bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	4.1|842593|29|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	29	0	0	1	29	2803642	2803670	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	6e-08	47.5	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	2803642-2803670	TGCATTGTTTGTAGAATTTCTTTTCGAAA	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	4.1|842593|29|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	96.55	29	1	0	1	29	403419	403391	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	5e-07	44.4	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	403391-403419	TTTCGAAAAGAAATTCTACAAGCAATGCA	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	4.1|842593|29|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	96.55	29	1	0	1	29	1847024	1846996	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	5e-07	44.4	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	1846996-1847024	TTTCGAAAAGAAATTCTACAGACAATGCA	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	4.1|842593|29|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.10	29	2	0	1	29	904765	904793	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	904765-904793	TGCATTGCCTGTAGAATTTCTTTTCGAAA	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	4.1|842593|29|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.10	29	2	0	1	29	973267	973295	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	973267-973295	TGCATTGCCTGTAGAATTTCTTTTCGAAA	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	4.1|842593|29|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.10	29	2	0	1	29	1661750	1661778	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	1661750-1661778	TGCATTGCCTGTAGAATTTCTTTTCGAAA	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	4.1|842593|29|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.10	29	2	0	1	29	2014425	2014453	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	2014425-2014453	TGCATTGTCTGTAGAATTTCCTTTCGAAA	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	4.1|842593|29|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.10	29	2	0	1	29	2554220	2554192	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	4e-06	41.2	1.0	TGCATTGTTTGTAGAATTTCTTTTCGAAA	2554192-2554220	TTTCGAAAAGAAATTCTACAGGCAATGCA	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	5.1|847995|26|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	96.15	26	1	0	1	26	811012	810987	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	810987-811012	CGGGGCCCCAACACAGAAGCAGGCGG	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	5.1|847995|26|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	96.15	26	1	0	1	26	1171773	1171748	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	1171748-1171773	CGGGGCCCCAACATAGAAGCTGGCGG	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	5.1|847995|26|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	96.15	26	1	0	1	26	2803554	2803579	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	2803554-2803579	CCGCCAGCTTCTATGTTGGGGCCCCG	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	5.1|847995|26|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	96.15	26	1	0	1	26	2803610	2803635	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	2803610-2803635	CCGCCAGCTTCTTTGTTGGGGCCCCG	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	5.1|847995|26|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	92.31	26	2	0	1	26	811068	811043	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	811043-811068	CGGGGCCCCAACATAGAAGCAGGCGG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	5.1|847995|26|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	92.31	26	2	0	1	26	953541	953516	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	953516-953541	CGGGGCCCCAACACAGAGGCTGGTGG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	6.1|904723|34|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	34	0	0	1	34	1379915	1379882	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1379882-1379915	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	6.1|904723|34|LR134085|CRISPRCasFinder	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	34	0	0	1	34	1469067	1469100	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1469067-1469100	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	7.1|953572|26|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	26	0	0	1	26	953516	953541	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-06	42.8	1.0	CGGGGCCCCAACACAGAGGCTGGTGG	953516-953541	CGGGGCCCCAACACAGAGGCTGGTGG	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	7.1|953572|26|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	92.31	26	2	0	1	26	905083	905058	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGTGG	905058-905083	CCATCAGCTTCTGTGTTGGGGCCCCG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	7.2|953628|26|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	96.15	26	1	0	1	26	953516	953541	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-05	39.6	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	953516-953541	CGGGGCCCCAACACAGAGGCTGGTGG	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	7.2|953628|26|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	92.31	26	2	0	1	26	810987	811012	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	810987-811012	CGGGGCCCCAACACAGAAGCAGGCGG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	7.2|953628|26|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	92.31	26	2	0	1	26	1171748	1171773	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	1171748-1171773	CGGGGCCCCAACATAGAAGCTGGCGG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	7.2|953628|26|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	92.31	26	2	0	1	26	2803579	2803554	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2803554-2803579	CCGCCAGCTTCTATGTTGGGGCCCCG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	7.2|953628|26|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	92.31	26	2	0	1	26	2803635	2803610	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2803610-2803635	CCGCCAGCTTCTTTGTTGGGGCCCCG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	7.4|953742|26|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	96.15	26	1	0	1	26	848076	848051	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-05	39.6	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	848051-848076	TCGTCAGCTTCTGTGTTGGGGCCCCG	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	7.4|953742|26|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	96.15	26	1	0	1	26	2003726	2003701	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-05	39.6	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	2003701-2003726	TCGTCAGCTTCTGTGTTGGGGCCCCG	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	7.4|953742|26|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	92.31	26	2	0	1	26	403257	403282	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-04	36.5	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	403257-403282	CGGGGCCCCAACAAAGAAGCTGACGA	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.1|1171597|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	97.30	37	1	0	1	37	1846993	1847029	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-10	57.1	1.0	GAATTTCAAAAAGAAATTCTACAGACAATGCAAGTTG	1846993-1847029	GAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTG	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.1|1171597|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	94.59	37	2	0	1	37	904796	904760	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-09	53.9	1.0	GAATTTCAAAAAGAAATTCTACAGACAATGCAAGTTG	904760-904796	CAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTC	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.1|1171597|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	94.59	37	2	0	1	37	1661781	1661745	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-09	53.9	1.0	GAATTTCAAAAAGAAATTCTACAGACAATGCAAGTTG	1661745-1661781	CAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTC	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.1|1171597|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	94.59	37	2	0	1	37	2014456	2014420	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-09	53.9	1.0	GAATTTCAAAAAGAAATTCTACAGACAATGCAAGTTG	2014420-2014456	CAACTTGCATTGTCTGTAGAATTTCCTTTCGAAATTC	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.1|1171597|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	94.59	37	2	0	1	37	2554189	2554225	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-09	53.9	1.0	GAATTTCAAAAAGAAATTCTACAGACAATGCAAGTTG	2554189-2554225	GAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.1|1171597|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	94.59	37	2	0	1	37	2803673	2803637	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-09	53.9	1.0	GAATTTCAAAAAGAAATTCTACAGACAATGCAAGTTG	2803637-2803673	CAACTTGCATTGTTTGTAGAATTTCTTTTCGAAATTC	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.2|1171653|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	403274	403310	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	403274-403310	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.2|1171653|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	848059	848023	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	848023-848059	AACTTGCACATTATTGTAAGCTGACTTTTCGTCAGCT	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.2|1171653|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	1071019	1070983	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	1070983-1071019	AACTTGCACATTATTGTAAGCTGACTTTTCGTCAGCT	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.2|1171653|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	1379841	1379877	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	1379841-1379877	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.2|1171653|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	2003709	2003673	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	2003673-2003709	AACTTGCACATTATTGTAAGCTGACTTTTCGTCAGCT	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.2|1171653|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	97.30	37	1	0	1	37	1469141	1469105	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-10	57.1	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	1469105-1469141	AACTTGCACATTATTGTAAGCTGACTTTTCGTCATCT	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.2|1171653|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	97.30	37	1	0	1	37	1661839	1661803	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-10	57.1	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	1661803-1661839	AACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCT	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.2|1171653|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	97.30	37	1	0	1	37	2638253	2638217	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-10	57.1	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	2638217-2638253	AACTCGCACATTATTGTAAGCTGACTTTTCGTCAGCT	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.2|1171653|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	94.59	37	2	0	1	37	1171765	1171801	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-09	53.9	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	1171765-1171801	AGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGTT	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.2|1171653|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	94.59	37	2	0	1	37	2003650	2003614	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-09	53.9	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	2003614-2003650	AACCTGCACATTATCGTAAGCTGACTTTTCGTCAGCT	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.2|1171653|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	94.59	37	2	0	1	37	2803618	2803582	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-09	53.9	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTT	2803582-2803618	AACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCT	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.3|1171709|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	137124	137160	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	137124-137160	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.3|1171709|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	684270	684306	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	684270-684306	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.3|1171709|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	800568	800532	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	800532-800568	AACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTC	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.3|1171709|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	801502	801538	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	801502-801538	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.3|1171709|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	848115	848079	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	848079-848115	AACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTC	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.3|1171709|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	1379899	1379935	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	1379899-1379935	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.3|1171709|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	1469083	1469047	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	1469047-1469083	AACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTC	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.3|1171709|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	100.00	37	0	0	1	37	2005166	2005130	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-11	60.2	1.0	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	2005130-2005166	AACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTC	0
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.3|1171709|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	97.30	37	1	0	1	37	1097215	1097179	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-10	57.1	1.0	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	1097179-1097215	AACTTACATTGTCTGTAGAAATTGGGAATCCAATTTC	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	9.3|1171709|37|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	97.30	37	1	0	1	37	2528941	2528905	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	2e-10	57.1	1.0	GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT	2528905-2528941	AACTTGCATTGTCTCTAGAAATTGGGAATCCAATTTC	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	11.1|2362789|33|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.94	33	2	0	1	33	848031	848063	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	848031-848063	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	11.1|2362789|33|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.94	33	2	0	1	33	1379869	1379837	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1379837-1379869	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	11.1|2362789|33|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.94	33	2	0	1	33	1469113	1469145	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1469113-1469145	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	11.1|2362789|33|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.94	33	2	0	1	33	2003681	2003713	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	2003681-2003713	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	11.1|2362789|33|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.94	33	2	0	1	33	2638225	2638257	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	2638225-2638257	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	11.2|2362845|36|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	97.22	36	1	0	1	36	1847024	1846989	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	5e-10	55.5	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1846989-1847024	TAGAGAATTTCGAAAAGAAATTCTACAGACAATGCA	1
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	11.2|2362845|36|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	94.44	36	2	0	1	36	1661750	1661785	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1661750-1661785	TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTA	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	11.2|2362845|36|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	94.44	36	2	0	1	36	2014425	2014460	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	2014425-2014460	TGCATTGTCTGTAGAATTTCCTTTCGAAATTCTCTA	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	11.3|2362904|33|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.94	33	2	0	1	33	848031	848063	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	848031-848063	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	11.3|2362904|33|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.94	33	2	0	1	33	1379869	1379837	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1379837-1379869	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	11.3|2362904|33|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.94	33	2	0	1	33	2003681	2003713	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	2003681-2003713	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
LR134085	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	11.3|2362904|33|LR134085|CRT	LR134085.1	Staphylococcus aureus strain NCTC12233 genome assembly, chromosome: 1	93.94	33	2	0	1	33	2638225	2638257	441870-441970|685232-685324|801514-801596|842567-842647|847965-848050|904699-904780|953542-953880|1087271-1087358|1171578-1171764|2238602-2238752|2362766-2362959|2478545-2478632	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	2638225-2638257	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
