The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LR214997	Mycoplasma conjunctivae strain NCTC10147 genome assembly, chromosome: 1	899438	731342	741009	899438		Mycoplasma_phage(66.67%)	7	NA	NA
VEU66508.1|731342_733931_-	bifunctional preprotein translocase subunit SecD/SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	23.8	1.2e-07
VEU66509.1|734118_734937_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEU66510.1|734952_736212_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	48.6	2.4e-97
VEU66511.1|736316_738026_-	Uncharacterised protein	NA	Q6GZ00	Mycoplasma_phage	30.2	2.6e-46
VEU66512.1|738010_738835_-	spermidine/putrescine ABC transporter membrane protein	NA	Q6GZ01	Mycoplasma_phage	47.4	1.8e-61
VEU66513.1|738827_739685_-	polyamine (spermidine/putrescine) ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	51.1	1.0e-64
VEU66514.1|739671_741009_-	maltodextrin ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	55.6	2.0e-54
>prophage 1
LR215003	Mycoplasma conjunctivae strain NCTC10147 genome assembly, plasmid: 7	594555	18001	69535	594555	protease,tRNA,transposase	unidentified_phage(25.0%)	50	NA	NA
VEU66865.1|18001_19318_-|tRNA	tRNA (uracil-5-)-methyltransferase related enzyme	tRNA	A0A2K5B251	Erysipelothrix_phage	34.2	5.7e-62
VEU66866.1|19391_20441_-	Xaa-Pro aminopeptidase	NA	NA	NA	NA	NA
VEU66867.1|20473_21343_-	GTP-binding protein	NA	NA	NA	NA	NA
VEU66868.1|21342_21735_-	cytidine deaminase	NA	NA	NA	NA	NA
VEU66869.1|21738_22194_-|protease	conserved hypothetical metalloprotease	protease	NA	NA	NA	NA
VEU66870.1|22214_22601_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEU66871.1|22575_24639_-	ABC transporter ATP-binding protein	NA	A0A1V0SGN0	Hokovirus	25.8	7.7e-05
VEU66872.1|24771_25218_+	ribose-5-phosphate isomerase	NA	NA	NA	NA	NA
VEU66873.1|25284_25659_+	proline dipeptidase pepQ	NA	A0A1X9I5T8	Streptococcus_phage	45.9	2.7e-17
VEU66874.1|25660_26233_+	putative dephospho-CoA kinase	NA	NA	NA	NA	NA
VEU66875.1|26282_27245_+	DnaD domain-containing protein	NA	NA	NA	NA	NA
VEU66876.1|27258_28152_+	Chromosomal replication initiator protein dnaA	NA	NA	NA	NA	NA
VEU66877.1|28290_29328_+|transposase	transposase	transposase	H7BW61	unidentified_phage	28.0	3.3e-12
VEU66878.1|29606_30122_-	adenine phosphoribosyltransferase (APRT)	NA	NA	NA	NA	NA
VEU66879.1|30151_31957_-	translation initiation factor if-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.5	6.9e-26
VEU66880.1|31935_32250_-	putative transcription termination factor	NA	NA	NA	NA	NA
VEU66881.1|32230_33847_-	N utilization substance protein A	NA	NA	NA	NA	NA
VEU66882.1|33856_34291_-	Uncharacterised BCR, YhbC family COG0779	NA	NA	NA	NA	NA
VEU66883.1|34415_35411_-	Bifunctional oligoribonuclease and PAP phosphatase nrnA	NA	NA	NA	NA	NA
VEU66884.1|35410_36379_-	Bifunctional oligoribonuclease and PAP phosphatase nrnA	NA	NA	NA	NA	NA
VEU66885.1|36701_38555_+	glucose inhibited division protein A	NA	NA	NA	NA	NA
VEU66886.1|38547_38994_+	ribosomal RNA large subunit methyltransferase h	NA	NA	NA	NA	NA
VEU66887.1|39028_39469_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEU66888.1|39586_39943_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
VEU66889.1|39932_40634_-|tRNA	tRNA (guanine-N(1)-)-methyltransferase	tRNA	NA	NA	NA	NA
VEU66890.1|40647_41094_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
VEU66891.1|41333_42200_+	Als operon repressor	NA	NA	NA	NA	NA
VEU66892.1|42210_43188_+	Ribosome-binding factor A	NA	NA	NA	NA	NA
VEU66893.1|43239_44589_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEU66894.1|44712_44943_-	Sigma-70, region 4	NA	NA	NA	NA	NA
VEU66895.1|44935_46003_-	signal recognition particle-docking protein FtsY	NA	D6PHS7	uncultured_phage	26.8	4.6e-09
VEU66896.1|46089_48399_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEU66897.1|48388_51379_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEU66898.1|51424_51712_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEU66899.1|51748_53446_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEU66900.1|53438_54140_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.9	2.1e-23
VEU66901.1|54353_54722_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEU66902.1|54739_55453_+|transposase	transposase	transposase	H7BW47	unidentified_phage	39.3	1.1e-22
VEU66903.1|55655_56354_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
VEU66904.1|56366_57389_-	Uncharacterised protein family UPF0052	NA	NA	NA	NA	NA
VEU66905.1|57420_58707_-	putative glucosyl-3-phosphoglycerate synthase	NA	NA	NA	NA	NA
VEU66906.1|59112_59520_-|transposase	transposase	transposase	H7BWC8	unidentified_phage	29.9	4.4e-05
VEU66907.1|59474_60401_-|transposase	transposase	transposase	NA	NA	NA	NA
VEU66908.1|60439_61432_-	UDP-glucose 4-epimerase	NA	A0A2K9L5H6	Tupanvirus	38.0	2.5e-49
VEU66909.1|61444_62452_-	Chondroitin polymerase	NA	NA	NA	NA	NA
VEU66910.1|62601_63483_-	esterase/lipase	NA	NA	NA	NA	NA
VEU66911.1|63492_64476_-	Lipoate-protein ligase A	NA	A0A2H4UVX5	Bodo_saltans_virus	30.3	1.0e-18
VEU66912.1|65159_67760_+	PTS system, glucose/glucosamine/beta-glucoside-specific, IICBA component	NA	NA	NA	NA	NA
VEU66913.1|67852_68578_+	bacterial surface protein 26-residue repeat	NA	NA	NA	NA	NA
VEU66914.1|68698_69535_-|transposase	transposase, IS861	transposase	A0A1B1P773	Bacillus_phage	43.0	3.6e-46
>prophage 2
LR215003	Mycoplasma conjunctivae strain NCTC10147 genome assembly, plasmid: 7	594555	233796	253677	594555		Mycoplasma_phage(100.0%)	20	NA	NA
VEU67056.1|233796_235170_+	multiple sugar ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	100.0	2.4e-119
VEU67057.1|235153_235972_+	polyamine (spermidine/putrescine) ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	100.0	1.1e-140
VEU67058.1|235986_236841_+	spermidine/putrescine ABC transporter membrane protein	NA	Q6GZ01	Mycoplasma_phage	99.6	5.4e-154
VEU67059.1|236806_238348_+	Uncharacterised protein	NA	Q6GZ00	Mycoplasma_phage	99.4	2.1e-302
VEU67060.1|238477_238918_+	Uncharacterised protein	NA	NA	NA	NA	NA
VEU67061.1|239403_240258_+	repb	NA	O80239	Mycoplasma_phage	35.4	3.6e-33
VEU67062.1|240420_240582_+	Uncharacterised protein	NA	A4D0G2	Mycoplasma_phage	98.1	1.5e-17
VEU67063.1|240585_241386_+	Uncharacterised protein	NA	O80242	Mycoplasma_phage	43.1	1.2e-46
VEU67064.1|241517_241832_+	Uncharacterised protein	NA	Q5QGL9	Mycoplasma_phage	99.0	1.6e-55
VEU67065.1|241819_243502_+	Uncharacterised protein	NA	Q5QGL8	Mycoplasma_phage	100.0	0.0e+00
VEU67066.1|243482_244640_+	Uncharacterised protein	NA	Q5QGL7	Mycoplasma_phage	100.0	1.8e-221
VEU67067.1|244641_246489_+	Uncharacterised protein	NA	Q5QGL6	Mycoplasma_phage	100.0	0.0e+00
VEU67068.1|246530_247061_+	Uncharacterised protein	NA	Q5QGL5	Mycoplasma_phage	100.0	1.5e-74
VEU67069.1|247196_248066_+	Uncharacterised protein	NA	Q5QGL4	Mycoplasma_phage	99.7	7.2e-162
VEU67070.1|248068_249484_+	Uncharacterised protein	NA	Q5QGL3	Mycoplasma_phage	100.0	1.1e-271
VEU67071.1|249500_250886_+	Uncharacterised protein	NA	Q5QGL2	Mycoplasma_phage	100.0	5.7e-262
VEU67072.1|251179_251827_+	mem	NA	Q5QGL0	Mycoplasma_phage	100.0	1.2e-68
VEU67073.1|251886_252978_-	Site-specific recombinase XerD	NA	NA	NA	NA	NA
VEU67074.1|253029_253197_-	Uncharacterised protein	NA	NA	NA	NA	NA
VEU67075.1|253215_253677_-	Uncharacterised protein	NA	Q5QGK8	Mycoplasma_phage	97.4	5.6e-81
>prophage 3
LR215003	Mycoplasma conjunctivae strain NCTC10147 genome assembly, plasmid: 7	594555	583999	594527	594555		Mycoplasma_phage(100.0%)	15	NA	NA
VEU67389.1|583999_584461_+	Uncharacterised protein	NA	Q5QGK8	Mycoplasma_phage	100.0	5.4e-84
VEU67390.1|584697_585789_+	Site-specific recombinase XerD	NA	NA	NA	NA	NA
VEU67391.1|585848_586496_-	mem	NA	Q5QGL0	Mycoplasma_phage	100.0	1.2e-68
VEU67392.1|586789_588175_-	Uncharacterised protein	NA	Q5QGL2	Mycoplasma_phage	100.0	5.7e-262
VEU67393.1|588191_589607_-	Uncharacterised protein	NA	Q5QGL3	Mycoplasma_phage	100.0	1.1e-271
VEU67394.1|589609_590602_-	Uncharacterised protein	NA	Q5QGL4	Mycoplasma_phage	100.0	5.3e-185
VEU67395.1|590614_590998_-	Uncharacterised protein	NA	Q5QGL5	Mycoplasma_phage	99.2	1.0e-48
VEU67396.1|591185_591311_-	Uncharacterised protein	NA	Q5QGL6	Mycoplasma_phage	97.4	4.6e-14
VEU67397.1|591289_591901_-	Uncharacterised protein	NA	Q5QGL6	Mycoplasma_phage	100.0	3.6e-112
VEU67398.1|591908_592178_-	Uncharacterised protein	NA	Q5QGL6	Mycoplasma_phage	97.0	5.3e-31
VEU67399.1|592599_593031_-	Uncharacterised protein	NA	Q5QGL6	Mycoplasma_phage	100.0	7.1e-70
VEU67400.1|593032_593299_-	Uncharacterised protein	NA	Q5QGL7	Mycoplasma_phage	100.0	1.3e-42
VEU67401.1|593303_593477_-	Uncharacterised protein	NA	Q5QGL7	Mycoplasma_phage	95.1	1.1e-13
VEU67402.1|593485_594193_-	Uncharacterised protein	NA	Q5QGL7	Mycoplasma_phage	97.4	3.0e-126
VEU67403.1|594173_594527_-	Uncharacterised protein	NA	Q5QGL8	Mycoplasma_phage	100.0	4.9e-61
>prophage 1
LR215005	Mycoplasma conjunctivae strain NCTC10147 genome assembly, plasmid: 9	140673	19649	33113	140673	tRNA	Bacillus_phage(37.5%)	11	NA	NA
VEU67625.1|19649_22220_+	DNA gyrase, A subunit	NA	A0A172JHV7	Bacillus_phage	30.4	1.1e-88
VEU67626.1|22318_22843_+	phosphoesterase	NA	NA	NA	NA	NA
VEU67627.1|22914_23847_+	COF family HAD hydrolase protein	NA	NA	NA	NA	NA
VEU67628.1|23849_24599_+	ribonuclease HII	NA	NA	NA	NA	NA
VEU67629.1|24868_26626_+	chaperone protein DnaK	NA	A0A0G2YAL1	Acanthamoeba_polyphaga_mimivirus	44.9	2.7e-123
VEU67630.1|26814_27492_+	ATPase	NA	A0A127AWE7	Bacillus_phage	32.2	1.0e-22
VEU67631.1|27573_28029_+	ATPase	NA	A0A127AWE7	Bacillus_phage	40.9	5.3e-23
VEU67632.1|28030_28993_+|tRNA	phenylalanyl-tRNA synthetase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	37.0	2.8e-26
VEU67633.1|28982_29654_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	36.0	6.1e-28
VEU67634.1|29655_31842_+|tRNA	Phenylalanine--tRNA ligase beta subunit	tRNA	A0A1L3IZU3	BeAn_58058_virus	41.7	1.8e-15
VEU67635.1|31850_33113_+	Serine hydroxymethyltransferase	NA	A0A240F2Y9	Aeromonas_phage	50.0	3.2e-94
