA	NA	NA	NA	NA
VDZ17878.1|1976382_1977201_-	Regulatory protein recX	NA	NA	NA	NA	NA
VDZ17879.1|1977461_1978271_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
VDZ17880.1|1978611_1979127_-	ThiJ/PfpI family protein	NA	NA	NA	NA	NA
VDZ17881.1|1979257_1979419_-	Putative cytosolic protein	NA	NA	NA	NA	NA
VDZ17882.1|1979642_1980794_+	Thioredoxin-like oxidoreductase	NA	NA	NA	NA	NA
VDZ17883.1|1981053_1981584_-	acyl-CoA hydrolase	NA	NA	NA	NA	NA
VDZ17884.1|1981673_1982921_-	aminopeptidase PepS	NA	NA	NA	NA	NA
VDZ17885.1|1982932_1983139_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VDZ17886.1|1983279_1983744_+	Low molecular weight protein tyrosine phosphatase	NA	NA	NA	NA	NA
VDZ17887.1|1983750_1984026_+	exported protein	NA	NA	NA	NA	NA
VDZ17888.1|1984303_1985521_+	ribonuclease BN	NA	NA	NA	NA	NA
VDZ17889.1|1985633_1986263_-	Two component transcriptional regulator VraR, LuxR family	NA	W8CYM9	Bacillus_phage	30.8	8.1e-06
VDZ17890.1|1986252_1987296_-	Sensor histidine kinase VraS	NA	NA	NA	NA	NA
VDZ17891.1|1987292_1987994_-	Transporter yvqF	NA	NA	NA	NA	NA
VDZ17892.1|1988008_1988395_-	putative staphylococcal protein	NA	NA	NA	NA	NA
VDZ17893.1|1988611_1989370_-	Methionine aminopeptidase	NA	NA	NA	NA	NA
VDZ17894.1|1989897_1990884_+	Integral membrane protein	NA	NA	NA	NA	NA
VDZ17895.1|1991314_1991728_-	Uncharacterised protein	NA	A0A1Q1PVU5	Staphylococcus_phage	39.1	5.1e-17
VDZ17896.1|1991952_1992684_-	CobB/CobQ-like glutamine amidotransferase domain-containing protein	NA	NA	NA	NA	NA
VDZ17897.1|1992685_1993999_-	UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
VDZ17898.1|1994290_1994791_+	Ferritin-like protein 2	NA	NA	NA	NA	NA
VDZ17899.1|1995179_1995407_+	DNA polymerase III polC-type	NA	M1PFD8	Streptococcus_phage	55.6	8.1e-09
VDZ17900.1|1995403_1995733_+	DNA polymerase III polC-type	NA	NA	NA	NA	NA
VDZ17901.1|1995800_1996871_-	DNA polymerase IV	NA	NA	NA	NA	NA
VDZ17902.1|1997117_1997648_-	Permease	NA	NA	NA	NA	NA
VDZ17903.1|1997817_1999179_-	RNA methyltransferase, TrmA family	NA	A0A1X9I6F4	Streptococcus_phage	43.8	2.4e-103
VDZ17904.1|1999259_2000207_-	Transcription regulator (contains diacylglycerol kinase catalytic domain)	NA	A0A1V0SBJ0	Catovirus	27.8	1.2e-16
VDZ17905.1|2001085_2002513_-|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit B	tRNA	NA	NA	NA	NA
VDZ17906.1|2002525_2003983_-|tRNA	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A	tRNA	NA	NA	NA	NA
VDZ17907.1|2003984_2004287_-|tRNA	Aspartyl-tRNA(Asn) amidotransferase subunit C; Glutamyl-tRNA(Gln) amidotransferase subunit C	tRNA	NA	NA	NA	NA
VDZ17908.1|2004652_2006191_+	Sodium/proline symporter	NA	NA	NA	NA	NA
VDZ17909.1|2006279_2007479_-	Lipoprotein (pheromone precursor)	NA	NA	NA	NA	NA
VDZ17910.1|2007491_2009495_-	DNA ligase	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
VDZ17911.1|2009498_2011691_-	ATP-dependent DNA helicase UvrD/PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
VDZ17912.1|2011687_2012380_-	geranylgeranylglyceryl diphosphate synthase	NA	NA	NA	NA	NA
VDZ17913.1|2012551_2012854_-	His repressor	NA	NA	NA	NA	NA
VDZ17914.1|2012962_2014258_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
VDZ17915.1|2015117_2016284_+	Staphopain A precursor	NA	NA	NA	NA	NA
VDZ17916.1|2016314_2016641_+|protease	putative cysteine protease inhibitor (Staphostatin A)	protease	NA	NA	NA	NA
VDZ17917.1|2017227_2017545_+|transposase	truncated transposase for IS1272	transposase	A0A146ICT8	Staphylococcus_phage	100.0	3.5e-50
VDZ17918.1|2017701_2018046_+|transposase	transposase	transposase	Q9MBP7	Staphylococcus_prophage	95.6	1.1e-54
>prophage 16
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	2036151	2099995	2844405	terminase,holin,capsid,transposase,head,tail	Staphylococcus_phage(95.83%)	85	NA	NA
VDZ17936.1|2036151_2038215_-|transposase	transposase B regulatory protein	transposase	NA	NA	NA	NA
VDZ17937.1|2038217_2039369_-	Transposase	NA	P97010	Streptococcus_pyogenes_phage	31.0	9.0e-11
VDZ17938.1|2039875_2040049_-	exported protein	NA	NA	NA	NA	NA
VDZ17939.1|2040427_2041540_+	choloylglycine hydrolase	NA	NA	NA	NA	NA
VDZ17940.1|2041596_2042439_-	exported protein	NA	NA	NA	NA	NA
VDZ17941.1|2042435_2042993_-	Predicted membrane protein	NA	NA	NA	NA	NA
VDZ17942.1|2043052_2043577_-	membrane protein	NA	NA	NA	NA	NA
VDZ17943.1|2043697_2044261_+	Thioredoxin	NA	NA	NA	NA	NA
VDZ17944.1|2044326_2045067_-	ABC-2 transporter family protein	NA	NA	NA	NA	NA
VDZ17945.1|2045066_2045939_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
VDZ17946.1|2045935_2046616_-	membrane protein	NA	NA	NA	NA	NA
VDZ17947.1|2046616_2047513_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	6.5e-17
VDZ17948.1|2047509_2047890_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
VDZ17949.1|2048166_2048325_-	membrane protein	NA	NA	NA	NA	NA
VDZ17950.1|2048865_2050152_+	Aspartate aminotransferase	NA	NA	NA	NA	NA
VDZ17951.1|2050430_2052479_-	MHC class II analog (pseudogene)	NA	NA	NA	NA	NA
VDZ17952.1|2052864_2053065_+	beta-hemolysin	NA	A0A1P8L6A7	Staphylococcus_phage	98.5	1.0e-26
VDZ17953.1|2054239_2054590_-	Involved in expression of fibrinogen binding protein, phage associated	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
VDZ17954.1|2055274_2055724_+	Chemotaxis-inhibiting protein CHIPS, phage associated	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
VDZ17955.1|2055818_2056115_-	amidase	NA	A0A1P8L6B4	Staphylococcus_phage	100.0	1.3e-51
VDZ17956.1|2056803_2057295_-	Staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	99.4	1.2e-86
VDZ17957.1|2057485_2058241_-	Autolysin	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
VDZ17958.1|2058252_2058507_-|holin	Phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
VDZ17959.1|2059044_2059275_-	phage protein	NA	D2JLG2	Staphylococcus_phage	100.0	1.2e-31
VDZ17960.1|2059398_2059686_-	phage protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
VDZ17961.1|2059732_2059885_-	phage protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
VDZ17962.1|2059874_2063660_-	phage minor structural protein	NA	A0A1X9H0H3	Staphylococcus_phage	98.4	0.0e+00
VDZ17963.1|2063675_2065160_-	bacteriophage protein	NA	A0A068A242	Staphylococcus_phage	99.8	2.0e-297
VDZ17964.1|2065156_2069686_-|tail	TP901 family phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	96.8	0.0e+00
VDZ17965.1|2069742_2069880_-	phage protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
VDZ17966.1|2069930_2070281_-	phage protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
VDZ17967.1|2070597_2071239_-|tail	phage major tail protein	tail	A0A1W6JPP5	Staphylococcus_phage	100.0	1.1e-119
VDZ17968.1|2071239_2071647_-	putative bacteriophage protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
VDZ17969.1|2071643_2072048_-	phage protein	NA	A0A1W6JPJ1	Staphylococcus_phage	100.0	2.5e-69
VDZ17970.1|2072044_2072407_-|head,tail	phage head-tail adaptor	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
VDZ17971.1|2072390_2072675_-	Gp6 protein	NA	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
VDZ17972.1|2072664_2072949_-|terminase	phage terminase small subunit	terminase	A0A1W6JPL8	Staphylococcus_phage	100.0	2.3e-45
VDZ17973.1|2072968_2074189_-|capsid	Phage major capsid protein	capsid	A0A075LYD8	Staphylococcus_phage	100.0	7.8e-231
VDZ17974.1|2074136_2074874_-	ATP-dependent endopeptidase clp proteolytic subunit	NA	A0A1W6JPK0	Staphylococcus_phage	100.0	1.8e-129
VDZ17975.1|2074857_2076021_-	Portal protein, phage associated	NA	A0A1W6JPQ9	Staphylococcus_phage	100.0	1.8e-216
VDZ17976.1|2076036_2077698_-|terminase	Phage terminase large subunit	terminase	Q8LTH3	Staphylococcus_phage	99.8	0.0e+00
VDZ17977.1|2077694_2078039_-	phage protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
VDZ17978.1|2078169_2078469_-	phage-associated homing endonuclease	NA	A0A1W6JPL7	Staphylococcus_phage	100.0	2.7e-52
VDZ17979.1|2078700_2079117_-	phage transcriptional regulator	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
VDZ17980.1|2079144_2079345_-	phage protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
VDZ17981.1|2079344_2079494_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
VDZ17982.1|2079490_2079880_-	phage membrane protein	NA	A0A1W6JPK8	Staphylococcus_phage	100.0	8.9e-64
VDZ17983.1|2079869_2080106_-	phage protein	NA	A0A2I6PDD1	Staphylococcus_phage	98.7	4.8e-36
VDZ17984.1|2080098_2080386_-	phage protein	NA	Q4ZAB6	Staphylococcus_virus	98.9	2.4e-45
VDZ17985.1|2080422_2080956_-	dUTP pyrophosphatase	NA	A0A059T5A7	Staphylococcus_phage	97.2	2.1e-92
VDZ17986.1|2080948_2081119_-	phage protein	NA	A7TWH6	Staphylococcus_phage	94.6	2.2e-22
VDZ17987.1|2081105_2081360_-	Phage protein	NA	A0A2I6PDI5	Staphylococcus_phage	96.4	2.1e-37
VDZ17988.1|2081352_2081637_-	phage protein	NA	E9LT36	Staphylococcus_phage	100.0	2.7e-46
VDZ17989.1|2081633_2082083_-	YopX-family protein	NA	A0A2I6PDH2	Staphylococcus_phage	100.0	9.3e-81
VDZ17990.1|2082079_2082274_-	phage protein	NA	A0A2I6PE33	Staphylococcus_phage	100.0	2.5e-27
VDZ17991.1|2082270_2082657_-	phage protein	NA	I1W655	Staphylococcus_phage	100.0	4.1e-69
VDZ17992.1|2082670_2082913_-	phage family protein	NA	R9QT89	Staphylococcus_phage	100.0	3.0e-41
VDZ17993.1|2082916_2083285_-	Phage protein	NA	A0A0E3XD52	Staphylococcus_phage	100.0	6.7e-53
VDZ17994.1|2083297_2083702_-	phage protein	NA	A0A0E3XBN4	Staphylococcus_phage	99.3	4.2e-72
VDZ17995.1|2083710_2083929_-	phage protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
VDZ17996.1|2083935_2084820_-	Phage protein	NA	S4V6D4	Staphylococcus_phage	95.6	3.1e-136
VDZ17997.1|2084849_2085320_-	Single-stranded DNA-binding protein, phage associated	NA	A0A1P8L6D9	Staphylococcus_phage	99.4	9.7e-81
VDZ17998.1|2085320_2085806_-	Metallo-beta-lactamase superfamily domain protein in prophage	NA	A0A2I6PDI9	Staphylococcus_phage	99.4	2.7e-86
VDZ17999.1|2086018_2086939_-	recombinase, phage RecT family protein	NA	A0A1V0E5D7	Staphylococcus_phage	100.0	1.0e-166
VDZ18000.1|2086940_2088884_-	Uncharacterized conserved protein	NA	I1W619	Staphylococcus_phage	100.0	0.0e+00
VDZ18001.1|2088892_2089156_-	phage protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
VDZ18002.1|2089164_2089425_-	putative phi PVL-like protein	NA	A0A2I6PDH1	Staphylococcus_phage	100.0	2.6e-43
VDZ18003.1|2089517_2089679_-	phage protein	NA	Q4ZAZ7	Staphylococcus_virus	100.0	2.5e-20
VDZ18004.1|2089675_2089996_-	Uncharacterized protein conserved in bacteria	NA	A0A1W6JPI1	Staphylococcus_phage	100.0	7.4e-56
VDZ18005.1|2090228_2090489_-	putative phi PVL-like protein	NA	A0A2I6PDT7	Staphylococcus_phage	100.0	3.5e-40
VDZ18006.1|2090501_2091251_-	putative phage anti-repressor protein	NA	A0A1W6JPN2	Staphylococcus_phage	100.0	2.0e-136
VDZ18007.1|2091510_2091651_-	phage protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
VDZ18008.1|2091665_2092112_-	phage protein	NA	A0A1W6JPI3	Staphylococcus_phage	100.0	1.9e-78
VDZ18009.1|2092124_2092367_-	phage DNA-binding protein	NA	A0A1X9H035	Staphylococcus_phage	100.0	1.6e-39
VDZ18010.1|2092530_2093247_+	putative phage repressor protein	NA	A0A1X9H038	Staphylococcus_phage	100.0	5.4e-131
VDZ18011.1|2093258_2094113_+	HIRAN domain-containing protein	NA	A0A1X9H037	Staphylococcus_phage	100.0	7.3e-151
VDZ18012.1|2094186_2094333_+	phage protein	NA	A0A1X9H032	Staphylococcus_phage	100.0	3.3e-19
VDZ18013.1|2094329_2094515_+	phage protein	NA	U5U7D6	Staphylococcus_phage	100.0	2.3e-25
VDZ18014.1|2094585_2094768_+	Putative cytosolic protein	NA	A0A2I6PDR4	Staphylococcus_phage	98.3	3.4e-26
VDZ18015.1|2094845_2095559_+	phi77 ORF017-like protein	NA	A0A1X9H026	Staphylococcus_phage	100.0	5.0e-129
VDZ18016.1|2095749_2096145_+	DNA integration/recombination/inversion protein	NA	E9LT82	Staphylococcus_phage	99.2	6.3e-65
VDZ18017.1|2096318_2096786_+	DNA integration/recombination/inversion protein	NA	A0A1P8L6H8	Staphylococcus_phage	100.0	5.1e-82
VDZ18018.1|2096842_2097667_+	phospholipase C	NA	A0A1P8L6H7	Staphylococcus_phage	100.0	6.8e-162
VDZ18019.1|2097904_2098921_-	gamma-hemolysin component B	NA	A0A2I6PER8	Staphylococcus_phage	29.3	3.9e-26
VDZ18020.1|2098942_2099995_-	Leukocidin S subunit	NA	A0A2I6PDF3	Staphylococcus_phage	32.1	1.3e-35
>prophage 17
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	2107456	2131855	2844405	terminase,protease,transposase	Staphylococcus_phage(27.27%)	23	NA	NA
VDZ18027.1|2107456_2108047_-|terminase	putative phage terminase	terminase	Q4ZE85	Staphylococcus_phage	94.7	1.2e-96
VDZ18028.1|2108043_2108256_-|transposase	transposase	transposase	Q4ZE86	Staphylococcus_phage	74.3	1.1e-23
VDZ18029.1|2108957_2110574_-	heat shock protein 60 family chaperone GroEL	NA	A0A240F779	uncultured_virus	54.7	5.8e-157
VDZ18030.1|2110649_2110934_-	Heat shock protein 60 family co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
VDZ18031.1|2111110_2111854_+|protease	CAAX amino terminal protease family protein	protease	NA	NA	NA	NA
VDZ18032.1|2111877_2113137_-	membrane anchored protein	NA	NA	NA	NA	NA
VDZ18033.1|2113333_2113960_+	nitroreductase family protein	NA	NA	NA	NA	NA
VDZ18034.1|2114229_2114967_+	Aliphatic amidase amiE	NA	NA	NA	NA	NA
VDZ18035.1|2115019_2115787_-|transposase	transposase	transposase	A0A059NT77	Lactococcus_phage	44.6	6.3e-53
VDZ18036.1|2115798_2117034_-|transposase	transposase	transposase	A0A059NT83	Lactococcus_phage	49.1	3.3e-104
VDZ18037.1|2118131_2118755_+	accessory gene regulator protein B AGRB	NA	NA	NA	NA	NA
VDZ18038.1|2118751_2118892_+	Regulator protein agrD	NA	NA	NA	NA	NA
VDZ18039.1|2118916_2120209_+	Regulator protein agrC	NA	NA	NA	NA	NA
VDZ18040.1|2120227_2120944_+	accessory gene regulator protein A	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.6	2.3e-25
VDZ18041.1|2121311_2122271_-	Fructokinase	NA	NA	NA	NA	NA
VDZ18042.1|2122267_2123752_-	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	25.8	8.0e-20
VDZ18043.1|2123900_2124851_-	Sucrose operon repressor ScrR, LacI family	NA	NA	NA	NA	NA
VDZ18044.1|2125033_2126284_-	ammonium transporter family protein	NA	H8ZJB2	Ostreococcus_tauri_virus	31.0	1.0e-39
VDZ18045.1|2126491_2126716_-	transcriptional regulator	NA	NA	NA	NA	NA
VDZ18046.1|2126780_2127854_-	putative transport system permease protein	NA	NA	NA	NA	NA
VDZ18047.1|2128157_2128793_-	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	NA	NA	NA	NA	NA
VDZ18048.1|2129045_2130974_+	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	30.7	1.2e-52
VDZ18049.1|2131558_2131855_+|transposase	transposase for IS1272	transposase	A0A146ICT8	Staphylococcus_phage	97.9	7.5e-47
>prophage 18
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	2520889	2575535	2844405	holin,transposase	Bacillus_phage(30.0%)	46	NA	NA
VDZ18418.1|2520889_2521246_-|transposase	transposase for IS1272	transposase	A0A146ICT8	Staphylococcus_phage	99.2	7.7e-62
VDZ18419.1|2521653_2523387_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.9	2.4e-31
VDZ18420.1|2523411_2525175_-	ABC transporter ATPase/permease	NA	W8CYL7	Bacillus_phage	24.7	4.2e-36
VDZ18421.1|2526175_2526562_-	Putative sugar translocase in surface polysaccharides biosynthesis	NA	NA	NA	NA	NA
VDZ18422.1|2526829_2527972_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	44.3	5.3e-56
VDZ18423.1|2528031_2528691_+	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ18424.1|2528869_2530081_+	Bicyclomycin resistance protein TcaB	NA	NA	NA	NA	NA
VDZ18425.1|2530203_2530677_-	Putative transcriptional activator	NA	NA	NA	NA	NA
VDZ18426.1|2530789_2531446_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VDZ18427.1|2531508_2532315_-	putative phosphoesterase, putative	NA	NA	NA	NA	NA
VDZ18428.1|2532600_2534010_+	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA	NA
VDZ18429.1|2534147_2536226_+	Na+/H+ antiporter	NA	NA	NA	NA	NA
VDZ18430.1|2536365_2538195_-	Amino acid permease	NA	NA	NA	NA	NA
VDZ18431.1|2538426_2539923_+	flp protein	NA	NA	NA	NA	NA
VDZ18432.1|2540013_2540865_-	putative NAD-dependent epimerase/dehydratase	NA	NA	NA	NA	NA
VDZ18433.1|2541188_2542124_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
VDZ18434.1|2542349_2543750_-	integral membrane efflux protein	NA	NA	NA	NA	NA
VDZ18435.1|2544043_2544739_-|holin	putative glycine betaine/carnitine/choline transport system permease protein	holin	NA	NA	NA	NA
VDZ18436.1|2544738_2545680_-|holin	Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	holin	NA	NA	NA	NA
VDZ18437.1|2545696_2546332_-|holin	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	holin	NA	NA	NA	NA
VDZ18438.1|2546328_2547555_-|holin	glycine betaine/carnitine/choline ABC transporter, ATP-binding protein, putative	holin	Q6GZ03	Mycoplasma_phage	50.5	6.6e-20
VDZ18439.1|2548224_2548824_-	molecular chaperone GroEL	NA	NA	NA	NA	NA
VDZ18440.1|2549004_2550642_+	Amino acid permease	NA	NA	NA	NA	NA
VDZ18441.1|2550948_2552301_+	Carboxylesterase type B	NA	A0A0B5J865	Pandoravirus	34.2	8.6e-13
VDZ18442.1|2552362_2553550_-	chloramphenicol resistance protein	NA	NA	NA	NA	NA
VDZ18443.1|2553943_2554720_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
VDZ18444.1|2554712_2555375_-	ABC superfamily ATP binding cassette transporter, ABC protein	NA	W8CYL7	Bacillus_phage	33.9	4.8e-17
VDZ18445.1|2555720_2556797_-	endoglucanase M	NA	NA	NA	NA	NA
VDZ18446.1|2557151_2557418_-	addiction module toxin	NA	NA	NA	NA	NA
VDZ18447.1|2557417_2557675_-	prevent-host-death family protein	NA	NA	NA	NA	NA
VDZ18448.1|2558033_2558489_+	lipoprotein	NA	NA	NA	NA	NA
VDZ18449.1|2558656_2560234_-	Ferredoxin-dependent glutamate synthase	NA	NA	NA	NA	NA
VDZ18450.1|2560428_2561178_+	membrane protein	NA	NA	NA	NA	NA
VDZ18451.1|2561643_2562837_-	Antibiotic resistance protein	NA	NA	NA	NA	NA
VDZ18452.1|2562848_2563598_-	nickel transport ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.1e-20
VDZ18453.1|2563590_2564406_-	Oligopeptide transporter putative ATPase domain protein	NA	G9BWD6	Planktothrix_phage	30.3	3.6e-14
VDZ18454.1|2564402_2565272_-	Oligopeptide transporter putative membrane permease domain protein	NA	NA	NA	NA	NA
VDZ18455.1|2565268_2566204_-	Oligopeptide transporter putative membrane permease domain protein	NA	NA	NA	NA	NA
VDZ18456.1|2566216_2567815_-	Oligopeptide transporter putative substrate binding domain protein	NA	NA	NA	NA	NA
VDZ18457.1|2567957_2569259_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VDZ18458.1|2569251_2570070_-	nicotianamine synthase	NA	NA	NA	NA	NA
VDZ18459.1|2570080_2570902_-	Putative Similar to diaminopimelate epimerase	NA	NA	NA	NA	NA
VDZ18460.1|2571780_2572146_-	Uncharacterised protein	NA	NA	NA	NA	NA
VDZ18461.1|2572409_2573228_-	Glutamate dehydrogenase	NA	L7RG25	Acanthamoeba_polyphaga_moumouvirus	26.5	2.3e-08
VDZ18462.1|2573462_2575001_+	aminobenzoyl-glutamate transport protein	NA	NA	NA	NA	NA
VDZ18463.1|2575112_2575535_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 19
LR134086	Staphylococcus aureus strain NCTC13142 genome assembly, chromosome: 1	2844405	2640278	2648406	2844405	transposase	Staphylococcus_phage(28.57%)	9	NA	NA
VDZ18528.1|2640278_2641247_-	Esterase/lipase	NA	A0A167RJ59	Powai_lake_megavirus	26.1	6.8e-12
VDZ18529.1|2641367_2641724_-	thioredoxin	NA	NA	NA	NA	NA
VDZ18530.1|2641765_2642176_-	thioesterase superfamily protein	NA	NA	NA	NA	NA
VDZ18531.1|2642711_2642975_+|transposase	transposase for IS1272	transposase	A0A146ICT8	Staphylococcus_phage	97.7	2.2e-42
VDZ18532.1|2643023_2643251_+|transposase	transposase for IS1272	transposase	A0ZS58	Staphylococcus_virus	97.3	3.9e-35
VDZ18533.1|2643528_2643735_+|transposase	transposase for IS1272	transposase	A0A146ICT8	Staphylococcus_phage	93.9	4.6e-19
VDZ18534.1|2643839_2644184_+|transposase	transposase	transposase	Q9MBP7	Staphylococcus_prophage	92.1	2.0e-51
VDZ18535.1|2644299_2646399_-	Pts system, glucose-specific iiabc component	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.4e-07
VDZ18536.1|2646666_2648406_-	Pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.1	1.0e-34
