assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900636275.1_40295_G01	LR134246	Escherichia coli strain NCTC9702 genome assembly, chromosome: 1	1	1208400-1208795	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,WYL,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,cas14j,DinG	Type I-E	GTGTTCCCCGCGTCAGCGGGGATAAACCG,GTGTTCCCCGCGTCAGCGGGGATAAACCG,GTGTTCCCCGCGTCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	TypeI-E	cas3,csa3,PD-DExK,WYL,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,cas14j,DinG	NA,NA	NA|571aa|up_9|LR134246.1_1196606_1198319_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|LR134246.1_1198394_1199129_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|886aa|up_7|LR134246.1_1199783_1202441_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|LR134246.1_1202538_1204101_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|LR134246.1_1204097_1204634_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|LR134246.1_1204648_1205704_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|LR134246.1_1205714_1206461_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|LR134246.1_1206442_1207093_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|LR134246.1_1207089_1208013_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|LR134246.1_1208009_1208303_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|LR134246.1_1208876_1209914_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|LR134246.1_1210165_1211074_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|254aa|down_2|LR134246.1_1211075_1211837_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|237aa|down_3|LR134246.1_1211793_1212504_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_4|LR134246.1_1212503_1213109_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_5|LR134246.1_1213158_1213482_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_6|LR134246.1_1213675_1213987_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_7|LR134246.1_1214005_1214716_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_8|LR134246.1_1214715_1215195_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_9|LR134246.1_1215191_1216241_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed
GCA_900636275.1_40295_G01	LR134246	Escherichia coli strain NCTC9702 genome assembly, chromosome: 1	2	2476524-2476647	2	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,WYL,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,cas14j,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,cas14j,DinG	NA,NA	NA|79aa|up_9|LR134246.1_2465430_2465667_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|444aa|up_8|LR134246.1_2465977_2467309_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_7|LR134246.1_2467948_2468158_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_6|LR134246.1_2468614_2469241_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_5|LR134246.1_2469261_2471364_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_4|LR134246.1_2471376_2472015_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|262aa|up_3|LR134246.1_2472741_2473527_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|255aa|up_2|LR134246.1_2473578_2474343_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|227aa|up_1|LR134246.1_2474354_2475035_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|287aa|up_0|LR134246.1_2475096_2475957_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|419aa|down_0|LR134246.1_2476961_2478218_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|LR134246.1_2478258_2479632_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|LR134246.1_2479846_2480488_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|LR134246.1_2480527_2481676_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|LR134246.1_2481966_2483178_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|LR134246.1_2483290_2484223_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|LR134246.1_2484219_2485245_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|390aa|down_7|LR134246.1_2485798_2486968_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|LR134246.1_2487112_2487694_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|276aa|down_9|LR134246.1_2487821_2488649_-	pfam00877, NLPC_P60, NlpC/P60 family
GCA_900636275.1_40295_G01	LR134246	Escherichia coli strain NCTC9702 genome assembly, chromosome: 1	4	3995712-3995846	4	CRISPRCasFinder	no		cas3,csa3,PD-DExK,WYL,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,cas14j,DinG	Orphan	GCCATTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA	42	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,cas14j,DinG	NA|180aa|up_9|LR134246.1_3985071_3985611_+,NA|272aa|up_4|LR134246.1_3990137_3990953_-,NA|216aa|up_2|LR134246.1_3992516_3993164_-,NA	NA|180aa|up_9|LR134246.1_3985071_3985611_+	NA	NA|297aa|up_8|LR134246.1_3985556_3986447_-	PRK11320, prpB, 2-methylisocitrate lyase; Provisional	NA|529aa|up_7|LR134246.1_3986685_3988272_+	PRK15424, PRK15424, propionate catabolism operon regulatory protein PrpR; Provisional	NA|92aa|up_6|LR134246.1_3988369_3988645_-	PRK09929, PRK09929, hypothetical protein; Provisional	NA|211aa|up_5|LR134246.1_3988830_3989463_+	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein	NA|272aa|up_4|LR134246.1_3990137_3990953_-	NA	NA|350aa|up_3|LR134246.1_3991195_3992245_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|216aa|up_2|LR134246.1_3992516_3993164_-	NA	NA|460aa|up_1|LR134246.1_3993283_3994663_-	PRK06846, PRK06846, putative deaminase; Validated	NA|317aa|up_0|LR134246.1_3994672_3995623_-	PRK12352, PRK12352, putative carbamate kinase; Reviewed	NA|473aa|down_0|LR134246.1_3995868_3997287_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|516aa|down_1|LR134246.1_3997286_3998834_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|288aa|down_2|LR134246.1_3998823_3999687_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|202aa|down_3|LR134246.1_3999726_4000332_-	sd00045, ANK, ankyrin repeats	NA|166aa|down_4|LR134246.1_4000589_4001087_+	pfam06496, DUF1097, Protein of unknown function (DUF1097)	NA|311aa|down_5|LR134246.1_4001178_4002111_+	PRK10094, PRK10094, HTH-type transcriptional activator AllS	NA|293aa|down_6|LR134246.1_4002152_4003031_-	smart00052, EAL, Putative diguanylate phosphodiesterase	NA|1350aa|down_7|LR134246.1_4003383_4007433_-	PRK14849, PRK14849, autotransporter barrel domain-containing lipoprotein	NA|198aa|down_8|LR134246.1_4007940_4008534_-	PRK09928, PRK09928, choline transport protein BetT; Provisional	NA|498aa|down_9|LR134246.1_4008481_4009975_-	PRK09928, PRK09928, choline transport protein BetT; Provisional
