The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134327	Aggregatibacter aphrophilus strain NCTC5906 genome assembly, chromosome: 1	2337153	473	15939	2337153	transposase,head	Vibrio_phage(25.0%)	29	NA	NA
VEF40541.1|473_1046_-|head	phage head morphogenesis protein, SPP1 gp7 family	head	C9DGN7	Escherichia_phage	55.1	5.4e-57
VEF40543.1|1032_1836_-	Mu-like prophage protein gp29	NA	A0A0C4UQR8	Shigella_phage	44.4	3.9e-53
VEF40545.1|1835_2612_-	Mu-like prophage protein gp29	NA	A0A0C4UQR8	Shigella_phage	53.3	1.5e-57
VEF40547.1|2621_2975_-	Mu-like prophage FluMu protein gp28	NA	J9RWF2	Pseudomonas_phage	38.1	3.3e-09
VEF40549.1|2928_4179_-	Mu-like prophage FluMu protein gp28	NA	A0A2I7S9C5	Vibrio_phage	64.1	1.1e-147
VEF40551.1|4178_4748_-	Protein of uncharacterised function (DUF3486)	NA	A0A2I7S9D1	Vibrio_phage	45.8	8.5e-39
VEF40553.1|4899_5070_-	Uncharacterised protein	NA	A0A0C4UR00	Shigella_phage	60.0	2.2e-11
VEF40555.1|5188_5410_-	Protein of uncharacterised function (DUF2730)	NA	NA	NA	NA	NA
VEF40557.1|5406_5625_-	DnaK suppressor protein	NA	NA	NA	NA	NA
VEF40560.1|5744_5972_-	Protein of uncharacterised function (DUF2681)	NA	NA	NA	NA	NA
VEF40562.1|6022_6256_-	Protein of uncharacterised function (DUF2644)	NA	F6MIK0	Haemophilus_phage	62.3	2.4e-16
VEF40564.1|6915_7041_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF40566.1|7387_7540_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF40569.1|7565_8009_-	Mu-like prophage protein gp16	NA	NA	NA	NA	NA
VEF40571.1|7992_8322_-	Uncharacterised protein	NA	F6MIJ5	Haemophilus_phage	39.4	3.6e-13
VEF40573.1|8345_8531_-	Uncharacterised protein	NA	A0A0M3LPP6	Mannheimia_phage	58.5	4.4e-13
VEF40576.1|8644_9139_-	Protein of uncharacterised function (DUF551)	NA	NA	NA	NA	NA
VEF40577.1|9214_9703_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF40581.1|9705_10023_-	Uncharacterised protein	NA	A0A2P0P8L3	Salmonella_phage	44.4	1.1e-11
VEF40583.1|9986_10166_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF40585.1|10158_10350_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF40587.1|10510_10723_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF40589.1|10725_10926_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF40591.1|10936_11560_-	Protein of uncharacterised function (DUF3164)	NA	A0A0M3LQ92	Mannheimia_phage	62.7	2.6e-65
VEF40594.1|11575_11806_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF40596.1|11805_12723_-	Mu B transposition protein, C terminal	NA	M4M9P4	Vibrio_phage	42.5	4.3e-56
VEF40598.1|12757_14764_-|transposase	Bacteriophage Mu transposase	transposase	M4M9R2	Vibrio_phage	42.7	1.0e-142
VEF40600.1|14778_15030_-	DNA-binding transcriptional regulator Nlp	NA	F6MII4	Haemophilus_phage	75.6	2.7e-29
VEF40602.1|15240_15939_+	Uncharacterized HTH-type transcriptional regulator HI_1476	NA	F6MII3	Haemophilus_phage	59.9	5.3e-75
>prophage 2
LR134327	Aggregatibacter aphrophilus strain NCTC5906 genome assembly, chromosome: 1	2337153	302524	335571	2337153	transposase,head,tail	Pseudomonas_phage(29.63%)	44	NA	NA
VEF41183.1|302524_305311_-	Uncharacterised protein	NA	A0A2D1GNP9	Pseudomonas_phage	44.9	3.8e-188
VEF41185.1|305310_305517_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF41187.1|305520_305772_-	Uncharacterised protein	NA	A0A2D1GNV4	Pseudomonas_phage	63.2	2.1e-21
VEF41189.1|305784_306594_-	Uncharacterized conserved protein	NA	A0A2D1GNT2	Pseudomonas_phage	50.9	4.0e-74
VEF41191.1|306647_308339_-	Uncharacterised protein	NA	A0A125RNJ2	Pseudomonas_phage	35.6	4.4e-91
VEF41193.1|308344_309310_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF41196.1|309312_310308_-	Uncharacterised protein	NA	A0A0U3ECM0	Pseudomonas_phage	35.6	1.3e-37
VEF41198.1|310319_313619_-|tail	Phage-related minor tail protein	tail	A0A2D1GNK1	Pseudomonas_phage	30.0	1.2e-100
VEF41200.1|313834_314260_-	Uncharacterised protein	NA	A0A2D1GNY5	Pseudomonas_phage	36.5	6.2e-18
VEF41202.1|314344_315091_-	Uncharacterised protein	NA	A0A2D1GNQ7	Pseudomonas_phage	53.6	8.2e-66
VEF41204.1|315077_315263_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF41207.1|315265_315700_-	Mu-like prophage protein gp37	NA	A0A0C4UQU7	Shigella_phage	45.3	5.2e-28
VEF41209.1|315699_316107_-	Mu-like prophage protein gp36	NA	NA	NA	NA	NA
VEF41211.1|316106_316505_-	Mu-like prophage FluMu protein gp35	NA	NA	NA	NA	NA
VEF41213.1|316581_317508_-|head	Mu-like prophage major head subunit gpT	head	A0A0C4UQR9	Shigella_phage	53.9	1.9e-88
VEF41215.1|317507_318584_-	Mu-like prophage I protein	NA	C9DGP0	Escherichia_phage	43.9	2.4e-66
VEF41217.1|318770_319214_-	Mu-like prophage protein gpG	NA	G9BWH2	Planktothrix_phage	33.6	3.1e-12
VEF41219.1|319340_320678_-|head	phage head morphogenesis protein, SPP1 gp7 family	head	C9DGN7	Escherichia_phage	39.3	4.9e-85
VEF41221.1|320664_322245_-	Mu-like prophage protein gp29	NA	A0A0C4UQR8	Shigella_phage	50.8	7.9e-143
VEF41223.1|322254_323814_-	Mu-like prophage FluMu protein gp28	NA	A0A2I7S9C5	Vibrio_phage	61.3	3.7e-161
VEF41225.1|323813_324383_-	Protein of uncharacterised function (DUF3486)	NA	A0A2I7S9D1	Vibrio_phage	45.8	8.5e-39
VEF41227.1|324405_324705_-	Uncharacterised protein	NA	A0A0C4UR00	Shigella_phage	54.6	9.4e-21
VEF41229.1|324708_325044_-	Protein of uncharacterised function (DUF2730)	NA	NA	NA	NA	NA
VEF41231.1|325040_325259_-	DnaK suppressor protein	NA	NA	NA	NA	NA
VEF41232.1|325378_325663_-	Protein of uncharacterised function (DUF2681)	NA	NA	NA	NA	NA
VEF41234.1|325655_325889_-	Protein of uncharacterised function (DUF2644)	NA	F6MIK0	Haemophilus_phage	62.3	2.4e-16
VEF41236.1|325891_326125_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF41238.1|326125_326671_-	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	70.4	2.2e-76
VEF41240.1|326749_327169_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEF41242.1|327165_327639_-	Mu-like prophage protein gp16	NA	NA	NA	NA	NA
VEF41244.1|327622_328162_-	Uncharacterised protein	NA	A0A0M3LPP6	Mannheimia_phage	51.4	6.2e-47
VEF41246.1|328277_328772_-	Protein of uncharacterised function (DUF551)	NA	NA	NA	NA	NA
VEF41248.1|328774_329335_-	Uncharacterised protein	NA	A0A0M3LP85	Mannheimia_phage	26.5	1.2e-13
VEF41250.1|329337_329655_-	Uncharacterised protein	NA	A0A2P0P8L3	Salmonella_phage	44.4	1.1e-11
VEF41252.1|329618_329798_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF41254.1|329790_329982_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF41256.1|330142_330355_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF41258.1|330357_330558_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF41261.1|330568_331192_-	Protein of uncharacterised function (DUF3164)	NA	A0A0M3LQ92	Mannheimia_phage	62.7	2.6e-65
VEF41263.1|331207_331438_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF41265.1|331437_332355_-	Mu B transposition protein, C terminal	NA	M4M9P4	Vibrio_phage	42.5	4.3e-56
VEF41266.1|332389_334396_-|transposase	Bacteriophage Mu transposase	transposase	M4M9R2	Vibrio_phage	42.7	1.0e-142
VEF41268.1|334410_334662_-	DNA-binding transcriptional regulator Nlp	NA	F6MII4	Haemophilus_phage	75.6	2.7e-29
VEF41270.1|334872_335571_+	Uncharacterized HTH-type transcriptional regulator HI_1476	NA	F6MII3	Haemophilus_phage	59.9	5.3e-75
>prophage 3
LR134327	Aggregatibacter aphrophilus strain NCTC5906 genome assembly, chromosome: 1	2337153	1060795	1070845	2337153	integrase	Serratia_phage(16.67%)	8	1060721:1060737	1073433:1073449
1060721:1060737	attL	AAAACGACCGCACTTTT	NA	NA	NA	NA
VEF42584.1|1060795_1062811_+	DNA ligase	NA	A0A289ZTZ3	Serratia_phage	49.4	1.0e-142
VEF42586.1|1062996_1063575_-	Thymidine kinase	NA	A0A076YPF1	Citrobacter_phage	51.6	5.2e-52
VEF42589.1|1063577_1063811_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF42591.1|1063882_1064911_-	t(6)A37 threonylcarbamoyladenosine biosynthesis protein	NA	A0A0R6PI74	Moraxella_phage	58.6	6.1e-112
VEF42593.1|1065135_1065351_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
VEF42595.1|1065473_1067252_+	DNA primase	NA	A0A1S5RF71	Helicobacter_phage	31.6	5.6e-44
VEF42598.1|1067323_1069195_+	Sigma-70	NA	A0A2I7SAT0	Vibrio_phage	33.5	1.0e-35
VEF42601.1|1069603_1070845_+|integrase	Prophage CP4-57 integrase	integrase	A0A1B5FPC6	Escherichia_phage	38.0	8.3e-71
1073433:1073449	attR	AAAACGACCGCACTTTT	NA	NA	NA	NA
>prophage 4
LR134327	Aggregatibacter aphrophilus strain NCTC5906 genome assembly, chromosome: 1	2337153	2328349	2337105	2337153	tail	Pseudomonas_phage(100.0%)	9	NA	NA
VEF44963.1|2328349_2331136_-	Uncharacterised protein	NA	A0A2D1GNP9	Pseudomonas_phage	44.9	3.8e-188
VEF44965.1|2331135_2331342_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF44967.1|2331345_2331597_-	Uncharacterised protein	NA	A0A2D1GNV4	Pseudomonas_phage	63.2	2.1e-21
VEF44969.1|2331609_2332419_-	Uncharacterized conserved protein	NA	A0A2D1GNT2	Pseudomonas_phage	50.9	4.0e-74
VEF44972.1|2332472_2334164_-	Uncharacterised protein	NA	A0A125RNJ2	Pseudomonas_phage	35.6	4.4e-91
VEF44974.1|2334169_2334490_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF44976.1|2334666_2335134_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEF44978.1|2335938_2336133_-	Uncharacterised protein	NA	A0A0U3ECM0	Pseudomonas_phage	60.9	2.5e-06
VEF44980.1|2336340_2337105_-|tail	Phage-related minor tail protein	tail	A0A125RNI9	Pseudomonas_phage	30.0	4.2e-25
