assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900638145.1_56433_F01	LR134492	Serratia fonticola strain NCTC13193 genome assembly, chromosome: 1	1	1027046-1027146	1	CRISPRCasFinder	no		RT,DEDDh,csa3,cas14j,DinG,cas3,WYL,PD-DExK	Orphan	CGATAAACTCAGCAAACTCGATCG	24	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,csa3,cas14j,DinG,cas3,WYL,PD-DExK	NA,NA	NA|223aa|up_9|LR134492.1_1017586_1018255_+	PRK15195, PRK15195, molecular chaperone FimC	NA|880aa|up_8|LR134492.1_1018337_1020977_+	PRK15193, PRK15193, outer membrane usher protein; Provisional	NA|176aa|up_7|LR134492.1_1020999_1021527_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|169aa|up_6|LR134492.1_1021542_1022049_+	PRK15293, PRK15293, fimbrial protein SthD	NA|306aa|up_5|LR134492.1_1022062_1022980_+	pfam09160, FimH_man-bind, FimH, mannose binding	NA|222aa|up_4|LR134492.1_1023046_1023712_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|205aa|up_3|LR134492.1_1023708_1024323_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|192aa|up_2|LR134492.1_1024434_1025010_-	PRK09871, PRK09871, tyrosine recombinase; Provisional	NA|84aa|up_1|LR134492.1_1025438_1025690_+	pfam06183, DinI, DinI-like family	NA|381aa|up_0|LR134492.1_1025764_1026907_-	pfam00665, rve, Integrase core domain	NA|130aa|down_0|LR134492.1_1027571_1027961_+	pfam09851, SHOCT, Short C-terminal domain	NA|273aa|down_1|LR134492.1_1028106_1028925_-	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|127aa|down_2|LR134492.1_1029646_1030027_+	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|182aa|down_3|LR134492.1_1030145_1030691_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|234aa|down_4|LR134492.1_1030744_1031446_+	PRK09926, PRK09926, fimbrial chaperone	NA|883aa|down_5|LR134492.1_1031520_1034169_+	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|399aa|down_6|LR134492.1_1034232_1035429_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|193aa|down_7|LR134492.1_1035552_1036131_+	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins	NA|485aa|down_8|LR134492.1_1036176_1037631_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|156aa|down_9|LR134492.1_1037780_1038248_-	COG3133, SlyB, Outer membrane lipoprotein [Cell envelope biogenesis, outer membrane]
GCA_900638145.1_56433_F01	LR134492	Serratia fonticola strain NCTC13193 genome assembly, chromosome: 1	2	2325081-2325244	2	CRISPRCasFinder	no		RT,DEDDh,csa3,cas14j,DinG,cas3,WYL,PD-DExK	Orphan	TATTACACATAGAAATCAGCGAACTCGATCGGTCCCCACAGGGAGAGGGAGCTG	54	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,csa3,cas14j,DinG,cas3,WYL,PD-DExK	NA|76aa|up_9|LR134492.1_2316998_2317226_-,NA|59aa|up_6|LR134492.1_2318170_2318347_+,NA	NA|76aa|up_9|LR134492.1_2316998_2317226_-	NA	NA|75aa|up_8|LR134492.1_2317222_2317447_-	pfam08845, SymE_toxin, Toxin SymE, type I toxin-antitoxin system	NA|122aa|up_7|LR134492.1_2317523_2317889_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|59aa|up_6|LR134492.1_2318170_2318347_+	NA	NA|93aa|up_5|LR134492.1_2318343_2318622_+	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription]	NA|104aa|up_4|LR134492.1_2318621_2318933_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|618aa|up_3|LR134492.1_2319007_2320861_-	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|396aa|up_2|LR134492.1_2321239_2322427_+	PRK07200, PRK07200, aspartate/ornithine carbamoyltransferase family protein; Validated	NA|398aa|up_1|LR134492.1_2322500_2323694_+	TIGR03528, 2_3_DAP_am_ly, diaminopropionate ammonia-lyase	NA|406aa|up_0|LR134492.1_2323763_2324981_+	PRK13004, PRK13004, YgeY family selenium metabolism-linked hydrolase	NA|467aa|down_0|LR134492.1_2325466_2326867_+	PRK08323, PRK08323, phenylhydantoinase; Validated	NA|80aa|down_1|LR134492.1_2327052_2327292_+	PRK12353, PRK12353, putative amino acid kinase; Reviewed	NA|241aa|down_2|LR134492.1_2327261_2327984_+	PRK12353, PRK12353, putative amino acid kinase; Reviewed	NA|530aa|down_3|LR134492.1_2328047_2329637_-	TIGR03309, matur_yqeB, selenium-dependent molybdenum hydroxylase system protein, YqeB family	NA|259aa|down_4|LR134492.1_2329665_2330442_-	TIGR03172, Uncharacterized_protein_YqeC, probable selenium-dependent hydroxylase accessory protein YqeC	NA|1036aa|down_5|LR134492.1_2330910_2334018_+	PRK09853, PRK09853, putative selenate reductase subunit YgfK; Provisional	NA|443aa|down_6|LR134492.1_2334020_2335349_+	PRK07203, PRK07203, putative aminohydrolase SsnA	NA|258aa|down_7|LR134492.1_2335403_2336177_+	PRK09799, PRK09799, putative oxidoreductase; Provisional	NA|695aa|down_8|LR134492.1_2336173_2338258_+	PRK09800, PRK09800, putative hypoxanthine oxidase; Provisional	NA|266aa|down_9|LR134492.1_2338257_2339055_+	PRK09800, PRK09800, putative hypoxanthine oxidase; Provisional
GCA_900638145.1_56433_F01	LR134492	Serratia fonticola strain NCTC13193 genome assembly, chromosome: 1	3	2365438-2365537	3	CRISPRCasFinder	no		RT,DEDDh,csa3,cas14j,DinG,cas3,WYL,PD-DExK	Orphan	GGCACCGAATCAGCTCCCTCTCC	23	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,csa3,cas14j,DinG,cas3,WYL,PD-DExK	NA,NA|74aa|down_2|LR134492.1_2368798_2369020_+,NA|328aa|down_3|LR134492.1_2369016_2370000_+,NA|250aa|down_4|LR134492.1_2370058_2370808_+	NA|337aa|up_9|LR134492.1_2356722_2357733_+	PRK10882, PRK10882, hydrogenase 2 operon protein HybA	NA|400aa|up_8|LR134492.1_2357719_2358919_+	PRK10881, PRK10881, Ni/Fe-hydrogenase cytochrome b subunit	NA|565aa|up_7|LR134492.1_2358896_2360591_+	PRK10467, PRK10467, hydrogenase 2 large subunit; Provisional	NA|167aa|up_6|LR134492.1_2360590_2361091_+	PRK10466, hybD, HyaD/HybD family hydrogenase maturation endopeptidase	NA|162aa|up_5|LR134492.1_2361074_2361560_+	PRK10465, PRK10465, hydrogenase-2 assembly chaperone	NA|114aa|up_4|LR134492.1_2361560_2361902_+	PRK12380, PRK12380, hydrogenase/urease nickel incorporation protein	NA|322aa|up_3|LR134492.1_2361921_2362887_+	PRK10463, PRK10463, hydrogenase nickel incorporation protein HypB; Provisional	NA|92aa|up_2|LR134492.1_2362886_2363162_+	PRK10413, PRK10413, hydrogenase maturation factor HybG	NA|372aa|up_1|LR134492.1_2363148_2364264_+	PRK15062, PRK15062, hydrogenase isoenzymes formation protein HypD; Provisional	NA|343aa|up_0|LR134492.1_2364263_2365292_+	cd02197, HypE, HypE (Hydrogenase expression/formation protein)	NA|725aa|down_0|LR134492.1_2365592_2367767_+	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	NA|197aa|down_1|LR134492.1_2367987_2368578_+	pfam04955, HupE_UreJ, HupE / UreJ protein	NA|74aa|down_2|LR134492.1_2368798_2369020_+	NA	NA|328aa|down_3|LR134492.1_2369016_2370000_+	NA	NA|250aa|down_4|LR134492.1_2370058_2370808_+	NA	NA|200aa|down_5|LR134492.1_2370999_2371599_-	PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional	NA|158aa|down_6|LR134492.1_2371598_2372072_-	PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional	NA|319aa|down_7|LR134492.1_2372645_2373602_+	PRK01209, cobD, cobalamin biosynthesis protein	NA|190aa|down_8|LR134492.1_2373651_2374221_+	PRK00784, PRK00784, cobyric acid synthase	NA|325aa|down_9|LR134492.1_2374217_2375192_+	PRK00784, PRK00784, cobyric acid synthase
GCA_900638145.1_56433_F01	LR134492	Serratia fonticola strain NCTC13193 genome assembly, chromosome: 1	4	4758868-4758974	4	CRISPRCasFinder	no		RT,DEDDh,csa3,cas14j,DinG,cas3,WYL,PD-DExK	Orphan	CGTGCCACAGATGGGCTTCTGCGCC	25	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,csa3,cas14j,DinG,cas3,WYL,PD-DExK	NA|46aa|up_9|LR134492.1_4751359_4751497_-,NA|91aa|up_6|LR134492.1_4753377_4753650_-,NA|134aa|up_4|LR134492.1_4754972_4755374_+,NA|50aa|up_3|LR134492.1_4755503_4755653_-,NA|58aa|down_1|LR134492.1_4759971_4760145_-	NA|46aa|up_9|LR134492.1_4751359_4751497_-	NA	NA|224aa|up_8|LR134492.1_4751554_4752226_-	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|174aa|up_7|LR134492.1_4752505_4753027_-	PRK15289, lpfA, fimbrial protein; Provisional	NA|91aa|up_6|LR134492.1_4753377_4753650_-	NA	NA|267aa|up_5|LR134492.1_4754165_4754966_+	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators	NA|134aa|up_4|LR134492.1_4754972_4755374_+	NA	NA|50aa|up_3|LR134492.1_4755503_4755653_-	NA	NA|313aa|up_2|LR134492.1_4755823_4756762_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|31aa|up_1|LR134492.1_4756812_4756905_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|590aa|up_0|LR134492.1_4756897_4758667_-	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|259aa|down_0|LR134492.1_4759061_4759838_-	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|58aa|down_1|LR134492.1_4759971_4760145_-	NA	NA|665aa|down_2|LR134492.1_4760396_4762391_-	PRK12753, PRK12753, transketolase; Reviewed	NA|95aa|down_3|LR134492.1_4762617_4762902_+	cd07334, M48C_loiP_like, Peptidase M48C Ste24p loiP-like, integral membrane protein	NA|157aa|down_4|LR134492.1_4762898_4763369_+	cd07334, M48C_loiP_like, Peptidase M48C Ste24p loiP-like, integral membrane protein	NA|546aa|down_5|LR134492.1_4763423_4765061_-	PRK07064, PRK07064, thiamine pyrophosphate-binding protein	NA|490aa|down_6|LR134492.1_4765235_4766705_-	cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like	NA|265aa|down_7|LR134492.1_4766721_4767516_-	PRK13303, PRK13303, aspartate dehydrogenase	NA|265aa|down_8|LR134492.1_4767529_4768324_-	PRK07062, PRK07062, SDR family oxidoreductase	NA|273aa|down_9|LR134492.1_4768320_4769139_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
GCA_900638145.1_56433_F01	LR134492	Serratia fonticola strain NCTC13193 genome assembly, chromosome: 1	5	5090715-5090850	5	CRISPRCasFinder	no		RT,DEDDh,csa3,cas14j,DinG,cas3,WYL,PD-DExK	Orphan	ACAGGGAGAGGGAGCTGATAGCCTCTGCTCTGTTGGAAG	39	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,csa3,cas14j,DinG,cas3,WYL,PD-DExK	NA,NA|150aa|down_5|LR134492.1_5097282_5097732_+	NA|173aa|up_9|LR134492.1_5081469_5081988_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|218aa|up_8|LR134492.1_5081978_5082632_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|126aa|up_7|LR134492.1_5082709_5083087_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|545aa|up_6|LR134492.1_5083498_5085133_+	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain	NA|142aa|up_5|LR134492.1_5085093_5085519_+	TIGR03997, NADH:flavin_oxidoreductase, mycofactocin system FadH/OYE family oxidoreductase 2	NA|380aa|up_4|LR134492.1_5085558_5086698_-	PRK15001, PRK15001, 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG	NA|169aa|up_3|LR134492.1_5086847_5087354_+	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only]	NA|327aa|up_2|LR134492.1_5087443_5088424_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|246aa|up_1|LR134492.1_5088425_5089163_+	PRK09065, PRK09065, glutamine amidotransferase; Provisional	NA|412aa|up_0|LR134492.1_5089454_5090690_+	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional	NA|203aa|down_0|LR134492.1_5090897_5091506_-	pfam10688, Imp-YgjV, Bacterial inner membrane protein	NA|497aa|down_1|LR134492.1_5091582_5093073_-	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus	NA|471aa|down_2|LR134492.1_5093093_5094506_-	pfam02614, UxaC, Glucuronate isomerase	NA|433aa|down_3|LR134492.1_5094902_5096201_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|259aa|down_4|LR134492.1_5096318_5097095_+	PRK11523, PRK11523, transcriptional regulator ExuR	NA|150aa|down_5|LR134492.1_5097282_5097732_+	NA	NA|225aa|down_6|LR134492.1_5097864_5098539_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|125aa|down_7|LR134492.1_5098535_5098910_+	PRK10629, PRK10629, EnvZ/OmpR regulon moderator MzrA	NA|124aa|down_8|LR134492.1_5099123_5099495_+	pfam06476, DUF1090, Protein of unknown function (DUF1090)	NA|102aa|down_9|LR134492.1_5099659_5099965_+	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
