The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134365	Cardiobacterium hominis strain NCTC10426 genome assembly, chromosome: 1	2670755	1040650	1124835	2670755	terminase,capsid,coat,plate,tRNA,portal,integrase,head,tail,protease	uncultured_Caudovirales_phage(12.9%)	93	1033527:1033564	1122209:1122246
1033527:1033564	attL	TCCCAGAGGGACAAGCATTGCTCGCGTAGCGAGAGAGG	NA	NA	NA	NA
VEG76933.1|1040650_1041823_+|integrase	Putative prophage CPS-53 integrase	integrase	A7X7X0	Dichelobacter_phage	52.1	1.2e-108
VEG76934.1|1041773_1042049_-	Predicted transcriptional regulator	NA	NA	NA	NA	NA
VEG76935.1|1042045_1042237_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76936.1|1042331_1042886_-	Uncharacterized protein conserved in bacteria	NA	A0A2I7RG30	Vibrio_phage	40.7	4.4e-24
VEG76937.1|1042932_1043202_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76938.1|1043350_1043614_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76939.1|1043610_1043925_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76940.1|1044143_1046822_-	DNA primase (bacterial type)	NA	A0A077K8T2	Ralstonia_phage	41.6	2.9e-206
VEG76941.1|1046834_1047419_-	Ogr/Delta-like zinc finger	NA	NA	NA	NA	NA
VEG76942.1|1047790_1048057_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76943.1|1048053_1048359_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76944.1|1048355_1048535_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76945.1|1048736_1049372_+	Uncharacterized HTH-type transcriptional regulator HI_1476	NA	J7I0S2	Pseudomonas_phage	35.5	1.1e-18
VEG76946.1|1049381_1049852_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76947.1|1049854_1050514_+	SPBc2 prophage-derived endonuclease yokF precursor	NA	A0A0R6PHV6	Moraxella_phage	37.0	5.8e-31
VEG76948.1|1050869_1051391_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76949.1|1051420_1051636_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76950.1|1052075_1052399_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76951.1|1052551_1053520_-	Phage protein D	NA	E5G6Q3	Salmonella_phage	39.8	2.5e-62
VEG76952.1|1053519_1053954_-	Phage protein U	NA	A0A2H4JG54	uncultured_Caudovirales_phage	48.4	1.5e-27
VEG76953.1|1053963_1056681_-|tail	Phage-related minor tail protein	tail	D4HTW4	Vibrio_phage	23.1	2.1e-10
VEG76954.1|1056744_1056936_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76955.1|1057124_1057448_-|tail	Phage tail protein E	tail	V9IQX8	Stenotrophomonas_phage	45.2	1.9e-11
VEG76956.1|1057472_1057979_-|tail	phage major tail tube protein	tail	D4HTW2	Vibrio_phage	39.3	1.5e-26
VEG76957.1|1057989_1059174_-|tail	Phage tail sheath protein	tail	Q9ZXK4	Pseudomonas_virus	60.0	8.9e-131
VEG76958.1|1059170_1059689_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76959.1|1059685_1060213_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76960.1|1060216_1061461_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76961.1|1061555_1061825_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76962.1|1061835_1063023_-	Uncharacterised protein	NA	A0A1B2LRR4	Wolbachia_phage	41.8	3.0e-78
VEG76963.1|1063025_1064963_-	Uncharacterised protein	NA	K4ICQ5	Acidithiobacillus_phage	43.8	8.0e-145
VEG76964.1|1064968_1065451_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76965.1|1065450_1066332_-|tail	Bacteriophage P2-related tail formation protein	tail	NA	NA	NA	NA
VEG76966.1|1066331_1067204_-	Uncharacterized homolog of phage Mu protein gp47	NA	K4HZB7	Acidithiobacillus_phage	45.6	7.4e-50
VEG76967.1|1067254_1067641_-	Gene 25-like lysozyme	NA	A0A077K8R5	Ralstonia_phage	44.9	2.8e-17
VEG76968.1|1067640_1067877_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76969.1|1067873_1068386_-|plate	Phage P2 baseplate assembly protein gpV	plate	NA	NA	NA	NA
VEG76970.1|1068382_1068832_-	Mu-like prophage protein gpG	NA	A4PE39	Ralstonia_virus	37.1	1.8e-12
VEG76971.1|1068840_1069254_-|tail	P2 phage tail completion protein R (GpR)	tail	A0A2H4J906	uncultured_Caudovirales_phage	31.5	5.9e-05
VEG76972.1|1069237_1069447_-	conjugal transfer protein TraR	NA	NA	NA	NA	NA
VEG76973.1|1069558_1069978_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76974.1|1069967_1070459_-	Phage-related lysozyme (muraminidase)	NA	A0A141GEY9	Brucella_phage	41.7	4.6e-17
VEG76975.1|1070418_1070847_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG76976.1|1070849_1071050_-	Phage Tail Protein X	NA	NA	NA	NA	NA
VEG76977.1|1071062_1071503_-|head	Phage head completion protein (GPL)	head	NA	NA	NA	NA
VEG76978.1|1071499_1071703_-	Predicted transcriptional regulator	NA	NA	NA	NA	NA
VEG76979.1|1071871_1072561_-|terminase	Phage small terminase subunit	terminase	E5FFI5	Burkholderia_phage	42.2	3.6e-31
VEG76980.1|1072564_1073581_-|capsid	phage major capsid protein, P2 family	capsid	A0A1S5NPT2	Burkholderia_phage	51.1	1.1e-84
VEG76981.1|1073590_1074370_-|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	capsid	A0A1S5NPS0	Burkholderia_phage	44.2	2.0e-46
VEG76982.1|1074467_1076291_+	Uncharacterized conserved protein	NA	E5FFI8	Burkholderia_phage	49.6	1.0e-170
VEG76983.1|1076305_1077334_+|portal	phage portal protein, PBSX family	portal	A0A2H4J922	uncultured_Caudovirales_phage	54.2	5.6e-97
VEG76984.1|1077398_1078226_-	Adenine-specific DNA methylase	NA	F6MIM2	Haemophilus_phage	51.3	2.2e-80
VEG76985.1|1079553_1081014_-|tRNA	Glutamyl-tRNA(Gln) amidotransferase subunit A	tRNA	NA	NA	NA	NA
VEG76986.1|1081010_1081301_-|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit C	tRNA	NA	NA	NA	NA
VEG76987.1|1081404_1082454_+	Rod shape-determining protein MreB	NA	F2Y0P3	Organic_Lake_phycodnavirus	25.2	7.9e-06
VEG76988.1|1082479_1083421_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
VEG76989.1|1083407_1083893_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
VEG76990.1|1083889_1085779_+	Peptidoglycan synthase FtsI precursor	NA	NA	NA	NA	NA
VEG76991.1|1085762_1086902_+	Rod shape-determining protein RodA	NA	NA	NA	NA	NA
VEG76992.1|1086898_1087906_+	Membrane-bound lytic murein transglycosylase B precursor	NA	NA	NA	NA	NA
VEG76993.1|1087902_1088574_+	RlpA-like protein precursor	NA	F5B3X9	Synechococcus_phage	59.6	2.7e-23
VEG76994.1|1088582_1089707_+	D-alanyl-D-alanine carboxypeptidase dacC precursor	NA	B6DZZ7	Stx2-converting_phage	38.9	8.3e-62
VEG76995.1|1089706_1090327_+	Octanoyltransferase	NA	NA	NA	NA	NA
VEG76996.1|1090378_1090627_+	50S ribosomal protein L31 type B	NA	NA	NA	NA	NA
VEG76997.1|1091220_1092582_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEG76998.1|1093047_1093383_-	Haemolysin-type calcium binding protein related domain	NA	NA	NA	NA	NA
VEG76999.1|1093572_1093968_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77000.1|1094753_1096475_-	Cyclolysin	NA	NA	NA	NA	NA
VEG77001.1|1096529_1096826_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77002.1|1097053_1097584_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77003.1|1097651_1097777_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77004.1|1097921_1099130_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77005.1|1099132_1100107_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77006.1|1100509_1101970_-	Outer membrane protein tolC precursor	NA	NA	NA	NA	NA
VEG77007.1|1101972_1103406_-	Hemolysin secretion protein D, plasmid	NA	NA	NA	NA	NA
VEG77008.1|1103468_1105538_-	RTX-I toxin determinant B	NA	W8CYL7	Bacillus_phage	27.9	5.7e-48
VEG77009.1|1106094_1107201_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77010.1|1107222_1111614_+	Cyclolysin	NA	A0A2H4JEI4	uncultured_Caudovirales_phage	36.4	1.8e-19
VEG77011.1|1112192_1113605_-	D-alanyl-D-alanine carboxypeptidase dacC precursor	NA	NA	NA	NA	NA
VEG77012.1|1113676_1114237_+	Protein of uncharacterised function (DUF615)	NA	NA	NA	NA	NA
VEG77013.1|1114279_1115179_-	50S ribosomal protein L3 glutamine methyltransferase	NA	NA	NA	NA	NA
VEG77014.1|1115235_1116363_+	pheromone autoinducer 2 transporter	NA	NA	NA	NA	NA
VEG77015.1|1116359_1117112_+	Probable phospholipid-binding lipoprotein mlaA precursor	NA	NA	NA	NA	NA
VEG77016.1|1117071_1118040_+	Putative ribosome biogenesis GTPase RsgA	NA	NA	NA	NA	NA
VEG77017.1|1118039_1118306_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77018.1|1118501_1118732_+	Exodeoxyribonuclease 7 small subunit	NA	NA	NA	NA	NA
VEG77019.1|1118728_1119532_+	Bicarbonate transport system permease protein CmpB	NA	NA	NA	NA	NA
VEG77020.1|1119540_1120242_+	Aliphatic sulfonates import ATP-binding protein SsuB	NA	G3M9Y6	Bacillus_virus	36.9	4.6e-26
VEG77021.1|1120241_1121003_+	Dam-replacing family	NA	A0A2P0QEG9	Haloarcula_hispanica_pleomorphic_virus	48.8	2.0e-06
VEG77022.1|1121034_1122171_+	NnrS protein	NA	NA	NA	NA	NA
VEG77023.1|1122382_1123492_-|coat	Spore coat polysaccharide biosynthesis protein spsA	coat	NA	NA	NA	NA
1122209:1122246	attR	CCTCTCTCGCTACGCGAGCAATGCTTGTCCCTCTGGGA	NA	NA	NA	NA
VEG77024.1|1123593_1124241_+	vancomycin high temperature exclusion protein	NA	NA	NA	NA	NA
VEG77025.1|1124295_1124835_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
>prophage 2
LR134365	Cardiobacterium hominis strain NCTC10426 genome assembly, chromosome: 1	2670755	1371628	1415343	2670755	tRNA,protease	Bacillus_phage(16.67%)	44	NA	NA
VEG77264.1|1371628_1372339_+|tRNA	tRNA (cmo5U34)-methyltransferase	tRNA	NA	NA	NA	NA
VEG77265.1|1372343_1373303_+|tRNA	tRNA (mo5U34)-methyltransferase	tRNA	NA	NA	NA	NA
VEG77266.1|1373439_1374669_-	Thiol:disulfide interchange protein DsbC precursor	NA	NA	NA	NA	NA
VEG77267.1|1374761_1375604_-	Tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	30.7	1.4e-29
VEG77268.1|1375653_1376988_+	ABC-type uncharacterized transport system	NA	NA	NA	NA	NA
VEG77269.1|1377061_1377529_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77270.1|1377577_1378396_+	Formamidopyrimidine-DNA glycosylase	NA	W5S5H6	Pithovirus	25.2	4.6e-09
VEG77271.1|1378621_1379926_+	ATP-dependent RNA helicase rhlE	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.2	3.9e-47
VEG77272.1|1380228_1380903_-	Inner membrane protein yebE	NA	NA	NA	NA	NA
VEG77273.1|1380958_1381462_+|protease	Predicted aspartyl protease	protease	NA	NA	NA	NA
VEG77274.1|1381781_1383158_+|protease	Uncharacterized metalloprotease yggG	protease	NA	NA	NA	NA
VEG77275.1|1383222_1383531_+	H-NS histone family	NA	NA	NA	NA	NA
VEG77276.1|1383598_1384006_+	purine nucleoside phosphoramidase	NA	NA	NA	NA	NA
VEG77277.1|1384020_1384893_+	Bifunctional protein FolD	NA	A0A249XZQ2	Enterococcus_phage	37.2	7.2e-29
VEG77278.1|1384933_1385461_+	Flavodoxin	NA	NA	NA	NA	NA
VEG77279.1|1385520_1385718_+	Uncharacterized conserved small protein	NA	NA	NA	NA	NA
VEG77280.1|1385717_1386323_+	Putative acetyltransferase SA2342	NA	NA	NA	NA	NA
VEG77281.1|1386343_1386829_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77282.1|1386870_1387860_+	Tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
VEG77283.1|1387952_1390013_+	ATP-dependent DNA helicase recG	NA	NA	NA	NA	NA
VEG77284.1|1390135_1390717_+	Modulator of drug activity B	NA	NA	NA	NA	NA
VEG77285.1|1390757_1391612_+	Transferrin binding protein-like solute binding protein	NA	NA	NA	NA	NA
VEG77286.1|1391621_1392122_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77287.1|1392130_1393156_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
VEG77288.1|1393228_1393729_+	Probable ferritin-1	NA	NA	NA	NA	NA
VEG77289.1|1393781_1395356_-	Na+/alanine symporter	NA	NA	NA	NA	NA
VEG77290.1|1395535_1396405_-	Uncharacterized protein/domain associated with GTPases	NA	NA	NA	NA	NA
VEG77291.1|1396850_1398362_-	GTP-binding protein YsxC	NA	NA	NA	NA	NA
VEG77292.1|1398358_1398766_-	acyl-CoA thioesterase YbgC	NA	NA	NA	NA	NA
VEG77293.1|1399208_1399865_-	UGMP family protein	NA	NA	NA	NA	NA
VEG77294.1|1399861_1401850_-	Probable ATP-dependent helicase dinG homolog	NA	A0A127AW80	Bacillus_phage	30.5	2.3e-83
VEG77295.1|1401851_1402829_-	type IV pilus biogenesis/stability protein PilW	NA	NA	NA	NA	NA
VEG77296.1|1403041_1405444_-	Murein polymerase	NA	NA	NA	NA	NA
VEG77297.1|1405465_1406242_-	Thymidylate synthase	NA	A0A1B3AY68	Gordonia_phage	68.3	3.1e-100
VEG77298.1|1406225_1407011_-	Prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
VEG77299.1|1407204_1407549_+	Uncharacterized conserved protein, contains double-stranded beta-helix domain	NA	NA	NA	NA	NA
VEG77300.1|1407596_1408295_-|protease	Putative Zn-dependent protease, contains TPR repeats	protease	NA	NA	NA	NA
VEG77301.1|1408449_1409397_-	Transaldolase	NA	A0A127KNC6	Cyanophage	31.1	1.5e-11
VEG77302.1|1409409_1409955_-	Uncharacterized protein conserved in bacteria	NA	K4F6C9	Cronobacter_phage	33.3	9.4e-11
VEG77303.1|1409960_1410263_-	Ascorbate-specific phosphotransferase enzyme IIB component	NA	NA	NA	NA	NA
VEG77304.1|1410520_1410832_-	NS1	NA	A7KV42	Bacillus_phage	62.9	4.0e-22
VEG77305.1|1411038_1413426_-|protease	Lon protease	protease	A0A0R6PGP8	Moraxella_phage	48.0	1.1e-196
VEG77306.1|1413443_1414691_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	55.2	2.6e-128
VEG77307.1|1414722_1415343_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.9	1.2e-57
>prophage 3
LR134365	Cardiobacterium hominis strain NCTC10426 genome assembly, chromosome: 1	2670755	1626178	1731940	2670755	terminase,capsid,plate,tRNA,portal,integrase,head,tail,protease	Burkholderia_phage(15.15%)	95	1615661:1615680	1731300:1731319
1615661:1615680	attL	GGCAACTTCACCCTGCCGCT	NA	NA	NA	NA
VEG77496.1|1626178_1628461_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	G9E6G3	Micromonas_pusilla_virus	39.3	5.3e-31
VEG77497.1|1628591_1629146_+	D-ribose-binding periplasmic protein precursor	NA	NA	NA	NA	NA
VEG77498.1|1629478_1630396_+	Ribokinase	NA	NA	NA	NA	NA
VEG77499.1|1630488_1631532_+	Nitronate monooxygenase	NA	NA	NA	NA	NA
VEG77500.1|1631700_1632630_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77501.1|1632800_1636556_-	Exodeoxyribonuclease V gamma chain	NA	NA	NA	NA	NA
VEG77502.1|1636651_1637587_+	putative transporter YfdV	NA	NA	NA	NA	NA
VEG77503.1|1637639_1639436_-	Uncharacterized peptidase SA1530	NA	A0A0P0I8D7	Acinetobacter_phage	50.4	9.3e-164
VEG77504.1|1639557_1641138_-	Di-/tripeptide transporter	NA	A0A0P0IY73	Acinetobacter_phage	35.0	4.2e-59
VEG77505.1|1641523_1642558_+	2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
VEG77506.1|1642820_1643852_+	2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
VEG77507.1|1643957_1645997_+	Sulfate transport system permease protein CysW	NA	NA	NA	NA	NA
VEG77508.1|1646014_1647085_+	Spermidine/putrescine import ATP-binding protein PotA	NA	G3M9Y6	Bacillus_virus	35.8	1.6e-30
VEG77509.1|1647148_1648060_-	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	NA	NA	NA	NA	NA
VEG77510.1|1648322_1651127_-	Glutamate-ammonia-ligase adenylyltransferase	NA	NA	NA	NA	NA
VEG77511.1|1651235_1653278_-	oligopeptide transporter, OPT family	NA	NA	NA	NA	NA
VEG77512.1|1653403_1654294_+|protease	Uncharacterized metalloprotease yggG	protease	NA	NA	NA	NA
VEG77513.1|1654575_1655040_+	Bacterioferritin	NA	NA	NA	NA	NA
VEG77514.1|1655049_1655529_+	Bacterioferritin	NA	NA	NA	NA	NA
VEG77515.1|1655685_1656915_+	Uracil transporter	NA	NA	NA	NA	NA
VEG77516.1|1656995_1657718_+	Putative NAD(P)H nitroreductase mhqN	NA	NA	NA	NA	NA
VEG77517.1|1657854_1659135_-	Sensor protein qseC	NA	NA	NA	NA	NA
VEG77518.1|1659131_1659809_-	Transcriptional regulatory protein BasR	NA	Q6XM27	Feldmannia_irregularis_virus	28.3	1.5e-05
VEG77519.1|1660039_1660675_-	Peptidase propeptide and YPEB domain	NA	NA	NA	NA	NA
VEG77520.1|1660764_1662132_-	H(+)/Cl(-) exchange transporter ClcA	NA	NA	NA	NA	NA
VEG77521.1|1662305_1670558_+	Endo-1,3-1,4-beta-glycanase ExsH	NA	A0A0F6YR57	Sinorhizobium_phage	46.3	4.3e-06
VEG77522.1|1670734_1671058_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77523.1|1671451_1672423_-	Ferric-pseudobactin 358 receptor precursor	NA	NA	NA	NA	NA
VEG77524.1|1672858_1673392_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77525.1|1673403_1673943_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEG77526.1|1673939_1674293_-	Arsenate reductase	NA	NA	NA	NA	NA
VEG77527.1|1674392_1675115_+	NADPH-flavin oxidoreductase	NA	NA	NA	NA	NA
VEG77528.1|1675111_1675387_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77529.1|1675440_1676517_+	PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK	NA	NA	NA	NA	NA
VEG77530.1|1676513_1677140_+	PTS-dependent dihydroxyacetone kinase, ADP-binding subunit dhaL	NA	NA	NA	NA	NA
VEG77531.1|1677139_1677607_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77532.1|1677634_1679248_-	Putative sulfate transporter ychM	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.0	1.1e-38
VEG77533.1|1680268_1681069_+|integrase	Putative prophage CPS-53 integrase	integrase	Q7M297	Enterobacteria_phage	37.8	5.4e-47
VEG77534.1|1681061_1681301_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77535.1|1681325_1681868_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77536.1|1682028_1682265_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77537.1|1682275_1682605_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77538.1|1682777_1682963_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77539.1|1682979_1685667_-	DNA primase (bacterial type)	NA	A0A077K8T2	Ralstonia_phage	43.0	3.0e-211
VEG77540.1|1685678_1686236_-	Ogr/Delta-like zinc finger	NA	NA	NA	NA	NA
VEG77541.1|1686232_1686565_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77542.1|1686512_1686779_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77543.1|1686775_1687081_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77544.1|1687077_1687257_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77545.1|1687528_1687918_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77546.1|1687918_1688488_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77547.1|1688490_1689240_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77548.1|1689287_1690373_+	Uncharacterised protein	NA	Q6SE88	Lactobacillus_prophage	38.6	1.6e-62
VEG77549.1|1690799_1691771_-	Phage protein D	NA	E5G6Q3	Salmonella_phage	38.0	1.8e-57
VEG77550.1|1691770_1692205_-	Phage protein U	NA	A0A2H4JG54	uncultured_Caudovirales_phage	50.0	4.0e-28
VEG77551.1|1692217_1694917_-|tail	phage tail tape measure protein, TP901 family, core region	tail	Q9AYV8	Lactococcus_phage	24.5	8.5e-12
VEG77552.1|1694976_1695228_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77553.1|1695437_1695743_-|tail	Phage tail protein E	tail	A0A2H4J944	uncultured_Caudovirales_phage	47.4	4.8e-12
VEG77554.1|1695758_1696265_-|tail	phage major tail tube protein	tail	D4HTW2	Vibrio_phage	37.4	1.5e-26
VEG77555.1|1696274_1697459_-|tail	Phage tail sheath protein	tail	Q9ZXK4	Pseudomonas_virus	60.3	5.8e-130
VEG77556.1|1697455_1697974_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77557.1|1697970_1698495_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77558.1|1698503_1699865_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77559.1|1699866_1700136_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77560.1|1700143_1701328_-	Uncharacterised protein	NA	A0A1B2LRR4	Wolbachia_phage	42.5	5.0e-81
VEG77561.1|1701324_1703256_-	Uncharacterised protein	NA	K4ICQ5	Acidithiobacillus_phage	45.5	2.1e-153
VEG77562.1|1703261_1703744_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77563.1|1703743_1704628_-|tail	Bacteriophage P2-related tail formation protein	tail	K4I1F8	Acidithiobacillus_phage	40.3	3.3e-29
VEG77564.1|1704627_1705467_-	Uncharacterized homolog of phage Mu protein gp47	NA	K4HZB7	Acidithiobacillus_phage	46.0	1.1e-53
VEG77565.1|1705536_1705902_-	Gene 25-like lysozyme	NA	A0A077K8R5	Ralstonia_phage	45.8	1.0e-16
VEG77566.1|1705937_1706450_-|plate	Phage P2 baseplate assembly protein gpV	plate	NA	NA	NA	NA
VEG77567.1|1706446_1706908_-	Mu-like prophage protein gpG	NA	K4NZQ8	Burkholderia_phage	38.7	3.0e-18
VEG77568.1|1706904_1707402_-|tail	P2 phage tail completion protein R (GpR)	tail	NA	NA	NA	NA
VEG77569.1|1707631_1708057_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77570.1|1708046_1708538_-	Phage-related lysozyme (muraminidase)	NA	A0A075DXC6	Acinetobacter_phage	35.4	8.8e-16
VEG77571.1|1708534_1708927_-	Uncharacterised protein	NA	A0A0P0IVR6	Acinetobacter_phage	33.6	3.4e-10
VEG77572.1|1708929_1709139_-	Phage Tail Protein X	NA	NA	NA	NA	NA
VEG77573.1|1709153_1709588_-|head	Phage head completion protein (GPL)	head	NA	NA	NA	NA
VEG77574.1|1709755_1710427_-|terminase	Phage small terminase subunit	terminase	E5FFI5	Burkholderia_phage	40.0	3.1e-32
VEG77575.1|1710430_1711447_-|capsid	phage major capsid protein, P2 family	capsid	A0A1S5NPT2	Burkholderia_phage	52.7	4.8e-85
VEG77576.1|1711459_1712236_-|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	capsid	A0A1S5NPS0	Burkholderia_phage	43.5	3.5e-43
VEG77577.1|1712370_1714158_+	Uncharacterized conserved protein	NA	E5FFI8	Burkholderia_phage	49.5	3.7e-165
VEG77578.1|1714166_1715165_+|portal	phage portal protein, PBSX family	portal	A0A2H4J922	uncultured_Caudovirales_phage	53.9	2.9e-98
VEG77579.1|1715192_1716050_-	P22_AR N-terminal domain	NA	A0A0M3LR56	Mannheimia_phage	37.7	4.9e-22
VEG77580.1|1716063_1716291_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77581.1|1717903_1718851_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEG77582.1|1718860_1719637_-	Nucleotidyltransferase domain	NA	NA	NA	NA	NA
VEG77583.1|1720188_1723260_-	Type-1 restriction enzyme R protein	NA	A0A220A398	Liberibacter_phage	23.3	3.9e-21
VEG77584.1|1723246_1724218_-	EcoKI restriction-modification system protein HsdS	NA	NA	NA	NA	NA
VEG77585.1|1724643_1727025_-	Probable type I restriction enzyme BthVORF4518P M protein	NA	NA	NA	NA	NA
VEG77586.1|1727036_1728770_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEG77587.1|1728736_1729393_-	Phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	42.0	4.7e-25
VEG77588.1|1729441_1730077_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEG77589.1|1730073_1730862_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77590.1|1730875_1731940_-|tRNA	tRNA (uracil(54)-C(5))-methyltransferase	tRNA	A0A2K5B251	Erysipelothrix_phage	32.3	6.1e-14
1731300:1731319	attR	AGCGGCAGGGTGAAGTTGCC	NA	NA	NA	NA
>prophage 4
LR134365	Cardiobacterium hominis strain NCTC10426 genome assembly, chromosome: 1	2670755	2111155	2122367	2670755	tRNA,coat	Bacillus_phage(16.67%)	8	NA	NA
VEG77943.1|2111155_2113321_-	Alginate biosynthesis sensor protein kinB	NA	W8CYF6	Bacillus_phage	26.2	2.7e-08
VEG77944.1|2113634_2114609_+	Transposase and inactivated derivatives, IS30 family	NA	W5R8L2	Staphylococcus_phage	41.7	2.8e-58
VEG77945.1|2114809_2116066_-	Ribosomal RNA small subunit methyltransferase B	NA	NA	NA	NA	NA
VEG77946.1|2116062_2116995_-|tRNA	Methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	39.5	6.1e-10
VEG77947.1|2116991_2117546_-	Peptide deformylase	NA	E3SLL2	Synechococcus_phage	36.3	1.8e-17
VEG77948.1|2117677_2118862_+|coat	spore coat assembly protein SafA	coat	NA	NA	NA	NA
VEG77949.1|2118861_2119971_+	DNA protecting protein DprA	NA	S6BFL3	Thermus_phage	39.3	7.5e-31
VEG77950.1|2119994_2122367_+	DNA topoisomerase 1	NA	A0A1V0SB35	Catovirus	33.5	8.9e-114
>prophage 5
LR134365	Cardiobacterium hominis strain NCTC10426 genome assembly, chromosome: 1	2670755	2174723	2186899	2670755		Burkholderia_virus(44.44%)	19	NA	NA
VEG77989.1|2174723_2175806_+	Predicted ATPase	NA	A0A077SLJ9	Escherichia_phage	24.1	2.4e-13
VEG77990.1|2175805_2176453_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77991.1|2176867_2177854_-	alkanesulfonate transporter substrate-binding subunit	NA	NA	NA	NA	NA
VEG77992.1|2177990_2178572_-	Phosphoribosylglycinamide formyltransferase	NA	A4JWM2	Burkholderia_virus	50.7	1.3e-47
VEG77993.1|2178568_2179681_-	cytochrome c biogenesis protein CcmA	NA	A4JWM1	Burkholderia_virus	67.4	3.3e-143
VEG77994.1|2179677_2179815_-	Uncharacterised protein	NA	A4JWM0	Burkholderia_virus	50.0	1.7e-06
VEG77995.1|2179789_2179975_-	Mu-like prophage protein Com	NA	NA	NA	NA	NA
VEG77996.1|2180195_2180576_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77997.1|2180572_2180971_-	Mu-like prophage protein gp16	NA	F8TVB3	EBPR_siphovirus	36.7	2.4e-11
VEG77998.1|2180973_2181147_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG77999.1|2181497_2181977_-	Uncharacterised protein	NA	A0A2H4JFV8	uncultured_Caudovirales_phage	55.3	1.3e-40
VEG78000.1|2181973_2182258_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG78001.1|2182254_2182617_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG78002.1|2182613_2182784_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG78003.1|2182780_2183293_-	Mu-like prophage host-nuclease inhibitor protein Gam	NA	L7P7T1	Pseudomonas_phage	55.7	1.4e-40
VEG78004.1|2183328_2183820_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG78005.1|2183816_2184023_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG78006.1|2184032_2185142_-	Predicted ATPase (AAA+ superfamily)	NA	A4JWN1	Burkholderia_virus	39.9	1.0e-64
VEG78007.1|2185138_2186899_-	Integrase core domain	NA	Q6QIE0	Burkholderia_phage	34.4	4.0e-79
>prophage 6
LR134365	Cardiobacterium hominis strain NCTC10426 genome assembly, chromosome: 1	2670755	2192593	2202385	2670755		Burkholderia_phage(44.44%)	14	NA	NA
VEG78018.1|2192593_2193541_-	Uncharacterised protein	NA	R9U4B8	Rhizobium_phage	40.8	1.3e-55
VEG78019.1|2193550_2193871_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG78020.1|2193874_2194945_-	Uncharacterised protein	NA	Q6QIB7	Burkholderia_phage	33.4	2.6e-36
VEG78021.1|2195094_2195547_-	Mu-like prophage protein gpG	NA	R9U1C4	Rhizobium_phage	47.4	3.5e-19
VEG78022.1|2195685_2196957_-	Phage Mu protein F like protein	NA	J9STS2	Pseudomonas_phage	63.7	1.8e-81
VEG78023.1|2196953_2198402_-	Mu-like prophage protein gp29	NA	Q5ZQY4	Pseudomonas_phage	40.6	2.7e-81
VEG78024.1|2198404_2199841_-	Mu-like prophage FluMu protein gp28	NA	Q6QIC1	Burkholderia_phage	59.6	1.2e-150
VEG78025.1|2199842_2200382_-	Protein of uncharacterised function (DUF3486)	NA	M4MCR3	Vibrio_phage	34.6	2.0e-21
VEG78026.1|2200381_2200702_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG78027.1|2200698_2201049_-	Protein of uncharacterised function (DUF2730)	NA	NA	NA	NA	NA
VEG78028.1|2201035_2201248_-	conjugal transfer protein TraR	NA	B5TA71	Burkholderia_phage	51.7	7.9e-06
VEG78029.1|2201217_2201481_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG78030.1|2201477_2201780_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEG78031.1|2201767_2202385_-	membrane-bound lytic transglycosylase F	NA	Q6QIC7	Burkholderia_phage	53.1	1.9e-47
