The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134395	Haemophilus aegyptius strain NCTC8134 genome assembly, chromosome: 1	1993241	226126	313568	1993241	plate,tRNA,protease,transposase,tail,head	Haemophilus_phage(48.98%)	95	NA	NA
VEH51991.1|226126_226831_-	phage repressor	NA	F6MII3	Haemophilus_phage	33.2	7.4e-24
VEH51992.1|227330_229313_+|transposase	phage transposase	transposase	A0A0M3LPN5	Mannheimia_phage	54.3	1.8e-184
VEH51993.1|229323_229722_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH51994.1|229773_230655_+|transposase	phage transposase	transposase	A0A0M3LP72	Mannheimia_phage	75.1	1.1e-117
VEH51995.1|230665_230962_+	sulfate transport protein cysz	NA	NA	NA	NA	NA
VEH51996.1|230970_231162_+	Uncharacterised protein	NA	F6MII8	Haemophilus_phage	57.6	9.5e-11
VEH51997.1|231162_231780_+	sulfate transport protein cysz	NA	A0A0M3LQ92	Mannheimia_phage	58.6	2.0e-65
VEH51998.1|231978_232176_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH51999.1|232184_232343_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52000.1|232339_232507_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52001.1|232512_232890_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52002.1|233003_233552_+	Uncharacterised protein	NA	A0A0M3LPP6	Mannheimia_phage	51.9	3.3e-48
VEH52003.1|233541_233940_+	Mu-like phage E16 protein	NA	F6MIJ6	Haemophilus_phage	43.7	5.3e-19
VEH52004.1|233966_234518_+	putative prophage antirepressor	NA	Q71TC0	Escherichia_phage	39.4	6.8e-17
VEH52005.1|235013_235649_+	phage anti-repressor protein	NA	A0A0P0ZG08	Escherichia_phage	41.4	7.4e-15
VEH52006.1|235659_235878_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52007.1|235983_236412_+	Mor transcription activator family	NA	F6MIJ8	Haemophilus_phage	42.3	3.3e-27
VEH52008.1|236492_237041_+	n-acetylmuramoyl-l-alanine amidase-like protein	NA	F6MIJ9	Haemophilus_phage	72.1	1.4e-78
VEH52009.1|237040_237208_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52010.1|237204_237495_+	Protein of uncharacterised function (DUF2644)	NA	F6MIK0	Haemophilus_phage	58.7	5.7e-15
VEH52011.1|237494_237752_+	Protein of uncharacterised function (DUF2681)	NA	NA	NA	NA	NA
VEH52012.1|237875_238133_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52013.1|238132_238399_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52014.1|238400_238904_+	DNA-binding protein	NA	F6MIK6	Haemophilus_phage	51.8	1.2e-44
VEH52015.1|238900_239044_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52016.1|239033_240674_+	phage protein	NA	B7SDN0	Haemophilus_phage	78.5	5.3e-251
VEH52017.1|240753_242376_+	Mu-like prophage FluMu protein gp29	NA	B7SDN1	Haemophilus_phage	68.3	2.4e-203
VEH52018.1|242359_243661_+|head	SPP1 family phage head morphogenesis protein	head	B7SDN5	Haemophilus_phage	68.8	3.5e-173
VEH52019.1|243796_244213_+|tail	phage virion morphogenesis (tail completion) protein	tail	B7SDN8	Haemophilus_phage	71.7	1.4e-51
VEH52020.1|244494_245532_+	Mu phage protein I	NA	B7SDN9	Haemophilus_phage	46.4	9.4e-68
VEH52021.1|245531_246455_+	Mu bacteriophage protein T	NA	B7SDP1	Haemophilus_phage	74.6	3.9e-134
VEH52022.1|246518_246824_+	Uncharacterised protein	NA	B7SDP3	Haemophilus_phage	50.0	2.8e-20
VEH52023.1|246833_247265_+	Mu-like prophage protein GP36	NA	B7SDP4	Haemophilus_phage	60.9	3.5e-37
VEH52024.1|247248_247911_+	Mu-like prophage protein gp37	NA	B7SDP5	Haemophilus_phage	44.7	1.2e-44
VEH52025.1|247882_248065_+	Uncharacterised protein	NA	A0A0M3LQM9	Mannheimia_phage	64.8	8.2e-12
VEH52026.1|248057_249473_+|tail	bacteriophage Mu tail sheath family protein	tail	B7SDP8	Haemophilus_phage	62.6	2.3e-157
VEH52027.1|249482_249854_+	Uncharacterised protein	NA	A0A0M3LRV6	Mannheimia_phage	66.7	3.6e-38
VEH52028.1|249853_250195_+	Uncharacterised protein	NA	A0A0M3LSI2	Mannheimia_phage	51.4	1.1e-20
VEH52029.1|250443_251211_-|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	49.8	8.8e-63
VEH52030.1|251261_251771_-	ISHin1, family IS3	NA	A0A1B1P776	Bacillus_phage	31.6	1.8e-08
VEH52031.1|251878_254158_+|tail	phage tail length determination protein	tail	A0A0M3LPB6	Mannheimia_phage	48.7	3.4e-155
VEH52032.1|254161_255499_+	putative phage virion protein	NA	F6MIL2	Haemophilus_phage	41.2	4.6e-91
VEH52033.1|255488_256613_+	bacteriophage Mu P family protein	NA	F6MIL3	Haemophilus_phage	72.4	1.6e-145
VEH52034.1|256622_257258_+|plate	phage baseplate assembly protein V	plate	A0A0M3LPA3	Mannheimia_phage	58.7	3.3e-63
VEH52035.1|257327_257678_+	phage GP46 family protein	NA	A0A0M3LQK5	Mannheimia_phage	70.7	3.9e-42
VEH52036.1|257692_258757_+|tail	Mu phage tail protein gp47	tail	F6MIL6	Haemophilus_phage	62.0	2.0e-118
VEH52037.1|258753_259350_+	Uncharacterized protein conserved in bacteria (DUF2313)	NA	F6MIL7	Haemophilus_phage	63.5	3.0e-66
VEH52038.1|259353_261381_+|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	61.1	1.0e-166
VEH52039.1|261393_262020_+	HP1	NA	Q94MX9	Haemophilus_virus	51.5	2.1e-30
VEH52040.1|262012_262501_+	Uncharacterised protein	NA	F6MIM0	Haemophilus_phage	56.2	1.9e-47
VEH52041.1|262676_262796_+	mu com-like protein	NA	NA	NA	NA	NA
VEH52042.1|262857_263703_+	D12 class N6 adenine-specific DNA methyltransferase	NA	F6MIM2	Haemophilus_phage	71.4	3.1e-117
VEH52043.1|263741_264005_-	Uncharacterised protein	NA	F6MIM3	Haemophilus_phage	79.1	1.4e-33
VEH52044.1|264367_264853_-	lipooligosaccharide biosynthesis protein	NA	NA	NA	NA	NA
VEH52045.1|264879_265527_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2I2L4Y7	Orpheovirus	45.7	1.8e-40
VEH52046.1|267007_267688_+	diadenosine tetraphosphatase and related serine/threonine protein phosphatase	NA	NA	NA	NA	NA
VEH52047.1|268296_269370_-	membrane-bound lytic murein transglycosylase C	NA	NA	NA	NA	NA
VEH52048.1|269384_269657_-	protein that protects iron-sulfur proteins against oxidative damage	NA	NA	NA	NA	NA
VEH52049.1|269634_270771_-	adenine DNA glycosylase	NA	NA	NA	NA	NA
VEH52050.1|270947_271160_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
VEH52051.1|271234_271918_-	phosphoglyceromutase	NA	NA	NA	NA	NA
VEH52052.1|272093_273326_+|protease	protease with a role in cell division	protease	V5R8R0	Arthrobacter_phage	35.4	7.1e-06
VEH52053.1|273325_274168_+	polysaccharide deacetylase	NA	NA	NA	NA	NA
VEH52054.1|274228_274972_-	UDP-glucose--lipooligosaccharide glucosyltransferase	NA	A0A1D8KPY1	Synechococcus_phage	27.0	4.1e-09
VEH52055.1|274985_275339_-	Lipooligosachharide biosynthesis protein Lex2A	NA	NA	NA	NA	NA
VEH52056.1|275534_275651_-	phosphoribosylformylglycinamidine synthase	NA	NA	NA	NA	NA
VEH52057.1|275647_277936_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	49.7	1.9e-84
VEH52058.1|277968_279363_-	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	32.7	4.0e-05
VEH52059.1|279996_280494_+	lipid hydroperoxide peroxidase	NA	NA	NA	NA	NA
VEH52060.1|280712_281537_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
VEH52061.1|281679_282303_-	LexA repressor	NA	A5LH73	Enterobacteria_phage	41.1	2.2e-11
VEH52062.1|282557_284990_+	glycerol-3-phosphate O-acyltransferase	NA	NA	NA	NA	NA
VEH52063.1|285068_286403_-	respiratory NADH dehydrogenase 2/cupric reductase	NA	NA	NA	NA	NA
VEH52064.1|286606_287929_-	anaerobic C4-dicarboxylate transporter DcuB	NA	NA	NA	NA	NA
VEH52065.1|288175_288622_+	rhodanese-related sulfurtransferase	NA	NA	NA	NA	NA
VEH52066.1|288635_289145_+	protein export chaperone	NA	NA	NA	NA	NA
VEH52067.1|289211_289541_-	DNA polymerase III subunit alpha	NA	NA	NA	NA	NA
VEH52068.1|289689_291342_-	Phosphoglucomutase PgmB	NA	A0A1X9I671	Streptococcus_phage	34.8	5.9e-80
VEH52069.1|291580_295060_+	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	36.8	1.6e-191
VEH52070.1|295098_296640_-	threonine deaminase	NA	NA	NA	NA	NA
VEH52071.1|296718_298557_-	Dihydroxyacid dehydratase	NA	NA	NA	NA	NA
VEH52072.1|298598_299267_-	acetolactate synthase isozyme II large subunit	NA	NA	NA	NA	NA
VEH52073.1|299512_301039_+	sodium-dependent transporter	NA	NA	NA	NA	NA
VEH52074.1|301040_301136_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52075.1|301268_301982_-	UDP-2,3-diacylglucosamine pyrophosphatase	NA	NA	NA	NA	NA
VEH52076.1|302067_302790_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
VEH52077.1|302791_304201_+	repressor protein for FtsI	NA	NA	NA	NA	NA
VEH52078.1|304320_306669_+	exported protein required for envelope biosynthesis and integrity	NA	NA	NA	NA	NA
VEH52079.1|306756_308475_-|tRNA	prolyl-tRNA synthetase	tRNA	NA	NA	NA	NA
VEH52080.1|308559_310419_-	ATP-dependent DNA helicase	NA	A0A1V0SBK0	Catovirus	37.1	1.9e-87
VEH52081.1|310420_310726_-	frataxin, iron-binding and oxidizing protein	NA	NA	NA	NA	NA
VEH52082.1|310822_310939_+	Predicted small periplasmic lipoprotein	NA	NA	NA	NA	NA
VEH52083.1|310986_312234_+	diaminopimelate decarboxylase	NA	NA	NA	NA	NA
VEH52084.1|312439_313066_+	DNA-binding response regulator in two-component regulatory system with NarQ or NarX	NA	NA	NA	NA	NA
VEH52085.1|313127_313568_-|protease	ATP-dependent Lon protease	protease	NA	NA	NA	NA
>prophage 2
LR134395	Haemophilus aegyptius strain NCTC8134 genome assembly, chromosome: 1	1993241	325716	383173	1993241	plate,tRNA,lysis,terminase,capsid,holin,tail,head,portal,integrase	Mannheimia_phage(51.35%)	70	314979:315038	383547:386937
314979:315038	attL	AACCTGGCGGTGCCCTACTCTCACATGGGGAAACCCCACACTACCATCGGCATTACAGCG	NA	NA	NA	NA
VEH52095.1|325716_326376_-|tRNA	pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32)	tRNA	NA	NA	NA	NA
VEH52096.1|326378_329150_-	RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor)	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	38.4	1.5e-19
VEH52097.1|329335_330085_+	DNA-binding transcriptional activator	NA	A0A077SK06	Escherichia_phage	29.5	2.4e-17
VEH52098.1|330314_332084_+	L-fucose isomerase	NA	NA	NA	NA	NA
VEH52099.1|332156_333569_+	L-fuculokinase	NA	NA	NA	NA	NA
VEH52100.1|333582_334017_+	L-fucose mutarotase	NA	NA	NA	NA	NA
VEH52101.1|334036_334687_+	L-fuculose phosphate aldolase	NA	NA	NA	NA	NA
VEH52102.1|334725_336012_+	L-fucose transporter	NA	NA	NA	NA	NA
VEH52103.1|336539_337388_+	bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	39.3	6.1e-33
VEH52104.1|337525_338911_-	di-and tricarboxylate transporter	NA	NA	NA	NA	NA
VEH52105.1|339049_339865_-	shikimate 5-dehydrogenase-like protein	NA	NA	NA	NA	NA
VEH52106.1|339874_340678_-	serine acetyltransferase	NA	NA	NA	NA	NA
VEH52107.1|340694_341702_-	glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
VEH52108.1|341775_344307_-	adenylate cyclase	NA	NA	NA	NA	NA
VEH52109.1|344611_345823_+	heme biosynthesis-like protein	NA	NA	NA	NA	NA
VEH52110.1|345833_347120_+	protoheme IX synthesis protein	NA	NA	NA	NA	NA
VEH52111.1|347176_347392_-	phosphate starvation inducible protein	NA	NA	NA	NA	NA
VEH52112.1|348394_349405_-|portal	portal vertex protein	portal	Q19UT6	Mannheimia_phage	61.8	4.6e-120
VEH52113.1|349414_350014_-	Terminase, ATPase subunit	NA	E5E3S6	Burkholderia_phage	50.8	3.2e-52
VEH52114.1|350023_351190_-	Terminase, ATPase subunit	NA	A0A0M3LRV4	Mannheimia_phage	72.5	2.4e-157
VEH52115.1|351256_351349_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52116.1|351617_352262_+	prophage antirepressor	NA	D0UIM5	Aggregatibacter_phage	35.0	5.3e-29
VEH52117.1|352439_353255_+|capsid	capsid scaffolding protein	capsid	A0A0M3LNM2	Mannheimia_phage	60.7	1.2e-62
VEH52118.1|353276_354326_+|capsid	major capsid protein	capsid	Q19UT3	Mannheimia_phage	51.6	4.4e-89
VEH52119.1|354337_354988_+|terminase	terminase, endonuclease subunit	terminase	Q19US0	Mannheimia_phage	45.5	4.1e-45
VEH52120.1|355280_355787_+|head	putative phage head completion	head	A0A0M3LNL8	Mannheimia_phage	51.0	1.3e-33
VEH52121.1|355786_355996_+|tail	Probable bacteriophage tail protein X	tail	E5G6M9	Salmonella_phage	40.6	4.5e-06
VEH52122.1|355997_356219_+|holin	holin	holin	NA	NA	NA	NA
VEH52123.1|356211_356730_+	phage-like lysozyme	NA	A0A0M3LPQ1	Mannheimia_phage	46.6	9.5e-37
VEH52124.1|356714_357065_+|lysis	phage lysis regulatory protein, LysB family	lysis	NA	NA	NA	NA
VEH52125.1|357239_357455_+	DnaK suppressor protein	NA	A0A0M3LS11	Mannheimia_phage	46.6	5.3e-10
VEH52126.1|357451_357922_+|tail	Probable bacteriophage tail completion protein	tail	E5G6N3	Salmonella_phage	46.0	5.6e-28
VEH52127.1|357921_358380_+|tail	Probable bacteriophage tail completion protein	tail	A0A2H4J927	uncultured_Caudovirales_phage	50.4	1.3e-26
VEH52128.1|358357_358630_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52129.1|358699_361435_+|tail	phage-related tail protein	tail	A0A0A7NRZ9	Enterobacteria_phage	36.1	1.8e-86
VEH52130.1|361511_361679_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52131.1|361656_362109_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52132.1|362215_362809_+|plate	phage P2-like baseplate assembly protein	plate	A0A0M3LPY9	Mannheimia_phage	66.5	2.7e-43
VEH52133.1|362810_363149_+|plate	baseplate assembly protein W	plate	Q19UQ6	Mannheimia_phage	56.6	3.4e-19
VEH52134.1|363145_364060_+|plate	phage-like baseplate assembly protein	plate	Q19UQ5	Mannheimia_phage	59.2	1.5e-93
VEH52135.1|364046_364586_+|tail	Probable bacteriophage tail protein gpI	tail	Q19UQ4	Mannheimia_phage	53.5	6.0e-50
VEH52136.1|364594_366841_+|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	59.4	3.6e-189
VEH52137.1|366852_367455_+	Uncharacterised protein	NA	Q94MX9	Haemophilus_virus	91.0	2.6e-94
VEH52138.1|367451_367952_+	Uncharacterised protein	NA	F6MIM0	Haemophilus_phage	62.3	1.7e-51
VEH52139.1|368127_368247_+	mu com-like protein	NA	NA	NA	NA	NA
VEH52140.1|368303_369149_+	D12 class N6 adenine-specific DNA methyltransferase	NA	F6MIM2	Haemophilus_phage	72.8	2.3e-120
VEH52141.1|369593_370778_+|tail	phage tail sheath-like protein	tail	A0A1S6KZY7	Salmonella_phage	48.7	6.0e-103
VEH52142.1|370781_371288_+|tail	phage-related tail protein	tail	Q19UP8	Mannheimia_phage	59.5	7.1e-53
VEH52143.1|371356_371656_+|tail	Probable bacteriophage tail protein E	tail	A0A0F7LBN9	Escherichia_phage	40.7	4.4e-10
VEH52144.1|371655_371802_+	phage p2 gpe	NA	E5E3Q0	Burkholderia_phage	65.0	2.2e-07
VEH52145.1|371969_372131_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52146.1|372130_372568_+|tail	phage-related tail protein	tail	A0A0M3LQ18	Mannheimia_phage	56.7	1.0e-39
VEH52147.1|372567_373767_+	regulator of late gene expression	NA	R9QBT3	Mannheimia_phage	51.7	1.1e-101
VEH52148.1|373792_374032_-	Excalibur calcium-binding domain	NA	NA	NA	NA	NA
VEH52149.1|374042_375212_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52150.1|375221_375911_-	phage repressor	NA	A0A0M3LPF9	Mannheimia_phage	34.9	1.0e-30
VEH52151.1|376029_376278_+	Uncharacterized protein conserved in bacteria, prophage-related	NA	Q19UN8	Mannheimia_phage	49.1	1.4e-06
VEH52152.1|376274_376517_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52153.1|376739_376982_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52154.1|377046_377289_+	Uncharacterised protein	NA	Q19UN6	Mannheimia_phage	68.1	1.2e-21
VEH52155.1|377379_377640_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52156.1|377657_378038_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52157.1|378041_378284_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52158.1|378280_378394_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52159.1|378409_378718_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52160.1|378727_380914_+	Probable bacteriophage replication protein A	NA	Q94N00	Haemophilus_virus	42.4	3.5e-165
VEH52161.1|380932_381124_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52162.1|381134_381344_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52163.1|381357_381879_+	Uncharacterised protein	NA	A0A0M3LTD8	Mannheimia_phage	42.4	7.3e-29
VEH52164.1|382117_383173_+|integrase	Prophage integrase	integrase	K7PKD7	Enterobacteria_phage	36.2	1.3e-56
383547:386937	attR	AACCTGGCGGTGCCCTACTCTCACATGGGGAAACCCCACACTACCATCGGCATTACAGCGTTTCACTTCTGAGTTCGGTATGGTCTCAGGTGGGTCCACCGCACTATCGCCGCCAGGATAATTCTTTGATAACTCGTCTTCTCTTTTATCTCTCGTCTCTTTTATCTCTCGTTACTCAGTCTTTACTCTACCTTTCACTCGTTCTTATTGGTCACAAGCTGAACTCAATTTCCTTTCTATTAAGTCTTCTATATTTACTTTTCTTTGTTTAGTCTTTTACTTCGGTTTCCGCTCTACTTTTATTTGCTTCGCTTTTCATCTCTTACTTCACTTAGCTCCCAAAAACACTTGAGCGTTGTATAGTTAAGCCTCTCGGGCAATTAGTATCTGTTAGCTCAATGTATCACTACACTTACACACCTGACCTATCTACGTCGTAGTCTACAACAACCCTTACTATCTCTTAGATTGGGAGAACTCATCTCTTGGCAAGTTTCGTGCTTAGATGCTTTCAGCACTTATCTCTTCCGCACTTAGCTACCCGGCAATGCGTCTGGCGACACAACCGGAACACCAGTGGTGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCAACCAATTCTCCTACGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTACTTTCGTACCTGCTCGACTTGTCTGTCTCGCAGTTAAGCTTGCTTATACCATTGCACTAACCTCACGATGTCCGACCGTGATTAGCAAACCTTCGTGCTCCTCCGTTACGCTTTGGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGAGACCACGTTCCGCAATCTTCGTTAGAACATCAAACGTTAAAGGGTGGTATTTCAAGGTCGACTCCAACAATACTGGCGTATCATCTTCTTAGTCTCCCACCTATCCTACACATCAAAATTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTAGCCGCGGGTACACCGCATCTTCACGGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCCATCATTATGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAGGTGCTTCTCTTGCGATGACACCATCAATTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACCTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTCACTTCGACCGGTTCAACCTTCAGGGGCTAGCCCTTACAATCTACGCCGGCGCACCTTCTCCCGAAGTTACGGTGCTATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTGAGTATTCTCTACCTGACCACCTGTGTCGGTTTTCAGTACGGTTTAGTAAAGCCTTTCGCTTAGTGGCTTTTCCTGGAAGTGTGGTATCAGTTACTTCAGCTCCGTAGAGCCTCGTCATCATCTCTCTGTGTTAAGGAAGTCCGGATTTGCCTAAACTTCCCACCTACCAACTTAAACGCACATATCCAACAGTGCGATAACCTAACCTACTCCGTCCCCACATCGCAGCTTTACCAAGTACAGGAATATTAACCTGTTTCCCATCGACTACGCTTTTCAGCCTCGCCTTAGGAGCCGACTTACCCTGCCCCGATTAACGTTGGACAGGAACCCTTGGTCTTCCGGCGAACGGGTTTTTCACCCGTTTTATCGTTACTTATGTCAGCATTCGCACTTGTGATACGTCCAGCCCACCTCTCGATGAACCTTCATCCGCTTACACAACGCTCCCCTACCCAACAGGCGTATTAGTGATACGCCTGATGCCGCAGCTTCGGTGCTATATTTCAGCCCCGTTACATCTTCCGCGCAGACCGACTCGACTAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGCTGTCTAAGCCTTCCCACTTCGTTTCCCACTTAATATAGACTTGGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCTCCACGACGGACGTTAGCACCCGCCGTGTGTCTCCTGAGTATCACTCTTTGGTATTCGTAGTTTGCATCGGGTTGGTAATCCGGGATGGACCCCTAGCCGAAACAGTGCTCTACCCCCAAAGGTGTCACCTCAAGGCTCTACCTAAATAGATTTCGGGGAGAACCAGCTATCTCCCGGTTTGATTGGCCTTTCACCCCCAGCCACAAGTCATCCGCTAATTTTTCAACATTAGTCGGTTCGGTCCTCCAGTTAGTGTTACCCAACCTTCAACCTGCCCATGGCTAGATCACCGGGTTTCGGGTCTATACCCTGCAACTCAACGCCCAGTTAAGACTCGGTTTCCCTTCGGCTCCCCTATTCGGTTAACCTCGCTACAAAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCCATCACTTAATCCCACTGCTTCTTTTGGGTGGTTTGACTCGCTTCGCTCCTCTTACCATTGTTTAAGTGCGGTTGCTTTTCATCACCTTCCAATCGGATTAAGTGATGGGGCTCCCACTGCTTGTACGTACAAGGTTTCAGGTTCTATTTCACTCCCCTCACCGGGGTTCTTTTCGCCTTTCCTTCACAGTACTGGTTCACTATCGGTCAATCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCTTCTTCAAACAGGATATCACGTGTCCCGCCCTACTTCTCGTTAGCTTAGTACCACAATATGGTTTTTAGATACGGGATTATCACCCTCTTTGATTGTGCTTCCCAACACATTCTCCTAACTATATTGCTATCACTTACTGGCTCTTTCGCTTTCGCTCGCCGCTACTGACGAAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCTCCCGGTTTGCCTCAACAAGCTATGAATTCACTTGTTGATAGTAGATTCTTCATCTACTGGGTTTCCCCATTCGGATATCTTGGATTAAACGCCTCTTATCGACTCATCCAAGCTTTTCGCAGATTAGCACGTCCTTCTTCGCCTCTGATTGCCAAGGCATCCACCTTGTACGCTTAGTCACTTAACTATACAACCTCAAATGTTTTCAA	NA	NA	NA	NA
>prophage 3
LR134395	Haemophilus aegyptius strain NCTC8134 genome assembly, chromosome: 1	1993241	717965	802903	1993241	plate,tRNA,holin,terminase,transposase,tail,integrase	Mannheimia_phage(17.74%)	114	717813:717861	769329:769377
717813:717861	attL	CGGACTCTTAATCCGTCGGTCGAGAGTTCGAGCCTCTCACAACCTACCA	NA	NA	NA	NA
VEH52483.1|717965_718991_-|integrase	prophage integrase	integrase	K7PKD7	Enterobacteria_phage	35.4	7.4e-57
VEH52484.1|719255_719678_-	Uncharacterised protein	NA	A0A249XZT5	Enterococcus_phage	53.7	4.0e-17
VEH52485.1|719724_720150_-	Uncharacterised protein	NA	A0A2I7QK91	Vibrio_phage	38.5	5.3e-17
VEH52486.1|720288_720726_-	Uncharacterised protein	NA	A0A2K9V3W6	Faecalibacterium_phage	37.0	7.8e-24
VEH52487.1|720729_721212_-	Uncharacterised protein	NA	A0A0M3LS47	Mannheimia_phage	42.0	1.1e-23
VEH52488.1|721269_722433_-	modification methylase Bsp6I-like	NA	A0A2I7RFJ9	Vibrio_phage	46.4	1.3e-89
VEH52489.1|722440_722800_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52490.1|722796_723042_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52491.1|723038_723935_-	recombination associated protein	NA	S4TWL4	Salmonella_phage	44.0	3.8e-57
VEH52492.1|724060_724867_-	Uncharacterised protein	NA	A0A0U3TGV3	Pseudomonas_phage	69.6	2.3e-37
VEH52493.1|724930_725365_-	ssDNA-binding protein	NA	L7TJL2	Pseudomonas_virus	35.1	5.7e-19
VEH52494.1|725364_726015_-	Uncharacterised protein	NA	A0A0M3LP90	Mannheimia_phage	71.1	2.6e-84
VEH52495.1|725989_726910_-	recombinational DNA repair protein, rece pathway	NA	A0A0M3LNU3	Mannheimia_phage	71.9	2.2e-116
VEH52496.1|726922_727216_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52497.1|727212_727560_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52498.1|727573_728311_-	modification methylase DpnIIB-like	NA	A0A0E3U2R2	Fusobacterium_phage	77.5	6.8e-113
VEH52499.1|728401_729433_-	phage antirepressor protein	NA	D0UIK6	Aggregatibacter_phage	79.8	4.1e-39
VEH52500.1|729422_729674_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52501.1|729816_730104_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52502.1|730489_730675_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52503.1|730834_731983_-	Uncharacterized conserved protein	NA	A0A1S5SAB0	Streptococcus_phage	36.2	1.7e-30
VEH52504.1|731993_732794_-|tRNA	tRNA_anti-like	tRNA	NA	NA	NA	NA
VEH52505.1|732916_733282_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
VEH52506.1|733283_733871_-	ning recombination protein	NA	A0A2I7RAC0	Vibrio_phage	49.0	1.3e-37
VEH52507.1|733870_733963_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52508.1|733959_734379_-	recombination protein NinB	NA	Q7Y5V7	Haemophilus_phage	75.4	3.3e-56
VEH52509.1|734415_734640_-	Uncharacterised protein	NA	A0A0M3LR43	Mannheimia_phage	47.9	1.1e-10
VEH52510.1|734636_735278_-	phage replication protein	NA	NA	NA	NA	NA
VEH52511.1|735262_736030_-	Uncharacterised protein	NA	D0UIL5	Aggregatibacter_phage	44.7	1.8e-39
VEH52512.1|736046_736280_-	Uncharacterised protein	NA	A0A0M3LR73	Mannheimia_phage	58.9	1.9e-13
VEH52513.1|736325_736778_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52514.1|737161_738130_+	phage repressor	NA	A0A0M3LPF9	Mannheimia_phage	30.5	7.0e-17
VEH52515.1|738201_738711_+	ISHin1, family IS3	NA	A0A1B1P776	Bacillus_phage	31.6	1.8e-08
VEH52516.1|738761_739529_+|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	49.8	8.8e-63
VEH52517.1|739774_740287_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52518.1|740465_740825_+|holin	Putative bacteriophage holin protein	holin	NA	NA	NA	NA
VEH52519.1|740790_741393_+	Putative phage lysozyme	NA	Q7Y5V0	Haemophilus_phage	55.4	3.9e-58
VEH52520.1|741385_741709_+	putative bacteriophage protein	NA	Q7Y5U9	Haemophilus_phage	56.1	9.2e-22
VEH52521.1|741903_742251_-	transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	57.0	5.2e-23
VEH52522.1|742234_742486_-	bacteriophage protein/plasmid stabilization system protein	NA	A0A1S5NR91	Burkholderia_phage	52.9	9.9e-16
VEH52523.1|742563_743082_+|terminase	Probable bacteriophage terminase, small subunit	terminase	A0A1X9SFE5	Acinetobacter_phage	39.2	2.1e-20
VEH52524.1|743026_744421_+|terminase	phage terminase large subunit	terminase	A0A220NQL3	Acinetobacter_phage	52.9	5.2e-122
VEH52525.1|744422_745739_+	phage-associated protein, HI1409 family	NA	A0A2K9V3H1	Faecalibacterium_phage	32.0	1.8e-47
VEH52526.1|745677_746937_+	phage Mu protein gp30-like protein	NA	E5AGA5	Erwinia_phage	31.2	1.8e-25
VEH52527.1|747062_748136_+	Uncharacterized protein conserved in bacteria	NA	E5AGA6	Erwinia_phage	40.2	9.4e-55
VEH52528.1|748146_748566_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52529.1|748627_749575_+	Uncharacterized protein conserved in bacteria	NA	A0A0N9SG07	Pseudomonas_phage	36.6	2.8e-50
VEH52530.1|749577_749766_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52531.1|749769_750120_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52532.1|750112_750571_+	Mu-like prophage protein gpG	NA	A0A2I7R754	Vibrio_phage	34.5	5.3e-15
VEH52533.1|750570_750930_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52534.1|750931_751441_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52535.1|751421_752501_+	phage-like protein	NA	A0A0N9SJA3	Pseudomonas_phage	46.7	8.3e-59
VEH52536.1|752546_752972_+	Uncharacterised protein	NA	A0A0A1IUI2	Pseudomonas_phage	36.9	2.6e-16
VEH52537.1|752971_753454_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52538.1|753489_753642_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52539.1|753638_755969_+|tail	phage-like minor tail protein	tail	H9EB42	Vibrio_phage	26.8	6.4e-32
VEH52540.1|756043_756616_-	putative prophage antirepressor	NA	I6R977	Salmonella_phage	52.3	3.3e-14
VEH52541.1|756923_757505_+	Uncharacterised protein	NA	I3PGV3	Xanthomonas_phage	27.7	5.7e-06
VEH52542.1|757501_757816_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH52543.1|757812_758775_+	Uncharacterised protein	NA	M4SNA5	Psychrobacter_phage	29.2	1.0e-20
VEH52544.1|758771_759443_+|plate	phage baseplate assembly protein V	plate	A0A0M5M1K7	Salmonella_phage	33.0	3.4e-18
VEH52545.1|759439_759805_+	Uncharacterised protein	NA	A0A1J0MEY0	Pectobacterium_phage	35.4	1.8e-10
VEH52546.1|759797_761234_+	Uncharacterized homolog of phage Mu protein gp47	NA	A0A0N9SH53	Pseudomonas_phage	28.4	4.8e-46
VEH52547.1|761242_761869_+	Protein of uncharacterised function (DUF2612)	NA	A0A0N9SSD8	Pseudomonas_phage	36.9	4.0e-21
VEH52548.1|761865_764151_+|tail	phage tail fiber protein	tail	Q94MY0	Haemophilus_virus	48.3	1.6e-136
VEH52549.1|764150_764774_+	HP1	NA	D0UIH2	Aggregatibacter_phage	45.3	1.2e-17
VEH52550.1|764766_765246_+	Uncharacterised protein	NA	F6MIM0	Haemophilus_phage	55.6	1.8e-45
VEH52551.1|765695_766013_+|integrase	integrase	integrase	A0A0M3LRG1	Mannheimia_phage	55.2	1.1e-24
VEH52552.1|766289_766460_+|integrase	integrase/recombinase	integrase	A0A0M3LQN1	Mannheimia_phage	63.0	1.0e-11
VEH52553.1|766469_766694_+|integrase	integrase	integrase	Q19US1	Mannheimia_phage	66.2	5.4e-21
VEH52554.1|766753_766912_-	Uncharacterised protein	NA	A0A0M3LTD8	Mannheimia_phage	81.4	3.4e-14
VEH52555.1|766966_767437_-	Probable bacteriophage replication protein A	NA	Q94N00	Haemophilus_virus	39.0	6.6e-21
VEH52556.1|767448_767670_+	mu-like prophage protein gp29	NA	B7SDN1	Haemophilus_phage	69.4	1.5e-20
VEH52557.1|767681_768398_+	Uncharacterised protein	NA	A0A0M3LSH7	Mannheimia_phage	58.2	8.2e-71
VEH52558.1|768540_768957_+|tail	phage virion morphogenesis (tail completion) protein	tail	B7SDN8	Haemophilus_phage	71.5	4.2e-51
VEH52559.1|769487_770213_+	putative methyltransferase	NA	NA	NA	NA	NA
769329:769377	attR	CGGACTCTTAATCCGTCGGTCGAGAGTTCGAGCCTCTCACAACCTACCA	NA	NA	NA	NA
VEH52560.1|770265_770718_+	DNA-binding transcriptional repressor	NA	NA	NA	NA	NA
VEH52561.1|770785_772000_+	cysteine desulfurase	NA	H7BUW1	unidentified_phage	35.5	1.5e-32
VEH52562.1|772059_772440_+	iron-sulfur cofactor synthesis protein NifU	NA	A0A218MKD1	uncultured_virus	80.6	1.4e-53
VEH52563.1|772497_772821_+	FeS cluster assembly protein	NA	A0A2H4N7N5	Lake_Baikal_phage	46.7	4.4e-24
VEH52564.1|772833_773358_+	DnaJ-like molecular chaperone specific for IscU	NA	NA	NA	NA	NA
VEH52565.1|773408_774095_+	Protein of uncharacterised function DUF2625	NA	NA	NA	NA	NA
VEH52566.1|774113_775973_+	DnaK-like molecular chaperone	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.6	4.2e-111
VEH52567.1|776014_776356_+	[2Fe-2S] ferredoxin	NA	NA	NA	NA	NA
VEH52568.1|776355_776550_+	IscX	NA	NA	NA	NA	NA
VEH52569.1|776600_777215_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEH52570.1|777232_778504_-|tRNA	histidyl tRNA synthetase	tRNA	NA	NA	NA	NA
VEH52571.1|778513_779620_-	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase	NA	NA	NA	NA	NA
VEH52572.1|779628_780540_-	transcriptional regulator with an N-terminal xre-type HTH domain	NA	NA	NA	NA	NA
VEH52573.1|780611_781151_-	Transformation and Tfp-related protein PilF	NA	NA	NA	NA	NA
VEH52574.1|781251_782403_-	ribosomal RNA large subunit methyltransferase N	NA	NA	NA	NA	NA
VEH52575.1|782649_783528_+	penicillin-binding protein	NA	NA	NA	NA	NA
VEH52576.1|783892_784774_+	putative periplasmic chelated iron binding protein	NA	NA	NA	NA	NA
VEH52577.1|784773_785694_+	putative ABC-type chelated iron transport system, ATPase component	NA	G9BWD6	Planktothrix_phage	27.3	2.2e-12
VEH52578.1|785697_786546_+	putative ABC-type chelated iron transport system, permease component	NA	NA	NA	NA	NA
VEH52579.1|786538_787354_+	putative ABC-type chelated iron transport system, permease component	NA	NA	NA	NA	NA
VEH52580.1|787447_788095_-	putative transcription activator	NA	NA	NA	NA	NA
VEH52581.1|788105_789050_-	putative ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	NA	NA	NA	NA	NA
VEH52582.1|789071_789809_-	taurine transporter subunit	NA	NA	NA	NA	NA
VEH52583.1|789805_790528_-	putative ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component	NA	G3M9Y6	Bacillus_virus	34.5	1.9e-27
VEH52584.1|790926_791883_+	CMP-neu5Ac--lipooligosaccharide alpha 2-3 sialyltransferase	NA	NA	NA	NA	NA
VEH52585.1|792055_793072_+	UDP-galactose-4-epimerase	NA	A0A2K9L1R4	Tupanvirus	48.9	2.5e-89
VEH52586.1|793213_794491_+	integral membrane signal transducer protein	NA	NA	NA	NA	NA
VEH52587.1|794575_795220_+	adenylate kinase	NA	A0A1B4XWI3	Tenacibaculum_phage	28.1	1.0e-11
VEH52588.1|795379_795982_-	nitrate reductase, cytochrome c-type, periplasmic	NA	NA	NA	NA	NA
VEH52589.1|795996_796440_-	diheme cytochrome C NapB	NA	NA	NA	NA	NA
VEH52590.1|796445_797309_-	ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase(NapAB)	NA	NA	NA	NA	NA
VEH52591.1|797308_798142_-	ferredoxin-type protein NapG	NA	NA	NA	NA	NA
VEH52592.1|798203_800687_-	nitrate reductase catalytic subunit	NA	NA	NA	NA	NA
VEH52593.1|800723_801005_-	assembly protein for periplasmic nitrate reductase	NA	NA	NA	NA	NA
VEH52594.1|800997_801528_-	ferredoxin-type protein NapF	NA	NA	NA	NA	NA
VEH52595.1|801733_802078_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEH52596.1|802162_802903_-|tRNA	tRNA (m7G46) methyltransferase, SAM-dependent	tRNA	NA	NA	NA	NA
>prophage 4
LR134395	Haemophilus aegyptius strain NCTC8134 genome assembly, chromosome: 1	1993241	1076400	1095631	1993241	transposase,tail,head	Haemophilus_phage(78.95%)	32	NA	NA
VEH52998.1|1076400_1078377_+|transposase	phage transposase	transposase	A0A0M3LPN5	Mannheimia_phage	53.0	3.4e-191
VEH53000.1|1078387_1078786_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53002.1|1078837_1079719_+|transposase	phage transposase	transposase	A0A0M3LP72	Mannheimia_phage	60.1	1.9e-90
VEH53004.1|1079730_1080027_+	sulfate transport protein cysz	NA	NA	NA	NA	NA
VEH53006.1|1080035_1080227_+	Uncharacterised protein	NA	F6MII8	Haemophilus_phage	57.6	9.5e-11
VEH53008.1|1080227_1080845_+	sulfate transport protein cysz	NA	A0A0M3LQ92	Mannheimia_phage	58.8	6.8e-66
VEH53010.1|1081031_1081229_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53012.1|1081239_1081404_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53014.1|1081400_1081574_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53016.1|1081578_1081827_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53018.1|1082067_1082466_+	Mu-like phage E16 protein	NA	F6MIJ6	Haemophilus_phage	42.9	3.4e-18
VEH53020.1|1082492_1082696_+	KilA-N domain	NA	NA	NA	NA	NA
VEH53022.1|1083168_1083810_+	phage anti-repressor protein	NA	A0A059T6E7	Listeria_phage	43.2	2.5e-10
VEH53024.1|1083820_1084039_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53026.1|1084144_1084573_+	Mor transcription activator family	NA	F6MIJ8	Haemophilus_phage	42.3	3.3e-27
VEH53028.1|1084653_1085202_+	n-acetylmuramoyl-l-alanine amidase-like protein	NA	F6MIJ9	Haemophilus_phage	72.1	1.4e-78
VEH53030.1|1085201_1085369_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53032.1|1085365_1085656_+	Protein of uncharacterised function (DUF2644)	NA	F6MIK0	Haemophilus_phage	58.7	5.7e-15
VEH53034.1|1085655_1085913_+	Protein of uncharacterised function (DUF2681)	NA	NA	NA	NA	NA
VEH53036.1|1086036_1086294_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53038.1|1086293_1086560_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53040.1|1086561_1087065_+	DNA-binding protein	NA	F6MIK6	Haemophilus_phage	51.8	1.2e-44
VEH53042.1|1087061_1087205_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53044.1|1087194_1088835_+	phage protein	NA	B7SDN0	Haemophilus_phage	78.5	5.3e-251
VEH53046.1|1088914_1090537_+	Mu-like prophage FluMu protein gp29	NA	B7SDN1	Haemophilus_phage	68.3	2.4e-203
VEH53048.1|1090520_1091822_+|head	SPP1 family phage head morphogenesis protein	head	B7SDN5	Haemophilus_phage	68.8	3.5e-173
VEH53050.1|1091957_1092374_+|tail	phage virion morphogenesis (tail completion) protein	tail	B7SDN8	Haemophilus_phage	71.7	1.4e-51
VEH53052.1|1092655_1093693_+	Mu phage protein I	NA	B7SDN9	Haemophilus_phage	46.4	9.4e-68
VEH53054.1|1093692_1094616_+	Mu bacteriophage protein T	NA	B7SDP1	Haemophilus_phage	74.6	3.9e-134
VEH53056.1|1094679_1094985_+	Uncharacterised protein	NA	B7SDP3	Haemophilus_phage	50.0	2.8e-20
VEH53058.1|1094994_1095426_+	Mu-like prophage protein GP36	NA	B7SDP4	Haemophilus_phage	60.9	3.5e-37
VEH53060.1|1095409_1095631_+	Mu-like prophage protein gp37	NA	B7SDP5	Haemophilus_phage	47.9	2.9e-11
>prophage 5
LR134395	Haemophilus aegyptius strain NCTC8134 genome assembly, chromosome: 1	1993241	1199769	1207184	1993241	transposase	uncultured_virus(14.29%)	8	NA	NA
VEH53226.1|1199769_1200066_+	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	38.6	2.0e-07
VEH53228.1|1200068_1200311_+	hypoxanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
VEH53230.1|1200368_1200632_-|transposase	ISSoc3 transposase	transposase	A0A1S5RHE3	Helicobacter_phage	67.8	2.4e-28
VEH53232.1|1200677_1201814_+|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	57.0	4.0e-120
VEH53233.1|1201950_1202418_-	anaerobic ribonucleotide reductase activating protein	NA	A0A2H5BH04	Vibrio_virus	58.4	8.0e-51
VEH53234.1|1202665_1204396_-	fused cysteine transporter subunits of ABC superfamily: membrane component/ATP-binding component	NA	W8CYL7	Bacillus_phage	24.3	3.2e-20
VEH53235.1|1204395_1206156_-	fused cysteine transporter subunits of ABC superfamily: membrane component/ATP-binding component	NA	F2Y2R6	Organic_Lake_phycodnavirus	31.4	1.3e-16
VEH53236.1|1206227_1207184_-	thioredoxin reductase, FAD/NAD(P)-binding	NA	A0A1V0SIN1	Klosneuvirus	40.6	2.1e-58
>prophage 6
LR134395	Haemophilus aegyptius strain NCTC8134 genome assembly, chromosome: 1	1993241	1231117	1239631	1993241		Bacillus_virus(33.33%)	8	NA	NA
VEH53283.1|1231117_1232101_-	dipeptide transporter	NA	G3M9Y6	Bacillus_virus	27.3	3.2e-17
VEH53285.1|1232103_1233096_-	dipeptide transporter	NA	G3M9Y6	Bacillus_virus	31.7	4.0e-15
VEH53287.1|1233105_1233993_-	dipeptide transporter	NA	NA	NA	NA	NA
VEH53289.1|1234007_1235009_-	dipeptide transporter	NA	NA	NA	NA	NA
VEH53291.1|1235098_1237282_-	DNA-dependent ATPase I and helicase II	NA	A7KV33	Bacillus_phage	37.6	1.1e-115
VEH53293.1|1237893_1238523_-	organic radical activating protein	NA	A0A218M2Y8	Acidovorax_phage	35.2	2.9e-11
VEH53295.1|1238529_1238955_-	6-pyruvoyl-tetrahydropterin synthase	NA	A0A1U9WRB3	Streptococcus_virus	42.7	1.3e-20
VEH53297.1|1238947_1239631_-	7-cyano-7-deazaguanine synthase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	50.2	6.6e-54
>prophage 7
LR134395	Haemophilus aegyptius strain NCTC8134 genome assembly, chromosome: 1	1993241	1352560	1357705	1993241		Aggregatibacter_phage(33.33%)	8	NA	NA
VEH53535.1|1352560_1353001_-	uncharacterised protein, phage-related	NA	D0UIM3	Aggregatibacter_phage	65.8	1.9e-49
VEH53537.1|1353144_1353495_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53539.1|1353491_1353737_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53541.1|1353733_1354630_-	recombination associated protein	NA	A0A1P8DTT8	Salmonella_phage	45.0	9.3e-56
VEH53543.1|1354754_1355507_-	Uncharacterised protein	NA	A0A2H4FRY7	Salmonella_phage	63.1	5.1e-39
VEH53545.1|1355570_1356005_-	ssDNA-binding protein	NA	L7TJL2	Pseudomonas_virus	35.1	5.7e-19
VEH53547.1|1356004_1356649_-	Uncharacterised protein	NA	A0A0M3LP90	Mannheimia_phage	71.4	4.4e-84
VEH53549.1|1356853_1357705_-	phage antirepressor protein	NA	D0UIK6	Aggregatibacter_phage	42.5	1.2e-55
>prophage 8
LR134395	Haemophilus aegyptius strain NCTC8134 genome assembly, chromosome: 1	1993241	1361170	1444617	1993241	plate,holin,terminase,protease,tail,bacteriocin,integrase	Haemophilus_phage(38.81%)	109	1370662:1370678	1400314:1400330
VEH53561.1|1361170_1362016_-	DNA-damage-inducible protein d	NA	F5A3D6	Riemerella_phage	41.9	9.4e-50
VEH53563.1|1362133_1362790_-	prophage repressor CI	NA	A0A0M3LSL8	Mannheimia_phage	57.9	1.6e-65
VEH53565.1|1362920_1363127_+	cro repressor	NA	A0A0M3LSY2	Mannheimia_phage	67.7	1.9e-17
VEH53567.1|1363147_1363444_+	phage aaphi23	NA	Q7Y5W3	Haemophilus_phage	69.4	3.8e-30
VEH53569.1|1363491_1364160_+	Probable phage repressor protein	NA	D0UIL6	Aggregatibacter_phage	52.1	2.0e-55
VEH53571.1|1364156_1364915_+	Uncharacterised protein	NA	D0UIL5	Aggregatibacter_phage	68.3	1.3e-63
VEH53573.1|1364899_1365535_+	phage replication protein	NA	NA	NA	NA	NA
VEH53575.1|1365531_1365756_+	Uncharacterised protein	NA	A0A0M3LR43	Mannheimia_phage	47.9	1.1e-10
VEH53577.1|1365792_1366212_+	recombination protein NinB	NA	Q7Y5V7	Haemophilus_phage	75.4	3.3e-56
VEH53579.1|1366208_1366301_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53581.1|1366300_1366849_+	ning recombination protein	NA	D0UIK8	Aggregatibacter_phage	62.6	1.8e-57
VEH53583.1|1366850_1367219_+	putative phage anti-termination protein Q	NA	Q7Y5V5	Haemophilus_phage	63.4	6.1e-38
VEH53585.1|1367319_1367502_+	YcfA-like protein	NA	NA	NA	NA	NA
VEH53587.1|1367533_1367983_+	Uncharacterised protein family (UPF0150)	NA	A0A0R6PJ17	Moraxella_phage	38.3	1.8e-23
VEH53589.1|1368027_1368210_-	bacteriophage phi-related protein	NA	A0A0M3LQV3	Mannheimia_phage	45.5	1.2e-05
VEH53591.1|1368807_1369677_+	antirepressor protein	NA	D0UIK6	Aggregatibacter_phage	66.9	4.6e-108
VEH53593.1|1369892_1370249_+|holin	Putative bacteriophage holin protein	holin	NA	NA	NA	NA
VEH53595.1|1370217_1370820_+	Putative phage lysozyme	NA	Q7Y5V0	Haemophilus_phage	53.9	5.6e-57
1370662:1370678	attL	GATTTATCTGTTAAAAC	NA	NA	NA	NA
VEH53597.1|1370812_1371136_+	putative bacteriophage protein	NA	Q7Y5U9	Haemophilus_phage	56.5	4.5e-21
VEH53599.1|1371330_1371678_-	transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	56.1	4.4e-22
VEH53601.1|1371661_1371913_-	bacteriophage protein/plasmid stabilization system protein	NA	A0A1S5NR91	Burkholderia_phage	50.6	6.4e-15
VEH53603.1|1371989_1372505_+|terminase	terminase small subunit	terminase	A0A1X9SFE5	Acinetobacter_phage	40.9	5.6e-21
VEH53605.1|1372491_1373835_+|terminase	phage terminase large subunit	terminase	A0A220NQL3	Acinetobacter_phage	53.7	3.1e-124
VEH53607.1|1373836_1374541_+	phage-associated protein, HI1409 family	NA	Q7Y5U6	Haemophilus_phage	68.4	1.2e-87
VEH53609.1|1374549_1375167_+	phage-associated protein, HI1409 family	NA	Q7Y5U6	Haemophilus_phage	83.9	4.8e-88
VEH53611.1|1375195_1376629_+	plasmid RP4 TraN-like protein	NA	Q7Y5U5	Haemophilus_phage	77.2	1.7e-88
VEH53613.1|1376907_1377264_+	Uncharacterised protein	NA	A0A1W6JNL0	Staphylococcus_phage	31.7	7.8e-06
VEH53615.1|1377328_1378429_+	Uncharacterized protein conserved in bacteria	NA	Q7Y5U2	Haemophilus_phage	87.0	4.4e-140
VEH53617.1|1378441_1378882_+	Uncharacterised protein	NA	D0UIJ1	Aggregatibacter_phage	71.1	2.3e-47
VEH53619.1|1378891_1379806_+	Uncharacterized protein conserved in bacteria	NA	Q7Y5U0	Haemophilus_phage	89.5	1.7e-150
VEH53620.1|1379815_1380178_+	Uncharacterised protein	NA	Q7Y5T9	Haemophilus_phage	67.3	1.5e-33
VEH53621.1|1380178_1380625_+	Uncharacterised protein	NA	Q7Y5T8	Haemophilus_phage	72.3	6.7e-55
VEH53623.1|1380621_1380993_+	Uncharacterised protein	NA	Q776V7	Haemophilus_phage	70.7	6.8e-45
VEH53625.1|1381060_1381420_+	Uncharacterised protein	NA	Q7Y5T6	Haemophilus_phage	74.6	1.1e-44
VEH53627.1|1381424_1382933_+	phage-like protein	NA	Q7Y5T5	Haemophilus_phage	86.9	4.6e-249
VEH53629.1|1383009_1383168_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53631.1|1383177_1383609_+	Protein of uncharacterised function (DUF3277)	NA	Q7Y5T4	Haemophilus_phage	93.0	2.9e-71
VEH53633.1|1383608_1384019_+	Protein of uncharacterised function (DUF2669)	NA	Q776V6	Haemophilus_phage	70.8	5.9e-50
VEH53635.1|1384169_1385153_+	Uncharacterised protein	NA	Q7Y5T2	Haemophilus_phage	66.4	2.7e-56
VEH53637.1|1385160_1386258_+|tail	Phage-related minor tail protein	tail	Q7Y5T2	Haemophilus_phage	71.9	2.9e-144
VEH53639.1|1386263_1387046_+	Uncharacterised protein	NA	Q7Y5T0	Haemophilus_phage	65.5	1.0e-82
VEH53641.1|1387039_1387360_+	Uncharacterised protein	NA	Q7Y5S9	Haemophilus_phage	82.4	1.1e-46
VEH53643.1|1387501_1387612_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53645.1|1387614_1388499_+	Phage protein D	NA	D0UIH8	Aggregatibacter_phage	89.5	1.9e-141
VEH53647.1|1388495_1389140_+|plate	phage baseplate assembly protein V	plate	Q7Y5S7	Haemophilus_phage	85.0	1.8e-85
VEH53649.1|1389136_1389490_+	Uncharacterised protein	NA	Q7Y5S5	Haemophilus_phage	89.6	2.5e-57
VEH53651.1|1389585_1390728_+	Uncharacterized homolog of phage Mu protein gp47	NA	D0UIH5	Aggregatibacter_phage	86.3	6.7e-184
VEH53653.1|1390727_1391303_+	Protein of uncharacterised function (DUF2612)	NA	D0UIH4	Aggregatibacter_phage	80.1	2.4e-89
VEH53655.1|1391312_1393478_+|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	53.5	1.7e-143
VEH53657.1|1393477_1394101_+	HP1	NA	D0UIH2	Aggregatibacter_phage	45.3	1.2e-17
VEH53659.1|1394093_1394573_+	Uncharacterised protein	NA	F6MIM0	Haemophilus_phage	55.6	1.8e-45
VEH53661.1|1395022_1395340_+|integrase	integrase	integrase	A0A0M3LRG1	Mannheimia_phage	55.2	1.1e-24
VEH53663.1|1395616_1395787_+|integrase	integrase/recombinase	integrase	A0A0M3LQN1	Mannheimia_phage	63.0	1.0e-11
VEH53665.1|1395796_1396021_+|integrase	integrase	integrase	Q19US1	Mannheimia_phage	66.2	5.4e-21
VEH53667.1|1396080_1396239_-	Uncharacterised protein	NA	A0A0M3LTD8	Mannheimia_phage	81.4	3.4e-14
VEH53669.1|1396293_1396764_-	Probable bacteriophage replication protein A	NA	Q94N00	Haemophilus_virus	39.0	6.6e-21
VEH53671.1|1396775_1396997_+	mu-like prophage protein gp29	NA	B7SDN1	Haemophilus_phage	69.4	1.5e-20
VEH53673.1|1397008_1397725_+	Uncharacterised protein	NA	A0A0M3LSH7	Mannheimia_phage	58.2	8.2e-71
VEH53675.1|1397867_1398284_+|tail	phage virion morphogenesis (tail completion) protein	tail	B7SDN8	Haemophilus_phage	71.5	4.2e-51
VEH53677.1|1398657_1399455_-|holin	phosphorylcholine transferase	holin	A0A1V0SD50	Indivirus	43.9	9.3e-07
VEH53679.1|1399454_1400156_-	protein LicC	NA	NA	NA	NA	NA
VEH53681.1|1400152_1401031_-	protein LicB	NA	NA	NA	NA	NA
1400314:1400330	attR	GTTTTAACAGATAAATC	NA	NA	NA	NA
VEH53683.1|1401030_1402059_-	phospho-2-dehydro-3-heoxyheptonate aldolase	NA	NA	NA	NA	NA
VEH53685.1|1402363_1402492_+	mu com-like protein	NA	NA	NA	NA	NA
VEH53687.1|1402558_1403095_+	Protein of uncharacterised function, DUF462	NA	NA	NA	NA	NA
VEH53689.1|1403293_1403953_+	YbeQ	NA	NA	NA	NA	NA
VEH53691.1|1403952_1404129_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEH53693.1|1404140_1404242_+	Putative TPR repeat protein	NA	NA	NA	NA	NA
VEH53695.1|1404344_1404908_+	Putative TPR repeat protein	NA	NA	NA	NA	NA
VEH53697.1|1405183_1406269_+	peptide chain release factor RF-1	NA	W8EDB3	Pseudomonas_phage	42.2	1.3e-08
VEH53699.1|1406321_1406762_+	RDD family	NA	NA	NA	NA	NA
VEH53701.1|1406761_1407640_+	N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2	NA	NA	NA	NA	NA
VEH53702.1|1407639_1408443_+	putative transcriptional regulator	NA	NA	NA	NA	NA
VEH53704.1|1408457_1409312_+	3-deoxy-D-manno-octulosonate 8-phosphate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	39.3	4.4e-47
VEH53706.1|1409371_1410319_+	putative 2-hydroxyacid dehydrogenase	NA	M1I636	Acanthocystis_turfacea_Chlorella_virus	27.8	1.7e-23
VEH53708.1|1410318_1411500_+	outer membrane-specific lipoprotein transporter subunit	NA	NA	NA	NA	NA
VEH53710.1|1411511_1412804_+	adenosylmethionine-8-amino-7-oxononanoate aminotransferase	NA	A0A1V0SKB7	Klosneuvirus	30.0	6.9e-20
VEH53712.1|1412812_1413955_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
VEH53714.1|1413964_1414612_+	dithiobiotin synthetase	NA	NA	NA	NA	NA
VEH53716.1|1414599_1415382_+	putative biotin synthesis protein BioC	NA	NA	NA	NA	NA
VEH53718.1|1415391_1416033_+	dethiobiotin synthetase 2	NA	NA	NA	NA	NA
VEH53720.1|1416114_1416798_+	outer membrane-specific lipoprotein transporter subunit	NA	G9BWD6	Planktothrix_phage	40.1	5.6e-37
VEH53722.1|1416797_1418048_+	outer membrane-specific lipoprotein transporter subunit	NA	NA	NA	NA	NA
VEH53724.1|1418266_1419355_+	3-deoxy-D-arabino-heptulosonate-7-phosphate synthase	NA	A0A0B6VT43	Edwardsiella_phage	46.0	7.8e-81
VEH53726.1|1419424_1419865_-	protein ImpA	NA	NA	NA	NA	NA
VEH53728.1|1420149_1421394_+	sodium:serine/threonine symporter	NA	NA	NA	NA	NA
VEH53730.1|1421514_1422123_+	NAD(P)H oxidoreductase	NA	NA	NA	NA	NA
VEH53732.1|1422122_1422677_+	component of anaerobic dehydrogenase	NA	NA	NA	NA	NA
VEH53734.1|1422723_1423278_-	oxidoreductase	NA	NA	NA	NA	NA
VEH53736.1|1423374_1425225_+|protease	protease iv (signal peptide peptidase)	protease	NA	NA	NA	NA
VEH53738.1|1425262_1426060_-|holin	licd protein, phosphorylcholine transferase	holin	A0A1V0SD50	Indivirus	35.5	9.3e-07
VEH53740.1|1426059_1426761_-	protein LicC	NA	NA	NA	NA	NA
VEH53742.1|1426757_1427636_-	protein LicB	NA	NA	NA	NA	NA
VEH53744.1|1427635_1428676_-	phospho-2-dehydro-3-heoxyheptonate aldolase	NA	NA	NA	NA	NA
VEH53746.1|1428746_1430759_-	5-methylaminomethyl-2-thiouridine methyltransferase	NA	NA	NA	NA	NA
VEH53748.1|1430907_1432128_+	3-oxoacyl-ACP synthase	NA	NA	NA	NA	NA
VEH53750.1|1432194_1432458_-	glutaredoxin	NA	A0A2I7SAE2	Vibrio_phage	68.8	3.6e-24
VEH53752.1|1432572_1433481_+	ribosomal protein S6 modification protein	NA	NA	NA	NA	NA
VEH53754.1|1433519_1434734_-	glutamate transporter	NA	NA	NA	NA	NA
VEH53756.1|1434775_1437019_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	36.2	7.4e-86
VEH53758.1|1437085_1438984_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	35.9	2.1e-97
VEH53760.1|1439056_1439992_-	lauryl-acyl carrier protein (ACP)-dependent acyltransferase	NA	A0A1W6JP29	Morganella_phage	39.9	1.3e-52
VEH53762.1|1440088_1441519_+	fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	27.9	1.0e-32
VEH53764.1|1441711_1441951_+	5-methylcytosine methyltransferase	NA	A0A2H4PAK4	Aphanizomenon_phage	44.1	1.0e-06
VEH53765.1|1442104_1442338_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
VEH53767.1|1442337_1442883_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
VEH53769.1|1443245_1443605_-	hemocin immunity protein	NA	NA	NA	NA	NA
VEH53771.1|1443610_1443883_-|bacteriocin	hemocin bacteriocin a	bacteriocin	NA	NA	NA	NA
VEH53773.1|1443909_1444617_-|bacteriocin	hemocin bacteriocin b	bacteriocin	NA	NA	NA	NA
