assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900636305.1_40415_B02	LR134248	Escherichia coli strain NCTC10537 genome assembly, chromosome: 1	2	1069735-1070007	3,2,2	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	4,4,4	4	Orphan	cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	NA|47aa|up_1|LR134248.1_1068381_1068522_-,NA	NA|287aa|up_9|LR134248.1_1059734_1060595_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|up_8|LR134248.1_1060742_1061318_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|up_7|LR134248.1_1061334_1061595_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|up_6|LR134248.1_1061585_1062857_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|122aa|up_5|LR134248.1_1062934_1063300_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_4|LR134248.1_1063615_1065415_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_3|LR134248.1_1065414_1067127_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_2|LR134248.1_1067200_1067935_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|47aa|up_1|LR134248.1_1068381_1068522_-	NA	NA|371aa|up_0|LR134248.1_1068544_1069657_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|346aa|down_0|LR134248.1_1070088_1071126_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|LR134248.1_1071377_1072286_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|LR134248.1_1072287_1073715_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|LR134248.1_1073714_1074320_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|LR134248.1_1074369_1074693_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|LR134248.1_1074886_1075198_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|LR134248.1_1075216_1075927_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|LR134248.1_1075926_1076406_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|LR134248.1_1076402_1077452_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|LR134248.1_1077432_1078194_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCA_900636305.1_40415_B02	LR134248	Escherichia coli strain NCTC10537 genome assembly, chromosome: 1	3	1548589-1548704	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	Orphan	GAGCCGTAGGCCGGATAAGGCGTTCACGC	29	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	NA,NA	NA|301aa|up_9|LR134248.1_1538059_1538962_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_8|LR134248.1_1539154_1540345_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_7|LR134248.1_1540341_1541601_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_6|LR134248.1_1541590_1543219_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_5|LR134248.1_1543491_1544850_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_4|LR134248.1_1544854_1545931_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|69aa|up_3|LR134248.1_1545972_1546179_-	PRK09729, PRK09729, hypothetical protein; Provisional	NA|217aa|up_2|LR134248.1_1546393_1547044_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|LR134248.1_1547097_1547352_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|LR134248.1_1547351_1548482_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|LR134248.1_1548723_1551009_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1235aa|down_1|LR134248.1_1551752_1555457_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|LR134248.1_1555584_1556307_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|LR134248.1_1556453_1559081_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|LR134248.1_1559229_1560918_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|LR134248.1_1560914_1561538_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|LR134248.1_1561681_1566076_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|LR134248.1_1566076_1567726_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|LR134248.1_1567730_1568507_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|LR134248.1_1568580_1569765_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCA_900636305.1_40415_B02	LR134248	Escherichia coli strain NCTC10537 genome assembly, chromosome: 1	4	2095830-2095953	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	NA,NA	NA|79aa|up_9|LR134248.1_2084737_2084974_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|up_8|LR134248.1_2085284_2086697_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_7|LR134248.1_2087253_2087463_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_6|LR134248.1_2087917_2088544_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_5|LR134248.1_2088564_2090667_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_4|LR134248.1_2090679_2091318_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_3|LR134248.1_2091381_2092050_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_2|LR134248.1_2092046_2092832_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|255aa|up_1|LR134248.1_2092883_2093648_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_0|LR134248.1_2093659_2095264_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|419aa|down_0|LR134248.1_2096267_2097524_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|LR134248.1_2097564_2098938_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|LR134248.1_2099152_2099794_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|LR134248.1_2099833_2100982_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|LR134248.1_2101272_2102484_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|LR134248.1_2102596_2103529_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|LR134248.1_2103525_2104551_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|390aa|down_7|LR134248.1_2105104_2106274_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|LR134248.1_2106508_2107090_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|272aa|down_9|LR134248.1_2107217_2108033_-	pfam00877, NLPC_P60, NlpC/P60 family
GCA_900636305.1_40415_B02	LR134248	Escherichia coli strain NCTC10537 genome assembly, chromosome: 1	6	3075866-3076010	6	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	Orphan	CCTGATAAGACACGTTAAACGTCACATCAGGCATCGCTTGTCGGATGCGGCGCT	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	NA,NA|36aa|down_6|LR134248.1_3084098_3084206_+	NA|135aa|up_9|LR134248.1_3063632_3064037_-	PRK10800, PRK10800, acyl-CoA thioesterase YbgC; Provisional	NA|98aa|up_8|LR134248.1_3064186_3064480_-	PRK10588, PRK10588, hypothetical protein; Provisional	NA|38aa|up_7|LR134248.1_3064479_3064593_-	COG4890, COG4890, Predicted outer membrane lipoprotein [Function unknown]	NA|380aa|up_6|LR134248.1_3064607_3065747_-	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II	NA|523aa|up_5|LR134248.1_3065762_3067331_-	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA	NA|878aa|up_4|LR134248.1_3068177_3070811_-	PRK09819, PRK09819, mannosylglycerate hydrolase	NA|639aa|up_3|LR134248.1_3070828_3072745_-	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional	NA|241aa|up_2|LR134248.1_3072913_3073636_+	PRK09764, PRK09764, GntR family transcriptional regulator	NA|290aa|up_1|LR134248.1_3073739_3074609_-	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|389aa|up_0|LR134248.1_3074608_3075775_-	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|406aa|down_0|LR134248.1_3076140_3077358_-	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|934aa|down_1|LR134248.1_3077372_3080174_-	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|239aa|down_2|LR134248.1_3080474_3081191_-	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|589aa|down_3|LR134248.1_3081206_3082973_-	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|116aa|down_4|LR134248.1_3082972_3083320_-	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit	NA|135aa|down_5|LR134248.1_3083313_3083718_-	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit	NA|36aa|down_6|LR134248.1_3084098_3084206_+	NA	NA|428aa|down_7|LR134248.1_3084411_3085695_+	PRK05614, gltA, citrate synthase	NA|189aa|down_8|LR134248.1_3086084_3086651_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|817aa|down_9|LR134248.1_3086710_3089161_+	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]
GCA_900636305.1_40415_B02	LR134248	Escherichia coli strain NCTC10537 genome assembly, chromosome: 1	7	3438680-3438824	7	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	NA,NA	NA|357aa|up_9|LR134248.1_3423818_3424889_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|LR134248.1_3424981_3425563_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|606aa|up_7|LR134248.1_3425567_3427385_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|LR134248.1_3427540_3428914_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|LR134248.1_3428989_3430309_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|LR134248.1_3430715_3432011_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|LR134248.1_3432068_3432758_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|LR134248.1_3432947_3434150_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_1|LR134248.1_3434146_3437293_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|423aa|up_0|LR134248.1_3437334_3438603_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|LR134248.1_3438847_3439756_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|326aa|down_1|LR134248.1_3439814_3440792_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|92aa|down_2|LR134248.1_3440861_3441137_+	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|126aa|down_3|LR134248.1_3441181_3441559_+	pfam03400, DDE_Tnp_IS1, IS1 transposase	NA|40aa|down_4|LR134248.1_3441929_3442049_+	PRK05324, PRK05324, succinylglutamate desuccinylase; Provisional	NA|95aa|down_5|LR134248.1_3442215_3442500_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_6|LR134248.1_3442571_3443249_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_7|LR134248.1_3443506_3443698_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_8|LR134248.1_3443747_3444272_-	PRK03731, aroL, shikimate kinase AroL	NA|153aa|down_9|LR134248.1_3444454_3444913_-	PRK00124, PRK00124, YaiI/YqxD family protein
GCA_900636305.1_40415_B02	LR134248	Escherichia coli strain NCTC10537 genome assembly, chromosome: 1	8	3565519-3565615	8	CRISPRCasFinder	no	DEDDh	cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	Unclear	GCCAGCGTCGCATCAGGCATCCGCGCA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	NA,NA	NA|153aa|up_9|LR134248.1_3557397_3557856_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|486aa|up_8|LR134248.1_3558116_3559574_+	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|167aa|up_7|LR134248.1_3559630_3560131_-	PRK08179, prfH, peptide chain release factor-like protein; Reviewed	NA|89aa|up_6|LR134248.1_3560099_3560366_-	PRK09588, PRK09588, hypothetical protein; Reviewed	NA|125aa|up_5|LR134248.1_3560599_3560974_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|133aa|up_4|LR134248.1_3561061_3561460_-	PRK09885, PRK09885, type II toxin-antitoxin system YafO family toxin	NA|98aa|up_3|LR134248.1_3561462_3561756_-	PRK09778, PRK09778, type I toxin-antitoxin system antitoxin YafN	NA|352aa|up_2|LR134248.1_3561807_3562863_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|212aa|up_1|LR134248.1_3562933_3563569_-	PRK06778, PRK06778, hypothetical protein; Validated	NA|580aa|up_0|LR134248.1_3563663_3565403_+	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|166aa|down_0|LR134248.1_3565618_3566116_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|258aa|down_1|LR134248.1_3566291_3567065_-	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|87aa|down_2|LR134248.1_3567250_3567511_+	COG3077, RelB, DNA-damage-inducible protein J [DNA replication, recombination, and repair]	NA|93aa|down_3|LR134248.1_3567513_3567792_+	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown]	NA|247aa|down_4|LR134248.1_3567947_3568688_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_5|LR134248.1_3568658_3569426_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|193aa|down_6|LR134248.1_3569631_3570210_-	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|815aa|down_7|LR134248.1_3570449_3572894_+	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed	NA|149aa|down_8|LR134248.1_3572936_3573383_-	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional	NA|257aa|down_9|LR134248.1_3573563_3574334_+	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional
GCA_900636305.1_40415_B02	LR134248	Escherichia coli strain NCTC10537 genome assembly, chromosome: 1	9	3771819-3771951	4	PILER-CR	no		cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	Orphan	ATCACCAATATTGAAAA	17	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	NA,NA	NA|126aa|up_9|LR134248.1_3762524_3762902_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|281aa|up_8|LR134248.1_3762908_3763751_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|197aa|up_7|LR134248.1_3763828_3764419_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|LR134248.1_3764499_3766362_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|LR134248.1_3766354_3766885_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|LR134248.1_3766992_3768324_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|LR134248.1_3768380_3768668_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|LR134248.1_3768664_3769951_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|LR134248.1_3770001_3770943_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|LR134248.1_3770957_3771728_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|LR134248.1_3772201_3773716_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|LR134248.1_3773746_3774889_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|140aa|down_2|LR134248.1_3775017_3775437_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|246aa|down_3|LR134248.1_3775496_3776234_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_4|LR134248.1_3776307_3777861_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_5|LR134248.1_3777969_3778755_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_6|LR134248.1_3778760_3779351_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_7|LR134248.1_3779559_3779955_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_8|LR134248.1_3780216_3783438_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_9|LR134248.1_3783455_3784604_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit
GCA_900636305.1_40415_B02	LR134248	Escherichia coli strain NCTC10537 genome assembly, chromosome: 1	10	3779389-3779530	9	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	NA,NA	NA|429aa|up_9|LR134248.1_3768664_3769951_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_8|LR134248.1_3770001_3770943_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_7|LR134248.1_3770957_3771728_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_6|LR134248.1_3772201_3773716_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_5|LR134248.1_3773746_3774889_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|140aa|up_4|LR134248.1_3775017_3775437_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|246aa|up_3|LR134248.1_3775496_3776234_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|LR134248.1_3776307_3777861_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|LR134248.1_3777969_3778755_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|LR134248.1_3778760_3779351_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|LR134248.1_3779559_3779955_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_1|LR134248.1_3780216_3783438_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_2|LR134248.1_3783455_3784604_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_3|LR134248.1_3785059_3785881_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_4|LR134248.1_3786047_3786962_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_5|LR134248.1_3787027_3787978_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|LR134248.1_3787979_3788429_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|LR134248.1_3788553_3789048_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|LR134248.1_3789047_3791864_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|LR134248.1_3791906_3792848_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
GCA_900636305.1_40415_B02	LR134248	Escherichia coli strain NCTC10537 genome assembly, chromosome: 1	11	3980511-3980660	10	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,c2c9_V-U4,RT	NA,NA|551aa|down_6|LR134248.1_3987774_3989427_-	NA|340aa|up_9|LR134248.1_3968703_3969723_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|188aa|up_8|LR134248.1_3969726_3970290_-	PRK09825, idnK, gluconokinase	NA|344aa|up_7|LR134248.1_3970506_3971538_+	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional	NA|255aa|up_6|LR134248.1_3971561_3972326_+	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional	NA|440aa|up_5|LR134248.1_3972388_3973708_+	TIGR00791, Gluconate_permease, gluconate transporter	NA|333aa|up_4|LR134248.1_3973774_3974773_+	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators	NA|501aa|up_3|LR134248.1_3974850_3976353_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|LR134248.1_3976513_3977596_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|LR134248.1_3977595_3978696_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|LR134248.1_3978962_3980474_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|LR134248.1_3980827_3981271_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|LR134248.1_3981270_3984126_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|LR134248.1_3984181_3985378_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|LR134248.1_3985570_3986074_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|LR134248.1_3986119_3986536_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|LR134248.1_3986697_3987702_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|551aa|down_6|LR134248.1_3987774_3989427_-	NA	NA|151aa|down_7|LR134248.1_3989549_3990002_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_8|LR134248.1_3990146_3990740_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_9|LR134248.1_3990810_3991524_+	PRK12742, PRK12742, SDR family oxidoreductase
