assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900637935.1_53146_H01	LR134474	Kurthia zopfii strain NCTC404 genome assembly, chromosome: 1	1	709310-709420	1	CRISPRCasFinder	no		DEDDh,cas3,cas14j,WYL,csa3,DinG,cas5,cas8c,cas7	Orphan	AAGTCAGATGCTCTACCAACTGAGCTA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,cas14j,WYL,csa3,DinG,cas5,cas8c,cas7	NA,NA	NA|493aa|up_9|LR134474.1_692570_694049_-	PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|113aa|up_8|LR134474.1_694041_694380_-	PRK08600, PRK08600, putative monovalent cation/H+ antiporter subunit C; Reviewed	NA|143aa|up_7|LR134474.1_694379_694808_-	PRK12573, PRK12573, Na(+)/H(+) antiporter subunit B	NA|800aa|up_6|LR134474.1_694794_697194_-	PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed	NA|222aa|up_5|LR134474.1_697548_698214_+	cd01987, USP_OKCHK, USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family	NA|403aa|up_4|LR134474.1_698254_699463_-	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters	NA|319aa|up_3|LR134474.1_699585_700542_-	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate	NA|188aa|up_2|LR134474.1_700720_701284_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|232aa|up_1|LR134474.1_701328_702024_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|302aa|up_0|LR134474.1_702111_703017_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|497aa|down_0|LR134474.1_715095_716586_-	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|172aa|down_1|LR134474.1_716740_717256_-	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|123aa|down_2|LR134474.1_717252_717621_-	pfam02152, FolB, Dihydroneopterin aldolase	NA|263aa|down_3|LR134474.1_717633_718422_-	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes	NA|276aa|down_4|LR134474.1_718423_719251_-	PRK07650, PRK07650, 4-amino-4-deoxychorismate lyase; Provisional	NA|194aa|down_5|LR134474.1_719250_719832_-	PRK05670, PRK05670, anthranilate synthase component II; Provisional	NA|465aa|down_6|LR134474.1_719828_721223_-	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|313aa|down_7|LR134474.1_721357_722296_-	TIGR01139, Cysteine_synthase, cysteine synthase A	NA|436aa|down_8|LR134474.1_722448_723756_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|297aa|down_9|LR134474.1_723977_724868_-	PRK00114, hslO, Hsp33 family molecular chaperone HslO
GCA_900637935.1_53146_H01	LR134474	Kurthia zopfii strain NCTC404 genome assembly, chromosome: 1	2	1916547-1917506	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	DEDDh,cas3,cas5,cas8c,cas7	DEDDh,cas3,cas14j,WYL,csa3,DinG,cas5,cas8c,cas7	Type I-U, Type I-U?,Type I-C	GTCTCACTCTATATGAGTGAGTGGATTGAAAT,GTCTCACTCTATATGAGTGAGTGGATTGAAATA,GTCTCACTCTATATGAGTGAGTGGATTGAAATA	32,33,33	0	0	NA	NA	NA:NA:NA	14,14,14	14	TypeI-U?,TypeI-U,TypeI-C	DEDDh,cas3,cas14j,WYL,csa3,DinG,cas5,cas8c,cas7	NA|54aa|up_8|LR134474.1_1907683_1907845_-,NA|70aa|up_6|LR134474.1_1910418_1910628_+,NA|186aa|up_4|LR134474.1_1911841_1912399_-,NA|65aa|down_4|LR134474.1_1919613_1919808_-	NA|339aa|up_9|LR134474.1_1906642_1907659_-	COG1893, ApbA, Ketopantoate reductase [Coenzyme metabolism]	NA|54aa|up_8|LR134474.1_1907683_1907845_-	NA	NA|775aa|up_7|LR134474.1_1907945_1910270_+	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|70aa|up_6|LR134474.1_1910418_1910628_+	NA	NA|357aa|up_5|LR134474.1_1910644_1911715_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|186aa|up_4|LR134474.1_1911841_1912399_-	NA	DEDDh|269aa|up_3|LR134474.1_1912417_1913224_-	PRK06195, PRK06195, DNA polymerase III subunit epsilon; Validated	NA|169aa|up_2|LR134474.1_1913346_1913853_+	cd01055, Nonheme_Ferritin, nonheme-containing ferritins	NA|323aa|up_1|LR134474.1_1914585_1915554_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|122aa|up_0|LR134474.1_1915504_1915870_-	pfam14690, zf-ISL3, zinc-finger of transposase IS204/IS1001/IS1096/IS1165	NA|204aa|down_0|LR134474.1_1917655_1918267_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|116aa|down_1|LR134474.1_1918426_1918774_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|131aa|down_2|LR134474.1_1918816_1919209_-	pfam13007, LZ_Tnp_IS66, Transposase C of IS166 homeodomain	NA|93aa|down_3|LR134474.1_1919338_1919617_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|65aa|down_4|LR134474.1_1919613_1919808_-	NA	cas3|698aa|down_5|LR134474.1_1919975_1922069_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|222aa|down_6|LR134474.1_1922081_1922747_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|541aa|down_7|LR134474.1_1922728_1924351_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|302aa|down_8|LR134474.1_1924350_1925256_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	NA|282aa|down_9|LR134474.1_1926455_1927301_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed
GCA_900637935.1_53146_H01	LR134474	Kurthia zopfii strain NCTC404 genome assembly, chromosome: 1	3	1925459-1926419	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	DEDDh,cas3,cas5,cas8c,cas7	DEDDh,cas3,cas14j,WYL,csa3,DinG,cas5,cas8c,cas7	Type I-U, Type I-U?,Type I-C	GTCTCACTCTACATGAGTGAGTGGATTGAAAT,GTCTCACTCTACATGAGTGAGTGGATTGAAAT,GTCTCACTCTACATGAGTGAGTGGATTGAAAT	32,32,32	0	0	NA	NA	I-C:I-C:I-C	14,14,14	14	TypeI-U?,TypeI-U,TypeI-C	DEDDh,cas3,cas14j,WYL,csa3,DinG,cas5,cas8c,cas7	NA|65aa|up_4|LR134474.1_1919613_1919808_-,NA|162aa|down_7|LR134474.1_1934470_1934956_+,NA|102aa|down_8|LR134474.1_1935009_1935315_-,NA|123aa|down_9|LR134474.1_1935391_1935760_-	NA|122aa|up_9|LR134474.1_1915504_1915870_-	pfam14690, zf-ISL3, zinc-finger of transposase IS204/IS1001/IS1096/IS1165	NA|204aa|up_8|LR134474.1_1917655_1918267_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|116aa|up_7|LR134474.1_1918426_1918774_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|131aa|up_6|LR134474.1_1918816_1919209_-	pfam13007, LZ_Tnp_IS66, Transposase C of IS166 homeodomain	NA|93aa|up_5|LR134474.1_1919338_1919617_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|65aa|up_4|LR134474.1_1919613_1919808_-	NA	cas3|698aa|up_3|LR134474.1_1919975_1922069_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|222aa|up_2|LR134474.1_1922081_1922747_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|541aa|up_1|LR134474.1_1922728_1924351_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|302aa|up_0|LR134474.1_1924350_1925256_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	NA|282aa|down_0|LR134474.1_1926455_1927301_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|94aa|down_1|LR134474.1_1927303_1927585_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|536aa|down_2|LR134474.1_1927997_1929605_+	cd05654, M20_ArgE_RocB, M20 Peptidase arginine utilization protein, RocB	NA|498aa|down_3|LR134474.1_1930215_1931709_+	PRK00047, glpK, glycerol kinase GlpK	NA|75aa|down_4|LR134474.1_1931764_1931989_-	pfam11213, DUF3006, Protein of unknown function (DUF3006)	NA|302aa|down_5|LR134474.1_1931989_1932895_-	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|441aa|down_6|LR134474.1_1933077_1934400_+	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like	NA|162aa|down_7|LR134474.1_1934470_1934956_+	NA	NA|102aa|down_8|LR134474.1_1935009_1935315_-	NA	NA|123aa|down_9|LR134474.1_1935391_1935760_-	NA
GCA_900637935.1_53146_H01	LR134474	Kurthia zopfii strain NCTC404 genome assembly, chromosome: 1	4	2941292-2941402	4	CRISPRCasFinder	no		DEDDh,cas3,cas14j,WYL,csa3,DinG,cas5,cas8c,cas7	Orphan	AAGTCAGATGCTCTACCAACTGAGCTA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,cas14j,WYL,csa3,DinG,cas5,cas8c,cas7	NA|150aa|up_8|LR134474.1_2928716_2929166_-,NA	NA|366aa|up_9|LR134474.1_2927513_2928611_-	cd01941, YeiC_kinase_like, YeiC-like sugar kinase	NA|150aa|up_8|LR134474.1_2928716_2929166_-	NA	NA|273aa|up_7|LR134474.1_2929307_2930126_-	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated	NA|274aa|up_6|LR134474.1_2930145_2930967_-	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	NA|576aa|up_5|LR134474.1_2930954_2932682_-	COG1165, MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism]	NA|463aa|up_4|LR134474.1_2932671_2934060_-	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|311aa|up_3|LR134474.1_2934177_2935110_-	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|323aa|up_2|LR134474.1_2935237_2936206_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|403aa|up_1|LR134474.1_2936363_2937572_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|436aa|up_0|LR134474.1_2937932_2939240_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|295aa|down_0|LR134474.1_2946916_2947801_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|240aa|down_1|LR134474.1_2947948_2948668_+	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|330aa|down_2|LR134474.1_2948686_2949676_+	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|238aa|down_3|LR134474.1_2949688_2950402_+	cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain	NA|415aa|down_4|LR134474.1_2950455_2951700_-	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	NA|398aa|down_5|LR134474.1_2951817_2953011_-	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional	NA|515aa|down_6|LR134474.1_2953111_2954656_-	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional	NA|444aa|down_7|LR134474.1_2954798_2956130_+	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|125aa|down_8|LR134474.1_2956153_2956528_-	PRK08059, PRK08059, general stress protein 13; Validated	NA|443aa|down_9|LR134474.1_2956740_2958069_+	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain
