assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900636775.1_44087_G01	LR134312	Enterococcus faecalis strain NCTC8745 genome assembly, chromosome: 1	1	440524-441087	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	WYL,csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	Type II-B,Type II-C,Type II-A	GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC,GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC,GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	36,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	7,8,8	8	TypeII-B,TypeII-C,TypeII-A	WYL,csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	NA|78aa|up_4|LR134312.1_433858_434092_+,NA	NA|141aa|up_9|LR134312.1_427397_427820_-	COG0295, Cdd, Cytidine deaminase [Nucleotide transport and metabolism]	NA|507aa|up_8|LR134312.1_427948_429469_-	PRK14022, PRK14022, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase	NA|550aa|up_7|LR134312.1_429672_431322_+	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|245aa|up_6|LR134312.1_431430_432165_+	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|472aa|up_5|LR134312.1_432298_433714_+	TIGR01886, Beta-Ala-Xaa_dipeptidase, dipeptidase PepV	NA|78aa|up_4|LR134312.1_433858_434092_+	NA	cas9|1338aa|up_3|LR134312.1_434564_438578_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|289aa|up_2|LR134312.1_438578_439445_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|110aa|up_1|LR134312.1_439441_439771_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|220aa|up_0|LR134312.1_439771_440431_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|338aa|down_0|LR134312.1_441468_442482_-	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|318aa|down_1|LR134312.1_442717_443671_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|506aa|down_2|LR134312.1_443671_445189_+	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|152aa|down_3|LR134312.1_445330_445786_+	COG1438, ArgR, Arginine repressor [Transcription]	NA|507aa|down_4|LR134312.1_445819_447340_+	PLN02371, PLN02371, phosphoglucosamine mutase family protein	NA|185aa|down_5|LR134312.1_447350_447905_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|288aa|down_6|LR134312.1_448026_448890_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|729aa|down_7|LR134312.1_449232_451419_+	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family	NA|114aa|down_8|LR134312.1_451481_451823_+	PRK13676, PRK13676, YlbF/YmcA family competence regulator	NA|412aa|down_9|LR134312.1_451978_453214_+	cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain
GCA_900636775.1_44087_G01	LR134312	Enterococcus faecalis strain NCTC8745 genome assembly, chromosome: 1	2	1684831-1686120	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no		WYL,csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	Orphan	GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC,GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC,GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	36,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	19,19,14	19	Orphan	WYL,csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	NA,NA	NA|250aa|up_9|LR134312.1_1670732_1671482_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|234aa|up_8|LR134312.1_1671599_1672301_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|808aa|up_7|LR134312.1_1672430_1674854_-	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|404aa|up_6|LR134312.1_1675167_1676379_-	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|302aa|up_5|LR134312.1_1676407_1677313_-	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|327aa|up_4|LR134312.1_1677434_1678415_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|588aa|up_3|LR134312.1_1678494_1680258_-	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|578aa|up_2|LR134312.1_1680257_1681991_-	TIGR02857, transport_ATP-binding_protein, thiol reductant ABC exporter, CydD subunit	NA|338aa|up_1|LR134312.1_1681995_1683009_-	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|473aa|up_0|LR134312.1_1683005_1684424_-	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|288aa|down_0|LR134312.1_1686277_1687141_-	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain	NA|694aa|down_1|LR134312.1_1687225_1689307_-	PRK07726, PRK07726, DNA topoisomerase 3	NA|122aa|down_2|LR134312.1_1689437_1689803_-	pfam06279, DUF1033, Protein of unknown function (DUF1033)	NA|190aa|down_3|LR134312.1_1689900_1690470_-	pfam13305, WHG, WHG domain	NA|172aa|down_4|LR134312.1_1690602_1691118_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|413aa|down_5|LR134312.1_1691134_1692373_+	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|375aa|down_6|LR134312.1_1692552_1693677_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|115aa|down_7|LR134312.1_1693902_1694247_-	pfam08866, DUF1831, Putative amino acid metabolism	NA|382aa|down_8|LR134312.1_1694314_1695460_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|325aa|down_9|LR134312.1_1695616_1696591_-	PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional
GCA_900636775.1_44087_G01	LR134312	Enterococcus faecalis strain NCTC8745 genome assembly, chromosome: 1	3	2545008-2545081	3	CRISPRCasFinder	no		WYL,csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	Orphan	ATAGTTGGCGAGCAACAGAAAAAC	24	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	NA,NA|42aa|down_1|LR134312.1_2546468_2546594_-	NA|289aa|up_9|LR134312.1_2534091_2534958_-	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown]	NA|435aa|up_8|LR134312.1_2535125_2536430_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|423aa|up_7|LR134312.1_2536422_2537691_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|150aa|up_6|LR134312.1_2537899_2538349_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|51aa|up_5|LR134312.1_2538389_2538542_-	pfam13731, WxL, WxL domain surface cell wall-binding	NA|203aa|up_4|LR134312.1_2538493_2539102_-	pfam13731, WxL, WxL domain surface cell wall-binding	NA|236aa|up_3|LR134312.1_2539197_2539905_-	pfam13731, WxL, WxL domain surface cell wall-binding	NA|238aa|up_2|LR134312.1_2540300_2541014_-	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|904aa|up_1|LR134312.1_2541308_2544020_+	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]	NA|217aa|up_0|LR134312.1_2544034_2544685_+	TIGR01990, bPGM, beta-phosphoglucomutase	NA|198aa|down_0|LR134312.1_2545147_2545741_+	pfam18813, PBECR4, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4	NA|42aa|down_1|LR134312.1_2546468_2546594_-	NA	NA|324aa|down_2|LR134312.1_2547057_2548029_-	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|146aa|down_3|LR134312.1_2548203_2548641_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|185aa|down_4|LR134312.1_2548773_2549328_-	cd00555, Maf, Nucleotide binding protein Maf	NA|711aa|down_5|LR134312.1_2549352_2551485_-	COG0323, MutL, DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair]	NA|859aa|down_6|LR134312.1_2551516_2554093_-	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|124aa|down_7|LR134312.1_2554093_2554465_-	COG4550, COG4550, Predicted membrane protein [Function unknown]	NA|266aa|down_8|LR134312.1_2554552_2555350_-	pfam13277, YmdB, YmdB-like protein	NA|519aa|down_9|LR134312.1_2555509_2557066_-	PRK12704, PRK12704, phosphodiesterase; Provisional
