assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900636315.1_40363_G01	LR134254	Klebsiella aerogenes strain NCTC9644 genome assembly, chromosome: 1	1	2277256-2277772	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	cas3,csa3,RT,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	Type I-E	GTCTTCCCCACACGCGTGGGGGTGTTTC,GTCTTCCCCACACGCGTGGGGGTGTTTC,GTCTTCCCCACACGCGTGGGGGTGTTTC	28,28,28	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	5,8,8	8	TypeI-E	cas3,csa3,RT,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	NA,NA|195aa|down_8|LR134254.1_2287557_2288142_+	NA|131aa|up_9|LR134254.1_2263755_2264148_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|411aa|up_8|LR134254.1_2264184_2265417_-	PRK15403, PRK15403, multidrug efflux MFS transporter MdtM	NA|145aa|up_7|LR134254.1_2265982_2266417_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|400aa|up_6|LR134254.1_2266533_2267733_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|386aa|up_5|LR134254.1_2268028_2269186_+	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|717aa|up_4|LR134254.1_2269228_2271379_-	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type	NA|360aa|up_3|LR134254.1_2271626_2272706_-	PRK10098, PRK10098, putative dehydrogenase; Provisional	NA|363aa|up_2|LR134254.1_2273008_2274097_+	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|590aa|up_1|LR134254.1_2274170_2275940_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|357aa|up_0|LR134254.1_2275932_2277003_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	cas3|872aa|down_0|LR134254.1_2278184_2280800_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|508aa|down_1|LR134254.1_2280803_2282327_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|189aa|down_2|LR134254.1_2282338_2282905_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|216aa|down_3|LR134254.1_2282897_2283545_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|345aa|down_4|LR134254.1_2283574_2284609_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|239aa|down_5|LR134254.1_2284621_2285338_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|down_6|LR134254.1_2285337_2286213_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|down_7|LR134254.1_2286190_2286478_+	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	NA|195aa|down_8|LR134254.1_2287557_2288142_+	NA	NA|372aa|down_9|LR134254.1_2288621_2289737_+	PHA02053, PHA02053, hypothetical protein
GCA_900636315.1_40363_G01	LR134254	Klebsiella aerogenes strain NCTC9644 genome assembly, chromosome: 1	2	2286526-2288383	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	cas3,csa3,RT,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	Type I-E	GTCTTCCCCACGCACGTGGGGGTGTTTC,GTCTTCCCCACGCACGTGGGGGTGTTTC,GTCTTCCCCACGCACGTGGGGGTGTTTC	28,28,28	2	4	2286859-2286891|2286859-2286891|2287042-2287074|2287042-2287074	LR134254.1_2068192-2068224|LR134258.1_17297-17265|LR134254.1_1491947-1491979|LR134254.1_3441413-3441445	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	30,30,12	30	TypeI-E	cas3,csa3,RT,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	NA,NA	NA|590aa|up_9|LR134254.1_2274170_2275940_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|357aa|up_8|LR134254.1_2275932_2277003_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	cas3|872aa|up_7|LR134254.1_2278184_2280800_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|508aa|up_6|LR134254.1_2280803_2282327_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|189aa|up_5|LR134254.1_2282338_2282905_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|216aa|up_4|LR134254.1_2282897_2283545_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|345aa|up_3|LR134254.1_2283574_2284609_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|239aa|up_2|LR134254.1_2284621_2285338_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|up_1|LR134254.1_2285337_2286213_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|up_0|LR134254.1_2286190_2286478_+	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	NA|372aa|down_0|LR134254.1_2288621_2289737_+	PHA02053, PHA02053, hypothetical protein	NA|228aa|down_1|LR134254.1_2289747_2290431_+	pfam16277, DUF4926, Domain of unknown function (DUF4926)	NA|124aa|down_2|LR134254.1_2290491_2290863_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|252aa|down_3|LR134254.1_2291364_2292120_+	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3	NA|595aa|down_4|LR134254.1_2292122_2293907_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|446aa|down_5|LR134254.1_2293920_2295258_+	pfam00034, Cytochrom_C, Cytochrome c	NA|208aa|down_6|LR134254.1_2295341_2295965_+	PRK13538, PRK13538, cytochrome c biogenesis heme-transporting ATPase CcmA	NA|220aa|down_7|LR134254.1_2295961_2296621_+	TIGR01190, Heme_exporter_protein_B, heme exporter protein CcmB	NA|246aa|down_8|LR134254.1_2296670_2297408_+	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|77aa|down_9|LR134254.1_2297404_2297635_+	COG3114, CcmD, Heme exporter protein D [Intracellular trafficking and secretion]
GCA_900636315.1_40363_G01	LR134254	Klebsiella aerogenes strain NCTC9644 genome assembly, chromosome: 1	3	4359360-4359499	3	CRISPRCasFinder	no	DEDDh	cas3,csa3,RT,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	Unclear	TGCCGGGTGGCGGCTGGCGCCTTACCCGGCCTACAAAACTGAAGCAGCAG	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	NA,NA	NA|428aa|up_9|LR134254.1_4349108_4350392_+	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase	NA|467aa|up_8|LR134254.1_4350527_4351928_+	PRK10197, PRK10197, GABA permease	NA|231aa|up_7|LR134254.1_4351973_4352666_+	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional	NA|133aa|up_6|LR134254.1_4352751_4353150_-	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|415aa|up_5|LR134254.1_4353207_4354452_-	PRK05077, frsA, esterase FrsA	NA|153aa|up_4|LR134254.1_4354557_4355016_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|486aa|up_3|LR134254.1_4355273_4356731_+	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|151aa|up_2|LR134254.1_4356773_4357226_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|352aa|up_1|LR134254.1_4357228_4358284_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|287aa|up_0|LR134254.1_4358443_4359304_+	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins	NA|72aa|down_0|LR134254.1_4359526_4359742_-	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown]	NA|408aa|down_1|LR134254.1_4359744_4360968_-	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional	NA|199aa|down_2|LR134254.1_4360980_4361577_-	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional	NA|213aa|down_3|LR134254.1_4361583_4362222_-	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|265aa|down_4|LR134254.1_4362214_4363009_-	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional	NA|413aa|down_5|LR134254.1_4363001_4364240_-	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional	NA|448aa|down_6|LR134254.1_4364243_4365587_-	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional	NA|247aa|down_7|LR134254.1_4365998_4366739_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_8|LR134254.1_4366709_4367477_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|194aa|down_9|LR134254.1_4367551_4368133_-	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase
