The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 2
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	108076	169460	2115408	bacteriocin,transposase,protease,tRNA	Staphylococcus_phage(33.33%)	52	NA	NA
VEE26606.1|108076_108466_+|transposase	transposase-like protein, IS1381 ISSpn7	transposase	NA	NA	NA	NA
VEE26608.1|108547_108862_+	fusion of IS1381 orf A and B	NA	NA	NA	NA	NA
VEE26610.1|108942_109659_+	carboxypeptidase	NA	NA	NA	NA	NA
VEE26612.1|109967_110393_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
VEE26614.1|110600_111290_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
VEE26616.1|111935_112307_-	chlorohydrolase	NA	NA	NA	NA	NA
VEE26618.1|112320_112683_+	Preprotein translocase subunit SecB	NA	NA	NA	NA	NA
VEE26620.1|112985_113318_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE26622.1|113727_114720_+	ATP-binding transport protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.6	1.8e-15
VEE26624.1|114721_115540_+	membrane protein	NA	NA	NA	NA	NA
VEE26626.1|115541_116327_+	ABC transporter permeae	NA	NA	NA	NA	NA
VEE26627.1|116579_116825_+	acetyltransferase	NA	NA	NA	NA	NA
VEE26628.1|117519_123954_+|protease	serine protease	protease	NA	NA	NA	NA
VEE26629.1|124579_125056_+	PTS system transporter subunit IIA	NA	NA	NA	NA	NA
VEE26631.1|125093_125399_+	PTS system IIB component (galactitol/fructose specific)	NA	NA	NA	NA	NA
VEE26633.1|125446_126922_+	PTS system galactitol-specific family transporter subunit IIC	NA	NA	NA	NA	NA
VEE26635.1|126947_127184_+	chlorohydrolase	NA	NA	NA	NA	NA
VEE26636.1|127271_133973_+	beta-galactosidase	NA	NA	NA	NA	NA
VEE26637.1|134220_134844_-|transposase	transposase	transposase	Q9MBP7	Staphylococcus_prophage	40.0	2.3e-05
VEE26638.1|134831_135077_-|transposase	transposase	transposase	Q9MBP7	Staphylococcus_prophage	43.6	1.5e-11
VEE26640.1|135287_135647_-	integral membrane protein	NA	NA	NA	NA	NA
VEE26642.1|135738_136191_+	radical SAM superfamily protein (pseudogene)	NA	NA	NA	NA	NA
VEE26644.1|136248_136695_+	putative Fe-S oxidoreductase	NA	A0A2H4PQV5	Staphylococcus_phage	50.4	4.2e-33
VEE26646.1|136678_137236_+	SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	40.9	2.4e-33
VEE26648.1|137228_137483_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE26650.1|137494_139549_+	Na+/H+ antiporter	NA	NA	NA	NA	NA
VEE26652.1|139727_140588_+	ribonuclease BN	NA	NA	NA	NA	NA
VEE26654.1|140798_141509_+	cytochrome c-type biogenesis protein	NA	NA	NA	NA	NA
VEE26656.1|141528_142095_+	thioredoxin	NA	NA	NA	NA	NA
VEE26658.1|142105_143218_+	peptide methionine sulfoxide reductase	NA	NA	NA	NA	NA
VEE26660.1|143440_144178_+	DNA-binding response regulator	NA	NA	NA	NA	NA
VEE26662.1|144174_145866_+	histidine kinase	NA	Q9EYF3	Enterobacteria_phage	32.7	9.4e-25
VEE26664.1|145981_146545_+	UPF0340 protein SSU05	NA	NA	NA	NA	NA
VEE26666.1|146566_152272_+|protease	zinc metalloprotease ZmpB	protease	NA	NA	NA	NA
VEE26668.1|152340_154062_+	chorismate binding enzyme para-aminobenzoate synthetase	NA	S4VT78	Pandoravirus	27.0	2.2e-29
VEE26670.1|154219_154786_+	Pneumococcal surface protein	NA	NA	NA	NA	NA
VEE26672.1|154985_155945_+	glucokinase	NA	NA	NA	NA	NA
VEE26674.1|156041_156881_+	thymidylate synthase	NA	U5J9N5	Bacillus_phage	55.0	3.6e-86
VEE26676.1|156928_157099_-	putative uncharacterized protein ORF 3	NA	NA	NA	NA	NA
VEE26678.1|157219_158104_+|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	tRNA	NA	NA	NA	NA
VEE26680.1|158096_159335_+	GTP-binding protein HflX	NA	NA	NA	NA	NA
VEE26682.1|159327_159951_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
VEE26684.1|159965_160895_+	hydrolase	NA	NA	NA	NA	NA
VEE26686.1|160915_161671_+	dehydrogenase	NA	NA	NA	NA	NA
VEE26688.1|161724_162693_-	transcriptional regulator	NA	A0A2H4J8I9	uncultured_Caudovirales_phage	28.9	1.5e-06
VEE26690.1|162696_162966_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
VEE26692.1|162965_163346_+	rhodanese family protein	NA	NA	NA	NA	NA
VEE26694.1|163434_163662_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE26696.1|163701_164427_-	ribosomal small subunit pseudouridine synthase A	NA	NA	NA	NA	NA
VEE26698.1|164588_166430_+	GTP-binding protein TypA	NA	NA	NA	NA	NA
VEE26700.1|166449_166704_+	membrane protein	NA	NA	NA	NA	NA
VEE26701.1|167438_169460_+|bacteriocin	bacteriocin-associated integral membrane protein	bacteriocin	NA	NA	NA	NA
>prophage 3
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	257590	368162	2115408	transposase,integrase,tRNA,protease	Streptococcus_phage(12.9%)	107	349195:349254	351600:352141
VEE26899.1|257590_259588_+|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SEZ7	Hokovirus	31.4	1.1e-83
VEE26901.1|259637_259829_+	N-ethylammeline chlorohydrolase	NA	NA	NA	NA	NA
VEE26903.1|259918_260239_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
VEE26905.1|260242_261058_+	membrane protein	NA	NA	NA	NA	NA
VEE26907.1|261132_262059_+	aldo/keto reductase family oxidoreductase	NA	NA	NA	NA	NA
VEE26909.1|262158_262395_+|tRNA	methionine--tRNA ligase	tRNA	NA	NA	NA	NA
VEE26911.1|262387_263086_+	short chain dehydrogenase	NA	A0A0K0KVL6	Prochlorococcus_phage	29.8	2.8e-07
VEE26913.1|263096_263576_+	NTP pyrophosphohydrolase including oxidative damage repair enzymes	NA	NA	NA	NA	NA
VEE26915.1|263583_264312_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
VEE26917.1|264347_265223_+	PEP-utilizing enzyme family protein	NA	NA	NA	NA	NA
VEE26919.1|265197_265638_+	acetyltransferase	NA	NA	NA	NA	NA
VEE26921.1|265760_268307_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	27.2	4.3e-74
VEE26923.1|268415_269090_+	DNA-binding response regulator CiaR	NA	W8CYM9	Bacillus_phage	33.6	3.1e-27
VEE26925.1|269079_270414_+	histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	34.0	1.2e-06
VEE26927.1|270447_270735_-	membrane protein	NA	NA	NA	NA	NA
VEE26929.1|270874_271804_+	U32 family peptidase	NA	NA	NA	NA	NA
VEE26931.1|272002_274453_+	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	47.5	6.4e-200
VEE26933.1|274489_275713_+	RodA	NA	NA	NA	NA	NA
VEE26935.1|275723_276278_+	4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein	NA	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	27.2	6.4e-07
VEE26937.1|276353_276926_+	phosphatase	NA	NA	NA	NA	NA
VEE26939.1|276940_278887_+	DNA gyrase subunit B	NA	G3M9Z3	Bacillus_virus	45.6	3.2e-146
VEE26941.1|278968_280696_+	septation ring formation regulator EzrA	NA	NA	NA	NA	NA
VEE26943.1|281511_281748_-|transposase	transposase, ISSmi4	transposase	NA	NA	NA	NA
VEE26945.1|282008_282308_-	Domain of uncharacterised function (DUF1827)	NA	NA	NA	NA	NA
VEE26947.1|282472_282895_-	mutT/nudix family protein	NA	NA	NA	NA	NA
VEE26949.1|283005_283335_+|transposase	IS630-Spn1, transposase Orf1	transposase	NA	NA	NA	NA
VEE26951.1|283532_283856_+|transposase	IS630-Spn1, transposase Orf2	transposase	NA	NA	NA	NA
VEE26953.1|284062_285025_-|protease	ATP-dependent Clp protease, ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	41.9	2.8e-66
VEE26954.1|285021_286320_-|protease	ATP-dependent Clp protease, ATP-binding subunit	protease	A0A1C3S747	Escherichia_phage	48.3	1.2e-67
VEE26956.1|286548_286779_-	Protein of uncharacterised function (DUF1797)	NA	NA	NA	NA	NA
VEE26958.1|286968_287652_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
VEE26960.1|287651_288386_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.2	2.5e-35
VEE26962.1|288539_289397_+	FolD bifunctional protein; includes: methylenetetrahydrofolate dehydrogenase, methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	41.9	2.3e-40
VEE26964.1|289538_290411_+	carbohydrate kinase	NA	NA	NA	NA	NA
VEE26966.1|290692_291376_+	ribose-5-phosphate isomerase A	NA	NA	NA	NA	NA
VEE26968.1|291389_292601_+	phosphopentomutase	NA	NA	NA	NA	NA
VEE26970.1|292602_293145_+	phosphopentomutase	NA	NA	NA	NA	NA
VEE26972.1|293160_293970_+	purine nucleoside phosphorylase	NA	NA	NA	NA	NA
VEE26974.1|294433_294841_+	topology modulation protein	NA	NA	NA	NA	NA
VEE26976.1|294850_295426_+	thiol-activated cytolysin	NA	NA	NA	NA	NA
VEE26978.1|295450_295963_+	pneumolysin	NA	NA	NA	NA	NA
VEE26980.1|296620_297331_+	purine nucleoside phosphorylase	NA	NA	NA	NA	NA
VEE26982.1|297353_297878_-	topology modulation protein	NA	A0A097BYE2	Leuconostoc_phage	40.6	3.4e-26
VEE26984.1|297931_298168_-	putative 30S ribosomal protein S20	NA	NA	NA	NA	NA
VEE26986.1|298235_299156_-	pantothenate kinase	NA	NA	NA	NA	NA
VEE26988.1|299345_299591_+	membrane protein (pseudogene)	NA	NA	NA	NA	NA
VEE26990.1|299928_300510_+	16S RNA G1207 methylase RsmC	NA	NA	NA	NA	NA
VEE26992.1|300506_301784_+	thymidine phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	51.5	1.8e-113
VEE26994.1|301801_302464_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
VEE26996.1|302450_302840_+	cytidine deaminase	NA	NA	NA	NA	NA
VEE26997.1|302930_303983_+	lipoprotein	NA	NA	NA	NA	NA
VEE26999.1|304126_305662_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.5	1.4e-19
VEE27001.1|305654_306713_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
VEE27003.1|306715_307672_+	ABC transporter, membrane-spanning permease	NA	NA	NA	NA	NA
VEE27005.1|307755_307941_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE27007.1|308102_308270_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE27009.1|308269_309103_+|transposase	IS3-Spn1, transposase	transposase	A0A1B1P773	Bacillus_phage	49.6	2.2e-59
VEE27011.1|309145_309787_-	putative glycerol-3-phosphate acyltransferase PlsY	NA	NA	NA	NA	NA
VEE27013.1|309922_311866_+	topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.9	1.2e-124
VEE27015.1|311865_311973_+	N-6 DNA methylase	NA	NA	NA	NA	NA
VEE27017.1|312321_314757_+	topoisomerase IV subunit A, ParC	NA	G3M9Z5	Bacillus_virus	31.3	9.5e-95
VEE27019.1|314888_315911_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
VEE27021.1|315966_316671_+	extracellular oligopeptide-binding protein	NA	NA	NA	NA	NA
VEE27023.1|316735_317425_+	permease	NA	NA	NA	NA	NA
VEE27025.1|317421_318345_+	permease	NA	NA	NA	NA	NA
VEE27027.1|318359_319004_+	pyroglutamyl-peptidase I	NA	NA	NA	NA	NA
VEE27029.1|319171_319402_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
VEE27031.1|319774_320977_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
VEE27033.1|321061_321565_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	89.7	5.2e-80
VEE27035.1|321561_321849_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	89.7	5.6e-23
VEE27037.1|321845_322217_-|transposase	degenerate transposase	transposase	A0A1S5SBP9	Streptococcus_phage	90.7	3.1e-50
VEE27039.1|322556_323054_+	GAF domain-containing protein	NA	NA	NA	NA	NA
VEE27041.1|323053_324709_+	DNA polymerase III subunits gamma and tau	NA	A0A1L2BWV7	Bacteriophage	33.5	1.9e-46
VEE27043.1|324736_324931_+	membrane protein	NA	NA	NA	NA	NA
VEE27045.1|325080_325851_+	ABC transporter ATPase	NA	A0A2R8FG22	Brazilian_cedratvirus	28.8	1.9e-09
VEE27047.1|325878_327141_+	FeS assembly protein SufD	NA	NA	NA	NA	NA
VEE27049.1|327151_328378_+	class-V aminotransferase	NA	Q2XUY6	environmental_halophage	44.8	1.9e-104
VEE27051.1|328364_328805_+	nifU family protein	NA	A0A2P1CJL8	Mycobacterium_phage	39.0	1.6e-13
VEE27053.1|328858_330271_+	Iron-sulfur cluster assembly protein SufB	NA	NA	NA	NA	NA
VEE27055.1|330501_331743_-	D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 3	NA	B6DZZ7	Stx2-converting_phage	25.5	1.1e-17
VEE27057.1|331845_332955_+	putative permease	NA	NA	NA	NA	NA
VEE27059.1|334267_335008_+	transcriptional repressor of fructose operon	NA	NA	NA	NA	NA
VEE27061.1|335004_335916_+	fructose-1-phosphate kinase	NA	NA	NA	NA	NA
VEE27063.1|335912_337865_+	PTS system, fructose specific IIBC component	NA	NA	NA	NA	NA
VEE27065.1|337950_340254_+	DNA translocase, cell division protein	NA	S5VNE3	Mycobacterium_phage	49.9	4.9e-85
VEE27067.1|340298_340733_-	TBC1 domain family member 8B	NA	NA	NA	NA	NA
VEE27069.1|340870_342013_+	class-V aminotransferase	NA	NA	NA	NA	NA
VEE27071.1|342021_343236_+	thiamine biosynthesis ATP pyrophosphatase	NA	NA	NA	NA	NA
VEE27073.1|343370_344195_+	Esterase	NA	NA	NA	NA	NA
VEE27075.1|344216_344552_+	esterase superfamily protein	NA	NA	NA	NA	NA
VEE27077.1|344548_344956_+	esterase	NA	NA	NA	NA	NA
VEE27079.1|344968_346135_+	carbamoylphosphate synthase large subunit	NA	NA	NA	NA	NA
VEE27081.1|346642_348136_+	type I restriction modification enzyme methylase subunit	NA	A0A2H4UVB0	Bodo_saltans_virus	31.8	3.0e-27
VEE27083.1|348148_348691_+	type I restriction-modification system subunit S	NA	NA	NA	NA	NA
VEE27085.1|348687_349806_+	type I RM modification enzyme	NA	NA	NA	NA	NA
349195:349254	attL	AAATCCCGATTTAACGAGATGTTTGGGGAAAATAAAATATTTGAAAGCATTGATAACTTA	NA	NA	NA	NA
VEE27087.1|349865_350102_+	toxin-antitoxin system, antitoxin component,AbrB family	NA	NA	NA	NA	NA
VEE27089.1|350098_350512_+	prophage maintenance system killer protein	NA	NA	NA	NA	NA
VEE27090.1|350629_351595_+|integrase	integrase/recombinase, phage integrase family protein	integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	29.6	1.8e-33
VEE27092.1|351617_352199_+	type I restriction-modification system subunit S	NA	NA	NA	NA	NA
351600:352141	attR	AAATCCCGATTTAACGAGATGTTTGGGGAAAATAAAATATTTGAAAGCATTGATAACTTATTTGATATTATAGATGGTGATAGGGGCAAAAATTATCCTAAATCAGATGAGTTGTTTAGTGAGGAGTACTGTTTATTTTTAAATACAAAGAATGTTACTAAAAACGGATTTTCATTCGATACAAAGCAATTTATCACTAAAACAAAGGATAAATTACTTCGAAAAGGCAAACTTGAGCGTTATGATATAGTCTTGACAACAAGAGGTACTGTTGGAAATGTAGCGTACTACGATGAATTAATAAAATATAAACATTTACGTATAAATTCAGGTATGGTAATATTACGTCCCAAGACACCAAATCTAAATCAGAAATTTATTATCCATGTTTTAAGGAATAATAATTATAGTCGAGTGATATCAGGAAGTGCTCAGCCTCAGTTACCAATTACAAAATTAAAAAAAATACTTCTCCCCCTCCCCCCACTAGCCCTCCAAAATGAGTTCGCAGACTTTGTAGCCCAGGTCGACAAATCACAATT	NA	NA	NA	NA
VEE27094.1|352228_355579_+	type I restriction-modification system R subunit	NA	A0A2H4P9W3	Gordonia_phage	24.8	3.1e-11
VEE27096.1|356119_356590_-	arginine repressor	NA	NA	NA	NA	NA
VEE27098.1|356606_358880_-	x-prolyl-dipeptidyl aminopeptidase	NA	NA	NA	NA	NA
VEE27100.1|359226_362328_+	DNA-polymerase III alpha-chain	NA	A0A291AWR1	Streptomyces_phage	33.5	1.3e-112
VEE27102.1|362410_363418_+	6-phosphofructokinase	NA	NA	NA	NA	NA
VEE27104.1|363476_364982_+	pyruvate kinase	NA	NA	NA	NA	NA
VEE27106.1|366799_367672_+	lipoprotein, putative	NA	NA	NA	NA	NA
VEE27108.1|367778_368162_-|transposase	transposase-like protein, IS1381 ISSpn7	transposase	NA	NA	NA	NA
>prophage 4
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	379660	436249	2115408	transposase,tRNA,integrase,holin,protease	Streptococcus_phage(40.0%)	60	435847:435862	436415:436430
VEE27136.1|379660_380059_-|transposase	transposase	transposase	NA	NA	NA	NA
VEE27138.1|380765_382241_+	ornithine decarboxylase family protein	NA	NA	NA	NA	NA
VEE27140.1|382798_382921_-|transposase	degenerate transposase	transposase	NA	NA	NA	NA
VEE27142.1|383176_384037_+	spermidine synthase	NA	NA	NA	NA	NA
VEE27144.1|384033_385293_+	dehydrogenase family protein, saccharopine dehydrogenase	NA	NA	NA	NA	NA
VEE27146.1|385292_386420_+	LysA-like decarboxylase, diaminopimelate decarboxylase putative	NA	NA	NA	NA	NA
VEE27148.1|386416_387502_+	agmatine deiminase	NA	M1HES8	Acanthocystis_turfacea_Chlorella_virus	47.5	2.0e-89
VEE27149.1|387511_388387_+	carbon-nitrogen hydrolase family protein	NA	M1H5W0	Paramecium_bursaria_Chlorella_virus	50.0	1.1e-77
VEE27151.1|388567_389377_-	Cof family protein	NA	NA	NA	NA	NA
VEE27153.1|389649_389871_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27155.1|389924_390596_+|protease	caax amino protease family protein	protease	NA	NA	NA	NA
VEE27157.1|390837_391746_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	27.7	1.4e-06
VEE27159.1|391742_392204_+	lipoprotein signal peptidase, signal peptidase type II	NA	NA	NA	NA	NA
VEE27161.1|392193_393081_+	23S rluA family pseudouridine synthase	NA	NA	NA	NA	NA
VEE27163.1|393083_394967_+|holin	choline binding protein E CbpE	holin	Q332B9	Clostridium_botulinum_C_phage	23.7	3.3e-10
VEE27165.1|395067_396177_+	gamma-glutamyl kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	1.4e-114
VEE27167.1|396186_397449_+	gamma-glutamyl phosphate reductase	NA	A0A1X9I5D4	Streptococcus_phage	64.3	4.2e-139
VEE27169.1|397452_398250_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.2	8.0e-59
VEE27171.1|398469_399108_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	68.1	9.8e-76
VEE27173.1|399104_399995_+	DNA polymerase III, delta' subunit	NA	M1NSC1	Streptococcus_phage	51.4	1.4e-72
VEE27175.1|400034_400352_+	DNA replication intiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
VEE27177.1|400354_401233_+	tetrapyrrole methylase	NA	M1PLC5	Streptococcus_phage	75.4	6.6e-115
VEE27179.1|401517_402852_+|tRNA	tRNA (uracil-5-)-methyltransferase Gid	tRNA	NA	NA	NA	NA
VEE27181.1|402935_403673_+	uridylate kinase	NA	NA	NA	NA	NA
VEE27183.1|403681_404239_+	ribosome-recycling factor	NA	NA	NA	NA	NA
VEE27185.1|404298_405153_+	s1 RNA binding domain protein	NA	NA	NA	NA	NA
VEE27187.1|405161_405377_+	serine-type D-Ala-D-Ala carboxypeptidase	NA	NA	NA	NA	NA
VEE27189.1|405462_406431_+	PhoH family protein	NA	W8D063	Erwinia_phage	47.9	5.9e-48
VEE27191.1|406623_407124_+	acetyltransferase	NA	NA	NA	NA	NA
VEE27193.1|407126_407270_+	TfoX N- domain family protein	NA	NA	NA	NA	NA
VEE27195.1|407752_408028_-	alanine dehydrogenase	NA	NA	NA	NA	NA
VEE27197.1|408438_408864_-	alanine dehydrogenase	NA	NA	NA	NA	NA
VEE27199.1|409040_409610_+	acetyltransferase	NA	NA	NA	NA	NA
VEE27201.1|409677_410328_+	competence protein	NA	NA	NA	NA	NA
VEE27203.1|410311_412552_+	competence protein CelB	NA	M1PSD2	Streptococcus_phage	52.2	7.5e-46
VEE27205.1|412950_413538_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.1	3.1e-15
VEE27207.1|413541_413817_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27209.1|413813_414722_+	ABC-type transport system involved in multi-copper enzyme maturation, permease component	NA	NA	NA	NA	NA
VEE27211.1|415591_415792_+	LSU ribosomal protein L35p	NA	NA	NA	NA	NA
VEE27213.1|415843_416203_+	LSU ribosomal protein L20p	NA	NA	NA	NA	NA
VEE27215.1|416260_416641_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
VEE27217.1|416890_417691_+	dihydroorotate dehydrogenase electron transfer subunit	NA	NA	NA	NA	NA
VEE27219.1|417701_418640_+	dihydroorotate dehydrogenase 1B	NA	NA	NA	NA	NA
VEE27221.1|418738_420715_+	endo-beta-N-acetylglucosaminidase	NA	A0A143FPM9	Bacillus_phage	42.6	8.4e-25
VEE27223.1|420775_422431_-	fibronectin/fibrinogen binding protein	NA	A0A1J0F9J4	Only_Syngen_Nebraska_virus	36.5	4.7e-05
VEE27225.1|422535_423033_+|protease	putative metalloprotease	protease	NA	NA	NA	NA
VEE27227.1|423013_423409_+	diacylglycerol kinase	NA	NA	NA	NA	NA
VEE27229.1|423425_424325_+	GTP-binding protein Era	NA	NA	NA	NA	NA
VEE27231.1|424373_425198_+	formamidopyrimidine-DNA glycosylase	NA	G3MA33	Bacillus_virus	34.5	1.2e-30
VEE27233.1|425197_425803_+	dephospho-CoA kinase	NA	NA	NA	NA	NA
VEE27235.1|425789_426989_+	multidrug resistance protein MdtG	NA	NA	NA	NA	NA
VEE27237.1|427177_427411_+	membrane protein involved in protein export SecG	NA	NA	NA	NA	NA
VEE27239.1|427512_429867_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	40.6	1.1e-90
VEE27241.1|429829_430297_+	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	60.1	4.2e-44
VEE27243.1|430312_431173_+	tellurite resistance protein TehB	NA	NA	NA	NA	NA
VEE27245.1|431245_432199_+	competence protein	NA	NA	NA	NA	NA
VEE27247.1|432217_434029_+	oligoendopeptidase F	NA	NA	NA	NA	NA
VEE27249.1|434030_434744_+	O-methyltransferase	NA	NA	NA	NA	NA
VEE27251.1|434810_435752_+	peptidyl-prolyl isomerase	NA	NA	NA	NA	NA
435847:435862	attL	CCCCAAAAGTTAGACA	NA	NA	NA	NA
VEE27253.1|435868_436249_-|integrase	integrase core subunit	integrase	A0A2I6AZV9	Macacine_betaherpesvirus	42.9	6.5e-19
VEE27253.1|435868_436249_-|integrase	integrase core subunit	integrase	A0A2I6AZV9	Macacine_betaherpesvirus	42.9	6.5e-19
436415:436430	attR	TGTCTAACTTTTGGGG	NA	NA	NA	NA
>prophage 5
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	446203	551485	2115408	transposase,tRNA	Streptococcus_phage(24.0%)	108	NA	NA
VEE27279.1|446203_446533_+|transposase	IS630-Spn1, transposase Orf1	transposase	NA	NA	NA	NA
VEE27281.1|447237_447654_+	surface anchored protein	NA	NA	NA	NA	NA
VEE27283.1|447884_448592_+	cytochrome c-type biogenesis protein CcdA	NA	NA	NA	NA	NA
VEE27285.1|448602_449160_+	thioredoxin	NA	NA	NA	NA	NA
VEE27287.1|449533_450925_+	amino acid permease family protein	NA	NA	NA	NA	NA
VEE27289.1|451067_451985_+	adhesion lipoprotein	NA	NA	NA	NA	NA
VEE27291.1|451992_454554_+	pneumococcal histidine triad protein B	NA	NA	NA	NA	NA
VEE27293.1|454764_457884_+	pneumococcal histidine triad protein E	NA	NA	NA	NA	NA
VEE27295.1|458109_458199_+	pneumococcal histidine triad protein E	NA	NA	NA	NA	NA
VEE27297.1|458893_459436_+	pneumococcal histidine triad protein E precursor, truncation	NA	NA	NA	NA	NA
VEE27299.1|459683_460313_+	Pneumococcal histidine triad protein D precursor	NA	NA	NA	NA	NA
VEE27301.1|460355_461576_-	peptidase T	NA	NA	NA	NA	NA
VEE27303.1|461730_462825_+	protoheme ferro-lyase	NA	NA	NA	NA	NA
VEE27305.1|462866_463244_-	large conductance mechanosensitive channel protein	NA	NA	NA	NA	NA
VEE27307.1|463325_463757_-	GtrA-like protein	NA	NA	NA	NA	NA
VEE27309.1|465191_466268_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
VEE27311.1|466323_467259_+	dihydrodipicolinate synthase	NA	NA	NA	NA	NA
VEE27313.1|467305_468679_-|tRNA	tRNA modification GTPase TrmE	tRNA	NA	NA	NA	NA
VEE27315.1|468814_468997_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
VEE27316.1|469120_469711_+	thymidine kinase	NA	A0A0K1Y4R8	Klebsiella_phage	48.9	4.7e-48
VEE27318.1|469707_470787_+	peptide chain release factor 1	NA	NA	NA	NA	NA
VEE27320.1|470786_471626_+	protein-(glutamine-N5) methyltransferase, release factor-specific	NA	NA	NA	NA	NA
VEE27322.1|471609_472212_+	Sua5/YciO/YrdC family protein	NA	NA	NA	NA	NA
VEE27324.1|472213_472645_+	acetyltransferase	NA	NA	NA	NA	NA
VEE27326.1|472706_473963_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.4	8.6e-100
VEE27328.1|473970_474945_+	Pseudouridylate synthase, 23S RNA-specific	NA	NA	NA	NA	NA
VEE27330.1|474944_475559_+	pneumococcal vaccine antigen A	NA	A0A1W6JSC2	Bacillus_phage	43.3	2.0e-25
VEE27332.1|475632_476607_+	extracellular protein	NA	NA	NA	NA	NA
VEE27334.1|476680_478312_+	23S rRNA (uracil-5-)-methyltransferase RumA	NA	A0A1X9I6F4	Streptococcus_phage	72.7	1.9e-192
VEE27336.1|479049_479268_+	putative transcriptional regulator	NA	NA	NA	NA	NA
VEE27338.1|479660_480686_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
VEE27340.1|480675_481683_+	iron-siderophore binding lipoprotein	NA	A0A2H4IY97	uncultured_Caudovirales_phage	26.4	7.6e-22
VEE27342.1|481682_482690_+	iron ABC transporter membrane-spanning permease	NA	NA	NA	NA	NA
VEE27344.1|482689_483484_+	ferric enterobactin transport ATP-binding protein FepC	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.0	6.4e-16
VEE27346.1|484051_484261_+	type II restriction endonuclease	NA	NA	NA	NA	NA
VEE27348.1|485224_485386_+	site-specific DNA recombinase	NA	NA	NA	NA	NA
VEE27350.1|485477_485984_+	site-specific DNA recombinase	NA	A0A2H4J992	uncultured_Caudovirales_phage	33.5	5.3e-16
VEE27352.1|485955_487161_+	site-specific recombinase, resolvase family protein	NA	C7F8K5	Bacillus_phage	28.7	3.8e-20
VEE27354.1|487428_487995_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27356.1|488319_488508_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27358.1|488569_489385_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27360.1|489384_490239_+	hydrolase	NA	NA	NA	NA	NA
VEE27362.1|490350_491235_+	sphingosine kinase	NA	NA	NA	NA	NA
VEE27364.1|491396_492101_+	neopullulanase	NA	NA	NA	NA	NA
VEE27366.1|492076_492532_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27368.1|492976_493453_+	transcriptional regulator	NA	NA	NA	NA	NA
VEE27370.1|493452_494214_+	signal recognition particle GTPase	NA	NA	NA	NA	NA
VEE27372.1|494241_494532_+	phosphoesterase	NA	NA	NA	NA	NA
VEE27374.1|494525_495398_+	SMC faily protein	NA	A0A1B1IUG5	uncultured_Mediterranean_phage	43.0	1.3e-09
VEE27376.1|496216_496576_+	Tn5252, Orf 10 protein	NA	NA	NA	NA	NA
VEE27378.1|496585_496951_+	Tn5252, Orf 9 protein	NA	NA	NA	NA	NA
VEE27380.1|496937_498788_+	Tn5252, relaxase	NA	NA	NA	NA	NA
VEE27382.1|499052_499721_+|transposase	degenerate transposase	transposase	NA	NA	NA	NA
VEE27384.1|499822_500008_+|transposase	degenerate transposase	transposase	NA	NA	NA	NA
VEE27386.1|500110_500479_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27388.1|501171_502125_-|transposase	IS1239 transposase	transposase	H7BWC8	unidentified_phage	34.9	8.1e-34
VEE27390.1|502483_502861_-|transposase	transposase (IS4 family)	transposase	NA	NA	NA	NA
VEE27392.1|502872_503298_-|transposase	transposase	transposase	NA	NA	NA	NA
VEE27394.1|503381_504095_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27396.1|504091_504727_+	chloramphenicol acetyltransferase	NA	NA	NA	NA	NA
VEE27398.1|504794_506432_+|tRNA	methionyl-tRNA synthetase	tRNA	A0A167RM67	Powai_lake_megavirus	32.0	2.5e-75
VEE27400.1|506532_507300_+	Protein tyrosine phosphatase	NA	NA	NA	NA	NA
VEE27402.1|508322_509309_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.9	8.8e-15
VEE27404.1|509310_510129_+	ABC-2 type transport system permease protein	NA	NA	NA	NA	NA
VEE27406.1|510130_510916_+	ABC transporter permease	NA	NA	NA	NA	NA
VEE27408.1|511548_511869_-|transposase	degenerate transposase	transposase	A0A1X9I5Z0	Streptococcus_phage	74.4	8.2e-23
VEE27410.1|512352_512568_-|transposase	degenerate transposase	transposase	A0A1X9I5Z0	Streptococcus_phage	82.2	5.2e-13
VEE27412.1|512991_513195_+	Cro/CI family transcriptional regulator	NA	A0A139ZPI6	Marinitoga_camini_virus	39.3	6.4e-05
VEE27414.1|513441_513591_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27416.1|513644_515438_+|tRNA	methionyl-tRNA synthetase	tRNA	A0A2I4R675	Erysipelothrix_phage	51.6	1.2e-150
VEE27418.1|515542_516130_+	peptidase	NA	NA	NA	NA	NA
VEE27420.1|516762_516957_+|transposase	transposase-like protein, IS1381 ISSpn7	transposase	NA	NA	NA	NA
VEE27422.1|517219_518449_+	cell division protein FtsW	NA	NA	NA	NA	NA
VEE27424.1|518469_521166_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
VEE27426.1|521578_522583_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
VEE27428.1|522651_523518_+	ABC transporter, membrane-spanning permease	NA	NA	NA	NA	NA
VEE27430.1|523514_524273_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.3	1.7e-13
VEE27432.1|524362_526123_+	DNA primase	NA	A0A1S5RH72	Helicobacter_phage	31.5	2.6e-46
VEE27434.1|526125_527235_+	RNA polymerase sigma factor RpoD	NA	F4YCU2	Synechococcus_phage	38.5	2.0e-36
VEE27436.1|527248_527578_+	metal-sulfur cluster biosynthesis protein	NA	NA	NA	NA	NA
VEE27438.1|527692_528736_+	glycosyl transferase CpoA	NA	NA	NA	NA	NA
VEE27440.1|528751_530077_+	glycosyltransferase, group 1 family protein	NA	NA	NA	NA	NA
VEE27442.1|530107_530284_+	putative stress-responsive transcriptional regulator	NA	NA	NA	NA	NA
VEE27444.1|530342_530477_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27446.1|530540_531851_+	GTP-binding protein	NA	NA	NA	NA	NA
VEE27448.1|531860_532019_+	putative extracellular protein	NA	NA	NA	NA	NA
VEE27450.1|533254_534514_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2	NA	NA	NA	NA	NA
VEE27452.1|534529_535081_+	acetyltransferase	NA	NA	NA	NA	NA
VEE27454.1|535073_536351_+	DRTGG domain/CBS domain-containing protein	NA	NA	NA	NA	NA
VEE27456.1|536366_537227_+	methionyl aminopeptidase	NA	NA	NA	NA	NA
VEE27458.1|537323_538004_+|transposase	degenerate transposase (orf1)	transposase	NA	NA	NA	NA
VEE27460.1|538020_538410_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE27462.1|538601_540893_+	ATP-dependent DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.1	9.5e-129
VEE27464.1|540935_541616_+	DNA repair protein RadC	NA	NA	NA	NA	NA
VEE27466.1|541612_542302_-	glutamine amidotransferase, class I	NA	NA	NA	NA	NA
VEE27468.1|542319_542961_-	DNA-binding protein	NA	NA	NA	NA	NA
VEE27470.1|543043_543259_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27472.1|543266_543614_-	cytosolic protein	NA	NA	NA	NA	NA
VEE27474.1|543618_544734_-	aminotransferase class-V	NA	H7BUW1	unidentified_phage	36.8	1.0e-27
VEE27476.1|544743_545703_-	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	32.8	9.3e-38
VEE27478.1|545815_546385_-	adenylate cyclase	NA	NA	NA	NA	NA
VEE27480.1|546512_547184_+	GTP pyrophosphokinase	NA	NA	NA	NA	NA
VEE27482.1|547167_547986_+	putative sugar kinase	NA	NA	NA	NA	NA
VEE27484.1|547982_548879_+	23S_rRNA pseudouridine synthase	NA	NA	NA	NA	NA
VEE27486.1|548922_549897_+	phosphotransacetylase	NA	NA	NA	NA	NA
VEE27488.1|550158_550686_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	93.7	1.2e-87
VEE27490.1|550682_550970_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	76.5	2.1e-25
VEE27492.1|550966_551485_-|transposase	degenerate transposase	transposase	A0A1S5SBP9	Streptococcus_phage	95.5	7.4e-82
>prophage 6
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	580003	707701	2115408	bacteriocin,transposase,tRNA,holin,protease	Bacillus_virus(10.34%)	116	NA	NA
VEE27542.1|580003_580333_-|transposase	IS630-Spn1, transposase Orf1	transposase	NA	NA	NA	NA
VEE27544.1|580761_584037_+	exonuclease RexB	NA	NA	NA	NA	NA
VEE27546.1|584033_587684_+	ATP-dependent exoDNAse subunit beta	NA	G3MA40	Bacillus_virus	25.3	8.8e-20
VEE27548.1|587943_589122_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27550.1|589330_595222_+|protease	immunoglobulin A1 protease	protease	NA	NA	NA	NA
VEE27552.1|595643_596495_+	GTP-binding protein	NA	NA	NA	NA	NA
VEE27554.1|596481_597261_+	ribonuclease HII	NA	E3T5H8	Cafeteria_roenbergensis_virus	42.0	2.8e-24
VEE27556.1|597276_598827_+	voltage-gated chloride channel family protein	NA	NA	NA	NA	NA
VEE27558.1|599401_600472_+	tyrosine recombinase	NA	A0A1B1IQT7	uncultured_Mediterranean_phage	29.9	3.1e-05
VEE27560.1|600544_601534_-	lipoate protein ligase A	NA	NA	NA	NA	NA
VEE27562.1|601597_603301_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
VEE27564.1|603346_604390_-	dihydrolipoamide acetyltransferase	NA	NA	NA	NA	NA
VEE27566.1|604607_605600_-	putative acetoin dehydrogenase	NA	NA	NA	NA	NA
VEE27569.1|605615_606584_-	acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha	NA	NA	NA	NA	NA
VEE27571.1|606737_608099_-	mate efflux family protein	NA	NA	NA	NA	NA
VEE27573.1|608109_608370_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27575.1|608383_609652_-	dihydroorotase	NA	NA	NA	NA	NA
VEE27577.1|609664_610129_-	Mutator mutT protein	NA	NA	NA	NA	NA
VEE27579.1|610138_610792_-	uracil-DNA glycosylase	NA	A0A286RUF9	Beluga_whale_alphaherpesvirus	38.8	9.5e-34
VEE27581.1|610927_611530_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27583.1|611587_612301_-	HAD superfamily hydrolase	NA	NA	NA	NA	NA
VEE27585.1|612759_613140_-	sugar phosphotransferase system (PTS), fructose family, IIA component	NA	NA	NA	NA	NA
VEE27587.1|613598_614381_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	89.7	1.7e-114
VEE27589.1|614377_614905_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	95.4	8.3e-89
VEE27591.1|615030_617523_-	streptococcal histidine triad protein PhpA	NA	NA	NA	NA	NA
VEE27593.1|617680_620134_-	pneumococcal histidine triad protein A precursor	NA	NA	NA	NA	NA
VEE27595.1|620387_622112_-	Phosphoenolpyruvate-protein phosphotransferase of PTS system	NA	NA	NA	NA	NA
VEE27597.1|622126_622390_-	Phosphotransferase system, phosphocarrier protein HPr	NA	NA	NA	NA	NA
VEE27599.1|622740_622959_+	nrdH-redoxin	NA	A0A0M7REK7	Lactobacillus_phage	45.9	2.0e-12
VEE27601.1|623039_625199_+	ribonucleoside-diphosphate reductase, alpha subunit	NA	A8E2R1	Enterococcus_phage	62.7	6.1e-263
VEE27603.1|625386_626349_+	ribonucleotide-diphosphate reductase, subunit beta	NA	A0A096XT60	Enterococcus_phage	68.4	2.0e-128
VEE27605.1|626530_627292_+	lactose phosphotransferase system repressor	NA	NA	NA	NA	NA
VEE27607.1|627561_627747_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27609.1|627789_629196_-	6-phospho-beta-galactosidase	NA	NA	NA	NA	NA
VEE27611.1|629404_631096_-	PTS system, lactose-specific IIBC	NA	NA	NA	NA	NA
VEE27613.1|631095_631413_-	PTS system lactose-specific transporter subunit IIA	NA	NA	NA	NA	NA
VEE27615.1|631448_632285_-	transcription antiterminator LacT	NA	NA	NA	NA	NA
VEE27617.1|632682_633225_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27619.1|633557_634538_-	tagatose 1,6-diphosphate aldolase	NA	NA	NA	NA	NA
VEE27621.1|634539_635469_-	tagatose-6-phosphate kinase	NA	NA	NA	NA	NA
VEE27623.1|635479_635995_-	galactose-6-phosphate isomerase subunit LacB	NA	NA	NA	NA	NA
VEE27625.1|636025_636451_-	galactose-6-phosphate isomerase subunit LacA	NA	NA	NA	NA	NA
VEE27627.1|636607_636952_-	protein LacX, plasmid	NA	NA	NA	NA	NA
VEE27629.1|637120_637510_-|transposase	transposase	transposase	NA	NA	NA	NA
VEE27631.1|637603_637927_-	mobile genetic element	NA	NA	NA	NA	NA
VEE27633.1|637934_638237_-	PTS system galactose-specific transporter subunit IIB	NA	NA	NA	NA	NA
VEE27635.1|638274_638751_-	PTS system transporter subunit IIA	NA	NA	NA	NA	NA
VEE27637.1|638931_639174_+	chlorohydrolase	NA	NA	NA	NA	NA
VEE27639.1|639254_641078_-	GTP-binding protein LepA	NA	A0A2K9L2P9	Tupanvirus	41.0	4.9e-19
VEE27641.1|641156_641885_-	serine/threonine protein phosphatase	NA	A0A1V0EC57	Caulobacter_phage	33.5	6.5e-15
VEE27643.1|641886_643554_-	DNA repair protein RecN	NA	NA	NA	NA	NA
VEE27645.1|643560_643953_-	transcriptional repressor protein	NA	NA	NA	NA	NA
VEE27647.1|643984_644800_-	rRNA methylase	NA	NA	NA	NA	NA
VEE27649.1|644792_645668_-	farnesyl diphosphate synthase	NA	NA	NA	NA	NA
VEE27651.1|645664_645877_-	exodeoxyribonuclease VII, small subunit	NA	NA	NA	NA	NA
VEE27653.1|645854_647195_-	exodeoxyribonuclease VII large subunit	NA	A0A1B3AYB4	Gordonia_phage	33.6	5.1e-34
VEE27656.1|647322_647961_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	39.9	8.4e-35
VEE27659.1|648068_648344_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
VEE27662.1|648367_648463_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
VEE27665.1|648611_649490_-|tRNA	tRNA pseudouridine synthase B	tRNA	NA	NA	NA	NA
VEE27668.1|649499_650774_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEE27671.1|650869_651994_-	O-acetylhomoserine sulfhydrylase	NA	NA	NA	NA	NA
VEE27674.1|652006_652129_-	O-acetylhomoserine sulfhydrylase	NA	NA	NA	NA	NA
VEE27677.1|652276_653074_-	formate/nitrate transporter	NA	NA	NA	NA	NA
VEE27680.1|653317_654061_-	sortase SrtA	NA	NA	NA	NA	NA
VEE27683.1|654060_656529_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.5	2.7e-105
VEE27686.1|656722_657709_+	L-lactate dehydrogenase 1	NA	NA	NA	NA	NA
VEE27689.1|657971_658745_-	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	49.0	3.1e-23
VEE27692.1|658791_659055_-	cytotoxic translational repressor of toxin-antitoxin stability system	NA	NA	NA	NA	NA
VEE27695.1|659047_659290_-	toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold protein	NA	NA	NA	NA	NA
VEE27698.1|659380_660190_-	metallo-beta-lactamase superfamily protein	NA	A0A0C5AFC1	Paenibacillus_phage	39.0	1.8e-34
VEE27701.1|660191_661541_-	histidine kinase	NA	W8CYF6	Bacillus_phage	34.6	1.8e-34
VEE27704.1|661533_662238_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	39.8	2.8e-39
VEE27707.1|662292_663468_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
VEE27710.1|663796_665467_-	formate-tetrahydrofolate ligase	NA	NA	NA	NA	NA
VEE27713.1|665696_666386_+	phosphopantothenate--cysteine ligase	NA	NA	NA	NA	NA
VEE27716.1|666397_666949_+	flavoprotein involved in panthothenate metabolism	NA	A0A068EHP1	Penguinpox_virus	37.6	3.1e-25
VEE27719.1|666932_667496_+	membrane protein	NA	NA	NA	NA	NA
VEE27722.1|667777_668305_+	membrane protein	NA	NA	NA	NA	NA
VEE27725.1|668316_668832_+	transcriptional regulator	NA	NA	NA	NA	NA
VEE27727.1|668828_669296_-	MutT/nudix family protein	NA	NA	NA	NA	NA
VEE27730.1|669348_669858_-	acetyltransferase, gnat family	NA	NA	NA	NA	NA
VEE27733.1|669823_670387_-	acetyltransferase	NA	NA	NA	NA	NA
VEE27736.1|670396_672385_-	excinuclease ABC subunit B	NA	NA	NA	NA	NA
VEE27738.1|672461_672731_-|protease	caax amino protease family protein	protease	NA	NA	NA	NA
VEE27741.1|672705_673416_-|protease	caax amino protease family protein	protease	NA	NA	NA	NA
VEE27744.1|673585_675751_+	glutamine ABC transporter permease	NA	NA	NA	NA	NA
VEE27747.1|675750_676491_+	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.1	2.0e-32
VEE27750.1|676639_678127_+	glucose-6-phosphate 1-dehydrogenase	NA	H6WFS4	Cyanophage	32.9	1.3e-70
VEE27753.1|678170_679460_-	cell division protein FtsY	NA	NA	NA	NA	NA
VEE27756.1|679463_680282_-	Cof family protein	NA	NA	NA	NA	NA
VEE27760.1|680281_681076_-	Cof family protein	NA	NA	NA	NA	NA
VEE27763.1|681072_684612_-	chromosome condensation and segregation SMC protein	NA	NA	NA	NA	NA
VEE27766.1|684602_685301_-	ribonuclease III	NA	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	33.8	3.9e-25
VEE27769.1|685618_686605_-	GMP reductase	NA	G3MBI2	Bacillus_virus	72.2	1.4e-137
VEE27772.1|686779_688123_-	McrBC 5-methylcytosine restriction system component	NA	NA	NA	NA	NA
VEE27775.1|688082_690014_-	endonuclease	NA	K4I1H4	Acidithiobacillus_phage	33.7	1.8e-16
VEE27778.1|690337_690454_-	translation factor	NA	NA	NA	NA	NA
VEE27781.1|690707_690851_-	putative translation factor (SUA5)	NA	NA	NA	NA	NA
VEE27784.1|691069_691429_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
VEE27787.1|691432_691702_-	membrane protein	NA	NA	NA	NA	NA
VEE27790.1|691698_692736_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
VEE27793.1|692747_693842_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	37.5	9.1e-05
VEE27796.1|693860_694517_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEE27799.1|694560_695193_-	copper homeostasis protein	NA	NA	NA	NA	NA
VEE27802.1|695285_695645_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
VEE27805.1|695750_697838_-	DNA topoisomerase I	NA	A0A1V0SCS0	Indivirus	37.6	1.0e-105
VEE27808.1|698004_699048_-	membrane protein	NA	NA	NA	NA	NA
VEE27811.1|699931_700780_-	DNA processing protein DprA	NA	S6BFL3	Thermus_phage	39.5	4.2e-34
VEE27814.1|700875_701565_-|holin	CTP:phosphocholine cytidylyltransferase	holin	A0A127AW70	Bacillus_phage	45.0	3.4e-05
VEE27817.1|701576_702455_-	drug/metabolite transporter (DMT) superfamily permease	NA	NA	NA	NA	NA
VEE27820.1|702444_703314_-|holin	choline kinase	holin	NA	NA	NA	NA
VEE27823.1|703330_704353_-	zinc-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
VEE27826.1|704357_705065_-	cytidylyltransferase	NA	NA	NA	NA	NA
VEE27829.1|705400_706888_+	teichoic acid subunit flippase	NA	NA	NA	NA	NA
VEE27832.1|706897_707701_+|holin	phosphorylcholine transferase LicD1	holin	A0A1V0SD50	Indivirus	27.1	5.3e-10
>prophage 7
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	729734	764435	2115408	transposase,bacteriocin,holin,protease	Staphylococcus_phage(33.33%)	40	NA	NA
VEE27892.1|729734_730916_-|holin	choline binding protein PcpA	holin	NA	NA	NA	NA
VEE27895.1|730928_732149_-	surface protein A	NA	NA	NA	NA	NA
VEE27898.1|732242_733097_+	rgg protein	NA	NA	NA	NA	NA
VEE27901.1|733328_733496_-|transposase	IS861, transposase OrfA	transposase	NA	NA	NA	NA
VEE27904.1|733776_734124_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
VEE27907.1|734242_734572_-	CrcB protein	NA	A0A2H4PQR0	Staphylococcus_phage	37.8	6.3e-10
VEE27910.1|734565_734940_-	CrcB protein	NA	NA	NA	NA	NA
VEE27913.1|734936_735203_-	chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
VEE27916.1|735318_735762_-	flavodoxin	NA	NA	NA	NA	NA
VEE27919.1|735865_736801_+	DHH subfamily 1 protein	NA	NA	NA	NA	NA
VEE27921.1|736896_737139_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
VEE27924.1|737195_737414_-	high-affinity Fe2+/Pb2+ permease	NA	NA	NA	NA	NA
VEE27927.1|737721_737973_-|transposase	transposase-like protein, ISSpn2	transposase	NA	NA	NA	NA
VEE27930.1|738498_739845_+	glutamate dehydrogenase	NA	NA	NA	NA	NA
VEE27933.1|740340_740511_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
VEE27936.1|740523_740871_-	multidrug resistance protein 1	NA	G9BWD6	Planktothrix_phage	42.5	1.5e-09
VEE27939.1|741296_741602_-|transposase	transposase-like protein, IS1381 ISSpn7	transposase	NA	NA	NA	NA
VEE27942.1|741716_742313_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE27945.1|742583_742880_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27948.1|742892_743036_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27951.1|743037_743325_-|bacteriocin	Tn5253 bacteriocine putative	bacteriocin	NA	NA	NA	NA
VEE27954.1|743909_744413_+|transposase	transposase subfamily protein	transposase	NA	NA	NA	NA
VEE27957.1|744421_745261_+|transposase	transposase-like protein, ISSpn1 ISSpn3	transposase	A0A1B1P773	Bacillus_phage	49.6	1.1e-63
VEE27960.1|745846_746458_-	ATP synthase, subunit D	NA	NA	NA	NA	NA
VEE27963.1|746480_747866_-	V-type H+-ATPase, subunit B	NA	NA	NA	NA	NA
VEE27966.1|747866_749642_-	V-type ATP synthase subunit A	NA	NA	NA	NA	NA
VEE27969.1|749704_750025_-	V-type H+-ATPase, subunit F	NA	NA	NA	NA	NA
VEE27972.1|750014_751022_-	V-type H+-ATPase, subunit C	NA	NA	NA	NA	NA
VEE27975.1|751086_751668_-	V-type H+-ATPase, subunit E	NA	NA	NA	NA	NA
VEE27978.1|751701_752178_-	V-type H+-ATPase, subunit K	NA	NA	NA	NA	NA
VEE27981.1|752193_754185_-	V-type H+-ATPase, subunit I	NA	NA	NA	NA	NA
VEE27984.1|754174_754498_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE27987.1|754522_755413_-	transcriptional regulator	NA	NA	NA	NA	NA
VEE27990.1|755569_756679_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
VEE27993.1|756718_758941_-	sialidase B	NA	NA	NA	NA	NA
VEE27996.1|758942_759401_-	beta-galactosidase subunit beta	NA	NA	NA	NA	NA
VEE27999.1|760988_761906_-	N-acetylneuraminate lyase	NA	NA	NA	NA	NA
VEE28002.1|761930_762632_-	N-acetylmannosamine-6-phosphate epimerase	NA	NA	NA	NA	NA
VEE28005.1|762636_763446_-	transcriptional regulator	NA	NA	NA	NA	NA
VEE28008.1|763847_764435_-|protease	Tn5253 CAAX amino terminal protease family	protease	NA	NA	NA	NA
>prophage 8
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	834507	886788	2115408	transposase,holin,tRNA	Bacillus_virus(15.0%)	60	NA	NA
VEE28228.1|834507_834897_-|holin	choline binding protein	holin	NA	NA	NA	NA
VEE28231.1|835631_835733_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE28234.1|836349_836901_-	GNAT family acetyltransferase	NA	NA	NA	NA	NA
VEE28237.1|837298_838123_-	NAD+ synthetase	NA	G3MA24	Bacillus_virus	57.5	1.8e-74
VEE28239.1|838119_839580_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	42.9	1.3e-102
VEE28242.1|839695_840184_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE28245.1|840173_840383_-	transcriptional repressor	NA	A0A1V0E021	Clostridioides_phage	47.4	2.0e-06
VEE28248.1|840768_841497_-	ABC-2 family transporter protein	NA	NA	NA	NA	NA
VEE28251.1|841512_842391_-	multidrug ABC transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	35.7	9.2e-24
VEE28254.1|842725_843451_-	peptidase, U32 family	NA	NA	NA	NA	NA
VEE28257.1|844025_845312_-	U32 family peptidase	NA	Q6DW11	Phage_TP	31.3	4.6e-40
VEE28260.1|845934_846117_+	restriction endonuclease (pseudogene)	NA	NA	NA	NA	NA
VEE28263.1|846300_846492_+	restriction endonuclease R.XbaI	NA	NA	NA	NA	NA
VEE28266.1|846488_847679_+	DNA modification methyltransferase M.XbaI	NA	S0A0D5	Cellulophaga_phage	38.4	5.4e-43
VEE28269.1|847754_849317_-	GMP synthase	NA	A0A1V0SH76	Hokovirus	32.8	1.4e-19
VEE28272.1|849458_850157_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
VEE28275.1|850199_851096_-	membrane protein	NA	NA	NA	NA	NA
VEE28278.1|851104_852040_-	beta-lactamase	NA	NA	NA	NA	NA
VEE28280.1|852036_852762_-	cppA protein	NA	NA	NA	NA	NA
VEE28283.1|852845_853481_-	lysophospholipase l1-like esterase	NA	A0A2K9L661	Tupanvirus	27.7	9.6e-07
VEE28286.1|853482_854310_-	hydrolase	NA	NA	NA	NA	NA
VEE28289.1|854331_854667_-	poly-gamma-glutamate biosynthesis protein	NA	NA	NA	NA	NA
VEE28292.1|854667_855384_-	CapA domain-containing protein	NA	A0A0N9SJ77	Staphylococcus_phage	31.1	2.3e-25
VEE28295.1|855906_856518_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
VEE28298.1|856562_857291_+	TrmH family RNA methyltransferase group 3	NA	NA	NA	NA	NA
VEE28301.1|857329_858241_-	thioredoxin reductase	NA	G3MA85	Bacillus_virus	51.5	1.0e-89
VEE28304.1|858306_858531_-	membrane associated protein	NA	NA	NA	NA	NA
VEE28307.1|858608_859352_-	aspartate/glutamate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.0	1.6e-29
VEE28310.1|859351_860152_-	aspartate/glutamate ABC transporter permease	NA	NA	NA	NA	NA
VEE28312.1|860309_860666_-	ArsC family protein	NA	M1PLC0	Streptococcus_phage	56.4	3.3e-33
VEE28315.1|860659_861190_-	O6-methylguanine-DNA methyltransferase	NA	M1PFU9	Streptococcus_phage	54.3	1.4e-46
VEE28318.1|861189_861684_-	acetyltransferase, GNAT family protein	NA	M1PSC3	Streptococcus_phage	52.1	1.1e-42
VEE28321.1|861818_862265_+	BS_ykrK family protein	NA	NA	NA	NA	NA
VEE28324.1|862261_862909_+	hlyIII superfamily protein	NA	NA	NA	NA	NA
VEE28327.1|862929_863511_-	glutamine amidotransferase subunit PdxT	NA	NA	NA	NA	NA
VEE28331.1|863511_864387_-	pyridoxal biosynthesis lyase PdxS	NA	NA	NA	NA	NA
VEE28334.1|864538_865918_-	NADH oxidase	NA	NA	NA	NA	NA
VEE28337.1|866212_867136_+	thiamine biosynthesis lipoprotein	NA	NA	NA	NA	NA
VEE28340.1|867195_867801_+	NADPH-dependent FMN reductase domain-containing protein	NA	A0A2P0ZL77	Lactobacillus_phage	53.7	2.2e-53
VEE28343.1|867819_869064_+	flavin reductase	NA	A0A2P0ZL82	Lactobacillus_phage	52.7	2.2e-55
VEE28346.1|869180_869438_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEE28349.1|869479_871516_-|tRNA	glycyl-tRNA synthetase beta subunit	tRNA	NA	NA	NA	NA
VEE28352.1|871727_872645_-|tRNA	glycyl-tRNA synthetase alpha subunit	tRNA	NA	NA	NA	NA
VEE28355.1|872838_873165_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE28357.1|873131_873416_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE28360.1|873688_874531_-	2,5-diketo-D-gluconic acid reductase A	NA	A0A2H4PQR8	Staphylococcus_phage	39.8	2.2e-51
VEE28363.1|874644_876087_-	peptidoglycan N-acetylglucosamine deacetylase A	NA	NA	NA	NA	NA
VEE28366.1|876270_876648_-	ribose-phosphate pyrophosphokinase	NA	NA	NA	NA	NA
VEE28369.1|876880_877858_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
VEE28372.1|877854_878937_+	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	30.8	3.1e-37
VEE28375.1|879000_879306_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
VEE28378.1|879448_879715_-|transposase	degenerate transposase	transposase	NA	NA	NA	NA
VEE28381.1|879711_879954_-|transposase	transposase	transposase	NA	NA	NA	NA
VEE28384.1|880337_881534_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	29.6	7.3e-32
VEE28387.1|882445_883315_-	glycerol facilitator-aquaporin	NA	NA	NA	NA	NA
VEE28390.1|883537_884218_-	cell wall surface anchor family protein	NA	NA	NA	NA	NA
VEE28393.1|884175_885282_-	putative sortase-sorted surface anchored protein (pseudogene)	NA	NA	NA	NA	NA
VEE28396.1|885392_885644_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE28399.1|886004_886538_-|transposase	degenerate transposase	transposase	NA	NA	NA	NA
VEE28401.1|886524_886788_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 9
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	952281	998699	2115408	transposase,tRNA,protease	Streptococcus_phage(23.53%)	53	NA	NA
VEE28579.1|952281_953466_-|tRNA	tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	32.1	6.8e-38
VEE28582.1|953477_954245_-	dihydrodipicolinate reductase	NA	NA	NA	NA	NA
VEE28585.1|954521_955370_-	DegV family protein	NA	NA	NA	NA	NA
VEE28588.1|955371_955746_-|transposase	transposase	transposase	NA	NA	NA	NA
VEE28591.1|955819_957172_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
VEE28594.1|957195_957975_-	lipoprotein, putative	NA	NA	NA	NA	NA
VEE28597.1|957961_958819_-	DNA integrity scanning protein DisA	NA	NA	NA	NA	NA
VEE28600.1|958954_959923_+	thioredoxin reductase	NA	Q9JRK7	Streptococcus_phage	100.0	2.8e-66
VEE28603.1|959956_960868_-	putative sporulation transcription regulator whiA	NA	Q7AWZ3	Streptococcus_phage	100.0	2.3e-155
VEE28606.1|960864_961842_-	transporter	NA	A1IMD5	Streptococcus_phage	100.0	1.2e-184
VEE28609.1|961838_962729_-	P-loop-containing kinase	NA	A0A0R8VB27	Thermobifida_phage	29.8	3.9e-06
VEE28612.1|962780_963161_-	endoribonuclease L-PSP	NA	NA	NA	NA	NA
VEE28615.1|963171_963759_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA	NA
VEE28618.1|963767_965000_-|protease	ATP-dependent Clp protease, ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.0	4.2e-131
VEE28621.1|965031_965202_-	membrane associated protein	NA	NA	NA	NA	NA
VEE28624.1|965201_965708_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	43.1	2.3e-27
VEE28627.1|965837_966356_-	DPS family peroxide resistance protein	NA	NA	NA	NA	NA
VEE28629.1|966851_968357_-	1,4-beta-N-acetylmuramidase	NA	NA	NA	NA	NA
VEE28632.1|968395_969154_-	triosephosphate isomerase	NA	NA	NA	NA	NA
VEE28635.1|969251_969929_-	DNA replication protein	NA	A0A1X9I617	Streptococcus_phage	41.3	2.9e-09
VEE28638.1|969937_970882_-	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
VEE28641.1|971063_971576_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	47.3	9.1e-32
VEE28644.1|971662_972421_-	methyltransferase type 11	NA	NA	NA	NA	NA
VEE28648.1|972921_974052_-	sugar ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.2	4.7e-20
VEE28650.1|974501_975077_-	amidases related to nicotinamidase	NA	G3MA16	Bacillus_virus	35.9	4.3e-22
VEE28653.1|975076_975865_-	GTP-sensing transcriptional pleiotropic repressor	NA	NA	NA	NA	NA
VEE28656.1|976128_977703_-	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.8	1.9e-59
VEE28659.1|977901_979128_-	major facilitator; oxalate:formate antiporter	NA	NA	NA	NA	NA
VEE28662.1|979320_980637_+	oxidoreductase, pyridine nucleotide-disulfide class I, Mercury (II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	44.1	2.2e-98
VEE28665.1|980735_982079_+	UDP-N-acetylmuramyl tripeptide synthetase, Mur ligase	NA	NA	NA	NA	NA
VEE28668.1|982078_982861_+	cobyric acid synthase	NA	NA	NA	NA	NA
VEE28671.1|982986_984069_+	X-Pro dipeptidase	NA	NA	NA	NA	NA
VEE28674.1|984389_984773_-|transposase	transposase-like protein, ISSpn1 ISSpn3	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	51.1	2.1e-20
VEE28677.1|984772_984940_-|transposase	IS3-Spn1 transposase	transposase	NA	NA	NA	NA
VEE28680.1|985075_985288_-|transposase	transposase orfA, ISSmu1	transposase	NA	NA	NA	NA
VEE28683.1|985514_985976_-	integral membrane protein	NA	NA	NA	NA	NA
VEE28686.1|985953_986727_-	phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
VEE28689.1|986716_987466_-|tRNA	tRNA pseudouridine synthase A	tRNA	NA	NA	NA	NA
VEE28692.1|987777_988929_-	major facilitator superfamily transporter-efflux	NA	NA	NA	NA	NA
VEE28695.1|989168_989798_-	membrane protein	NA	NA	NA	NA	NA
VEE28698.1|989800_990139_-	phnA protein	NA	NA	NA	NA	NA
VEE28701.1|990269_990941_-	cytidylate kinase	NA	NA	NA	NA	NA
VEE28704.1|990949_991426_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
VEE28707.1|991471_991684_+	ferredoxin	NA	NA	NA	NA	NA
VEE28710.1|991734_992718_-	glycosil transferase	NA	V5USA4	Oenococcus_phage	49.5	2.0e-75
VEE28713.1|992701_993721_-	UDP-glucose 4-epimerase	NA	A0A2K9L5H6	Tupanvirus	48.5	3.6e-88
VEE28717.1|993823_994015_-	chlorohydrolase	NA	NA	NA	NA	NA
VEE28721.1|994021_995125_-	oxidoreductase, DadA family protein	NA	NA	NA	NA	NA
VEE28724.1|995141_995939_-	NIF3 (NGG1p interacting factor 3) family protein	NA	NA	NA	NA	NA
VEE28727.1|995925_996603_-	Bcl-2 family protein	NA	NA	NA	NA	NA
VEE28730.1|996953_997058_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE28733.1|997387_998137_+	serine/threonine protein kinase	NA	NA	NA	NA	NA
VEE28736.1|998210_998699_-|transposase	IS3-Spn1 transposase, truncation	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	51.6	4.3e-39
>prophage 10
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	1225445	1277671	2115408	transposase,holin,integrase	Streptococcus_phage(33.33%)	45	1232001:1232017	1241225:1241241
VEE29406.1|1225445_1226966_-|holin	choline transporter	holin	NA	NA	NA	NA
VEE29409.1|1226958_1227687_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.2	9.0e-33
VEE29412.1|1227701_1228466_-	lipoprotein	NA	NA	NA	NA	NA
VEE29415.1|1228469_1228913_-	transcriptional regulator, MarR family	NA	NA	NA	NA	NA
VEE29418.1|1229594_1229891_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE29421.1|1229912_1230977_-	glutamyl aminopeptidase	NA	NA	NA	NA	NA
VEE29424.1|1231376_1232078_+	putative UDP-glucose 4-epimerase	NA	A0A2K9L1R4	Tupanvirus	36.5	1.6e-34
1232001:1232017	attL	AAAATATTTGGAGATGA	NA	NA	NA	NA
VEE29426.1|1232499_1233459_+	iron-compound ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	40.8	4.0e-57
VEE29429.1|1233448_1234405_+	ferric iron ABC transporter membrane-spanning permease	NA	NA	NA	NA	NA
VEE29432.1|1234401_1235154_+	ferrichrome transport ATP-binding protein FhuC	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.2	1.8e-12
VEE29435.1|1235249_1236215_+	iron-compound ABC transporter iron-compound-binding protein	NA	NA	NA	NA	NA
VEE29438.1|1236439_1236682_-	alpha-hemolysin family protein	NA	A0A2H4PQM5	Staphylococcus_phage	59.4	1.3e-17
VEE29441.1|1236681_1237404_-	ribosomal large subunit pseudouridine synthase B	NA	NA	NA	NA	NA
VEE29444.1|1237390_1237960_-	segregation and condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	34.9	5.0e-15
VEE29447.1|1237978_1238707_-	segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	22.3	6.9e-09
VEE29450.1|1238706_1239441_-|integrase	integrase	integrase	NA	NA	NA	NA
VEE29453.1|1239437_1239899_-	CBS domain-containing protein	NA	NA	NA	NA	NA
VEE29456.1|1239895_1240417_-	phosphodiesterase, family	NA	NA	NA	NA	NA
VEE29459.1|1240392_1241364_-	deoxyribonucleotide triphosphate pyrophosphatase/uncharacterised domain fusion protein	NA	C4N227	Ugandan_cassava_brown_streak_virus	29.9	4.9e-10
1241225:1241241	attR	TCATCTCCAAATATTTT	NA	NA	NA	NA
VEE29462.1|1241360_1242155_-	glutamate racemase, COG0796	NA	NA	NA	NA	NA
VEE29465.1|1242361_1242610_-	family protein	NA	NA	NA	NA	NA
VEE29468.1|1242865_1244491_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA	NA
VEE29472.1|1244668_1246636_-	trehalose PTS system, IIABC components	NA	NA	NA	NA	NA
VEE29475.1|1246820_1247531_+	trehalose operon repressor	NA	NA	NA	NA	NA
VEE29478.1|1247685_1248204_+|transposase	IS1167 transposase	transposase	A0A1S5SBP9	Streptococcus_phage	91.1	3.2e-77
VEE29480.1|1248200_1248488_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	68.2	4.8e-22
VEE29483.1|1248484_1249012_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	95.4	2.9e-89
VEE29486.1|1249086_1250013_-	oligopeptide ABC transporter ATP-binding protein AmiF	NA	G9BWD6	Planktothrix_phage	34.1	9.1e-22
VEE29488.1|1250023_1251091_-	peptide ABC transporter ATP-binding protein	NA	A0A2R8FFL6	Cedratvirus	24.4	3.0e-08
VEE29491.1|1251099_1252026_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
VEE29494.1|1252025_1253522_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
VEE29497.1|1253588_1255568_-	oligopeptide-binding protein AmiA	NA	NA	NA	NA	NA
VEE29500.1|1256254_1257448_-	O-Antigen Polymerase family	NA	NA	NA	NA	NA
VEE29503.1|1257585_1259028_-	sucrose phosphorylase	NA	NA	NA	NA	NA
VEE29506.1|1259385_1260219_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
VEE29509.1|1260232_1261099_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
VEE29512.1|1261112_1262372_-	sugar ABC transporter binding protein	NA	NA	NA	NA	NA
VEE29515.1|1262406_1264569_-	alpha-galactosidase	NA	NA	NA	NA	NA
VEE29518.1|1264676_1265537_+	Msm operon regulatory protein	NA	NA	NA	NA	NA
VEE29521.1|1265533_1266469_+	bifunctional protein, biotin operon repressor; biotin--[acetyl-CoA-carboxylase] synthetase	NA	NA	NA	NA	NA
VEE29524.1|1273372_1274728_-	RNA methyltransferase	NA	E4ZFI6	Streptococcus_phage	33.5	6.9e-71
VEE29527.1|1274765_1275542_+	regulatory protein RecX	NA	NA	NA	NA	NA
VEE29530.1|1275630_1276164_+	UPF0374 protein SSU05	NA	NA	NA	NA	NA
VEE29533.1|1276521_1276728_-	putative transcriptional regulator	NA	NA	NA	NA	NA
VEE29536.1|1276888_1277671_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	84.8	3.7e-117
>prophage 11
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	1448810	1586309	2115408	holin,transposase,protease,tRNA	Bacillus_phage(21.05%)	120	NA	NA
VEE30071.1|1448810_1449200_-|transposase	transposase	transposase	NA	NA	NA	NA
VEE30074.1|1449352_1449838_+	Uncharacterized conserved protein	NA	A0A291ATU0	Pandoravirus	34.6	1.3e-16
VEE30077.1|1449921_1450629_+	response regulator	NA	W8CYM9	Bacillus_phage	39.6	1.4e-38
VEE30080.1|1450629_1451961_+	histidine kinase PnpS	NA	W8CYF6	Bacillus_phage	34.9	1.9e-33
VEE30083.1|1452127_1453003_+	phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
VEE30086.1|1453120_1453984_+	phosphate ABC transporter permeae PstC	NA	NA	NA	NA	NA
VEE30089.1|1453976_1454792_+	phosphate ABC transporter	NA	NA	NA	NA	NA
VEE30092.1|1454793_1455546_+	phosphate transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	27.4	3.9e-15
VEE30095.1|1455560_1456211_+	phosphate transport system regulatory protein PhoU	NA	NA	NA	NA	NA
VEE30098.1|1456287_1456713_+|transposase	transposase, IS1380-Spn1 related, truncation	transposase	NA	NA	NA	NA
VEE30101.1|1456886_1457267_-	transcriptional regulator	NA	NA	NA	NA	NA
VEE30104.1|1457478_1458495_+	glycerol-3-phosphate dehydrogenase (NAD(P)+)	NA	NA	NA	NA	NA
VEE30107.1|1458516_1459416_+	UTP-glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	50.7	8.1e-76
VEE30110.1|1459833_1460766_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE30113.1|1460868_1461546_-	peptidase, S54	NA	NA	NA	NA	NA
VEE30116.1|1461529_1462069_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
VEE30119.1|1462080_1463211_-	GlpG protein (membrane protein of glp regulon)	NA	NA	NA	NA	NA
VEE30122.1|1463278_1463977_-	2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase	NA	NA	NA	NA	NA
VEE30125.1|1464206_1465118_-	drug/metabolite transporter (DMT) superfamily permease	NA	NA	NA	NA	NA
VEE30128.1|1465182_1467648_-	penicillin-binding protein 1B	NA	NA	NA	NA	NA
VEE30131.1|1467789_1469046_+|tRNA	tyrosine--tRNA ligase	tRNA	A0A2C9CYK4	Yersinia_phage	41.3	1.5e-75
VEE30134.1|1469123_1471187_-	P-type ATPase-metal/cation transporter	NA	E4ZFI9	Streptococcus_phage	26.0	4.5e-53
VEE30137.1|1471188_1471467_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE30140.1|1471611_1472460_+	23S_rRNA m1G745 methyltransferase	NA	NA	NA	NA	NA
VEE30143.1|1473315_1473876_+	membrane protein	NA	NA	NA	NA	NA
VEE30146.1|1474416_1474563_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE30149.1|1474920_1477179_-	maltodextrin phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	37.5	5.7e-09
VEE30152.1|1477204_1478722_-	4-alpha-glucanotransferase (amylomaltase)	NA	NA	NA	NA	NA
VEE30154.1|1479271_1480543_+	maltose/maltodextrin ABC transporter maltose /maltodextrin-binding protein	NA	NA	NA	NA	NA
VEE30157.1|1480653_1481946_+	maltodextrin ABC transporter permease	NA	NA	NA	NA	NA
VEE30164.1|1481947_1482790_+	maltodextrin ABC transporter permease	NA	NA	NA	NA	NA
VEE30167.1|1483042_1483843_+	malA-protein	NA	NA	NA	NA	NA
VEE30169.1|1483852_1484839_+	maltose operon transcriptional repressor	NA	NA	NA	NA	NA
VEE30172.1|1484905_1485217_+	N-ethylammeline chlorohydrolase	NA	NA	NA	NA	NA
VEE30176.1|1485220_1486162_-	YitT family protein	NA	NA	NA	NA	NA
VEE30179.1|1486139_1487903_-|tRNA	aspartyl-tRNA synthetase (aspartate-tRNA ligase)	tRNA	A0A1V0SJ84	Klosneuvirus	26.4	6.6e-13
VEE30182.1|1488021_1488348_-	chlorohydrolase	NA	NA	NA	NA	NA
VEE30185.1|1488389_1488620_-	excreted peptide	NA	NA	NA	NA	NA
VEE30188.1|1488637_1489279_-|protease	caax amino protease family protein	protease	NA	NA	NA	NA
VEE30191.1|1489290_1490025_-	brp/Blh family beta-carotene 15,15'-monooxygenase	NA	NA	NA	NA	NA
VEE30194.1|1490027_1490225_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE30198.1|1490224_1490440_-	transcriptional regulator	NA	NA	NA	NA	NA
VEE30201.1|1490440_1490755_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE30204.1|1491095_1492385_-|tRNA	histidyl-tRNA synthetase	tRNA	NA	NA	NA	NA
VEE30207.1|1492462_1493710_-	major facilitator superfamily permease	NA	NA	NA	NA	NA
VEE30210.1|1493900_1494752_-	transcriptional activator, Rgg/GadR/MutR family protein	NA	NA	NA	NA	NA
VEE30213.1|1494875_1495217_+	domain of uncharacterised function protein	NA	NA	NA	NA	NA
VEE30216.1|1495470_1497174_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
VEE30219.1|1497406_1498339_-	transketolase c-terminal section	NA	NA	NA	NA	NA
VEE30222.1|1498335_1499193_-	transketolase n-terminal section	NA	A0A2K9L6P9	Tupanvirus	31.2	7.1e-29
VEE30225.1|1499196_1500543_-	PTS system, IIC component	NA	NA	NA	NA	NA
VEE30228.1|1500555_1500840_-	PTS system, IIB component	NA	NA	NA	NA	NA
VEE30231.1|1500843_1502874_-	transcriptional regulator, BglG family	NA	NA	NA	NA	NA
VEE30234.1|1503064_1504072_+	integral membrane protein	NA	NA	NA	NA	NA
VEE30237.1|1504074_1504275_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE30240.1|1504426_1504609_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
VEE30243.1|1504624_1504774_+	LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent	NA	NA	NA	NA	NA
VEE30246.1|1505265_1507191_-|holin	choline binding protein PcpA	holin	NA	NA	NA	NA
VEE30248.1|1507525_1507708_+|transposase	degenerate transposase	transposase	NA	NA	NA	NA
VEE30251.1|1507652_1507886_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE30255.1|1508037_1508502_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE30258.1|1508580_1508838_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE30261.1|1509196_1511077_-	glycosyl hydrolase family 20 (GH20) protein	NA	NA	NA	NA	NA
VEE30264.1|1511070_1511952_-	ROK family protein	NA	NA	NA	NA	NA
VEE30267.1|1512023_1514669_-	alpha mannosidase	NA	NA	NA	NA	NA
VEE30270.1|1514859_1516140_-	twin-arginine translocation pathway signal	NA	NA	NA	NA	NA
VEE30273.1|1516310_1518395_+	sugar hydrolase	NA	NA	NA	NA	NA
VEE30276.1|1518434_1520114_-	FucA	NA	NA	NA	NA	NA
VEE30279.1|1520868_1522098_+	arginine deiminase	NA	NA	NA	NA	NA
VEE30282.1|1522155_1523172_+	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
VEE30286.1|1523336_1524284_+	carbamate kinase	NA	NA	NA	NA	NA
VEE30289.1|1524494_1526006_+	C4-dicarboxylate anaerobic carrier, arginine transporter	NA	NA	NA	NA	NA
VEE30292.1|1526027_1527359_+	ArcT	NA	NA	NA	NA	NA
VEE30295.1|1527763_1528054_-	surface protein (fragment)	NA	NA	NA	NA	NA
VEE30298.1|1528041_1528293_-	surface protein (fragment)	NA	NA	NA	NA	NA
VEE30301.1|1528691_1529591_-	spfh domain/band 7 family	NA	A0A1V0SL90	Klosneuvirus	32.5	4.1e-35
VEE30304.1|1529720_1530872_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
VEE30307.1|1531017_1532784_-	L-fucose isomerase	NA	NA	NA	NA	NA
VEE30310.1|1532796_1533525_-	L-fuculose phosphate aldolase	NA	NA	NA	NA	NA
VEE30313.1|1533539_1536557_-	Glycosyl hydrolase	NA	NA	NA	NA	NA
VEE30316.1|1536567_1538784_-	alpha-galactosidase AgaN	NA	NA	NA	NA	NA
VEE30319.1|1538805_1540677_-	F5/8 type C domain containing protein	NA	NA	NA	NA	NA
VEE30322.1|1540682_1542002_-	alpha-L-fucosidase	NA	NA	NA	NA	NA
VEE30325.1|1541998_1542838_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
VEE30328.1|1542840_1543770_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
VEE30331.1|1543856_1545149_-	bacterial extracellular solute-binding protein	NA	NA	NA	NA	NA
VEE30334.1|1545178_1546582_-	L-fuculose kinase fucK	NA	NA	NA	NA	NA
VEE30337.1|1546757_1547531_+	regulator of fucose operon	NA	NA	NA	NA	NA
VEE30340.1|1548700_1550206_-	ABC zinc transporter, metal-binding lipoprotein	NA	NA	NA	NA	NA
VEE30343.1|1550215_1551022_-	zinc ABC transporter permease	NA	NA	NA	NA	NA
VEE30346.1|1551014_1551719_-	ATP-binding protein, Mn	NA	W8CYL7	Bacillus_phage	26.8	2.5e-08
VEE30349.1|1551718_1552159_-	putative transcriptional repressor	NA	NA	NA	NA	NA
VEE30352.1|1552313_1553582_-	dltD protein	NA	NA	NA	NA	NA
VEE30355.1|1553574_1553814_-	D-alanyl carrier protein DCP	NA	NA	NA	NA	NA
VEE30358.1|1553827_1555072_-	transport protein DltB	NA	A0A125RNP0	Pseudomonas_phage	28.7	4.2e-22
VEE30361.1|1555068_1556619_-	D-alanine:Dcp ligase Dcl	NA	A0A2K9KZV5	Tupanvirus	28.4	6.1e-39
VEE30364.1|1557084_1558263_-	transporter major facilitator family protein	NA	NA	NA	NA	NA
VEE30367.1|1558934_1560101_-	reverse transcriptase/maturase, group FT II introns	NA	NA	NA	NA	NA
VEE30370.1|1560860_1561058_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE30373.1|1561138_1561798_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE30376.1|1562384_1563089_-	glycerol uptake facilitator protein	NA	M1HJ77	Paramecium_bursaria_Chlorella_virus	32.0	6.2e-23
VEE30379.1|1563158_1564985_-	alpha-glycerophosphate oxidase	NA	NA	NA	NA	NA
VEE30382.1|1565026_1566535_-	glycerol kinase	NA	NA	NA	NA	NA
VEE30385.1|1566693_1568103_-	regulatory protein	NA	NA	NA	NA	NA
VEE30388.1|1568285_1569158_+	heat shock protein 3HSP33 homolog	NA	NA	NA	NA	NA
VEE30391.1|1569144_1570125_+	NifR3 family TIM-barrel protein	NA	NA	NA	NA	NA
VEE30394.1|1570343_1572140_-	surface protein PspC	NA	NA	NA	NA	NA
VEE30397.1|1572343_1573126_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	91.0	1.3e-114
VEE30400.1|1573122_1573650_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	95.4	8.3e-89
VEE30403.1|1573853_1575911_-|holin	choline-binding surface protein A	holin	NA	NA	NA	NA
VEE30406.1|1575989_1576517_-	membrane protein	NA	NA	NA	NA	NA
VEE30409.1|1576599_1577940_-	signal transduction histidine kinase	NA	NA	NA	NA	NA
VEE30412.1|1577936_1578590_-	DNA-binding response regulator	NA	NA	NA	NA	NA
VEE30415.1|1578910_1581343_-|protease	ATP-dependent Clp protease, ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	40.6	3.8e-128
VEE30418.1|1581344_1581803_-	CtsR family transcriptional regulator	NA	NA	NA	NA	NA
VEE30421.1|1581921_1582650_-	nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.2	1.0e-28
VEE30425.1|1582649_1583657_-	ABC transportersubstrate-binding protein, nitrate/sulfonate/bicarbonate transport	NA	NA	NA	NA	NA
VEE30428.1|1583695_1584454_-	ABC transporter permease, nitrate/sulfonate/bicarbonate transport	NA	NA	NA	NA	NA
VEE30431.1|1584416_1584707_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEE30434.1|1584962_1586309_-|holin	choline binding protein D	holin	NA	NA	NA	NA
>prophage 12
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	1600779	1711689	2115408	bacteriocin,tail,transposase,tRNA,integrase,capsid,terminase,holin,portal,protease,head	Streptococcus_phage(68.92%)	113	1647606:1647626	1682267:1682287
VEE30487.1|1600779_1601619_-	cobalt ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.6	1.5e-15
VEE30495.1|1601603_1602431_-	ABCtransporter ATP-binding protein cobalt transport	NA	G9BWD6	Planktothrix_phage	32.9	2.8e-22
VEE30503.1|1602427_1602973_-	phosphatidylglycerophosphate synthase	NA	NA	NA	NA	NA
VEE30512.1|1602983_1603805_-	transcriptional regulation protein	NA	NA	NA	NA	NA
VEE30520.1|1603846_1605130_-|protease	zinc-dependent protease	protease	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	30.0	8.4e-18
VEE30523.1|1605126_1606377_-|protease	zinc-dependent protease	protease	A0A1X9I714	Streptococcus_phage	42.3	3.5e-93
VEE30526.1|1606535_1606904_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	57.3	7.0e-18
VEE30529.1|1606906_1608004_+	recombination protein recF	NA	NA	NA	NA	NA
VEE30532.1|1608054_1609533_-	inosine-5-monophosphate dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	2.2e-94
VEE30536.1|1609684_1610710_-|tRNA	tryptophanyl-tRNA synthetase	tRNA	NA	NA	NA	NA
VEE30539.1|1610915_1612538_+	ABC transporter ATPase	NA	A0A2K9L3Z8	Tupanvirus	26.2	3.4e-48
VEE30542.1|1612599_1615152_+	ABC transporter permease component	NA	NA	NA	NA	NA
VEE30545.1|1615594_1615933_-	phage infection protein	NA	NA	NA	NA	NA
VEE30548.1|1616017_1616785_-	integral membrane protein	NA	NA	NA	NA	NA
VEE30551.1|1616963_1617506_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
VEE30554.1|1617747_1618500_-	response regulator	NA	NA	NA	NA	NA
VEE30557.1|1618496_1619822_-	sensor histidine kinase	NA	NA	NA	NA	NA
VEE30559.1|1619842_1619968_-	competence stimulating peptide 2	NA	NA	NA	NA	NA
VEE30562.1|1620249_1620729_-	rRNA large subunit methyltransferase	NA	NA	NA	NA	NA
VEE30565.1|1620911_1622093_+|protease	trypsin-like serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	26.1	1.5e-16
VEE30568.1|1622165_1622909_+	chromosome partitioning protein	NA	S5VSZ7	Leptospira_phage	36.1	1.2e-16
VEE30571.1|1623121_1624483_+	DNA biosynthesis, initiation, binding protein	NA	NA	NA	NA	NA
VEE30574.1|1624641_1625778_+	DNA polymerase III, beta subunit	NA	A0A0A8IL17	Aurantimonas_phage	24.4	1.6e-23
VEE30577.1|1625842_1626037_+	Bacterial protein of uncharacterised function (DUF951)	NA	NA	NA	NA	NA
VEE30580.1|1626120_1627236_+	GTP-dependent nucleic acid-binding protein EngD	NA	NA	NA	NA	NA
VEE30582.1|1627306_1627876_+|tRNA	peptidyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
VEE30585.1|1627876_1631386_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
VEE30588.1|1631443_1631710_+	S4 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
VEE30591.1|1631702_1632071_+	cell division protein	NA	NA	NA	NA	NA
VEE30594.1|1632075_1632198_+	putative extracellular protein	NA	NA	NA	NA	NA
VEE30597.1|1632190_1633459_+	beta-lactamase	NA	NA	NA	NA	NA
VEE30600.1|1633455_1634733_+	MesJ/Ycf62 family protein	NA	A7K9Y8	Acanthocystis_turfacea_chlorella_virus	24.1	2.5e-06
VEE30603.1|1634736_1635279_+	hypoxanthine guanine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.5	9.4e-11
VEE30607.1|1635294_1637253_+	cell-division protein	NA	H8ZJI5	Ostreococcus_tauri_virus	45.8	3.2e-109
VEE30610.1|1637317_1638565_-|transposase	IS1167, transposase	transposase	A0A1S5SBP9	Streptococcus_phage	92.6	1.2e-221
VEE30613.1|1638788_1639268_+	competence-specific global transcription modulator	NA	NA	NA	NA	NA
VEE30616.1|1645234_1645441_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	91.2	7.9e-27
VEE30619.1|1645757_1645994_+	recombination regulator RecX	NA	NA	NA	NA	NA
VEE30622.1|1646182_1647511_+	adenylosuccinate synthetase	NA	L7Y4J5	Megavirus	37.1	3.6e-72
1647606:1647626	attL	CTTTTTCATAATAATCTCCCT	NA	NA	NA	NA
VEE30625.1|1647752_1648901_-|integrase	integrase	integrase	A0A1S5SEH2	Streptococcus_phage	100.0	1.6e-217
VEE30628.1|1649086_1650010_-	Exonuclease	NA	A0A1S5SEW3	Streptococcus_phage	100.0	3.5e-175
VEE30631.1|1650022_1650406_-	Phage protein	NA	A0A141DZD2	Streptococcus_phage	100.0	1.5e-66
VEE30634.1|1650418_1650784_-	putative phage DNA binding protein	NA	A0A1S5SEP7	Streptococcus_phage	100.0	3.2e-63
VEE30637.1|1651089_1651572_-	Uncharacterised protein	NA	A0A1S5S9P0	Streptococcus_phage	100.0	8.4e-80
VEE30640.1|1651626_1651830_+	putative phage DNA binding protein	NA	A0A1S5S9L1	Streptococcus_phage	100.0	1.2e-27
VEE30643.1|1651846_1652044_+	gp9	NA	A0A1S5SEL5	Streptococcus_phage	100.0	3.6e-29
VEE30646.1|1652053_1652206_+	Uncharacterised protein	NA	A0A1S5S8Z4	Streptococcus_phage	100.0	1.3e-18
VEE30649.1|1652159_1652819_-	Uncharacterised protein	NA	A0A1S5S8Z0	Streptococcus_phage	100.0	1.0e-120
VEE30652.1|1652872_1653589_+	gp15	NA	A0A141DZC7	Streptococcus_phage	100.0	4.7e-135
VEE30655.1|1653601_1653859_+	phage protein	NA	A0A1S5SEV6	Streptococcus_phage	100.0	1.2e-43
VEE30658.1|1653944_1654265_+	Putative phage lipoprotein	NA	A0A1S5SGB9	Streptococcus_phage	100.0	7.4e-48
VEE30661.1|1654280_1654577_+	gp18	NA	A0A141DZC5	Streptococcus_phage	100.0	8.9e-48
VEE30664.1|1654560_1655376_+	gp19	NA	E8ZDM9	Streptococcus_phage	91.8	1.5e-137
VEE30667.1|1655363_1655522_+	phage protein	NA	A0A1S5S9K7	Streptococcus_phage	100.0	2.8e-24
VEE30670.1|1655515_1656286_+	DNA replication protein	NA	A0A1S5S8G3	Streptococcus_phage	100.0	5.2e-140
VEE30673.1|1656300_1656495_+	Uncharacterised protein	NA	A0A1S5SAJ8	Streptococcus_phage	100.0	7.9e-29
VEE30676.1|1656494_1656722_+	phage protein	NA	A0A1S5SCL8	Streptococcus_phage	98.7	1.2e-39
VEE30679.1|1656714_1656819_+	phage protein	NA	A0A1S5SCN4	Streptococcus_phage	100.0	1.8e-11
VEE30682.1|1656848_1657016_+	phage protein	NA	A0A1S5SEY3	Streptococcus_phage	100.0	5.0e-24
VEE30685.1|1657343_1657697_+	prophage LambdaSa2, Cro/CI family transcriptional regulator	NA	A0A1S5SCQ5	Streptococcus_phage	100.0	1.4e-63
VEE30688.1|1657678_1658143_+	bacteriophage transcriptional activator	NA	A0A1S5SCN9	Streptococcus_phage	100.0	4.9e-85
VEE30691.1|1658251_1658794_+|integrase	prophage LambdaSa2, site-specific recombinase phage integrase family protein	integrase	A0A1S5SCL7	Streptococcus_phage	100.0	9.8e-101
VEE30694.1|1659683_1660172_+	Uncharacterised protein	NA	A0A1S5SCZ6	Streptococcus_phage	98.1	9.5e-79
VEE30697.1|1660164_1661877_+|terminase	prophage LambdaSa2, terminase large subunit	terminase	A0A1S5SCM6	Streptococcus_phage	100.0	0.0e+00
VEE30700.1|1661885_1663028_+|portal	phage portal protein, HK97 family	portal	A0A1S5SCP3	Streptococcus_phage	100.0	1.2e-217
VEE30703.1|1663074_1663617_+|protease	prophage LambdaSa2, protease	protease	A0A1S5SCT6	Streptococcus_phage	100.0	1.2e-98
VEE30706.1|1663631_1664885_+|capsid	Phage capsid family	capsid	A0A1S5SCZ2	Streptococcus_phage	100.0	4.4e-229
VEE30709.1|1664910_1665246_+	Uncharacterised protein	NA	A0A1S5SCM7	Streptococcus_phage	100.0	4.1e-57
VEE30712.1|1665242_1665548_+|head,tail	phage head-tail adaptor	head,tail	A0A1S5SCR5	Streptococcus_phage	100.0	9.5e-37
VEE30715.1|1665547_1665895_+	Uncharacterised protein	NA	A0A1S5SCP8	Streptococcus_phage	100.0	3.5e-59
VEE30718.1|1665881_1666226_+	bacteriophage pi2 protein 37	NA	A0A1S5SCM8	Streptococcus_phage	100.0	1.2e-59
VEE30721.1|1666239_1666908_+|tail	phi13 family phage major tail protein	tail	A0A1S5SD39	Streptococcus_phage	100.0	7.0e-125
VEE30724.1|1666909_1667386_+	Uncharacterised protein	NA	A0A1S5SD04	Streptococcus_phage	100.0	7.8e-86
VEE30727.1|1667572_1670311_+|tail	phage-related minor tail protein	tail	A0A1S5SD82	Streptococcus_phage	100.0	0.0e+00
VEE30730.1|1670307_1671030_+	phage protein	NA	A0A1S5SD49	Streptococcus_phage	99.6	6.2e-135
VEE30733.1|1671030_1678992_+	PblB	NA	A0A141E0W6	Streptococcus_phage	88.5	0.0e+00
VEE30736.1|1678988_1679105_+	phage protein	NA	A0A1S5SCF0	Streptococcus_phage	100.0	4.0e-12
VEE30739.1|1679085_1679289_+	phage protein	NA	A0A060QN53	Streptococcus_phage	100.0	1.3e-26
VEE30742.1|1679291_1679642_+	phage protein	NA	A0A1S5SCG9	Streptococcus_phage	100.0	4.7e-64
VEE30745.1|1679651_1680068_+|holin	putative holin 1	holin	A0A1S5SFD4	Streptococcus_phage	100.0	2.4e-67
VEE30748.1|1680071_1680404_+|holin	phage holin, LL-H family	holin	A0A1S5SAT2	Streptococcus_phage	100.0	2.5e-51
VEE30751.1|1680407_1681364_+	autolysin	NA	A0A1S5SB92	Streptococcus_phage	100.0	1.3e-145
VEE30754.1|1681632_1681812_-	DNA-binding protein	NA	Q3BLW4	Phage_SK137	96.6	2.1e-23
VEE30757.1|1681953_1682109_-	Uncharacterised protein	NA	C5J952	Streptococcus_phage	91.8	1.4e-15
VEE30760.1|1682372_1682840_+	cytidine/deoxycytidylate deaminase	NA	NA	NA	NA	NA
1682267:1682287	attR	CTTTTTCATAATAATCTCCCT	NA	NA	NA	NA
VEE30763.1|1683026_1683470_+	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	Q2WG49	Clostridium_botulinum_D_phage	47.3	2.1e-29
VEE30766.1|1683429_1683987_+	phosphoglycerate mutase family protein	NA	NA	NA	NA	NA
VEE30769.1|1684099_1685362_+	DNA repair protein	NA	NA	NA	NA	NA
VEE30772.1|1685434_1685932_+	carbonic anhydrase	NA	NA	NA	NA	NA
VEE30775.1|1686186_1686771_+	repair protein	NA	NA	NA	NA	NA
VEE30778.1|1686915_1687884_+	ribose-phosphate pyrophosphokinase	NA	A0A1V0SHF7	Hokovirus	34.7	4.0e-44
VEE30781.1|1688001_1688355_+|transposase	nuclease family transposase	transposase	NA	NA	NA	NA
VEE30785.1|1688569_1688947_+	competence-induced protein Ccs16	NA	NA	NA	NA	NA
VEE30788.1|1689413_1692083_+	DNA polymerase I - 3'-5' exonuclease and polymerase domains	NA	A0A218MKQ4	uncultured_virus	30.1	1.3e-57
VEE30791.1|1692167_1692605_+	CoA-binding protein	NA	NA	NA	NA	NA
VEE30794.1|1692645_1692984_+	chlorohydrolase	NA	NA	NA	NA	NA
VEE30797.1|1693012_1694023_-	membrane protein	NA	NA	NA	NA	NA
VEE30800.1|1694171_1695341_+	aspartate aminotransferase	NA	NA	NA	NA	NA
VEE30802.1|1695337_1696108_+	DNA repair protein RecO	NA	NA	NA	NA	NA
VEE30805.1|1696104_1697097_+	fatty acid/phospholipid synthesis protein	NA	NA	NA	NA	NA
VEE30808.1|1697102_1697336_+	acyl carrier protein	NA	A0A2I7RIC8	Vibrio_phage	40.6	3.3e-05
VEE30811.1|1697378_1697672_+|transposase	transposase-like protein, IS1381 ISSpn7	transposase	NA	NA	NA	NA
VEE30814.1|1697874_1698105_+|bacteriocin	bacteriocin BlpO	bacteriocin	NA	NA	NA	NA
VEE30817.1|1698482_1699001_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	95.8	3.2e-85
VEE30820.1|1698997_1699285_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	70.6	4.3e-23
VEE30823.1|1699281_1699800_-|transposase	degenerate transposase	transposase	A0A1S5SBP9	Streptococcus_phage	91.7	3.5e-79
VEE30826.1|1700233_1702387_+	competence factor transporting ATP-binding protein/permease ComA	NA	W8CYL7	Bacillus_phage	28.2	3.6e-45
VEE30829.1|1702399_1703749_+	competence factor transport protein ComB	NA	NA	NA	NA	NA
VEE30832.1|1703918_1704626_+	phosphoribosylaminoimidazole-succinocarboxamide synthetase	NA	A0A1D8KNF0	Synechococcus_phage	39.2	1.3e-41
VEE30835.1|1704827_1708553_+	phosphoribosylformylglycinamidine synthase II (FGAM synthetase)	NA	A6N228	Microbacterium_phage	25.8	1.3e-37
VEE30838.1|1708645_1710088_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	7.4e-55
VEE30840.1|1710124_1711147_+	phosphoribosylaminoimidazole synthetase	NA	A0A1D7SE90	Cyanophage	43.6	3.6e-64
VEE30843.1|1711143_1711689_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.0	7.4e-24
>prophage 13
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	1921086	1967420	2115408	integrase,transposase,protease	Pneumococcus_phage(20.0%)	45	1912748:1912778	1959332:1959362
1912748:1912778	attL	GTGGTTTGAAGAGATTTTCGAAGAGTATAAA	NA	NA	NA	NA
VEE31467.1|1921086_1921794_+|protease	caax amino protease family protein	protease	NA	NA	NA	NA
VEE31469.1|1921916_1922861_+	dihydropteroate synthase	NA	NA	NA	NA	NA
VEE31471.1|1922862_1924173_+	dihydrofolate synthetase	NA	NA	NA	NA	NA
VEE31473.1|1924165_1924720_+	GTP cyclohydrolase	NA	E7DN69	Pneumococcus_phage	43.8	3.7e-39
VEE31475.1|1924762_1925575_+	bifunctional folate synthesis protein	NA	NA	NA	NA	NA
VEE31477.1|1925619_1925937_-	Staphylococcal protein of uncharacterised function (DUF960)	NA	NA	NA	NA	NA
VEE31478.1|1926293_1926740_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
VEE31480.1|1926759_1927152_+	SSU ribosomal protein S9p (S16e)	NA	NA	NA	NA	NA
VEE31482.1|1927414_1928293_-|integrase	integrase/recombinase, phage integrase family	integrase	NA	NA	NA	NA
VEE31484.1|1928534_1929224_-	FtsK/SpoIIIE family protein	NA	A0A1S5SFB5	Streptococcus_phage	29.7	9.8e-05
VEE31486.1|1929310_1929781_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE31488.1|1929777_1930668_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE31490.1|1930870_1932082_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE31492.1|1932636_1932858_-|integrase	integrase/recombinase, phage integrase family	integrase	NA	NA	NA	NA
VEE31494.1|1933413_1934622_-	ATPase	NA	NA	NA	NA	NA
VEE31496.1|1935026_1935203_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEE31498.1|1935202_1935328_+	filamentation induced by cAMP protein fic	NA	NA	NA	NA	NA
VEE31500.1|1935603_1937817_+	glycosyl hydrolase, family 31	NA	NA	NA	NA	NA
VEE31502.1|1938038_1938515_-	gluthatione peroxidase	NA	NA	NA	NA	NA
VEE31504.1|1938737_1941938_+	hyaluronidase	NA	NA	NA	NA	NA
VEE31506.1|1942492_1942708_+|transposase	truncated IS200 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	38.2	1.9e-07
VEE31508.1|1943083_1943713_-	keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	NA	NA	NA	NA	NA
VEE31510.1|1943722_1944724_-	carbohydrate kinase, PfkB family	NA	NA	NA	NA	NA
VEE31512.1|1944754_1945396_-	galactose-6-phosphate isomerase subunit LacB	NA	NA	NA	NA	NA
VEE31514.1|1945414_1946230_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
VEE31516.1|1946500_1946935_+	PTS system sugar-specific transporter subunit EII	NA	NA	NA	NA	NA
VEE31518.1|1946946_1948137_+	glucuronyl hydrolase	NA	NA	NA	NA	NA
VEE31520.1|1948147_1948639_+	N-acetylgalactosamine-specific phosphotransferase EIIB	NA	NA	NA	NA	NA
VEE31522.1|1948653_1949433_+	PTS system, N-acetylgalactosamine-specific IIC component	NA	NA	NA	NA	NA
VEE31524.1|1949419_1950238_+	PTS system transporter subunit IID	NA	NA	NA	NA	NA
VEE31526.1|1950237_1950531_+	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
VEE31528.1|1950552_1952454_+	oligohyaluronate lyase	NA	NA	NA	NA	NA
VEE31530.1|1952513_1953515_+	sugar binding transcriptional regulator RegR	NA	NA	NA	NA	NA
VEE31532.1|1953624_1953960_-	membrane protein	NA	NA	NA	NA	NA
VEE31534.1|1953970_1954213_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEE31536.1|1954228_1954423_-	transcriptional regulator	NA	I3VYZ1	Thermoanaerobacterium_phage	42.6	7.2e-06
VEE31538.1|1954588_1955539_+	S-adenosyl-methyltransferase mraW	NA	NA	NA	NA	NA
VEE31540.1|1955550_1955868_+	cell division protein FtsL	NA	NA	NA	NA	NA
VEE31542.1|1955871_1958124_+	penicillin-binding protein 2X	NA	NA	NA	NA	NA
VEE31544.1|1958125_1959106_+	UDP-phosphate-UDP-MurNAc-pentapeptide phospho-MurNAc-pentapeptide transferase	NA	NA	NA	NA	NA
VEE31546.1|1959654_1961760_+	Group II intron maturase	NA	H6X3M6	Enterobacteria_phage	37.5	1.0e-116
1959332:1959362	attR	GTGGTTTGAAGAGATTTTCGAAGAGTATAAA	NA	NA	NA	NA
VEE31548.1|1962055_1962538_-	S-ribosylhomocysteinase	NA	NA	NA	NA	NA
VEE31550.1|1962632_1964117_-|protease	ATP-dependent Zn protease	protease	NA	NA	NA	NA
VEE31552.1|1964269_1965880_+	glucan 1,6-alpha-glucosidase	NA	NA	NA	NA	NA
VEE31554.1|1966010_1967420_-|transposase	IS1202 transposase	transposase	NA	NA	NA	NA
>prophage 14
LR134294	Streptococcus pneumoniae strain NCTC12977 genome assembly, chromosome: 1	2115408	1982613	2029792	2115408	holin,transposase,integrase,tRNA	Aeribacillus_phage(16.67%)	39	2012705:2012720	2020041:2020056
VEE31601.1|1982613_1982925_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE31604.1|1983517_1983676_+|transposase	transposase	transposase	NA	NA	NA	NA
VEE31607.1|1983874_1985857_+	oligopeptide ABC transporter oligopeptide-binding protein AliA	NA	NA	NA	NA	NA
VEE31610.1|1986156_1991484_+	endo-alpha-N-acetylgalactosaminidase	NA	NA	NA	NA	NA
VEE31614.1|1991650_1993810_-	penicillin-binding protein 1A	NA	NA	NA	NA	NA
VEE31617.1|1993806_1994403_-	recombination protein U	NA	A0A1L2JY30	Aeribacillus_phage	33.9	8.7e-18
VEE31620.1|1994468_1994996_+	UPF0398 protein SSU05	NA	NA	NA	NA	NA
VEE31623.1|1995065_1995395_+	cell division initiation protein	NA	NA	NA	NA	NA
VEE31626.1|1995880_1997038_+	N-6 adenine-specific DNA methylase	NA	NA	NA	NA	NA
VEE31629.1|1997050_1998445_+	Holliday junction-specific endonuclease	NA	NA	NA	NA	NA
VEE31632.1|1998520_1999945_+|holin	choline binding protein J	holin	M4QQM4	Ostreococcus_lucimarinus_virus	29.6	1.6e-41
VEE31635.1|1999956_2000646_+|holin	choline binding protein J	holin	NA	NA	NA	NA
VEE31638.1|2000743_2001709_+|holin	choline-binding protein F	holin	NA	NA	NA	NA
VEE31641.1|2001727_2002726_+|holin	choline binding protein J	holin	NA	NA	NA	NA
VEE31644.1|2002843_2004076_-	major facilitator superfamily permease	NA	NA	NA	NA	NA
VEE31647.1|2004234_2004705_-	lantibiotic modifying enzyme	NA	NA	NA	NA	NA
VEE31650.1|2005605_2005884_+|holin	choline binding protein C	holin	NA	NA	NA	NA
VEE31653.1|2006058_2006937_+	mevalonate kinase	NA	NA	NA	NA	NA
VEE31657.1|2006918_2007872_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
VEE31660.1|2007858_2008866_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
VEE31663.1|2008849_2009860_+	isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2	NA	NA	NA	NA	NA
VEE31666.1|2009937_2010636_+	transporter	NA	NA	NA	NA	NA
VEE31669.1|2010632_2011628_+	histidine kinase	NA	NA	NA	NA	NA
VEE31673.1|2011641_2012274_+	response regulator	NA	NA	NA	NA	NA
2012705:2012720	attL	AAAACAGTGTTTTGAG	NA	NA	NA	NA
VEE31676.1|2013182_2013422_+	V8-like Glu-specific endopeptidase	NA	NA	NA	NA	NA
VEE31679.1|2013418_2014324_+|holin	choline binding protein G	holin	NA	NA	NA	NA
VEE31682.1|2014342_2015365_+|holin	choline binding protein F	holin	NA	NA	NA	NA
VEE31685.1|2015644_2016043_+|integrase	integrase	integrase	C9E2L6	Enterococcus_phage	41.4	4.8e-20
VEE31688.1|2016203_2017487_+	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	NA	NA	NA	NA	NA
VEE31691.1|2017534_2019901_-	recombinase D	NA	A0A0K2FLP8	Brevibacillus_phage	27.2	5.3e-58
VEE31694.1|2020179_2020794_-	signal peptidase I	NA	NA	NA	NA	NA
2020041:2020056	attR	CTCAAAACACTGTTTT	NA	NA	NA	NA
VEE31697.1|2020797_2021679_-	ribonuclease HIII	NA	NA	NA	NA	NA
VEE31699.1|2021765_2022068_+|tRNA	seryl-tRNA synthetase	tRNA	NA	NA	NA	NA
VEE31702.1|2022064_2022613_+	CvpA family protein	NA	NA	NA	NA	NA
VEE31705.1|2022716_2025053_+	mismatch repair ATPase (MutS family)	NA	Q94M10	Lactobacillus_phage	55.1	1.3e-21
VEE31708.1|2025395_2026718_+	Na+/alanine symporter	NA	NA	NA	NA	NA
VEE31711.1|2026935_2027484_+	macrophage infectivity potentiator protein	NA	NA	NA	NA	NA
VEE31714.1|2027593_2028493_+	exfoliative toxin	NA	NA	NA	NA	NA
VEE31717.1|2028517_2029792_-|tRNA	seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	48.7	1.5e-91
