The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134490	Haemophilus influenzae strain NCTC11873 genome assembly, chromosome: 1	1948880	924660	1006899	1948880	tRNA,integrase,holin,portal,protease,terminase,capsid,tail	Haemophilus_virus(73.33%)	76	930596:930613	989531:989548
VEI54964.1|924660_925548_+|protease	modulator for HflB protease specific for phage lambda cII repressor	protease	NA	NA	NA	NA
VEI54966.1|925590_926025_-	putative protein-S-isoprenylcysteine methyltransferase	NA	NA	NA	NA	NA
VEI54968.1|926186_927314_-	N-acetylneuraminic acid mutarotase	NA	NA	NA	NA	NA
VEI54970.1|927489_929340_-	putative sialic acid transporter, TRAP-type C4-dicarboxylate transport system, large permease component	NA	NA	NA	NA	NA
VEI54972.1|929404_930394_-	transporter	NA	NA	NA	NA	NA
930596:930613	attL	CAAAAATATTCTTTAAAA	NA	NA	NA	NA
VEI54974.1|930743_931430_+	N-acetylmannosamine-6-P epimerase	NA	NA	NA	NA	NA
VEI54976.1|931474_932377_+	N-acetylmannosamine kinase	NA	NA	NA	NA	NA
VEI54978.1|932369_933236_+	putative HTH-type transcriptional regulator	NA	NA	NA	NA	NA
VEI54980.1|933246_934128_+	N-acetylneuraminate lyase	NA	NA	NA	NA	NA
VEI54982.1|934270_934690_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
VEI54984.1|934809_935082_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
VEI54986.1|935159_936308_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
VEI54988.1|936525_937662_-	Outer membrane protein P2	NA	NA	NA	NA	NA
VEI54990.1|937930_938710_-	Protein of uncharacterised function (DUF3800)	NA	NA	NA	NA	NA
VEI54992.1|938873_939338_-	ribonuclease HI, degrades RNA of DNA-RNA hybrids	NA	J9Q745	Salmonella_phage	52.9	1.1e-44
VEI54994.1|939398_940169_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	36.1	2.2e-37
VEI54996.1|940851_942363_+	GTP-binding protein	NA	NA	NA	NA	NA
VEI54998.1|942423_943632_-	arabinose transporter	NA	NA	NA	NA	NA
VEI55000.1|943771_944812_-	Uncharacterized protein involved in outer membrane biogenesis	NA	NA	NA	NA	NA
VEI55002.1|944815_945403_-	2'-deoxycytidine 5'-triphosphate deaminase	NA	I4AZP2	Saccharomonospora_phage	40.5	2.8e-24
VEI55004.1|945411_946053_-	uridine/cytidine kinase	NA	A0A1V0SAA3	Catovirus	38.1	1.4e-34
VEI55006.1|946218_947259_+	ferric transport system AfuABC periplasmic-binding protein component	NA	NA	NA	NA	NA
VEI55008.1|947422_949480_+	ferric transport system permease protein FbpB	NA	NA	NA	NA	NA
VEI55010.1|949504_950554_+	CP4-6 prophage; ferric transporter subunit	NA	G3M9Y6	Bacillus_virus	38.1	4.4e-33
VEI55012.1|950642_951959_-	permease	NA	A0A0R6PHV4	Moraxella_phage	80.7	3.1e-185
VEI55014.1|952192_952723_+	inorganic pyrophosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	36.9	8.3e-20
VEI55016.1|953182_954196_-|integrase	integrase	integrase	Q94N03	Haemophilus_virus	100.0	7.5e-195
VEI55018.1|954195_954960_-|tRNA	tRNA_anti-like	tRNA	P79672	Haemophilus_phage	99.6	2.4e-137
VEI55020.1|954969_955152_-	Uncharacterised protein	NA	A0A0R6PI25	Moraxella_phage	45.8	3.5e-10
VEI55022.1|955151_955727_-	probable cI repressor	NA	Q94N02	Haemophilus_virus	100.0	6.1e-109
VEI55024.1|955845_956058_+	putative cox protein	NA	P79674	Haemophilus_phage	100.0	1.2e-30
VEI55026.1|956193_956697_+	phage protein	NA	P79675	Haemophilus_phage	100.0	1.8e-88
VEI55028.1|956715_957084_+	Uncharacterised protein	NA	Q94N01	Haemophilus_virus	100.0	1.6e-67
VEI55030.1|957083_957269_+	Uncharacterised protein	NA	Q775F8	Haemophilus_virus	100.0	8.0e-31
VEI55032.1|957280_957562_+	Uncharacterised protein	NA	Q775F7	Haemophilus_virus	100.0	6.1e-46
VEI55034.1|957612_957873_+	Uncharacterised protein	NA	Q775F6	Haemophilus_virus	100.0	3.6e-45
VEI55036.1|957875_960203_+	probable rep protein	NA	Q94N00	Haemophilus_virus	100.0	0.0e+00
VEI55038.1|960214_960526_+	Uncharacterised protein	NA	Q94MZ9	Haemophilus_virus	100.0	2.9e-49
VEI55040.1|960535_961054_+	putative dam methylase	NA	Q94MZ8	Haemophilus_virus	100.0	4.6e-100
VEI55042.1|961354_961756_+	Antitoxin HicB	NA	Q775F5	Haemophilus_virus	100.0	2.3e-70
VEI55044.1|962121_963159_-|capsid,portal	probable capsid portal protein	capsid,portal	Q94MZ7	Haemophilus_virus	100.0	1.3e-199
VEI55046.1|963148_964972_-|terminase	probable terminase, ATPase subunit	terminase	Q94MZ6	Haemophilus_virus	100.0	0.0e+00
VEI55048.1|965175_966069_+|capsid	probable capsid scaffold protein	capsid	Q94MZ5	Haemophilus_virus	100.0	1.5e-151
VEI55050.1|966071_967082_+|capsid	phage major capsid protein	capsid	Q94MZ4	Haemophilus_virus	100.0	1.4e-188
VEI55052.1|967095_967941_+|terminase	probable terminase, endonuclease subunit	terminase	Q94MZ3	Haemophilus_virus	100.0	1.3e-155
VEI55054.1|967933_968386_+	phage protein	NA	Q94MZ2	Haemophilus_virus	100.0	3.3e-78
VEI55056.1|968373_968859_+|tail	P2 phage tail completion protein R (GpR)	tail	Q94MZ1	Haemophilus_virus	99.4	1.3e-88
VEI55058.1|968848_969544_+	Phage virion morphogenesis family	NA	Q94MZ0	Haemophilus_virus	100.0	1.3e-126
VEI55060.1|969622_969781_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55062.1|969815_970946_+|tail	tail sheath phage protein	tail	Q94MY9	Haemophilus_virus	99.7	1.7e-219
VEI55064.1|970949_971402_+	phage protein	NA	Q94MY8	Haemophilus_virus	100.0	6.9e-76
VEI55066.1|971488_971725_+|holin	putative holin	holin	Q94MY7	Haemophilus_virus	100.0	4.8e-36
VEI55068.1|971717_972278_+	lysozyme precursor phage protein	NA	Q94MY6	Haemophilus_virus	100.0	7.2e-99
VEI55070.1|972277_972610_+	Uncharacterised protein	NA	Q94MY5	Haemophilus_virus	100.0	6.1e-53
VEI55072.1|972802_973111_+	phage protein	NA	Q775G2	Haemophilus_virus	100.0	1.2e-47
VEI55074.1|973299_975429_+	Phage-related protein	NA	Q94MY4	Haemophilus_virus	100.0	0.0e+00
VEI55076.1|975432_975768_+	phage protein	NA	Q94MY3	Haemophilus_virus	100.0	6.1e-53
VEI55078.1|975760_976930_+	phage protein	NA	Q94MY2	Haemophilus_virus	99.7	5.0e-219
VEI55080.1|976939_977467_+|tail	Phage tail protein (Tail_P2_I)	tail	Q94MY1	Haemophilus_virus	100.0	7.5e-98
VEI55082.1|977490_980223_+|tail	probable tail fiber protein	tail	Q94MY0	Haemophilus_virus	100.0	0.0e+00
VEI55084.1|980234_980867_+	Uncharacterised protein	NA	Q94MX9	Haemophilus_virus	100.0	1.6e-110
VEI55086.1|980879_981647_+	Uncharacterised protein	NA	Q94MX8	Haemophilus_virus	100.0	1.5e-134
VEI55088.1|981633_982194_+	phage protein	NA	Q94MX7	Haemophilus_virus	100.0	3.3e-83
VEI55090.1|982194_983796_+	phage protein	NA	Q94MX6	Haemophilus_virus	100.0	1.1e-285
VEI55092.1|984791_985349_-	phosphatidylglycerophosphate synthetase	NA	NA	NA	NA	NA
VEI55094.1|985449_986052_-	peroxiredoxin	NA	NA	NA	NA	NA
VEI55096.1|986188_987376_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
VEI55098.1|987760_989122_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
VEI55100.1|989234_989741_+	Uncharacterized integral membrane protein	NA	NA	NA	NA	NA
989531:989548	attR	TTTTAAAGAATATTTTTG	NA	NA	NA	NA
VEI55102.1|989790_990858_-	zinc transporter subunit: periplasmic-binding component of ABC superfamily	NA	NA	NA	NA	NA
VEI55104.1|991035_991806_-	high-affinity zinc transporter periplasmic component	NA	NA	NA	NA	NA
VEI55106.1|991805_992915_-	membrane-bound lytic murein transglycosylase A	NA	NA	NA	NA	NA
VEI55108.1|993309_995445_+	putative methyltransferase	NA	NA	NA	NA	NA
VEI55110.1|1002047_1004285_-	TonB-dependent heme receptor A	NA	NA	NA	NA	NA
VEI55112.1|1004645_1005275_-	glutathionine S-transferase	NA	NA	NA	NA	NA
VEI55114.1|1005609_1006899_-|tRNA	seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.8	4.3e-94
>prophage 2
LR134490	Haemophilus influenzae strain NCTC11873 genome assembly, chromosome: 1	1948880	1312183	1380083	1948880	tRNA,lysis,integrase,head,holin,portal,protease,plate,terminase,capsid,tail	Mannheimia_phage(50.0%)	72	1307448:1307473	1382202:1382227
1307448:1307473	attL	CCTTCCCCTGCTTGCGGGGGAAGGTG	NA	NA	NA	NA
VEI55649.1|1312183_1313575_-|protease	serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	31.2	7.2e-23
VEI55651.1|1313768_1314659_+	acetyl-CoA carboxylase, beta (carboxyltranferase) subunit	NA	NA	NA	NA	NA
VEI55653.1|1314660_1315965_+	folylpolyglutamate synthase	NA	NA	NA	NA	NA
VEI55655.1|1316197_1316872_-	SanA	NA	NA	NA	NA	NA
VEI55657.1|1317041_1318118_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
VEI55659.1|1318172_1320815_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	32.5	1.6e-103
VEI55661.1|1321383_1323147_-	YcaO-like family	NA	NA	NA	NA	NA
VEI55663.1|1323560_1324262_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
VEI55665.1|1324312_1325173_-	tellurite resistance protein	NA	NA	NA	NA	NA
VEI55667.1|1325285_1327334_-|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0S905	Catovirus	25.2	2.4e-27
VEI55669.1|1327484_1328597_+	antiporter inner membrane protein	NA	NA	NA	NA	NA
VEI55671.1|1328643_1329306_-	dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive	NA	NA	NA	NA	NA
VEI55673.1|1329419_1330094_+	acylneuraminate cytidylyltransferase	NA	NA	NA	NA	NA
VEI55675.1|1331474_1332485_-|portal	portal vertex protein	portal	Q19UT6	Mannheimia_phage	61.9	6.0e-120
VEI55677.1|1332494_1333037_-	Terminase, ATPase subunit	NA	E5E3X0	Burkholderia_phage	50.0	3.1e-46
VEI55679.1|1333027_1334275_-	Terminase, ATPase subunit	NA	A0A0M3LRV4	Mannheimia_phage	72.9	2.6e-149
VEI55681.1|1334439_1335255_+|capsid	Probable bacteriophage capsid scaffolding protein	capsid	A0A0M3LNM2	Mannheimia_phage	61.9	2.0e-65
VEI55683.1|1335276_1336326_+|capsid	major capsid protein	capsid	Q19UT3	Mannheimia_phage	51.9	5.7e-89
VEI55685.1|1336337_1336988_+|terminase	terminase, endonuclease subunit	terminase	Q19US0	Mannheimia_phage	45.5	9.1e-45
VEI55687.1|1337280_1337787_+|head	putative phage head completion	head	A0A0M3LNL8	Mannheimia_phage	51.0	2.8e-33
VEI55689.1|1337786_1337996_+|tail	Probable bacteriophage tail protein X	tail	A0A1S6KZY4	Salmonella_phage	40.6	3.5e-06
VEI55691.1|1337997_1338219_+|holin	holin	holin	NA	NA	NA	NA
VEI55693.1|1338211_1338730_+	phage-like lysozyme	NA	A0A0M3LPQ1	Mannheimia_phage	46.6	3.3e-37
VEI55695.1|1338714_1339065_+|lysis	phage lysis regulatory protein, LysB family	lysis	NA	NA	NA	NA
VEI55697.1|1339239_1339455_+	DnaK suppressor protein	NA	A0A0M3LS11	Mannheimia_phage	48.6	2.7e-09
VEI55699.1|1339564_1340035_+|tail	Probable bacteriophage tail completion protein	tail	E5G6N3	Salmonella_phage	46.3	1.2e-27
VEI55701.1|1340034_1340493_+|tail	Probable bacteriophage tail completion protein	tail	A0A2H4J927	uncultured_Caudovirales_phage	51.1	7.9e-27
VEI55703.1|1340470_1340743_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55705.1|1341021_1341369_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55707.1|1341441_1344099_+|tail	phage-related tail protein	tail	A0A0M3LPE0	Mannheimia_phage	36.6	2.1e-127
VEI55709.1|1344199_1344757_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55711.1|1344765_1345194_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55713.1|1345303_1345897_+|plate	phage P2-like baseplate assembly protein	plate	A0A0M3LPY9	Mannheimia_phage	66.5	2.7e-43
VEI55715.1|1345898_1346237_+|plate	baseplate assembly protein W	plate	Q19UQ6	Mannheimia_phage	56.6	4.5e-19
VEI55717.1|1346233_1347148_+|plate	phage-like baseplate assembly protein	plate	Q19UQ5	Mannheimia_phage	59.2	5.1e-94
VEI55719.1|1347134_1347674_+|tail	Probable bacteriophage tail protein gpI	tail	Q19UQ4	Mannheimia_phage	52.8	1.2e-50
VEI55721.1|1347682_1350178_+|tail	Probable phage tail-fiber protein	tail	Q94MY0	Haemophilus_virus	66.2	1.8e-237
VEI55723.1|1350188_1350740_+|tail	Putative bacteriophage tail collar protein	tail	Q94MX9	Haemophilus_virus	50.5	2.7e-42
VEI55725.1|1350732_1351212_+	Uncharacterised protein	NA	F6MIM0	Haemophilus_phage	55.0	2.7e-46
VEI55727.1|1351356_1352541_+|tail	phage tail sheath-like protein	tail	A0A1S6KZY7	Salmonella_phage	48.2	3.0e-102
VEI55729.1|1352544_1353051_+|tail	phage-related tail protein	tail	Q19UP8	Mannheimia_phage	60.1	3.2e-53
VEI55731.1|1353138_1353438_+|tail	Probable bacteriophage tail protein E	tail	A0A0F7LBN9	Escherichia_phage	40.7	3.3e-10
VEI55733.1|1353437_1353584_+|tail	Probable bacteriophage tail protein E+E'	tail	E5E3Q0	Burkholderia_phage	65.0	2.2e-07
VEI55735.1|1353751_1354189_+|tail	phage-related tail protein	tail	A0A0M3LQ18	Mannheimia_phage	57.4	1.2e-40
VEI55737.1|1354188_1355382_+	regulator of late gene expression	NA	R9QBT3	Mannheimia_phage	52.3	1.7e-105
VEI55739.1|1355407_1355647_-	Excalibur calcium-binding domain	NA	NA	NA	NA	NA
VEI55741.1|1355643_1356150_-	BRCT domain type II	NA	Q19UP0	Mannheimia_phage	43.7	7.9e-36
VEI55743.1|1356158_1356854_-	phage repressor	NA	A0A0M3LPF9	Mannheimia_phage	38.8	2.0e-34
VEI55745.1|1356973_1357219_+	Uncharacterized protein conserved in bacteria, prophage-related	NA	G8C7U2	Escherichia_phage	46.0	6.1e-10
VEI55748.1|1357375_1357618_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55750.1|1357682_1357925_+	Uncharacterised protein	NA	Q19UN6	Mannheimia_phage	68.1	1.2e-21
VEI55752.1|1358015_1358279_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55754.1|1358296_1358677_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55756.1|1358680_1358923_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55758.1|1358919_1359033_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55760.1|1359048_1359351_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55762.1|1359360_1360647_+	cytosine-specific methyltransferase	NA	A0A2I7QRH3	Vibrio_phage	47.1	8.5e-95
VEI55764.1|1360659_1362843_+	Probable bacteriophage replication protein A	NA	Q94N00	Haemophilus_virus	42.8	1.9e-166
VEI55766.1|1362898_1363408_+	Uncharacterised protein	NA	A0A0M3LTD8	Mannheimia_phage	42.6	4.8e-25
VEI55768.1|1363407_1363575_+	DNA binding domain, excisionase family	NA	NA	NA	NA	NA
VEI55770.1|1363555_1364887_-|integrase	phage integrase family protein	integrase	A0A1V0E8G8	Vibrio_phage	29.1	7.9e-43
VEI55772.1|1366134_1366590_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
VEI55774.1|1366606_1368094_+	transcription elongation factor NusA	NA	NA	NA	NA	NA
VEI55776.1|1368105_1370595_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	26.0	3.5e-28
VEI55778.1|1370673_1373856_-	type I restriction enzyme HindVIIP R protein	NA	A0A220A398	Liberibacter_phage	27.4	3.3e-79
VEI55780.1|1373967_1374294_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55782.1|1374304_1374724_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI55784.1|1374760_1375600_-	FRG domain	NA	NA	NA	NA	NA
VEI55786.1|1375601_1376948_-	type I restriction/modification specificity protein	NA	NA	NA	NA	NA
VEI55788.1|1376940_1378272_-	type i restriction enzyme hindviip m protein	NA	A0A2H4UVW8	Bodo_saltans_virus	21.6	1.7e-08
VEI55790.1|1378776_1379163_+	30s ribosome binding factor	NA	NA	NA	NA	NA
VEI55792.1|1379162_1380083_+|tRNA	tRNA pseudouridine synthase B	tRNA	NA	NA	NA	NA
1382202:1382227	attR	CCTTCCCCTGCTTGCGGGGGAAGGTG	NA	NA	NA	NA
>prophage 3
LR134490	Haemophilus influenzae strain NCTC11873 genome assembly, chromosome: 1	1948880	1467163	1475314	1948880	integrase,tail	Mannheimia_phage(33.33%)	14	1466715:1466728	1469746:1469759
1466715:1466728	attL	AAAAATTAACAAAA	NA	NA	NA	NA
VEI56007.1|1467163_1467613_+|integrase	putative integrase/recombinase	integrase	A0A0M3LQN1	Mannheimia_phage	48.0	2.4e-20
VEI56009.1|1467778_1467877_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56011.1|1468839_1469061_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56013.1|1469075_1469246_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
VEI56015.1|1469683_1470529_-	DNA-damage-inducible protein d	NA	F5A3D6	Riemerella_phage	41.6	3.6e-49
1469746:1469759	attR	TTTTGTTAATTTTT	NA	NA	NA	NA
VEI56017.1|1470646_1471303_-	prophage repressor CI	NA	A0A0M3LSL8	Mannheimia_phage	57.9	2.8e-65
VEI56019.1|1471433_1471640_+	cro repressor	NA	A0A0M3LSY2	Mannheimia_phage	66.2	9.6e-17
VEI56021.1|1471660_1471867_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56023.1|1471866_1472202_+	Probable phage repressor protein	NA	A0A2I7RHG4	Vibrio_phage	65.5	8.6e-31
VEI56025.1|1472198_1472411_+	putative phage DNA replication protein O	NA	NA	NA	NA	NA
VEI56027.1|1473074_1474175_+	Uncharacterized protein conserved in bacteria	NA	Q7Y5U2	Haemophilus_phage	85.7	2.0e-140
VEI56029.1|1474187_1474643_+	Protein of uncharacterised function (DUF2612)	NA	D0UIH4	Aggregatibacter_phage	79.4	8.3e-61
VEI56031.1|1474653_1474764_+|tail	tail fiber protein	tail	Q7Y5S2	Haemophilus_phage	93.9	3.2e-11
VEI56033.1|1474714_1475314_+|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	52.1	3.5e-35
>prophage 4
LR134490	Haemophilus influenzae strain NCTC11873 genome assembly, chromosome: 1	1948880	1571301	1645282	1948880	tRNA,integrase,holin,protease,plate,terminase,tail	Mannheimia_phage(18.0%)	103	1584031:1584050	1654703:1654722
VEI56190.1|1571301_1572099_+|holin	phosphorylcholine transferase	holin	A0A1V0SD50	Indivirus	46.7	1.0e-05
VEI56192.1|1572136_1573984_-|protease	protease iv (signal peptide peptidase)	protease	NA	NA	NA	NA
VEI56194.1|1574081_1574636_+	oxidoreductase	NA	NA	NA	NA	NA
VEI56196.1|1574683_1574989_-	component of anaerobic dehydrogenase	NA	NA	NA	NA	NA
VEI56198.1|1575228_1575843_-	NAD(P)H oxidoreductase	NA	NA	NA	NA	NA
VEI56200.1|1575963_1577208_-	sodium:serine/threonine symporter	NA	NA	NA	NA	NA
VEI56202.1|1577491_1577932_+	protein ImpA	NA	NA	NA	NA	NA
VEI56204.1|1578001_1579090_-	3-deoxy-D-arabino-heptulosonate-7-phosphate synthase	NA	A0A1Z1LYN9	Serratia_phage	47.0	7.8e-81
VEI56206.1|1579307_1580561_-	outer membrane-specific lipoprotein transporter subunit	NA	NA	NA	NA	NA
VEI56208.1|1580557_1581241_-	outer membrane-specific lipoprotein transporter subunit	NA	G9BWD6	Planktothrix_phage	40.1	5.6e-37
VEI56210.1|1581322_1581964_-	dethiobiotin synthetase 2	NA	NA	NA	NA	NA
VEI56212.1|1581972_1582755_-	malonyl-CoA O-methyltransferase BioC	NA	NA	NA	NA	NA
VEI56214.1|1582742_1583390_-	dithiobiotin synthetase	NA	NA	NA	NA	NA
VEI56216.1|1583399_1584542_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
1584031:1584050	attL	AAAGTGCGGTCAAATTTTCC	NA	NA	NA	NA
VEI56218.1|1584528_1585833_-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase	NA	A0A1V0SKB7	Klosneuvirus	30.5	7.0e-20
VEI56220.1|1585853_1587035_-	outer membrane-specific lipoprotein transporter subunit	NA	NA	NA	NA	NA
VEI56222.1|1587034_1587982_-	putative 2-hydroxyacid dehydrogenase	NA	M1I636	Acanthocystis_turfacea_Chlorella_virus	28.1	1.7e-23
VEI56224.1|1588040_1588895_-	3-deoxy-D-manno-octulosonate 8-phosphate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	36.0	1.7e-38
VEI56226.1|1588909_1589713_-	putative transcriptional regulator	NA	NA	NA	NA	NA
VEI56228.1|1589712_1590591_-	N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2	NA	NA	NA	NA	NA
VEI56230.1|1590590_1591031_-	RDD family	NA	NA	NA	NA	NA
VEI56232.1|1591088_1592174_-	peptide chain release factor RF-1	NA	W8EDB3	Pseudomonas_phage	42.2	1.3e-08
VEI56234.1|1592449_1593001_-	Putative TPR repeat protein	NA	NA	NA	NA	NA
VEI56236.1|1593012_1593189_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56238.1|1593188_1593848_-	Putative TPR repeat protein	NA	NA	NA	NA	NA
VEI56240.1|1593859_1594036_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56242.1|1594035_1594482_-	Putative TPR repeat protein	NA	NA	NA	NA	NA
VEI56244.1|1594682_1595219_-	Protein of uncharacterised function, DUF462	NA	NA	NA	NA	NA
VEI56245.1|1595480_1596188_-	Uncharacterised protein	NA	A0A0M3LSH7	Mannheimia_phage	55.6	1.4e-62
VEI56247.1|1596199_1596571_-	Mu-like prophage protein gp29	NA	B7SDN1	Haemophilus_phage	78.0	3.8e-48
VEI56249.1|1596615_1596774_+	Uncharacterised protein	NA	A0A0M3LTD8	Mannheimia_phage	83.7	2.0e-14
VEI56251.1|1596833_1597451_-|integrase	putative integrase/recombinase	integrase	Q19US1	Mannheimia_phage	60.6	1.2e-62
VEI56252.1|1597517_1597835_-|integrase	integrase	integrase	A0A0M3LRG1	Mannheimia_phage	58.1	3.2e-27
VEI56254.1|1598311_1599076_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56256.1|1599079_1599607_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56258.1|1599616_1600789_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56260.1|1600772_1601183_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56262.1|1601196_1602018_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56264.1|1602071_1602536_-	Uncharacterised protein	NA	F6MIM0	Haemophilus_phage	56.3	2.2e-45
VEI56265.1|1602532_1603135_-	Uncharacterised protein	NA	Q94MX9	Haemophilus_virus	92.5	9.5e-97
VEI56267.1|1603146_1605495_-|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	67.2	5.5e-249
VEI56269.1|1605491_1606118_-	Protein of uncharacterised function (DUF2612)	NA	A0A0N9SSD8	Pseudomonas_phage	36.9	4.0e-21
VEI56271.1|1606126_1607563_-	Uncharacterized homolog of phage Mu protein gp47	NA	A0A0N9SH53	Pseudomonas_phage	28.4	2.2e-46
VEI56273.1|1607555_1607921_-	Uncharacterised protein	NA	A0A1J0MEY0	Pectobacterium_phage	34.5	1.8e-10
VEI56275.1|1607917_1608589_-|plate	phage baseplate assembly protein V	plate	A0A0M5M1K7	Salmonella_phage	33.5	5.8e-18
VEI56277.1|1608591_1609548_-	Uncharacterised protein	NA	M4SNA5	Psychrobacter_phage	29.5	4.6e-21
VEI56279.1|1609544_1609859_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56281.1|1609855_1610437_-	Uncharacterised protein	NA	I3PGV3	Xanthomonas_phage	27.5	2.0e-06
VEI56283.1|1610527_1612858_-|tail	phage-like minor tail protein	tail	K7RVL7	Vibrio_phage	28.6	2.8e-35
VEI56285.1|1612854_1613007_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56287.1|1613042_1613525_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56289.1|1613524_1613950_-	Uncharacterised protein	NA	A0A0A1IUI2	Pseudomonas_phage	36.9	2.6e-16
VEI56291.1|1613995_1615075_-	phage-like protein	NA	A0A0N9SJA3	Pseudomonas_phage	46.7	8.3e-59
VEI56293.1|1615055_1615565_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56295.1|1615566_1615926_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56297.1|1615925_1616384_-	Mu-like prophage protein gpG	NA	A0A2I7R754	Vibrio_phage	34.5	5.3e-15
VEI56299.1|1616376_1616727_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56301.1|1616730_1616919_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56303.1|1616921_1617869_-	Uncharacterized protein conserved in bacteria	NA	A0A0N9SG07	Pseudomonas_phage	36.6	2.8e-50
VEI56305.1|1617930_1618350_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56307.1|1618360_1619434_-	Uncharacterized protein conserved in bacteria	NA	E5AGA6	Erwinia_phage	40.2	9.4e-55
VEI56309.1|1619559_1620819_-	phage Mu protein gp30-like protein	NA	E5AGA5	Erwinia_phage	31.2	1.8e-25
VEI56311.1|1620757_1622074_-	phage-associated protein, HI1409 family	NA	A0A2K9V3H1	Faecalibacterium_phage	32.0	1.8e-47
VEI56313.1|1622075_1623470_-|terminase	phage terminase large subunit	terminase	A0A220NQL3	Acinetobacter_phage	52.9	5.2e-122
VEI56315.1|1623414_1623933_-|terminase	Probable bacteriophage terminase, small subunit	terminase	A0A1X9SFE5	Acinetobacter_phage	39.2	2.1e-20
VEI56317.1|1624010_1624262_+	bacteriophage protein/plasmid stabilization system protein	NA	A0A1S5NR91	Burkholderia_phage	52.9	9.9e-16
VEI56319.1|1624245_1624593_+	transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	57.0	5.2e-23
VEI56321.1|1624787_1625111_-	putative bacteriophage protein	NA	Q7Y5U9	Haemophilus_phage	56.1	9.2e-22
VEI56323.1|1625103_1625706_-	Putative phage lysozyme	NA	Q7Y5V0	Haemophilus_phage	55.4	3.9e-58
VEI56325.1|1625671_1626031_-|holin	Putative bacteriophage holin protein	holin	NA	NA	NA	NA
VEI56327.1|1626209_1626722_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56329.1|1626950_1627721_-	phage repressor	NA	Q76H56	Enterobacteria_phage	26.3	1.1e-15
VEI56331.1|1627846_1628053_+	phage transcriptional regulatory protein/antirepressor Cro	NA	NA	NA	NA	NA
VEI56333.1|1628096_1628549_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56335.1|1628595_1629270_+	Probable phage repressor protein	NA	D0UIL6	Aggregatibacter_phage	55.6	5.0e-62
VEI56337.1|1629266_1630025_+	Uncharacterised protein	NA	D0UIL5	Aggregatibacter_phage	68.3	3.6e-61
VEI56339.1|1630009_1630645_+	phage replication protein	NA	NA	NA	NA	NA
VEI56341.1|1630641_1631208_+	Transcriptional activator, adenine-specific DNA methyltransferase	NA	A0A0M3LPV8	Mannheimia_phage	78.3	1.9e-83
VEI56343.1|1631282_1631702_+	recombination protein NinB	NA	Q7Y5V7	Haemophilus_phage	84.8	2.8e-63
VEI56345.1|1631698_1631791_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56347.1|1631790_1632378_+	ning recombination protein	NA	A0A2I7RAC0	Vibrio_phage	48.5	3.7e-37
VEI56349.1|1632379_1632745_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
VEI56351.1|1632867_1633668_+|tRNA	tRNA_anti-like	tRNA	NA	NA	NA	NA
VEI56353.1|1633678_1634827_+	Uncharacterized conserved protein	NA	A0A1S5SAB0	Streptococcus_phage	36.2	1.7e-30
VEI56355.1|1634977_1635163_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56357.1|1635547_1635859_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56359.1|1635978_1636230_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56361.1|1636219_1637251_+	phage antirepressor protein	NA	D0UIK6	Aggregatibacter_phage	79.8	4.1e-39
VEI56363.1|1637338_1637683_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56365.1|1637679_1637973_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56367.1|1637986_1638892_+	phage-like endonuclease protein	NA	A0A0M3LR66	Mannheimia_phage	46.8	3.4e-58
VEI56369.1|1638893_1639676_+	phage recombination protein Bet	NA	A0A0M3LR26	Mannheimia_phage	61.9	1.0e-87
VEI56371.1|1639669_1640287_+	putative bacteriophage exonuclease	NA	A0A0M3LPU0	Mannheimia_phage	76.2	1.7e-88
VEI56373.1|1640289_1640433_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56375.1|1640441_1640882_+	ssDNA-binding protein	NA	F8TUL2	EBPR_podovirus	53.3	5.1e-39
VEI56377.1|1640983_1641553_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56379.1|1641549_1641786_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56381.1|1641782_1642142_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56383.1|1642138_1642927_+	C5 methylase	NA	U4KJA1	Streptococcus_phage	57.1	3.1e-79
VEI56385.1|1642937_1643420_+	Protein of uncharacterised function (DUF551)	NA	A0A0M3LS47	Mannheimia_phage	46.1	1.5e-31
VEI56387.1|1643423_1643711_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEI56389.1|1643837_1644038_+	Predicted transcriptional regulator	NA	NA	NA	NA	NA
VEI56391.1|1644034_1645282_-|integrase	prophage CP4-57-like integrase	integrase	A0A1V0E8G8	Vibrio_phage	37.7	4.3e-75
1654703:1654722	attR	AAAGTGCGGTCAAATTTTCC	NA	NA	NA	NA
>prophage 5
LR134490	Haemophilus influenzae strain NCTC11873 genome assembly, chromosome: 1	1948880	1753087	1761601	1948880		Bacillus_virus(33.33%)	8	NA	NA
VEI56590.1|1753087_1753771_+	7-cyano-7-deazaguanine synthase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	50.2	6.6e-54
VEI56592.1|1753763_1754189_+	6-pyruvoyl-tetrahydropterin synthase	NA	A0A1U9WRB3	Streptococcus_virus	42.7	7.8e-21
VEI56594.1|1754195_1754825_+	organic radical activating protein	NA	A0A218M2Y8	Acidovorax_phage	35.2	2.9e-11
VEI56599.1|1755436_1757620_+	DNA-dependent ATPase I and helicase II	NA	A7KV33	Bacillus_phage	37.6	1.9e-115
VEI56601.1|1757709_1758711_+	dipeptide transporter	NA	NA	NA	NA	NA
VEI56603.1|1758725_1759613_+	dipeptide transporter	NA	NA	NA	NA	NA
VEI56605.1|1759622_1760615_+	dipeptide transporter	NA	G3M9Y6	Bacillus_virus	30.8	2.0e-14
VEI56607.1|1760617_1761601_+	dipeptide transporter	NA	G3M9Y6	Bacillus_virus	26.8	9.3e-17
