assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000007085.1_ASM708v1	NC_003869	Caldanaerobacter subterraneus subsp. tengcongensis MB4, complete sequence	1	1673770-1673859	1	CRISPRCasFinder	no	Cas14b_CAS-V-F	Cas14b_CAS-V-F,cas14k,DEDDh,cas3,cas4,csa3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7,csx1,cas10,cas2,cas1,cas5,cas7,cas8b1,cas6,csx15	Unclear	TCAACCCATATAGTAATTTAAAA	23	0	0	NA	NA	NA	1	1	Unclear	Cas14b_CAS-V-F,cas14k,DEDDh,cas3,cas4,csa3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7,csx1,cas10,cas2,cas1,cas5,cas7,cas8b1,cas6,csx15	NA|244aa|up_3|NC_003869.1_1669048_1669780_-,NA|125aa|down_2|NC_003869.1_1676884_1677259_-	NA|611aa|up_9|NC_003869.1_1659775_1661608_-	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|351aa|up_8|NC_003869.1_1661645_1662698_-	PRK05382, PRK05382, chorismate synthase; Validated	NA|414aa|up_7|NC_003869.1_1662699_1663941_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|635aa|up_6|NC_003869.1_1664043_1665948_-	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	Cas14b_CAS-V-F|479aa|up_5|NC_003869.1_1666096_1667533_-	TIGR01765, COG0675:_Transposase_and_inactivated_derivatives, transposase, putative, N-terminal domain	NA|288aa|up_4|NC_003869.1_1668129_1668993_-	TIGR02834, Uncharacterized_protein_YtxC, putative sporulation protein YtxC	NA|244aa|up_3|NC_003869.1_1669048_1669780_-	NA	NA|311aa|up_2|NC_003869.1_1669837_1670770_-	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]	NA|112aa|up_1|NC_003869.1_1670868_1671204_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|56aa|up_0|NC_003869.1_1672083_1672251_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|235aa|down_0|NC_003869.1_1674466_1675171_-	TIGR00035, Aspartate_racemase, aspartate racemase	NA|73aa|down_1|NC_003869.1_1676203_1676422_-	pfam00375, SDF, Sodium:dicarboxylate symporter family	NA|125aa|down_2|NC_003869.1_1676884_1677259_-	NA	NA|42aa|down_3|NC_003869.1_1678239_1678365_-	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated	NA|393aa|down_4|NC_003869.1_1678386_1679565_-	TIGR02358, purine-cytosine_transport_protein, putative hydroxymethylpyrimidine transporter CytX	NA|162aa|down_5|NC_003869.1_1679593_1680079_-	TIGR02359, conserved_hypothetical_protein, energy coupling factor transporter S component ThiW	NA|214aa|down_6|NC_003869.1_1680313_1680955_-	PRK00043, thiE, thiamine phosphate synthase	NA|295aa|down_7|NC_003869.1_1683082_1683967_-	PRK00114, hslO, Hsp33 family molecular chaperone HslO	NA|67aa|down_8|NC_003869.1_1684037_1684238_-	COG1278, CspC, Cold shock proteins [Transcription]	NA|468aa|down_9|NC_003869.1_1684405_1685809_-	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)
GCF_000007085.1_ASM708v1	NC_003869	Caldanaerobacter subterraneus subsp. tengcongensis MB4, complete sequence	2	2326770-2331141	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no		Cas14b_CAS-V-F,cas14k,DEDDh,cas3,cas4,csa3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7,csx1,cas10,cas2,cas1,cas5,cas7,cas8b1,cas6,csx15	Orphan	GTTTTTAGCCTACCTAAAAGGGATTGAAAC,GTTTTTAGCCTACCTAAAAGGGATTGAAAC,GTTTTTAGCCTACCTAAAAGGGATTGAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	65,65,65	65	Orphan	Cas14b_CAS-V-F,cas14k,DEDDh,cas3,cas4,csa3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7,csx1,cas10,cas2,cas1,cas5,cas7,cas8b1,cas6,csx15	NA|48aa|up_0|NC_003869.1_2325432_2325576_+,NA|219aa|down_8|NC_003869.1_2338330_2338987_-	NA|163aa|up_9|NC_003869.1_2316679_2317168_+	TIGR04518, conserved_hypothetical_protein, ECF transporter S component, folate family	NA|193aa|up_8|NC_003869.1_2317226_2317805_-	pfam01955, CbiZ, Adenosylcobinamide amidohydrolase	NA|332aa|up_7|NC_003869.1_2317869_2318865_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|441aa|up_6|NC_003869.1_2319059_2320382_+	pfam02810, SEC-C, SEC-C motif	NA|235aa|up_5|NC_003869.1_2320630_2321335_+	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|309aa|up_4|NC_003869.1_2321373_2322300_-	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|76aa|up_3|NC_003869.1_2322306_2322534_-	pfam11213, DUF3006, Protein of unknown function (DUF3006)	NA|468aa|up_2|NC_003869.1_2322828_2324232_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	NA|191aa|up_1|NC_003869.1_2324635_2325208_-	pfam13408, Zn_ribbon_recom, Recombinase zinc beta ribbon domain	NA|48aa|up_0|NC_003869.1_2325432_2325576_+	NA	NA|389aa|down_0|NC_003869.1_2331668_2332835_-	PRK07682, PRK07682, aminotransferase	NA|163aa|down_1|NC_003869.1_2332831_2333320_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|302aa|down_2|NC_003869.1_2333725_2334631_-	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|138aa|down_3|NC_003869.1_2334673_2335087_-	PRK05807, PRK05807, RNA-binding protein S1	NA|96aa|down_4|NC_003869.1_2335174_2335462_-	pfam04977, DivIC, Septum formation initiator	NA|152aa|down_5|NC_003869.1_2335524_2335980_-	TIGR02893, Spore_protein_YabQ, spore cortex biosynthesis protein YabQ	NA|540aa|down_6|NC_003869.1_2336060_2337680_+	PRK14869, PRK14869, putative manganese-dependent inorganic diphosphatase	NA|211aa|down_7|NC_003869.1_2337683_2338316_-	PRK09552, mtnX, 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed	NA|219aa|down_8|NC_003869.1_2338330_2338987_-	NA	NA|99aa|down_9|NC_003869.1_2339070_2339367_-	TIGR02892, conserved_hypothetical_protein, sporulation protein YabP
GCF_000007085.1_ASM708v1	NC_003869	Caldanaerobacter subterraneus subsp. tengcongensis MB4, complete sequence	3	2537224-2538952	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7,csx1,cas10,cas2,cas1,cas4	Cas14b_CAS-V-F,cas14k,DEDDh,cas3,cas4,csa3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7,csx1,cas10,cas2,cas1,cas5,cas7,cas8b1,cas6,csx15	Type III-D,Type III-A,Type III-B,Type III-C	GTTTCAATCCCTCTTAGGTAGGCTAAAAAC,GTTTCAATCCCTCTTAGGTAGGCTAAAAAC,GTTTTTAGCCTACCTAAGAGGGATTGAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	25,25,25	25	TypeIII-D,TypeIII-A,TypeIII-B,TypeIII-C	Cas14b_CAS-V-F,cas14k,DEDDh,cas3,cas4,csa3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7,csx1,cas10,cas2,cas1,cas5,cas7,cas8b1,cas6,csx15	NA|57aa|up_0|NC_003869.1_2536799_2536970_-,NA	cmr4gr7|350aa|up_9|NC_003869.1_2524875_2525925_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cmr3gr5|378aa|up_8|NC_003869.1_2525917_2527051_-	TIGR01888, Hypothetical_protein_SSO1730, CRISPR type III-B/RAMP module-associated protein Cmr3	cmr1gr7|307aa|up_7|NC_003869.1_2527057_2527978_-	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1	csx1|478aa|up_6|NC_003869.1_2528001_2529435_-	TIGR01897, hypothetical_protein, CRISPR-associated protein, MJ1666 family	NA|456aa|up_5|NC_003869.1_2529620_2530988_+	pfam13610, DDE_Tnp_IS240, DDE domain	NA|428aa|up_4|NC_003869.1_2531728_2533012_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	cas10|910aa|up_3|NC_003869.1_2533120_2535850_-	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B	NA|100aa|up_2|NC_003869.1_2536036_2536336_-	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain	NA|52aa|up_1|NC_003869.1_2536620_2536776_-	pfam04294, VanW, VanW like protein	NA|57aa|up_0|NC_003869.1_2536799_2536970_-	NA	cas2|88aa|down_0|NC_003869.1_2555594_2555858_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|down_1|NC_003869.1_2555922_2556915_-	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas4|169aa|down_2|NC_003869.1_2556950_2557457_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|733aa|down_3|NC_003869.1_2557547_2559746_-	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas5|241aa|down_4|NC_003869.1_2559724_2560447_-	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|324aa|down_5|NC_003869.1_2560443_2561415_-	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP	cas8b1|500aa|down_6|NC_003869.1_2561395_2562895_-	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas6|261aa|down_7|NC_003869.1_2562914_2563697_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	csx15|127aa|down_8|NC_003869.1_2563734_2564115_-	cd09766, Csx15_I-U, CRISPR/Cas system-associated protein Csx15	csx1|297aa|down_9|NC_003869.1_2564143_2565034_-	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1
GCF_000007085.1_ASM708v1	NC_003869	Caldanaerobacter subterraneus subsp. tengcongensis MB4, complete sequence	4	2540585-2555096	3,4,3	PILER-CR,CRISPRCasFinder,CRT	no	cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7,csx1,cas10,cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,cas6,csx15	Cas14b_CAS-V-F,cas14k,DEDDh,cas3,cas4,csa3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7,csx1,cas10,cas2,cas1,cas5,cas7,cas8b1,cas6,csx15	Type III-D,Type III-A,Type III-C,Type III-B,Type I-B	GTTTTTAGCCTACCTAAGAGGGATTGAAAC,GTTTCAATCCCTCTTAGGTAGGCTAAAAAC,GTTTCAATCCCTCTTAGGTAGGCTAAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	216,216,216	216	TypeIII-D,TypeIII-A,TypeIII-C,TypeIII-B,TypeI-B	Cas14b_CAS-V-F,cas14k,DEDDh,cas3,cas4,csa3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7,csx1,cas10,cas2,cas1,cas5,cas7,cas8b1,cas6,csx15	NA|57aa|up_0|NC_003869.1_2536799_2536970_-,NA	cmr4gr7|350aa|up_9|NC_003869.1_2524875_2525925_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cmr3gr5|378aa|up_8|NC_003869.1_2525917_2527051_-	TIGR01888, Hypothetical_protein_SSO1730, CRISPR type III-B/RAMP module-associated protein Cmr3	cmr1gr7|307aa|up_7|NC_003869.1_2527057_2527978_-	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1	csx1|478aa|up_6|NC_003869.1_2528001_2529435_-	TIGR01897, hypothetical_protein, CRISPR-associated protein, MJ1666 family	NA|456aa|up_5|NC_003869.1_2529620_2530988_+	pfam13610, DDE_Tnp_IS240, DDE domain	NA|428aa|up_4|NC_003869.1_2531728_2533012_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	cas10|910aa|up_3|NC_003869.1_2533120_2535850_-	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B	NA|100aa|up_2|NC_003869.1_2536036_2536336_-	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain	NA|52aa|up_1|NC_003869.1_2536620_2536776_-	pfam04294, VanW, VanW like protein	NA|57aa|up_0|NC_003869.1_2536799_2536970_-	NA	cas2|88aa|down_0|NC_003869.1_2555594_2555858_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|down_1|NC_003869.1_2555922_2556915_-	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas4|169aa|down_2|NC_003869.1_2556950_2557457_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|733aa|down_3|NC_003869.1_2557547_2559746_-	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas5|241aa|down_4|NC_003869.1_2559724_2560447_-	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|324aa|down_5|NC_003869.1_2560443_2561415_-	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP	cas8b1|500aa|down_6|NC_003869.1_2561395_2562895_-	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas6|261aa|down_7|NC_003869.1_2562914_2563697_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	csx15|127aa|down_8|NC_003869.1_2563734_2564115_-	cd09766, Csx15_I-U, CRISPR/Cas system-associated protein Csx15	csx1|297aa|down_9|NC_003869.1_2564143_2565034_-	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1
