The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR134520	Streptococcus agalactiae strain NCTC13947 genome assembly, chromosome: 1	2095190	55503	62707	2095190	protease	Streptococcus_phage(16.67%)	8	NA	NA
VEJ26788.1|55503_56748_+|protease	FIG001621: Zinc protease	protease	A0A1X9I714	Streptococcus_phage	41.5	1.7e-87
VEJ26789.1|56749_58033_+	FIG009210: peptidase, M16 family	NA	A0A2H4UVM3	Bodo_saltans_virus	23.6	1.6e-05
VEJ26790.1|58134_58698_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
VEJ26791.1|58697_59537_+	ATPase component of general energizing module of ECF transporters	NA	G9BWD6	Planktothrix_phage	30.0	3.5e-20
VEJ26792.1|59512_60355_+	ATPase component of general energizing module of ECF transporters	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	2.0e-15
VEJ26793.1|60347_61142_+	Transmembrane component of general energizing module of ECF transporters	NA	NA	NA	NA	NA
VEJ26794.1|61357_61897_+	Aggregation promoting factor	NA	A0A249XZV3	Enterococcus_phage	46.4	3.0e-17
VEJ26795.1|62002_62707_+	immunodominant antigen A	NA	A0A2H4J6C5	uncultured_Caudovirales_phage	56.6	3.2e-27
>prophage 2
LR134520	Streptococcus agalactiae strain NCTC13947 genome assembly, chromosome: 1	2095190	71027	87764	2095190		Streptococcus_phage(68.75%)	24	NA	NA
VEJ26803.1|71027_72383_+	Replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	62.6	1.2e-152
VEJ26804.1|72394_72682_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
VEJ26805.1|73011_73623_+	30S ribosomal protein S4	NA	NA	NA	NA	NA
VEJ26806.1|73731_74802_-	Integrase/recombinase, phage associated	NA	A0A1X9I5Y5	Streptococcus_phage	69.8	5.6e-140
VEJ26807.1|75141_76107_-	Protein of uncharacterised function (DUF3644)	NA	A0A0N9RUA4	Staphylococcus_phage	50.8	4.6e-85
VEJ26808.1|76626_76836_-	phage super infection exclusion	NA	NA	NA	NA	NA
VEJ26809.1|77016_77847_-	KilA domain-containing protein	NA	Q4ZC41	Staphylococcus_virus	55.7	2.2e-80
VEJ26810.1|77926_78469_-	XRE family transcriptional regulator	NA	A0A1X9I723	Streptococcus_phage	65.8	1.6e-18
VEJ26811.1|78680_78869_+	phage protein	NA	A0A1X9I5U7	Streptococcus_phage	43.5	1.4e-06
VEJ26812.1|78884_79493_+	Phage antirepressor protein	NA	A0A1W6JPC3	Staphylococcus_phage	47.4	6.1e-43
VEJ26813.1|79513_79921_+	phage protein	NA	A0A1X9I5V7	Streptococcus_phage	69.4	1.3e-49
VEJ26814.1|79933_80551_+	pRha family phage regulatory protein	NA	A0A192Y918	Salmonella_phage	34.7	1.5e-09
VEJ26815.1|80799_80973_+	phage protein	NA	NA	NA	NA	NA
VEJ26816.1|81113_81566_+	phage protein	NA	A0A1X9I5V7	Streptococcus_phage	34.4	2.0e-06
VEJ26817.1|81654_81987_+	phage protein	NA	NA	NA	NA	NA
VEJ26818.1|81983_82178_+	phage protein	NA	NA	NA	NA	NA
VEJ26819.1|82189_82519_+	phage protein	NA	NA	NA	NA	NA
VEJ26820.1|82521_82794_+	Uncharacterised protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	6.1e-19
VEJ26821.1|82794_83652_+	replication protein	NA	A0A1X9I6L2	Streptococcus_phage	74.8	2.9e-123
VEJ26822.1|83671_85174_+	phage replication protein	NA	Q9AZI5	Lactococcus_phage	37.2	2.0e-63
VEJ26823.1|85538_86084_+	Uncharacterised protein	NA	A0A1X9I5U4	Streptococcus_phage	57.9	4.2e-27
VEJ26824.1|86157_86646_+	Uncharacterised protein	NA	A0A1X9I5V2	Streptococcus_phage	58.0	9.2e-50
VEJ26825.1|87049_87412_+	phage protein	NA	NA	NA	NA	NA
VEJ26826.1|87386_87764_+	Phage encoded transcriptional regulator, ArpU family	NA	Q7Y4J3	Streptococcus_phage	37.9	3.2e-10
>prophage 3
LR134520	Streptococcus agalactiae strain NCTC13947 genome assembly, chromosome: 1	2095190	599808	610542	2095190		Streptococcus_phage(84.62%)	14	NA	NA
VEJ27349.1|599808_600573_+	Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	2.6e-14
VEJ27350.1|600572_601283_+	ABC transporter ATP-binding protein; Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)	NA	G9BWD6	Planktothrix_phage	28.1	4.7e-18
VEJ27351.1|601301_601961_+	Acetoin utilization acuB protein	NA	M1NSC5	Streptococcus_phage	56.5	4.7e-65
VEJ27352.1|602049_602685_+	Thymidylate kinase	NA	M1PSC7	Streptococcus_phage	60.1	1.4e-66
VEJ27353.1|602704_603568_+	DNA polymerase III delta prime subunit	NA	M1NSC1	Streptococcus_phage	50.0	2.5e-74
VEJ27354.1|603598_603925_+	DNA replication intiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.1	3.2e-30
VEJ27355.1|603930_604794_+	rRNA small subunit methyltransferase I	NA	M1PLC5	Streptococcus_phage	70.7	3.7e-110
VEJ27356.1|605063_605699_-	Cytoplasmic copper homeostasis protein CutC	NA	NA	NA	NA	NA
VEJ27357.1|605831_606923_+	Phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	78.0	3.9e-165
VEJ27358.1|606990_607539_+	Acetyltransferase	NA	M1PSC3	Streptococcus_phage	58.4	1.1e-54
VEJ27359.1|607601_608783_+	D-3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	75.3	1.1e-168
VEJ27360.1|608839_609316_+	Methylated-DNA--protein-cysteine methyltransferase	NA	M1PFU9	Streptococcus_phage	50.9	7.1e-39
VEJ27361.1|609317_609674_+	Arsenate reductase	NA	M1PLC0	Streptococcus_phage	72.6	5.2e-42
VEJ27362.1|609714_610542_-	Exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.4	5.1e-125
>prophage 4
LR134520	Streptococcus agalactiae strain NCTC13947 genome assembly, chromosome: 1	2095190	1481917	1524900	2095190	tail,protease,terminase,lysis,capsid,head,portal	Streptococcus_phage(97.37%)	43	NA	NA
VEJ28184.1|1481917_1483423_-	serine/threonine protein kinase	NA	A0A0G2YBE6	Acanthamoeba_polyphaga_mimivirus	25.1	3.8e-09
VEJ28185.1|1483436_1484210_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28186.1|1484279_1485566_-	prophage LambdaSa04, site-specific recombinase resolvase	NA	E4ZFN9	Streptococcus_phage	79.8	1.6e-194
VEJ28187.1|1485528_1486770_-	Recombinase	NA	A0A1X9I6J1	Streptococcus_phage	69.5	1.2e-170
VEJ28188.1|1487550_1488957_-	Phage-associated cell wall hydrolase	NA	A0A1B0RXL4	Streptococcus_phage	63.4	3.7e-107
VEJ28189.1|1488958_1489357_-|lysis	Holin, toxin secretion/phage lysis	lysis	D0R0E9	Streptococcus_phage	60.8	5.1e-38
VEJ28190.1|1489374_1491231_-	Phage structural protein	NA	Q6DMS9	Streptococcus_phage	73.3	2.7e-259
VEJ28191.1|1491243_1494159_-	prophage minor structural protein	NA	Q6DMT0	Streptococcus_phage	64.6	0.0e+00
VEJ28192.1|1494158_1494884_-	Uncharacterised protein	NA	Q6DMT1	Streptococcus_phage	58.8	2.1e-82
VEJ28193.1|1494880_1498000_-|tail	Phage tail length tape-measure protein	tail	Q6DMT2	Streptococcus_phage	78.0	3.5e-259
VEJ28194.1|1498294_1498714_-	prophage pi2 protein 40	NA	A0A1X9I691	Streptococcus_phage	75.5	2.8e-55
VEJ28195.1|1498725_1499295_-	Prophage pi2 protein 39	NA	E4ZFM9	Streptococcus_phage	97.3	5.1e-100
VEJ28196.1|1499297_1499624_-	prophage pi2 protein 38	NA	M1Q1Z4	Streptococcus_phage	67.6	5.4e-38
VEJ28197.1|1499632_1500001_-	prophage pi2 protein 37	NA	Q6DMT7	Streptococcus_phage	62.1	9.1e-34
VEJ28198.1|1499993_1500332_-|head,tail	Bacteriophage head-tail adaptor	head,tail	A0A1B0RXE4	Streptococcus_phage	69.6	1.2e-37
VEJ28199.1|1500331_1500589_-	uncharacterised phage protein	NA	D0R0D7	Streptococcus_phage	78.8	4.3e-30
VEJ28200.1|1500585_1501794_-|capsid	Phage major capsid protein	capsid	E4ZFM5	Streptococcus_phage	91.3	6.8e-211
VEJ28201.1|1501807_1502506_-|protease	Prophage Clp protease-like protein	protease	A0A1B0RXE1	Streptococcus_phage	83.2	1.7e-105
VEJ28202.1|1502498_1503788_-|portal	prophage LambdaSa04, HK97 family portal protein	portal	E4ZFM3	Streptococcus_phage	91.0	2.0e-229
VEJ28203.1|1503868_1504141_-	cytoplasmic protein	NA	E4ZFM1	Streptococcus_phage	78.0	4.1e-07
VEJ28204.1|1504157_1504463_-	prophage LambdaSa04, RelE/ParE family protein	NA	NA	NA	NA	NA
VEJ28205.1|1504462_1504765_-	Plasmid stabilization system antitoxin protein	NA	NA	NA	NA	NA
VEJ28206.1|1504820_1506413_-|terminase	Phage terminase large subunit	terminase	A0A1B0RXJ8	Streptococcus_phage	95.3	1.6e-305
VEJ28207.1|1506409_1506679_-|terminase	phage terminase, small subunit	terminase	E4ZFL9	Streptococcus_phage	97.8	2.4e-44
VEJ28208.1|1506919_1507369_-	Uncharacterised protein	NA	E4ZFL7	Streptococcus_phage	65.2	2.1e-16
VEJ28209.1|1507379_1507634_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28210.1|1507711_1508965_-	DNA methylase	NA	M1NSK8	Streptococcus_phage	93.8	2.5e-232
VEJ28211.1|1508961_1510218_-	Adenine-specific methyltransferase	NA	A0A1B0RXE5	Streptococcus_phage	90.7	7.5e-221
VEJ28212.1|1510189_1510645_-	zinc-finger protein	NA	A0A1B0RXC6	Streptococcus_phage	50.3	3.5e-43
VEJ28213.1|1511299_1512337_-	S-adenosylmethionine synthetase	NA	E4ZFL0	Streptococcus_phage	84.9	2.2e-170
VEJ28214.1|1512729_1513227_-	uncharacterised phage protein	NA	A0A1B0RXB9	Streptococcus_phage	75.0	4.3e-63
VEJ28215.1|1513219_1514596_-	DNA helicase, phage-associated	NA	A0A1X9I6B0	Streptococcus_phage	86.2	5.2e-231
VEJ28216.1|1514576_1514858_-	Phage protein	NA	M1PFY8	Streptococcus_phage	79.6	7.9e-38
VEJ28217.1|1515141_1517427_-	prophage LambdaSa04, DNA primase	NA	E4ZFK6	Streptococcus_phage	79.2	0.0e+00
VEJ28218.1|1517714_1517849_+	Uncharacterised protein	NA	Q6DMW0	Streptococcus_phage	86.4	2.1e-12
VEJ28219.1|1517823_1518147_+	Uncharacterised protein	NA	A0A1B0RXB7	Streptococcus_phage	71.2	2.0e-32
VEJ28220.1|1518139_1519261_+	Phage protein	NA	A0A1X9I6D8	Streptococcus_phage	88.2	6.1e-198
VEJ28221.1|1519265_1519829_+	Phage protein	NA	A0A1B0RXA9	Streptococcus_phage	92.3	1.8e-89
VEJ28222.1|1519845_1520010_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28223.1|1520059_1522015_+	FIG006036: phage encoded DNA polymerase I	NA	D0R0B0	Streptococcus_phage	84.3	0.0e+00
VEJ28224.1|1522053_1522458_-	Uncharacterised protein	NA	M1Q222	Streptococcus_phage	79.9	7.6e-58
VEJ28225.1|1522454_1522622_-	Uncharacterised protein	NA	A0A1B0RXB3	Streptococcus_phage	80.0	3.0e-16
VEJ28226.1|1523031_1524900_-	Domain of uncharacterised function (DUF955)	NA	E4ZFJ9	Streptococcus_phage	80.9	9.9e-302
>prophage 5
LR134520	Streptococcus agalactiae strain NCTC13947 genome assembly, chromosome: 1	2095190	1864692	1915818	2095190	integrase,tRNA,holin	Streptococcus_phage(25.0%)	59	1881081:1881102	1904846:1904867
VEJ28541.1|1864692_1865838_+|holin	Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA	holin	F2Y1V5	Organic_Lake_phycodnavirus	31.7	1.9e-13
VEJ28542.1|1865837_1866473_+|holin	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	holin	NA	NA	NA	NA
VEJ28543.1|1866475_1867402_+|holin	Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	holin	NA	NA	NA	NA
VEJ28544.1|1867402_1868053_+|holin	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD	holin	NA	NA	NA	NA
VEJ28545.1|1868114_1869296_-	MFS general substrate transporter	NA	NA	NA	NA	NA
VEJ28546.1|1869368_1870229_-	Positive transcriptional regulator, MutR family	NA	NA	NA	NA	NA
VEJ28547.1|1870228_1870354_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28548.1|1870350_1870440_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28549.1|1871071_1871353_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28550.1|1871386_1871773_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28551.1|1871757_1872438_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28552.1|1872410_1872971_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28553.1|1872970_1873306_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28554.1|1873479_1873770_-	virulence factor EsxA	NA	NA	NA	NA	NA
VEJ28555.1|1874276_1874564_+	DNA-damage-inducible protein J	NA	NA	NA	NA	NA
VEJ28556.1|1874553_1874889_+	Toxin to DNA-damage-inducible protein J	NA	NA	NA	NA	NA
VEJ28557.1|1875193_1875664_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28558.1|1875831_1877088_-	Mobilization protein MobM	NA	M1NXP9	Cellulophaga_phage	30.8	3.2e-14
VEJ28559.1|1877404_1877839_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28560.1|1877874_1878750_-	replication initiation factor family protein	NA	NA	NA	NA	NA
VEJ28561.1|1879049_1879691_-	Arsenate reductase and related proteins, glutaredoxin family	NA	NA	NA	NA	NA
VEJ28562.1|1879694_1880021_-	replication initiation factor	NA	NA	NA	NA	NA
VEJ28563.1|1880026_1880308_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28564.1|1880448_1880781_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28565.1|1880906_1881458_+	DNA-binding protein	NA	NA	NA	NA	NA
1881081:1881102	attL	TTATTAGGAGATGAAAAAGAGC	NA	NA	NA	NA
VEJ28566.1|1881526_1882681_+|integrase	site-specific recombinase, phage integrase family	integrase	A0A1S5S7K9	Streptococcus_phage	33.4	2.0e-47
VEJ28567.1|1883024_1883345_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28568.1|1883378_1883513_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28569.1|1883558_1883897_-	cadmium efflux system accessory protein	NA	E4ZFI8	Streptococcus_phage	32.4	3.8e-10
VEJ28570.1|1883908_1884523_-	cadmium resistance protein	NA	NA	NA	NA	NA
VEJ28571.1|1885229_1887299_-	copper-exporting ATPase	NA	A0A218MNH6	uncultured_virus	29.6	6.7e-57
VEJ28572.1|1887318_1887768_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA	NA
VEJ28573.1|1888016_1888409_-	SSU ribosomal protein S9p (S16e)	NA	NA	NA	NA	NA
VEJ28574.1|1888429_1888876_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
VEJ28575.1|1889756_1890617_-|tRNA	DegV family protein in cluster with TrmH family tRNA/rRNA methyltransferase YacO	tRNA	NA	NA	NA	NA
VEJ28576.1|1890709_1891228_-	Predicted RNA-binding protein containing a PIN domain	NA	NA	NA	NA	NA
VEJ28577.1|1891224_1891980_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
VEJ28578.1|1892082_1892469_-	COG1939: Ribonuclease III family protein	NA	NA	NA	NA	NA
VEJ28579.1|1892461_1893805_-|tRNA	Cysteinyl-tRNA synthetase	tRNA	A0A1V0SAQ2	Catovirus	31.2	2.9e-53
VEJ28580.1|1893801_1893984_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28581.1|1893993_1894578_-	serine acetyltransferase	NA	NA	NA	NA	NA
VEJ28582.1|1894586_1895339_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEJ28583.1|1895340_1897470_-	Polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
VEJ28584.1|1897850_1898120_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
VEJ28585.1|1898207_1899467_-	oxidoreductase, putative	NA	NA	NA	NA	NA
VEJ28586.1|1899575_1900505_-	Transketolase, C-terminal section	NA	NA	NA	NA	NA
VEJ28587.1|1900501_1901359_-	Transketolase, N-terminal section	NA	NA	NA	NA	NA
VEJ28588.1|1901361_1902717_-	Putative integral membrane protein	NA	NA	NA	NA	NA
VEJ28589.1|1902729_1903014_-	PTS system ascorbate-specific transporter subunits IICB	NA	NA	NA	NA	NA
VEJ28590.1|1903016_1905053_-	Predicted galactitol operon regulator (Transcriptional antiterminator), BglG family / PTS system,mannitol/fructose-specific IIA component	NA	NA	NA	NA	NA
1904846:1904867	attR	GCTCTTTTTCATCTCCTAATAA	NA	NA	NA	NA
VEJ28591.1|1905268_1906894_-	Trehalose-6-phosphate hydrolase	NA	NA	NA	NA	NA
VEJ28592.1|1907115_1909146_-	PTS system, trehalose-specific IIB component / PTS system, trehalose-specific IIC component/ PTS system, trehalose-specific IIA component	NA	NA	NA	NA	NA
VEJ28593.1|1909428_1910055_-	Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)	NA	G3M9Y6	Bacillus_virus	27.0	2.3e-16
VEJ28594.1|1910038_1910842_-	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	NA	A0A2R8FG22	Brazilian_cedratvirus	26.9	3.2e-07
VEJ28595.1|1910853_1911675_-	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	NA	NA	NA	NA	NA
VEJ28596.1|1911671_1912649_-	oligopeptide ABC transporter (permease)	NA	NA	NA	NA	NA
VEJ28597.1|1912761_1914390_-	Glutathione-binding protein gsiB	NA	NA	NA	NA	NA
VEJ28598.1|1914632_1915361_-	LrgA-associated membrane protein LrgB	NA	NA	NA	NA	NA
VEJ28599.1|1915362_1915818_-|holin	Antiholin-like protein LrgA	holin	NA	NA	NA	NA
>prophage 6
LR134520	Streptococcus agalactiae strain NCTC13947 genome assembly, chromosome: 1	2095190	2069504	2081569	2095190		Synechococcus_phage(28.57%)	8	NA	NA
VEJ28749.1|2069504_2070809_-	Group B streptococcal surface immunogenic protein	NA	A0A2D1GNZ3	Streptomyces_phage	40.5	3.7e-05
VEJ28750.1|2070955_2071855_-	peptidase, M23/M37 family	NA	A0A221J6U0	Arthrobacter_phage	45.0	1.2e-18
VEJ28751.1|2072047_2073595_-	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	NA	Q58MG4	Prochlorococcus_phage	49.2	3.9e-78
VEJ28752.1|2073614_2074367_-	acetyltransferase, GNAT family	NA	NA	NA	NA	NA
VEJ28753.1|2074389_2074938_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	1.4e-25
VEJ28754.1|2075105_2076128_-	phosphoribosylaminoimidazole synthetase	NA	R9TMC7	Synechococcus_phage	42.7	1.1e-63
VEJ28755.1|2076155_2077610_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	3.7e-54
VEJ28756.1|2077843_2081569_-	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.9	1.9e-38
