assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900637805.1_52592_E01	LR134405	Rodentibacter pneumotropicus strain NCTC8284 genome assembly, chromosome: 1	1	1601909-1602668	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1	DEDDh,DinG,cas9,cas1,cas3	 Type II-B,Type II-B,Type II-C, or Type II-C?,Type II-A	ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC,ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC,ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	36,36,36	3	3	1602275-1602303|1602472-1602501|1602471-1602500	LR134405.1_258239-258267|LR134405.1_87991-87962|LR134405.1_87991-87962	NA:NA:NA	10,11,11	11	TypeII-B,TypeII-B,TypeII-C,orTypeII-C?,TypeII-A	DEDDh,DinG,cas9,cas1,cas3	NA|94aa|up_8|LR134405.1_1596650_1596932_-,NA	NA|102aa|up_9|LR134405.1_1596217_1596523_-	PRK09330, PRK09330, cell division protein FtsZ; Validated	NA|94aa|up_8|LR134405.1_1596650_1596932_-	NA	cas9|105aa|up_7|LR134405.1_1597401_1597716_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas9|140aa|up_6|LR134405.1_1597983_1598403_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas9|132aa|up_5|LR134405.1_1598426_1598822_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas9|91aa|up_4|LR134405.1_1598767_1599040_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas9|116aa|up_3|LR134405.1_1598994_1599342_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas9|346aa|up_2|LR134405.1_1599343_1600381_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|266aa|up_1|LR134405.1_1600613_1601411_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	NA|50aa|up_0|LR134405.1_1601522_1601672_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|131aa|down_0|LR134405.1_1602777_1603170_-	PRK03826, PRK03826, 5'-nucleotidase; Provisional	NA|65aa|down_1|LR134405.1_1603175_1603370_-	PRK03826, PRK03826, 5'-nucleotidase; Provisional	NA|341aa|down_2|LR134405.1_1603377_1604400_-	TIGR02038, Protease_degS_precursor	NA|374aa|down_3|LR134405.1_1604400_1605522_-	PRK10786, ribD, bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA|58aa|down_4|LR134405.1_1605524_1605698_-	PRK00464, nrdR, transcriptional repressor NrdR	NA|107aa|down_5|LR134405.1_1605652_1605973_-	PRK00464, nrdR, transcriptional repressor NrdR	NA|669aa|down_6|LR134405.1_1606029_1608036_-	COG1330, RecC, Exonuclease V gamma subunit [DNA replication, recombination, and repair]	NA|145aa|down_7|LR134405.1_1608077_1608512_-	pfam04257, Exonuc_V_gamma, Exodeoxyribonuclease V, gamma subunit	NA|254aa|down_8|LR134405.1_1608660_1609422_-	COG1330, RecC, Exonuclease V gamma subunit [DNA replication, recombination, and repair]	NA|98aa|down_9|LR134405.1_1609483_1609777_-	pfam17344, DUF5374, Family of unknown function (DUF5374)
GCA_900637805.1_52592_E01	LR134405	Rodentibacter pneumotropicus strain NCTC8284 genome assembly, chromosome: 1	2	1752864-1753002	2	CRISPRCasFinder	no		DEDDh,DinG,cas9,cas1,cas3	Orphan	ACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGCCTCGTTTCCCGCTCCAA	49	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas9,cas1,cas3	NA|87aa|up_5|LR134405.1_1750200_1750461_-,NA	NA|497aa|up_9|LR134405.1_1745654_1747145_-	PRK11177, PRK11177, phosphoenolpyruvate-protein phosphotransferase PtsI	NA|54aa|up_8|LR134405.1_1747213_1747375_-	PRK11177, PRK11177, phosphoenolpyruvate-protein phosphotransferase PtsI	NA|86aa|up_7|LR134405.1_1747475_1747733_-	PRK10850, PRK10850, phosphocarrier protein Hpr	NA|741aa|up_6|LR134405.1_1747921_1750144_-	TIGR02794, Protein_TolA, TolA protein	NA|87aa|up_5|LR134405.1_1750200_1750461_-	NA	NA|151aa|up_4|LR134405.1_1751086_1751539_-	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA	NA|172aa|up_3|LR134405.1_1751609_1752125_-	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA	NA|37aa|up_2|LR134405.1_1752195_1752306_+	PRK05359, PRK05359, oligoribonuclease; Provisional	NA|57aa|up_1|LR134405.1_1752302_1752473_+	PRK05359, PRK05359, oligoribonuclease; Provisional	NA|91aa|up_0|LR134405.1_1752469_1752742_+	PRK05359, PRK05359, oligoribonuclease; Provisional	NA|144aa|down_0|LR134405.1_1753194_1753626_+	PRK10646, PRK10646, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA|342aa|down_1|LR134405.1_1753792_1754818_+	PRK10431, PRK10431, N-acetylmuramoyl-l-alanine amidase II; Provisional	NA|630aa|down_2|LR134405.1_1754908_1756798_+	PRK00095, mutL, DNA mismatch repair endonuclease MutL	NA|312aa|down_3|LR134405.1_1756798_1757734_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|492aa|down_4|LR134405.1_1757738_1759214_+	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA|284aa|down_5|LR134405.1_1759198_1760050_+	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA|213aa|down_6|LR134405.1_1760046_1760685_+	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA|177aa|down_7|LR134405.1_1766697_1767228_-	TIGR02380, ECA_wecA, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase	NA|182aa|down_8|LR134405.1_1767227_1767773_-	TIGR02380, ECA_wecA, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase	NA|136aa|down_9|LR134405.1_1767862_1768270_+	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase
