The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134291	Streptococcus gordonii strain NCTC7868 genome assembly, chromosome: 1	2196660	200944	269476	2196660	transposase,protease	Streptococcus_phage(42.86%)	58	NA	NA
VEE20277.1|200944_201862_-|protease	protease	protease	NA	NA	NA	NA
VEE20278.1|202207_203086_+	ribosome-associated GTPase	NA	NA	NA	NA	NA
VEE20279.1|203102_203762_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
VEE20280.1|203700_204387_+	thiamine pyrophosphokinase	NA	NA	NA	NA	NA
VEE20281.1|204388_205645_+	competence-induced protein Ccs50	NA	NA	NA	NA	NA
VEE20282.1|205634_206576_+	cmp-binding-factor 1	NA	NA	NA	NA	NA
VEE20283.1|206641_207487_+	pur operon repressor	NA	NA	NA	NA	NA
VEE20284.1|207501_208041_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE20285.1|208285_208699_+	30S ribosomal protein S12	NA	NA	NA	NA	NA
VEE20286.1|208718_209189_+	30S ribosomal protein S7	NA	NA	NA	NA	NA
VEE20287.1|209603_211685_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.7	1.4e-62
VEE20288.1|211917_212928_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
VEE20289.1|213173_217922_+	glycosyl hydrolase family LPXTG cell wall surface protein	NA	NA	NA	NA	NA
VEE20290.1|218240_219440_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
VEE20291.1|219622_224350_+	streptococcal surface protein A	NA	NA	NA	NA	NA
VEE20292.1|224768_229268_+	streptococcal surface protein B	NA	NA	NA	NA	NA
VEE20293.1|229513_230164_+	putative peptidoglycan hydrolase and general stress protein	NA	NA	NA	NA	NA
VEE20294.1|230315_230846_+	membrane protein	NA	NA	NA	NA	NA
VEE20295.1|231134_231500_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
VEE20296.1|231529_232876_+	glutamate-ammonia ligase	NA	NA	NA	NA	NA
VEE20297.1|232929_233334_+	histone acetyltransferase HPA2	NA	NA	NA	NA	NA
VEE20298.1|233568_234903_+	proton-dependent manganese transporter group C beta 2	NA	NA	NA	NA	NA
VEE20299.1|235111_235678_+|transposase	transposase, IS5 family	transposase	A0A1X9I5T2	Streptococcus_phage	75.5	9.9e-80
VEE20300.1|235858_236563_+|transposase	ISSag8, transposase	transposase	A0A1X9I5T2	Streptococcus_phage	78.1	3.1e-83
VEE20301.1|236590_238273_-	metallo-beta-lactamase superfamily protein 1	NA	NA	NA	NA	NA
VEE20302.1|238276_238507_-	Protein of uncharacterised function DUF1447	NA	NA	NA	NA	NA
VEE20303.1|238783_239476_+	glycoprotein endopeptidase	NA	NA	NA	NA	NA
VEE20304.1|239472_239925_+	ribosomal-protein-alanine N-acetyltransferase	NA	NA	NA	NA	NA
VEE20305.1|239914_240925_+|protease	glycoprotease family protein	protease	NA	NA	NA	NA
VEE20306.1|240934_241630_+	transport protein-like protein	NA	NA	NA	NA	NA
VEE20307.1|241619_241952_+	integral membrane protein	NA	NA	NA	NA	NA
VEE20308.1|242060_242807_+	methyltransferase	NA	NA	NA	NA	NA
VEE20309.1|243134_243377_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE20310.1|243465_243774_+	putative lipoprotein	NA	NA	NA	NA	NA
VEE20311.1|243874_244615_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
VEE20312.1|244670_245846_-	flavoprotein	NA	A0A2H4PQX1	Staphylococcus_phage	61.3	1.5e-16
VEE20313.1|246112_246607_+	DNA-binding protein	NA	NA	NA	NA	NA
VEE20314.1|246662_248423_+	glycerophosphoryl diester phosphodiesterase family protein	NA	A0A220BY94	Staphylococcus_phage	24.3	8.3e-08
VEE20315.1|248464_248764_-	hypothetical cytosolic protein	NA	NA	NA	NA	NA
VEE20316.1|248955_249363_+	putative lipoprotein	NA	NA	NA	NA	NA
VEE20317.1|249395_251675_-	x-prolyl-dipeptidyl aminopeptidase	NA	NA	NA	NA	NA
VEE20318.1|251778_252630_+	glycerol uptake facilitator protein-like protein	NA	M1HQB9	Paramecium_bursaria_Chlorella_virus	25.2	5.2e-16
VEE20319.1|252770_254051_+	membrane protein	NA	NA	NA	NA	NA
VEE20320.1|254178_254916_+	proteinase	NA	NA	NA	NA	NA
VEE20321.1|254912_255848_+	beta-lactamase-like protein	NA	NA	NA	NA	NA
VEE20322.1|255978_256857_+	mevalonate kinase	NA	NA	NA	NA	NA
VEE20323.1|256838_257786_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
VEE20324.1|257775_258795_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
VEE20325.1|258778_259783_+	isopentenyl pyrophosphate isomerase	NA	NA	NA	NA	NA
VEE20326.1|259819_261094_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA	NA
VEE20327.1|261090_262269_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
VEE20328.1|262456_262912_-	membrane protein	NA	NA	NA	NA	NA
VEE20329.1|262916_263675_-	membrane spanning protein	NA	NA	NA	NA	NA
VEE20330.1|263812_266128_-	pyruvate formate-lyase	NA	A0A2P0VNR5	Tetraselmis_virus	33.3	5.4e-116
VEE20331.1|266377_267442_+	DNA polymerase IV	NA	NA	NA	NA	NA
VEE20332.1|267653_267980_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE20333.1|268298_268775_+|protease	CAAX amino protease	protease	NA	NA	NA	NA
VEE20334.1|268726_269476_+|protease	CAAX amino protease	protease	NA	NA	NA	NA
>prophage 2
LR134291	Streptococcus gordonii strain NCTC7868 genome assembly, chromosome: 1	2196660	338185	400968	2196660	integrase,protease,tRNA,transposase,coat	Streptococcus_phage(30.77%)	57	391167:391202	406807:406842
VEE20396.1|338185_342670_+|protease	serine protease subtilase family LPXTG cell wall surface protein	protease	A0A217EQY2	Bacillus_phage	26.8	2.2e-12
VEE20397.1|342754_347239_+|protease	serine protease subtilase family LPXTG cell wall surface protein	protease	NA	NA	NA	NA
VEE20398.1|347330_347747_-	membrane protein	NA	NA	NA	NA	NA
VEE20399.1|347727_348627_-	exopolysaccharide biosynthesis protein	NA	Q4ZC55	Staphylococcus_virus	35.9	1.2e-13
VEE20400.1|348623_349667_-	dolichol-phosphate mannosyltransferase	NA	NA	NA	NA	NA
VEE20401.1|349896_350511_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	41.7	3.5e-14
VEE20402.1|350666_351809_+	arabinose efflux permease	NA	NA	NA	NA	NA
VEE20403.1|351810_352539_+	pseudouridine synthase rRNA-specific	NA	NA	NA	NA	NA
VEE20404.1|353012_354794_+	membrane protein	NA	NA	NA	NA	NA
VEE20405.1|354795_355695_+	membrane protein	NA	NA	NA	NA	NA
VEE20406.1|355704_357534_+	signal peptide	NA	NA	NA	NA	NA
VEE20407.1|357554_358955_+	lipopolysaccharide N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
VEE20408.1|358954_360400_+	transmembrane protein	NA	NA	NA	NA	NA
VEE20409.1|360392_362168_+|coat	Spore coat assembly protein	coat	NA	NA	NA	NA
VEE20410.1|362154_362889_+	VTC domain-containing protein	NA	NA	NA	NA	NA
VEE20411.1|362907_363579_+	membrane protein	NA	NA	NA	NA	NA
VEE20412.1|363595_364981_+	signal peptide	NA	NA	NA	NA	NA
VEE20413.1|365208_365478_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
VEE20414.1|366091_367018_-	cinnamoyl ester hydrolase	NA	NA	NA	NA	NA
VEE20415.1|367306_367720_+	Protein of uncharacterised function (DUF2992)	NA	NA	NA	NA	NA
VEE20416.1|367909_368131_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
VEE20417.1|368146_368461_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	37.4	1.2e-15
VEE20418.1|368560_369229_-	aquaporin Z, water channel protein	NA	NA	NA	NA	NA
VEE20419.1|369339_370131_-	aquaporin Z	NA	NA	NA	NA	NA
VEE20420.1|370142_370475_-	transcriptional regulator	NA	NA	NA	NA	NA
VEE20421.1|370625_371015_+	ketosteroid isomerase-like protein	NA	NA	NA	NA	NA
VEE20422.1|371306_371951_-	putative lipoprotein	NA	NA	NA	NA	NA
VEE20423.1|372116_373913_-	oligoendopeptidase	NA	A0A1X9I5X5	Streptococcus_phage	36.9	6.7e-106
VEE20424.1|374027_375389_-	major facilitator transporter	NA	A0A0M3UL24	Mycobacterium_phage	21.4	3.2e-07
VEE20425.1|376030_378217_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
VEE20426.1|378303_378921_+	serine O-acetyltransferase	NA	NA	NA	NA	NA
VEE20427.1|378969_379170_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE20428.1|379183_379948_+	uridine phosphorylase	NA	NA	NA	NA	NA
VEE20429.1|379956_380478_+	reductase	NA	NA	NA	NA	NA
VEE20430.1|380495_381839_+|tRNA	cysteinyl-tRNA synthetase	tRNA	M1PG92	Moumouvirus	32.4	7.2e-44
VEE20431.1|381831_382236_+|tRNA	cysteinyl-tRNA synthetase	tRNA	NA	NA	NA	NA
VEE20432.1|382222_383098_+	leucine-rich protein	NA	NA	NA	NA	NA
VEE20433.1|383206_384337_+	ABC transporter, ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.2	3.8e-22
VEE20434.1|384719_386567_+	transporter	NA	NA	NA	NA	NA
VEE20435.1|386634_387597_-	membrane spanning protein	NA	NA	NA	NA	NA
VEE20436.1|387744_388476_+	RNA methyltransferase	NA	NA	NA	NA	NA
VEE20437.1|388475_389120_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE20438.1|389261_390125_+	DegV family fatty acid binding protein	NA	NA	NA	NA	NA
VEE20439.1|390320_390767_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
VEE20440.1|390786_391179_+	SSU ribosomal protein S9p (S16e)	NA	NA	NA	NA	NA
391167:391202	attL	CTCAAAACGTTAATCAATACGATTATATCAACGTTT	NA	NA	NA	NA
VEE20441.1|391310_392465_-|integrase	phage integrase family site specific recombinase	integrase	A0A1S5S7K9	Streptococcus_phage	33.8	7.5e-50
VEE20442.1|392516_393035_-	immunity repressor protein	NA	NA	NA	NA	NA
VEE20443.1|393182_393464_+	DNA-binding protein	NA	NA	NA	NA	NA
VEE20444.1|393472_394312_+	gp49 bacteriophage-like protein	NA	Q7Y4K5	Streptococcus_phage	58.3	5.5e-50
VEE20445.1|394364_394664_+	Tn5252, Orf 9 protein	NA	NA	NA	NA	NA
VEE20446.1|394670_395003_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE20447.1|394983_395178_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE20448.1|396469_397084_+	cadmium resistance protein	NA	NA	NA	NA	NA
VEE20449.1|397095_397434_+	cadmium efflux system accessory protein	NA	E4ZFI8	Streptococcus_phage	34.3	4.5e-11
VEE20450.1|397703_398096_+	mercuric resistance operon regulatory protein MerR	NA	NA	NA	NA	NA
VEE20451.1|398124_400020_+	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	31.4	8.3e-54
VEE20452.1|400179_400968_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	58.5	9.3e-84
406807:406842	attR	CTCAAAACGTTAATCAATACGATTATATCAACGTTT	NA	NA	NA	NA
>prophage 3
LR134291	Streptococcus gordonii strain NCTC7868 genome assembly, chromosome: 1	2196660	689531	696953	2196660		Streptococcus_phage(50.0%)	9	NA	NA
VEE20706.1|689531_690752_+	cytosine-specific methyltransferase	NA	V5URQ5	Oenococcus_phage	58.4	5.4e-131
VEE20707.1|690822_692406_+	Uncharacterised protein	NA	V5US45	Oenococcus_phage	31.0	6.3e-23
VEE20708.1|692478_692772_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE20709.1|692749_693124_-	Uncharacterised protein	NA	A0A1B0RXA8	Streptococcus_phage	37.8	1.6e-14
VEE20710.1|693120_694536_-	ImpB/MucB/SamB family protein	NA	M1Q231	Streptococcus_phage	63.2	3.6e-171
VEE20711.1|694539_695217_-	putative transcriptional repressor	NA	Q6DMX1	Streptococcus_phage	46.1	4.7e-52
VEE20712.1|695359_695848_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE20713.1|695929_696469_+	methyltransferase	NA	NA	NA	NA	NA
VEE20714.1|696458_696953_+	phosphopantetheine adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	34.0	2.7e-17
>prophage 4
LR134291	Streptococcus gordonii strain NCTC7868 genome assembly, chromosome: 1	2196660	1583838	1593112	2196660	tRNA	Streptococcus_phage(88.89%)	11	NA	NA
VEE22221.1|1583838_1585839_-|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SEZ7	Hokovirus	31.8	1.0e-86
VEE22223.1|1586380_1587208_+	exodeoxyribonuclease	NA	M1PSC0	Streptococcus_phage	79.5	5.1e-125
VEE22225.1|1587219_1587606_+	glyoxalase	NA	NA	NA	NA	NA
VEE22227.1|1587633_1588263_-	endonuclease III	NA	NA	NA	NA	NA
VEE22229.1|1588357_1588711_-	ArsC family transcription regulator	NA	M1PLC0	Streptococcus_phage	61.5	1.4e-36
VEE22231.1|1588720_1589203_-	methylated-DNA-[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	62.7	7.2e-55
VEE22233.1|1589265_1590120_-	tetrapyrrole methylase family protein	NA	M1PLC5	Streptococcus_phage	65.1	5.9e-100
VEE22235.1|1590122_1590446_-	DNA replication intiation control protein YabA	NA	M1PFV3	Streptococcus_phage	71.0	1.5e-32
VEE22237.1|1590460_1591360_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	54.8	9.9e-82
VEE22239.1|1591356_1591995_-	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	65.6	1.3e-75
VEE22241.1|1592248_1593112_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	61.0	7.5e-95
>prophage 5
LR134291	Streptococcus gordonii strain NCTC7868 genome assembly, chromosome: 1	2196660	2089493	2099315	2196660		Streptococcus_phage(50.0%)	10	NA	NA
VEE23146.1|2089493_2091305_-	extracellular polysaccharide biosynthesis	NA	A0A1V0SAI8	Catovirus	28.5	1.0e-24
VEE23148.1|2091323_2092019_-	putative autophosphorylating protein tyrosine kinase	NA	A0A1X9I5D6	Streptococcus_phage	68.8	4.5e-82
VEE23150.1|2092028_2092724_-	MPA1 family polysaccharide export protein	NA	A0A1X9I5E1	Streptococcus_phage	57.4	2.3e-62
VEE23152.1|2092754_2093486_-	wzh/putative phosphotyrosine-protein phosphatase	NA	NA	NA	NA	NA
VEE23154.1|2093489_2094950_-	transcriptional regulator	NA	A0A1X9I5X1	Streptococcus_phage	63.2	7.8e-145
VEE23156.1|2095243_2095843_-	organic radical activating chaperone	NA	A0A0C5K925	Enterococcus_phage	59.1	8.1e-56
VEE23158.1|2095839_2096358_-	acetyltransferase	NA	NA	NA	NA	NA
VEE23160.1|2096367_2096871_-	acetyltransferase	NA	NA	NA	NA	NA
VEE23162.1|2096885_2097029_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE23164.1|2097110_2099315_-	anaerobic ribonucleoside triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.0	9.3e-283
