assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000010125.1_ASM1012v1	NC_007350	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292, complete genome	1	280481-280578	1	CRISPRCasFinder	no		WYL,csa3,DEDDh,cas3,DinG	Orphan	TTGCATAAGAATCACTAAGGAAATT	25	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,cas3,DinG,Cas14u_CAS-V	NA,NA|69aa|down_5|NC_007350.1_286996_287203_+	NA|107aa|up_9|NC_007350.1_270851_271172_+	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|109aa|up_8|NC_007350.1_271182_271509_+	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit	NA|265aa|up_7|NC_007350.1_271742_272537_+	cd13711, PBP2_Ngo0372_TcyA, Substrate binding domain of ABC transporters involved in cystine import; the type 2 periplasmic binding protein fold	NA|240aa|up_6|NC_007350.1_272520_273240_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|244aa|up_5|NC_007350.1_273236_273968_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|306aa|up_4|NC_007350.1_274921_275839_-	PRK12921, PRK12921, oxidoreductase	NA|252aa|up_3|NC_007350.1_276052_276808_+	pfam02517, Abi, CAAX protease self-immunity	NA|273aa|up_2|NC_007350.1_277149_277968_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|311aa|up_1|NC_007350.1_278011_278944_+	cd05290, LDH_3, A subgroup of L-lactate dehydrogenases	NA|357aa|up_0|NC_007350.1_279109_280180_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|430aa|down_0|NC_007350.1_280585_281875_-	COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]	NA|302aa|down_1|NC_007350.1_282092_282998_+	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase	NA|382aa|down_2|NC_007350.1_282994_284140_+	PRK07671, PRK07671, bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA|185aa|down_3|NC_007350.1_285620_286175_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|157aa|down_4|NC_007350.1_286348_286819_-	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|69aa|down_5|NC_007350.1_286996_287203_+	NA	NA|281aa|down_6|NC_007350.1_287289_288132_-	COG0829, UreH, Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones]	NA|205aa|down_7|NC_007350.1_288132_288747_-	cd05540, UreG, urease accessory protein UreG	NA|230aa|down_8|NC_007350.1_288760_289450_-	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]	NA|151aa|down_9|NC_007350.1_289442_289895_-	PRK13261, ureE, urease accessory protein UreE; Provisional
GCF_000010125.1_ASM1012v1	NC_007351	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 plasmid pSSP1, complete sequence	1	22123-22271	1	CRISPRCasFinder	no	csa3,Cas14u_CAS-V	csa3,Cas14u_CAS-V	Type I-A	ACATGTAACATGTTACTGCAAAACTTTGTTTCTTTCAACTTATACATAATCTC	53	1	2	22176-22218|22176-22218	NC_007351.1_22367-22409|NC_007351.1_22653-22695	NA	1	1	TypeI-A	WYL,csa3,DEDDh,cas3,DinG,Cas14u_CAS-V	NA|45aa|up_2|NC_007351.1_20786_20921_+,NA|93aa|down_2|NC_007351.1_24910_25189_+	csa3|105aa|up_9|NC_007351.1_14918_15233_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|555aa|up_8|NC_007351.1_15229_16894_-	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase	NA|577aa|up_7|NC_007351.1_16890_18621_-	TIGR04291, Arsenical_pump-driving_ATPase, arsenical pump-driving ATPase	NA|116aa|up_6|NC_007351.1_18601_18949_-	pfam06953, ArsD, Arsenical resistance operon trans-acting repressor ArsD	NA|65aa|up_5|NC_007351.1_19233_19428_+	PRK00955, PRK00955, YgiQ family radical SAM protein	csa3|107aa|up_4|NC_007351.1_19477_19798_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|295aa|up_3|NC_007351.1_19888_20773_+	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|45aa|up_2|NC_007351.1_20786_20921_+	NA	NA|67aa|up_1|NC_007351.1_21056_21257_-	COG3905, COG3905, Predicted transcriptional regulator [Transcription]	NA|265aa|up_0|NC_007351.1_21262_22057_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|422aa|down_0|NC_007351.1_22984_24250_+	pfam06970, RepA_N, Replication initiator protein A (RepA) N-terminus	Cas14u_CAS-V|226aa|down_1|NC_007351.1_24215_24893_+	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain	NA|93aa|down_2|NC_007351.1_24910_25189_+	NA	NA|225aa|down_3|NC_007351.1_25890_26565_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|90aa|down_4|NC_007351.1_26787_27057_-	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system	NA|83aa|down_5|NC_007351.1_27057_27306_-	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|333aa|down_6|NC_007351.1_27613_28612_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|256aa|down_7|NC_007351.1_28611_29379_-	PRK00208, thiG, thiazole synthase; Reviewed	NA|67aa|down_8|NC_007351.1_29380_29581_-	PRK11840, PRK11840, bifunctional sulfur carrier protein/thiazole synthase protein; Provisional	NA|371aa|down_9|NC_007351.1_29570_30683_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
