assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000007485.1_ASM748v1	NC_004572	Tropheryma whipplei str. Twist, complete sequence	1	267626-267710	1	CRISPRCasFinder	no		csa3,DEDDh	Orphan	ACCCAATCCAAAAAATACCGGGACAGACAA	30	1	1	267656-267680	NC_004572.3_268892-268916	NA	1	1	Orphan	csa3,DEDDh	NA|141aa|up_9|NC_004572.3_255495_255918_+,NA|50aa|up_7|NC_004572.3_257756_257906_+,NA|57aa|up_5|NC_004572.3_259338_259509_+,NA|90aa|up_3|NC_004572.3_261821_262091_+,NA|210aa|up_2|NC_004572.3_262517_263147_+,NA|124aa|down_2|NC_004572.3_272520_272892_+	NA|141aa|up_9|NC_004572.3_255495_255918_+	NA	NA|121aa|up_8|NC_004572.3_257319_257682_+	pfam05345, He_PIG, Putative Ig domain	NA|50aa|up_7|NC_004572.3_257756_257906_+	NA	NA|94aa|up_6|NC_004572.3_258402_258684_+	pfam05345, He_PIG, Putative Ig domain	NA|57aa|up_5|NC_004572.3_259338_259509_+	NA	NA|407aa|up_4|NC_004572.3_259505_260726_+	PRK11891, PRK11891, aspartate carbamoyltransferase; Provisional	NA|90aa|up_3|NC_004572.3_261821_262091_+	NA	NA|210aa|up_2|NC_004572.3_262517_263147_+	NA	NA|381aa|up_1|NC_004572.3_263964_265107_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|377aa|up_0|NC_004572.3_265209_266340_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|304aa|down_0|NC_004572.3_269282_270194_+	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning]	NA|212aa|down_1|NC_004572.3_270205_270841_+	pfam01668, SmpB, SmpB protein	NA|124aa|down_2|NC_004572.3_272520_272892_+	NA	NA|1188aa|down_3|NC_004572.3_273068_276632_+	pfam05345, He_PIG, Putative Ig domain	NA|449aa|down_4|NC_004572.3_276628_277975_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|198aa|down_5|NC_004572.3_280118_280712_+	pfam05345, He_PIG, Putative Ig domain	NA|154aa|down_6|NC_004572.3_280656_281118_+	pfam05345, He_PIG, Putative Ig domain	NA|568aa|down_7|NC_004572.3_285099_286803_+	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional	NA|582aa|down_8|NC_004572.3_286847_288593_+	PRK07789, PRK07789, acetolactate synthase 1 catalytic subunit; Validated	NA|81aa|down_9|NC_004572.3_288585_288828_+	cd04878, ACT_AHAS, N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS)
GCF_000007485.1_ASM748v1	NC_004572	Tropheryma whipplei str. Twist, complete sequence	2	511338-511527	1	PILER-CR	no	DEDDh	csa3,DEDDh	Unclear	AGCAGAGCTTGAAGCAGAACTTGCGGGACTTAGGCAA	37	0	0	NA	NA	NA	2	2	Orphan	csa3,DEDDh	NA|559aa|up_0|NC_004572.3_508585_510262_-,NA	NA|516aa|up_9|NC_004572.3_497541_499089_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|185aa|up_8|NC_004572.3_499156_499711_-	pfam09819, ABC_cobalt, ABC-type cobalt transport system, permease component	NA|319aa|up_7|NC_004572.3_500034_500991_+	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family	NA|505aa|up_6|NC_004572.3_501039_502554_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|525aa|up_5|NC_004572.3_502550_504125_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|101aa|up_4|NC_004572.3_504021_504324_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|629aa|up_3|NC_004572.3_504462_506349_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|360aa|up_2|NC_004572.3_506335_507415_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|384aa|up_1|NC_004572.3_507437_508589_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|559aa|up_0|NC_004572.3_508585_510262_-	NA	NA|360aa|down_0|NC_004572.3_511987_513067_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|313aa|down_1|NC_004572.3_513050_513989_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|739aa|down_2|NC_004572.3_514016_516233_-	TIGR02696, polyribonucleotide_nucleotidyltransferase, guanosine pentaphosphate synthetase I/polynucleotide phosphorylase	NA|91aa|down_3|NC_004572.3_516268_516541_-	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|95aa|down_4|NC_004572.3_516712_516997_-	pfam02823, ATP-synt_DE_N, ATP synthase, Delta/Epsilon chain, beta-sandwich domain	NA|475aa|down_5|NC_004572.3_516998_518423_-	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|337aa|down_6|NC_004572.3_518471_519482_-	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|543aa|down_7|NC_004572.3_519501_521130_-	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|263aa|down_8|NC_004572.3_521140_521929_-	PRK13430, PRK13430, F0F1 ATP synthase subunit delta; Provisional	NA|173aa|down_9|NC_004572.3_521918_522437_-	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated
