assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900635635.1_31436_D01	LR134152	Escherichia coli strain NCTC9104 genome assembly, chromosome: 1	1	998084-998417	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,29,28	0	0	NA	NA	I-E:I-E:I-E	5,5,5	5	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	NA|47aa|up_1|LR134152.1_996793_996934_-,NA	NA|434aa|up_9|LR134152.1_987490_988792_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|LR134152.1_988839_991074_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|LR134152.1_991151_991400_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|LR134152.1_991399_991735_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|LR134152.1_991805_992597_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|LR134152.1_992824_994462_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|LR134152.1_994549_995848_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|LR134152.1_995907_996780_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|LR134152.1_996793_996934_-	NA	NA|224aa|up_0|LR134152.1_997072_997744_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|LR134152.1_999055_1000534_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|LR134152.1_1000560_1001838_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|LR134152.1_1002223_1003009_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|LR134152.1_1003078_1004533_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|LR134152.1_1004554_1005964_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|LR134152.1_1005941_1006721_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|LR134152.1_1006717_1007578_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|LR134152.1_1007725_1008301_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|LR134152.1_1008317_1008578_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|LR134152.1_1008568_1009840_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCA_900635635.1_31436_D01	LR134152	Escherichia coli strain NCTC9104 genome assembly, chromosome: 1	2	1016717-1017050	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	4,5,5	5	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	NA|47aa|up_1|LR134152.1_1015363_1015504_-,NA	NA|287aa|up_9|LR134152.1_1006717_1007578_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|up_8|LR134152.1_1007725_1008301_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|up_7|LR134152.1_1008317_1008578_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|up_6|LR134152.1_1008568_1009840_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|122aa|up_5|LR134152.1_1009917_1010283_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_4|LR134152.1_1010598_1012398_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_3|LR134152.1_1012397_1014110_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_2|LR134152.1_1014183_1014918_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|47aa|up_1|LR134152.1_1015363_1015504_-	NA	NA|371aa|up_0|LR134152.1_1015526_1016639_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|346aa|down_0|LR134152.1_1017131_1018169_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|LR134152.1_1018420_1019329_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|LR134152.1_1019330_1020758_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|LR134152.1_1020757_1021363_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|LR134152.1_1021412_1021736_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|LR134152.1_1021929_1022241_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|LR134152.1_1022259_1022970_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|LR134152.1_1022969_1023449_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|LR134152.1_1023445_1024495_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|45aa|down_9|LR134152.1_1024475_1024610_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCA_900635635.1_31436_D01	LR134152	Escherichia coli strain NCTC9104 genome assembly, chromosome: 1	3	1537797-1537914	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	NA,NA	NA|300aa|up_9|LR134152.1_1527280_1528180_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_8|LR134152.1_1528372_1529563_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_7|LR134152.1_1529559_1530819_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_6|LR134152.1_1530808_1532437_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_5|LR134152.1_1532709_1534068_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_4|LR134152.1_1534072_1535149_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|69aa|up_3|LR134152.1_1535190_1535397_-	PRK09729, PRK09729, hypothetical protein; Provisional	NA|217aa|up_2|LR134152.1_1535611_1536262_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|LR134152.1_1536315_1536570_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|LR134152.1_1536569_1537700_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|LR134152.1_1537933_1540219_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1235aa|down_1|LR134152.1_1540963_1544668_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|LR134152.1_1544795_1545518_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|LR134152.1_1545664_1548292_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|406aa|down_4|LR134152.1_1548440_1549658_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|160aa|down_5|LR134152.1_1549648_1550128_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_6|LR134152.1_1550124_1550748_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1463aa|down_7|LR134152.1_1550891_1555280_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_8|LR134152.1_1555280_1556930_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_9|LR134152.1_1556934_1557711_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]
GCA_900635635.1_31436_D01	LR134152	Escherichia coli strain NCTC9104 genome assembly, chromosome: 1	5	2174561-2174684	5	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	NA,NA	NA|79aa|up_9|LR134152.1_2163468_2163705_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|up_8|LR134152.1_2164015_2165428_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_7|LR134152.1_2165984_2166194_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_6|LR134152.1_2166648_2167275_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_5|LR134152.1_2167295_2169398_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_4|LR134152.1_2169410_2170049_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_3|LR134152.1_2170112_2170781_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_2|LR134152.1_2170777_2171563_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|255aa|up_1|LR134152.1_2171614_2172379_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_0|LR134152.1_2172390_2173995_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|419aa|down_0|LR134152.1_2174998_2176255_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|LR134152.1_2176295_2177669_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|LR134152.1_2177883_2178525_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|LR134152.1_2178564_2179713_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|LR134152.1_2180003_2181215_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|LR134152.1_2181327_2182260_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|LR134152.1_2182256_2183282_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|390aa|down_7|LR134152.1_2183835_2185005_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|LR134152.1_2185239_2185821_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|272aa|down_9|LR134152.1_2185948_2186764_-	pfam00877, NLPC_P60, NlpC/P60 family
GCA_900635635.1_31436_D01	LR134152	Escherichia coli strain NCTC9104 genome assembly, chromosome: 1	7	3135666-3135810	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	NA|205aa|up_5|LR134152.1_3130922_3131537_+,NA|40aa|up_4|LR134152.1_3131830_3131950_+,NA|56aa|up_2|LR134152.1_3132708_3132876_+,NA	NA|140aa|up_9|LR134152.1_3128995_3129415_+	TIGR01913, Uncharacterized_protein_UU154, phage recombination protein Bet	NA|227aa|up_8|LR134152.1_3129411_3130092_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain	NA|61aa|up_7|LR134152.1_3130088_3130271_+	pfam07026, DUF1317, Protein of unknown function (DUF1317)	NA|64aa|up_6|LR134152.1_3130243_3130435_+	pfam07131, DUF1382, Protein of unknown function (DUF1382)	NA|205aa|up_5|LR134152.1_3130922_3131537_+	NA	NA|40aa|up_4|LR134152.1_3131830_3131950_+	NA	NA|143aa|up_3|LR134152.1_3132197_3132626_+	pfam10711, DUF2513, Hypothetical protein (DUF2513)	NA|56aa|up_2|LR134152.1_3132708_3132876_+	NA	NA|357aa|up_1|LR134152.1_3133111_3134182_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|LR134152.1_3134316_3135600_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|LR134152.1_3135833_3138095_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|LR134152.1_3138277_3139711_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|LR134152.1_3139786_3140839_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|LR134152.1_3141022_3141976_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|LR134152.1_3142016_3143012_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|LR134152.1_3143166_3143985_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|LR134152.1_3143985_3145044_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|LR134152.1_3145046_3145736_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|LR134152.1_3145735_3146509_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|LR134152.1_3146675_3146825_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCA_900635635.1_31436_D01	LR134152	Escherichia coli strain NCTC9104 genome assembly, chromosome: 1	8	3367583-3367679	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	NA,NA	NA|181aa|up_9|LR134152.1_3360282_3360825_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|321aa|up_8|LR134152.1_3361208_3362171_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_7|LR134152.1_3362172_3362385_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_6|LR134152.1_3362492_3363014_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_5|LR134152.1_3363049_3364435_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_4|LR134152.1_3364608_3365103_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_3|LR134152.1_3365105_3365828_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_2|LR134152.1_3365945_3366455_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|235aa|up_1|LR134152.1_3366451_3367156_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|130aa|up_0|LR134152.1_3367128_3367518_+	COG0026, PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]	NA|261aa|down_0|LR134152.1_3367822_3368605_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|LR134152.1_3368601_3369417_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|LR134152.1_3369427_3370687_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|LR134152.1_3370696_3372364_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|LR134152.1_3372680_3373730_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|LR134152.1_3373751_3374987_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|LR134152.1_3374997_3375783_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|LR134152.1_3376010_3377156_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|LR134152.1_3377177_3378479_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|LR134152.1_3378535_3379897_-	PRK08044, PRK08044, allantoinase AllB
GCA_900635635.1_31436_D01	LR134152	Escherichia coli strain NCTC9104 genome assembly, chromosome: 1	9	3507823-3507967	9	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	NA,NA	NA|606aa|up_9|LR134152.1_3494708_3496526_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_8|LR134152.1_3496681_3498055_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_7|LR134152.1_3498130_3499450_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_6|LR134152.1_3499856_3501152_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_5|LR134152.1_3501209_3501899_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|247aa|up_4|LR134152.1_3502088_3502829_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|168aa|up_3|LR134152.1_3502788_3503292_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_2|LR134152.1_3503288_3506435_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|300aa|up_1|LR134152.1_3506476_3507376_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|143aa|up_0|LR134152.1_3507317_3507746_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|LR134152.1_3507990_3508899_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|326aa|down_1|LR134152.1_3508957_3509935_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|95aa|down_2|LR134152.1_3510581_3510866_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_3|LR134152.1_3510937_3511615_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_4|LR134152.1_3511872_3512064_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_5|LR134152.1_3512113_3512638_-	PRK03731, aroL, shikimate kinase AroL	NA|153aa|down_6|LR134152.1_3512820_3513279_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|270aa|down_7|LR134152.1_3513398_3514208_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|372aa|down_8|LR134152.1_3514224_3515340_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional	NA|107aa|down_9|LR134152.1_3515441_3515762_-	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF
GCA_900635635.1_31436_D01	LR134152	Escherichia coli strain NCTC9104 genome assembly, chromosome: 1	10	3900349-3900478	10	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCAT	40	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,WYL	NA,NA|73aa|down_1|LR134152.1_3900949_3901168_+	NA|96aa|up_9|LR134152.1_3889341_3889629_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|LR134152.1_3889625_3890912_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|LR134152.1_3890962_3891904_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_6|LR134152.1_3891918_3892689_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|LR134152.1_3893161_3894676_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|LR134152.1_3894706_3895849_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|LR134152.1_3895977_3897195_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|LR134152.1_3897268_3898822_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|LR134152.1_3898930_3899716_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|134aa|up_0|LR134152.1_3899909_3900311_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|LR134152.1_3900519_3900915_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|73aa|down_1|LR134152.1_3900949_3901168_+	NA	NA|1074aa|down_2|LR134152.1_3901175_3904397_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_3|LR134152.1_3904414_3905563_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_4|LR134152.1_3906018_3906840_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|273aa|down_5|LR134152.1_3907006_3907825_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|32aa|down_6|LR134152.1_3907824_3907920_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_7|LR134152.1_3907985_3908936_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_8|LR134152.1_3908937_3909387_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_9|LR134152.1_3909511_3910006_-	PRK00376, lspA, lipoprotein signal peptidase
